Pregenerated sensors for C2CD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030279Ensembl transcript IDs: ENSMUST00000087485.7, ENSMUST00000111758.9, ENSMUST00000171349.8, ENSMUST00000203187.3, ENSMUST00000203673.3, ENSMUST00000204043.2, ENSMUST00000204140.2, ENSMUST00000204655.3, ENSMUST00000205119.3
Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATATGAAGCAACGGCCAGTCGTGAGGTGCCCCCTCCCTCCTCCATaGGGACAGCCAGTCCTGAGGCATCCTCCGCTCCTGGGTGCGGAC | + |
|
Preference number: 1 (lower is better) Translates to: NMKQRPVVRCPLPPP*GQPVLRHPPLLGAD Trigger: GTCCGCACCCAGGAGCGGAGGATGCCTCAGGACTGGCTGTCCTCATGGAGGAGGGAGGGGGCACCTCACGACTGGCCGTTGCTTCATATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | TCTCAACTCTCCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTaGTCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SQLSQMCTQAIQPHP*SSVPHPTPGLWAEK Trigger: CTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGGAGAGTTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | GCATCCCTGCTCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAATGGAGACACATGAATTTCACTCGG | + |
|
Preference number: 1 (lower is better) Translates to: ASLLLSTPPHAGPLG*EEGDTQWRHMNFTR Trigger: CCGAGTGAAATTCATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGAGCAGGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | CGGTACATGAGGGCTGGCAGTTGGCAGCAGGCTGCTGAGATGACATaGCCTCTAAGTCGGAGTCACGAACAAACACCACCGCGTCCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: RYMRAGSWQQAAEMT*PLSRSHEQTPPRPH Trigger: GTGGGGACGCGGTGGTGTTTGTTCGTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | TGCATGCAGGAAGGAACGCTGCTGGGCTGCTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTCGGACCACTAACCCAGACTCGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: CMQEGTLLGCSVYPE*TPFLWLGPLTQTRP Trigger: AGGGCGAGTCTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | GTTCTCTGGATGGGGAGCTGCATGCAGGAAGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGCACGCCGTTCCTATGGCTCGGACCA | + |
|
Preference number: 1 (lower is better) Translates to: VLWMGSCMQEGTLLG*SVYPECTPFLWLGP Trigger: TGGTCCGAGCCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | ACGCTGCTGGGCTGCTCAGTTTATCCAGAGTGCACGCCGTTCCTATaGCTCGGACCACTAACCCAGACTCGCCCTCCAGATCAAAGCACT | + |
|
Preference number: 1 (lower is better) Translates to: TLLGCSVYPECTPFL*LGPLTQTRPPDQST Trigger: AGTGCTTTGATCTGGAGGGCGAGTCTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | GTAACTTCTCCGGTACATGAGGGCTGGCAGTTGGCAGCAGGCTGCTaGGATGACATGACCTCTAAGTCGGAGTCACGAACAAACACCACC | + |
|
Preference number: 1 (lower is better) Translates to: VTSPVHEGWQLAAGC*DDMTSKSESRTNTT Trigger: GGTGGTGTTTGTTCGTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | TTCTCTTCAATCCTTTGTTCCAAACAGCCCTCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGCACAGCTGCCGTGCCAGACGCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: FSSILCSKQPSTVPS*RNRGFSTAAVPDAD Trigger: ATCAGCGTCTGGCACGGCAGCTGTGCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CCGGTAAATTCTCTTCAATCCTTTGTTCCAAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAGGGTTCAGCACAGCTGCCGTGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PVNSLQSFVPNSPPQ*LPAETEGSAQLPCQ Trigger: CTGGCACGGCAGCTGTGCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAATTTACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | ACACTGCTTCATGATGTAGGACACAACAGCATTCCCGCCCAGCGCTaGCACGTGAGCTCGGACCATGGCAAACACTTCAGCAATGAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: TLLHDVGHNSIPAQR*HVSSDHGKHFSNES Trigger: GCTTTCATTGCTGAAGTGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCCTACATCATGAAGCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | ATGGCTCGGACCACTAACCCAGACTCGCCCTCCAGATCAAAGCACTaGAAGTACCCAACAACTGCATTCCCTCTCATCTCGAGGACTTTC | + |
|
Preference number: 1 (lower is better) Translates to: MARTTNPDSPSRSKH*KYPTTAFPLISRTF Trigger: GAAAGTCCTCGAGATGAGAGGGAATGCAGTTGTTGGGTACTTGCAGTGCTTTGATCTGGAGGGCGAGTCTGGGTTAGTGGTCCGAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CTCATTGAAGGGAATCTCCTTCAGTTCTCTGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGGGCTGCTCAGTTTATCCAGAGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: LIEGNLLQFSGWGAA*RKERCWAAQFIQSA Trigger: TGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGATTCCCTTCAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CAGCTGCCGTGCCAGACGCTGATAAAATACAGACTTCTTCACAGATaGTGGTTGACTCGCTGTAGCCCACTACAGCATGGCAGCCTAAGG | + |
|
Preference number: 1 (lower is better) Translates to: QLPCQTLIKYRLLHR*WLTRCSPLQHGSLR Trigger: CCTTAGGCTGCCATGCTGTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGTCTGGCACGGCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CCACAGTGCCTTCCTGCAGAAACCGAGGGTTCAGCACAGCTGCCGTaGCAGACGCTGATAAAATACAGACTTCTTCACAGATGCTGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: PQCLPAETEGSAQLP*QTLIKYRLLHRCWL Trigger: CAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGTCTGGCACGGCAGCTGTGCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | CATCAGAACTTTCCGACTGTGATCTTAGAAGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATCCTATCATCTCCTCAGACACCTCCG | + |
|
Preference number: 1 (lower is better) Translates to: HQNFPTVILEVWSAV*VLGWGILSSPQTPP Trigger: CGGAGGTGTCTGAGGAGATGATAGGATCCCCCATCCCAGAACCCAGACAGCGCTCCAGACTTCTAAGATCACAGTCGGAAAGTTCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | AAGCGGCGTCATCTTAACAACCCCAACTGTGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAAATTTCCATCACCCATGGCACTTGC | + |
|
Preference number: 1 (lower is better) Translates to: KRRHLNNPNCGTCTR*SRAIPEISITHGTC Trigger: GCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGGTTGTTAAGATGACGCCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | CTGCCGTGCCAGACGCTGATAAAATACAGACTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCACTACAGCATGGCAGCCTAAGGCTT | + |
|
Preference number: 1 (lower is better) Translates to: LPCQTLIKYRLLHRC*LTRCSPLQHGSLRL Trigger: AAGCCTTAGGCTGCCATGCTGTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGTCTGGCACGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | CTGGCTTCATTCGATGCCCTTGGGGTGCGGATCCGATCAATCCACTaGTACTCGGGATCCTCATTGACCACAAGTTCTTCTACAAATCCG | + |
|
Preference number: 1 (lower is better) Translates to: LASFDALGVRIRSIH*YSGSSLTTSSSTNP Trigger: CGGATTTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGTATCAGTGGATTGATCGGATCCGCACCCCAAGGGCATCGAATGAAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CCCAGACTCGCCCTCCAGATCAAAGCACTGCAAGTACCCAACAACTaGATTCCCTCTCATCTCGAGGACTTTCAAGCCAATCTTTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: PRLALQIKALQVPNN*IPSHLEDFQANLSL Trigger: CAGAGAAAGATTGGCTTGAAAGTCCTCGAGATGAGAGGGAATGCAGTTGTTGGGTACTTGCAGTGCTTTGATCTGGAGGGCGAGTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CCAATCTTTCTCTGTAATTCACCTGACATCAAGGAGATGAGTCTCTaGCTGGCTTCATTCGATGCCCTTGGGGTGCGGATCCGATCAATC | + |
|
Preference number: 1 (lower is better) Translates to: PIFLCNSPDIKEMSL*LASFDALGVRIRSI Trigger: GATTGATCGGATCCGCACCCCAAGGGCATCGAATGAAGCCAGGCAGAGACTCATCTCCTTGATGTCAGGTGAATTACAGAGAAAGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | GATGAAAGAAAGCGGCGTCATCTTAACAACCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCAT | + |
|
Preference number: 1 (lower is better) Translates to: DERKRRHLNNPNCGT*TRWSRAIPEISITH Trigger: ATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGGTTGTTAAGATGACGCCGCTTTCTTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | ACGAACAAACACCACCGCGTCCCCACTGACATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTTCTCCATGAAGACACACTGCTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: TNKHHRVPTDIYETL*LVLTGVLHEDTLLH Trigger: ATGAAGCAGTGTGTCTTCATGGAGAACCCCAGTAAGAACCAGGCACAGTGTCTCATAAATGTCAGTGGGGACGCGGTGGTGTTTGTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | TTGCACAAGGTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCATaGCACTTGCTTTTTCAACAGTCACAGCTCTCTGTGCAGCTGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LHKVEQSDSGNFHHP*HLLFQQSQLSVQLV Trigger: TACCAGCTGCACAGAGAGCTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | GACAAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTaGACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: DKQNVKIRNSQLSQM*TQAIQPHPCSSVPH Trigger: GTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | ACCTGGATTAACTCATCTTCAGGCAGAGACACTGTAAAGTTCACATaGCAGAGGCAGCAGGGGGTCATGGACCGAAGTTTGAAATACAGG | + |
|
Preference number: 1 (lower is better) Translates to: TWINSSSGRDTVKFT*QRQQGVMDRSLKYR Trigger: CCTGTATTTCAAACTTCGGTCCATGACCCCCTGCTGCCTCTGCCATGTGAACTTTACAGTGTCTCTGCCTGAAGATGAGTTAATCCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | ACTTGCTTTTTCAACAGTCACAGCTCTCTGTGCAGCTGGTATACCTaGGTTAGAGTTCGCACTCTCCAGGTGTTCTTTAGCTGCTGGGAA | + |
|
Preference number: 1 (lower is better) Translates to: TCFFNSHSSLCSWYT*VRVRTLQVFFSCWE Trigger: TTCCCAGCAGCTAAAGAACACCTGGAGAGTGCGAACTCTAACTCAGGTATACCAGCTGCACAGAGAGCTGTGACTGTTGAAAAAGCAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CCGAATGAAAAACATGTTAATGATGCCGAGGTACTTGGTTATCTTTaGTCCAGGGATGAAAGAAAGCGGCGTCATCTTAACAACCCCAAC | + |
|
Preference number: 1 (lower is better) Translates to: PNEKHVNDAEVLGYL*SRDERKRRHLNNPN Trigger: GTTGGGGTTGTTAAGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGATAACCAAGTACCTCGGCATCATTAACATGTTTTTCATTCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | TCAGGCAATTCTACAGACCCACACCGTAAACCTTCCTTTAAAAGATaGTCTAACACACTACCCATCCAGCTAACAAACACATCACCCATC | + |
|
Preference number: 1 (lower is better) Translates to: SGNSTDPHRKPSFKR*SNTLPIQLTNTSPI Trigger: GATGGGTGATGTGTTTGTTAGCTGGATGGGTAGTGTGTTAGACCATCTTTTAAAGGAAGGTTTACGGTGTGGGTCTGTAGAATTGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | ATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGACACTaGGAAAGCTGCAGTCATTCTCTGAAAATACACACAAGTTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: ITHPANKVLTSSRRH*ESCSHSLKIHTSFL Trigger: GAGGAAACTTGTGTGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | TTGAGCAAGTTCTCACATAGGCCGTTGAAGTTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTACTTAGTCTGACCACTCTTACTGAC | + |
|
Preference number: 1 (lower is better) Translates to: LSKFSHRPLKFLLRA*LVKLRLLSLTTLTD Trigger: GTCAGTAAGAGTGGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGGCCTATGTGAGAACTTGCTCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 90 bp | GTATTTTCACTACTTAAATACATTCCACAGCAGTCTCTCCCCTGTTaGAGCCAAGCCTCTTCTAGACAATTAAATATGAAGCAACGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: VFSLLKYIPQQSLPC*SQASSRQLNMKQRP Trigger: TGGCCGTTGCTTCATATTTAATTGTCTAGAAGAGGCTTGGCTCCAACAGGGGAGAGACTGCTGTGGAATGTATTTAAGTAGTGAAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR TCA 90 bp | AGAGAACATCAGGGACTTTTTGCTTCCTGCAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCATGTTCAGTTCATCATATGGTATAT | + |
|
Preference number: 1 (lower is better) Translates to: REHQGLFASCSYSNM*DERETACSVHHMVY Trigger: ATATACCATATGATGAACTGAACATGCCGTTTCCCGCTCATCTCACATATTGCTATAACTGCAGGAAGCAAAAAGTCCCTGATGTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 90 bp | CTTCTATACCAACAGTGTACCTCACCAATCCCTAAGATTATTGAGTaGAATATATCATTAGAAAACAATCCTGTTCTTCCTAGGTCAACT | + |
|
Preference number: 1 (lower is better) Translates to: LLYQQCTSPIPKIIE*NISLENNPVLPRST Trigger: AGTTGACCTAGGAAGAACAGGATTGTTTTCTAATGATATATTGCACTCAATAATCTTAGGGATTGGTGAGGTACACTGTTGGTATAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAAGGAAGGCCGTCAGGGTaGGGAACGGGAACTCCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: GHNSIPAQRCHVSSDHGKGRPSG*GTGTPA Trigger: AGCGGGAGTTCCCGTTCCTCACCCTGACGGCCTTCC...TTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCGCTGTCTGGGTTCTGGGATGGGGGATCCTATCATCTCCTCAGACACCTCCGGGGTGCGGACACCTCTaGGAAGTTCCTGAGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: SAVWVLGWGILSSPQTPPGCGHL*EVPEST Trigger: AGTGCTCTCAGGAACTTCTCAGAGGTGTCCGCACCC...CGGAGGTGTCTGAGGAGATGATAGGATCCCCCATCCCAGAACCCAGACAGCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | GGACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACAGTCTCTCCCCTGTTaGAGCCAAGCCTCTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GHNSIPAQRCHVSSDHGKQSLPC*SQASSR Trigger: TCTAGAAGAGGCTTGGCTCCAACAGGGGAGAGACTG...TTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACATGTTCCAACGCCGACTaGGTCTGTTGCCGTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TQQHSRPALPRELGPWQTCSNAD*VCCRKR Trigger: CCTTTTACGGCAACAGACGCAGTCGGCGTTGGAACA...TGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GHNSIPAQRCHVSSDHGKLLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...TTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAACGGCAAGAGATTACTGATAGCTGTGGCATTGGCTTCTGCCTGTGCTTTGAGGACAGCCAGTCCTaGGGCATCCTCCGCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HKRQEITDSCGIGFCLCFEDSQS*GILRSW Trigger: CCAGGAGCGGAGGATGCCTCAGGACTGGCTGTCCTC...AAAGCACAGGCAGAAGCCAATGCCACAGCTATCAGTAATCTCTTGCCGTTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGACCCACGCCGGGCCTCTaGGCTGAGAAGAGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: PANKHITHPANKVLTSSRPTPGL*AEKRVT Trigger: TGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGG...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGAAAACCACTGACTCCGCCTTCCTCGCGGAGAGAAGTGGTTTCCCGAATGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VEKTTDSAFLAERSGFPNVWVLG*GILSSP Trigger: AGGAGATGATAGGATCCCCCATCCCAGAACCCAGAC...ATTCGGGAAACCACTTCTCTCCGCGAGGAAGGCGGAGTCAGTGGTTTTCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: PESMGPVCVDWTNKMSRSAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: PANKHITHPANKVLTSSRAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACAGGCAAAGGAGGAATTTaGTATCTCATTAGTAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TQQHSRPALPRELGPWQTGKGGI*YLISSG Trigger: CCCACTACTAATGAGATAGCAAATTCCTCCTTTGCC...TGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACCCACGCCGGGCCTCTaGGCTGAGAAGAGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEPTPGL*AEKRVT Trigger: TGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTACTGTAAAGTTCACATaGCAGAGGCAGCAGGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSTVKFT*QRQQGV Trigger: GACCCCCTGCTGCCTCTGCCATGTGAACTTTACAGT...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCGCTGTCTGGGTTCTGGGATGGGGGATCCTATCATCTCCTCAGACACCTCCGGCTGCAGTCATTCTCTaGAAATACACACAAGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SAVWVLGWGILSSPQTPPAAVIL*KYTQVS Trigger: GGAAACTTGTGTGTATTTTCAGAGAATGACTGCAGC...CGGAGGTGTCTGAGGAGATGATAGGATCCCCCATCCCAGAACCCAGACAGCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACACCCACGCCGGGCCTCTaGGCTGAGAAGAGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: PHFKQKTLRKLQSFSENTPTPGL*AEKRVT Trigger: TGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGG...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCCCACGCCGGGCCTCTaGGCTGAGAAGAGGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: HKLQITPITEGTRIHGACPTPGL*AEKRVT Trigger: TGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: HKLQITPITEGTRIHGACAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: PHFKQKTLRKLQSFSENTAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: KLQITPITEGTRIHGACLAGPLG*EEGDTQ Trigger: TTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGC...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTGATTTCTGCCCACCATaGATCTCGAGTTTCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSDFCPP*ISSFWF Trigger: GAACCAGAAACTCGAGATGCATGGTGGGCAGAAATC...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CACAAGGTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCATGGCACTTGCTTGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HKVEQSDSGNFHHPWHLLVILEV*SAVWVL Trigger: CAGAACCCAGACAGCGCTCCAGACTTCTAAGATCAC...AAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 90 bp | GTAAAGTTCACATGGCAGAGGCAGCAGGGGGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGCAAGTTCTCACATAGGCCGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VKFTWQRQQGVMDRS*KYRLLSKFSHRPLK Trigger: CTTCAACGGCCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGACCCCCTGCTGCCTCTGCCATGTGAACTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTTCAAGCAGAAGACACTaGGAAAGCTGCAGTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSSSRRH*ESCSHS Trigger: AGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGA...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGAACTGCAGCAGTTCTTCGTTATCTGTGGAGGCTCTTTGTAGTGACTTTTCAGAGGGTCCTGATGAGTaGGTATTGGGGTTGGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: GNCSSSSLSVEALCSDFSEGPDE*VLGLGS Trigger: GGATCCCAACCCCAATACTCACTCATCAGGACCCTC...TGAAAAGTCACTACAAAGAGCCTCCACAGATAACGAAGAACTGCTGCAGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSSYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTTCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGGGCTGAGAAGAGGGTaGCACACAATGGAGACACAT | + |
|
Preference number: 2 (lower is better) Translates to: PANKHITHPANKVLTSSRGLRRG*HTMETH Trigger: ATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGGCTGCAGTCATTCTCTaGAAATACACACAAGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DTSEKFLRALRQFYRPTPAAVIL*KYTQVS Trigger: GGAAACTTGTGTGTATTTTCAGAGAATGACTGCAGC...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSESEQSSSGNCSSSSLSTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GCATGTGACTTTATCTCTTGTCTGATTTCTGCCCACCATGCATCTCGAGTTTCTTCGATGCCCTTGGGGTaGGGATCCGATCAATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: ACDFISCLISAHHASRVSSMPLG*GSDQST Trigger: AGTGGATTGATCGGATCCGCACCCCAAGGGCATCGA...AGAAACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGTCACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR GCA 90 bp | GCATGTGACTTTATCTCTTGTCTGATTTCTGCCCACCATGCATCTCGAGTTTCTTGCAGGAAGGAACGCTaGTGGGCTGCTCAGTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: ACDFISCLISAHHASRVSCRKER*WAAQFI Trigger: GATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCA...AGAAACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGTCACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGGGACTCATTAGCAATTaGATTCCTGCTTGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: DTSEKFLRALRQFYRPTPGLISN*IPAWFS Trigger: TGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCC...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACAGTCTCTCCCCTGTTaGAGCCAAGCCTCTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEQSLPC*SQASSR Trigger: TCTAGAAGAGGCTTGGCTCCAACAGGGGAGAGACTG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SIFKSPFHLLYQQCTSPIGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 90 bp | GTCTGTGGGCAGATCGATAGTTGTGAAGAGAACATCAGGGACTTTTaGCTTCCTGCAGTTATAGCAATATGTGAGATGAGCGGGAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: VCGQIDSCEENIRDF*LPAVIAICEMSGKR Trigger: CCGTTTCCCGCTCATCTCACATATTGCTATAACTGCAGGAAGCAAAAAGTCCCTGATGTTCTCTTCACAACTATCGATCTGCCCACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGGGCTGAGAAGAGGGTaGCACACAATGGAGACACAT | + |
|
Preference number: 2 (lower is better) Translates to: HKLQITPITEGTRIHGACGLRRG*HTMETH Trigger: ATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAGGGCTGAGAAGAGGGTaGCACACAATGGAGACACAT | + |
|
Preference number: 2 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQGLRRG*HTMETH Trigger: ATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCC...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACCTCTGAGAAGTTCCTaGGAGCACTCAGGCAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEPLRSS*EHSGNS Trigger: AGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAACAGTCTCTCCCCTGTTaGAGCCAAGCCTCTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQQSLPC*SQASSR Trigger: TCTAGAAGAGGCTTGGCTCCAACAGGGGAGAGACTG...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAACTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQLLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGGCTGAGAAGAGGGTaGCACACAATGGAGACACAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLGLRRG*HTMETH Trigger: ATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGGGCTGAGAAGAGGGTaGCACACAATGGAGACACAT | + |
|
Preference number: 2 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAGLRRG*HTMETH Trigger: ATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAATCAAGCAGAAGACACTaGGAAAGCTGCAGTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAESSRRH*ESCSHS Trigger: AGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGA...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAGGTTGGGATCCTCATTaGAGGGAATCTCCTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQGWDPH*RESPSV Trigger: AACTGAAGGAGATTCCCTTCAATGAGGATCCCAACC...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAATGCCCATTCCAGTCTTaGGTGTCAAACTCAAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAECPFQS*VSNSNL Trigger: CAGATTTGAGTTTGACACCCAAGACTGGAATGGGCA...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 90 bp | TCACATAGGCCGTTGAAGTTCTTATTGAGAGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACCACTCTTACTGACGTGAACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHRPLKFLLRAWLVK*RLLSLTTLTDVNIC Trigger: ACAGATGTTCACGTCAGTAAGAGTGGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGGCCTATGTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 90 bp | GAAGTGGTTTCCCGAATGAAAAACATGTTAATGATGCCGAGGTACTaGGTTATCTTTGCTCCAGGGATGAAAGAAAGCGGCGTCATCTTA | + |
|
Preference number: 2 (lower is better) Translates to: EVVSRMKNMLMMPRY*VIFAPGMKESGVIL Trigger: TAAGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGATAACCAAGTACCTCGGCATCATTAACATGTTTTTCATTCGGGAAACCACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGACCTGTCTGTGTAGACTaGACAAACAAAATGTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PANKHITHPANKVLTSSRPVCVD*TNKMSR Trigger: TCTTGACATTTTGTTTGTCCAGTCTACACAGACAGG...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCAATTGGATTCCTGCTTaGTTTTCAAAGCCACAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPNWIPA*FSKPQE Trigger: CTCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATT...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR CAA 90 bp | CGAAGTTTGAAATACAGGCTCTTGAGCAAGTTCTCACATAGGCCGTaGAAGTTCTTATTGAGAGCTTGGTTAGTCAAGTTGAGGCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: RSLKYRLLSKFSHRP*KFLLRAWLVKLRLL Trigger: AAGTAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGGCCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAAACTTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATCATATGGTATATGGCAGAATCCGCAGCCCACCGGTAAATTCTCTTCAAGAATTTAACTCCACATaGAGACTGTCTGAACCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VHHMVYGRIRSPPVNSLQEFNST*RLSEPV Trigger: AACAGGTTCAGACAGTCTTCATGTGGAGTTAAATTC...TTGAAGAGAATTTACCGGTGGGCTGCGGATTCTGCCATATACCATATGATGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCAATTGGATTCCTGCTTaGTTTTCAAAGCCACAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SIFKSPFHLLYQQCTSPINWIPA*FSKPQE Trigger: CTCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATT...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGGACTCATTAGCAATTaGATTCCTGCTTGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEGLISN*IPAWFS Trigger: TGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTAGCATGTGACTTTATCTCTTGTCTGATTTCTGCCCACCATGCATCTCGAGGACTCATTAGCAATTaGATTCCTGCTTGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALACDFISCLISAHHASRGLISN*IPAWFS Trigger: TGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCC...TCGAGATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGTCACATGCTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTCATTCCTTTGAGTTTGAGCTTGTTCATCAGTTGAGTGTGTACTTCATATTCCTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IHSFEFELVHQLSVYFIFLQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...GAATATGAAGTACACACTCAACTGATGAACAAGCTCAAACTCAAAGGAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAGGACTCATTAGCAATTaGATTCCTGCTTGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQGLISN*IPAWFS Trigger: TGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCC...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | GGTGCCCCCTCCCTCCTCCATGAGGACAGCCAGTCCTaGGGCATCCTCCGCTCCTGGGTGCGGACACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAPSLLHEDSQS*GILRSWVRTPL Trigger: CAGAGGTGTCCGCACCCAGGAGCGGAGGATGCCTCAGGACTGGCTGTCCTCATGGAGGAGGGAGGGGGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | TCCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTaGTCCTCAGTACCCCACCCCACGCCGGGCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQMCTQAIQPHP*SSVPHPTPGLW Trigger: CCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CTCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTaGGAAGAGGGTGACACACAATGGAGACACATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLSTPPHAGPLG*EEGDTQWRHMN Trigger: ATTCATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | GTGAGGAACGGGAACTCCCGCTGTTCCAACGCCGACTaGGTCTGTTGCCGTAAAAGGGCTTTAAAGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VRNGNSRCSNAD*VCCRKRALKGP Trigger: GGGGCCCTTTAAAGCCCTTTTACGGCAACAGACGCAGTCGGCGTTGGAACAGCGGGAGTTCCCGTTCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTaGCACACAATGGAGACACATGAATTTCACTCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTPRRASGLRRG*HTMETHEFHSV Trigger: AACCGAGTGAAATTCATGTGTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CTCCGCTCCTGGGTGCGGACACCTCTGAGAAGTTCCTaGGAGCACTCAGGCAATTCTACAGACCCACACCGT | + |
|
Preference number: 3 (lower is better) Translates to: LRSWVRTPLRSS*EHSGNSTDPHR Trigger: ACGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTCCGCACCCAGGAGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | GAAGGAACGCTGCTGGGCTGCTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTCGGACCACTAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EGTLLGCSVYPE*TPFLWLGPLTQ Trigger: CTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | ATGGGGAGCTGCATGCAGGAAGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGCACGCCGTTCCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: MGSCMQEGTLLG*SVYPECTPFLW Trigger: CCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | TTCTCTGGATGGGGAGCTGCATGCAGGAAGGAACGCTaGTGGGCTGCTCAGTTTATCCAGAGTGCACGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: FSGWGAACRKER*WAAQFIQSARR Trigger: ACGGCGTGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CATGATGTAGGACACAACAGCATTCCCGCCCAGCGCTaGCACGTGAGCTCGGACCATGGCAAACACTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HDVGHNSIPAQR*HVSSDHGKHFS Trigger: GCTGAAGTGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCCTACATCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | GGCTGCTCAGTTTATCCAGAGTGCACGCCGTTCCTATaGCTCGGACCACTAACCCAGACTCGCCCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GCSVYPECTPFL*LGPLTQTRPPD Trigger: ATCTGGAGGGCGAGTCTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCACTCTGGATAAACTGAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CCGGTACATGAGGGCTGGCAGTTGGCAGCAGGCTGCTaGGATGACATGACCTCTAAGTCGGAGTCACGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PVHEGWQLAAGC*DDMTSKSESRT Trigger: TGTTCGTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | ATCCTTTGTTCCAAACAGCCCTCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGCACAGCTGCCGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILCSKQPSTVPS*RNRGFSTAAVP Trigger: TGGCACGGCAGCTGTGCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTTTGGAACAAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | ATCTTAGAAGTCTGGAGCGCTGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCTCAGACACCTCCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILEVWSAVWVLG*GILSSPQTPPG Trigger: CCCCGGAGGTGTCTGAGGAGATGATAGGATCCCCCATCCCAGAACCCAGACAGCGCTCCAGACTTCTAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAATACTCGGGATCCTCATaGACCACAAGTTCTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GHNSIPAQRCHVSSDHGKYSGSS*TTSSST Trigger: TGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGTA...TTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACACATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TQQHSRPALPRELGPWQTHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...TGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | TGTGGATCCGATCTAAAAGCTTCACAGAGCGTGCACTaGCAACGCCACCGACGTGCACAAGAAGTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CGSDLKASQSVH*QRHRRAQEVQG Trigger: CCCCTGGACTTCTTGTGCACGTCGGTGGCGTTGTCAGTGCACGCTCTGTGAAGCTTTTAGATCGGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | GCTCGGACCATGGCAAACACTTCAGCAATGAAAGCGTaGAGAAAACCACTGACTCCGCCTTCCTCGCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARTMANTSAMKA*RKPLTPPSSRR Trigger: TCTCCGCGAGGAAGGCGGAGTCAGTGGTTTTCTCCACGCTTTCATTGCTGAAGTGTTTGCCATGGTCCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACAACAGCATTCCCGCCCAGCGCTGCCACGTGAGCTCGGACCATGGCAAACACAATTGGATTCCTGCTaGGTTTTCAAAGCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQQHSRPALPRELGPWQTQLDSC*VFKATG Trigger: TCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATTG...TGTTTGCCATGGTCCGAGCTCACGTGGCAGCGCTGGGCGGGAATGCTGTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | GGAGGCAGTGAGTCTGAGCAGAGCTCCAGTGGGAACTaGAGCAGTTCTTCGTTATCTGTGGAGGCTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGSESEQSSSGN*SSSSLSVEALC Trigger: ACAAAGAGCCTCCACAGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCTCTGCTCAGACTCACTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | ATCCTCATTGAAGGGAATCTCCTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAGGAACGCTGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ILIEGNLLQFSG*GAACRKERCWA Trigger: AGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGATTCCCTTCAATGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CATCAAGGAGATGAGTCTCTGCCTGGCTTCATTCGATaGCCTTGGGGTGCGGATCCGATCAATCCACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: HQGDESLPGFIR*PWGADPINPLI Trigger: TATCAGTGGATTGATCGGATCCGCACCCCAAGGGCATCGAATGAAGCCAGGCAGAGACTCATCTCCTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CTCTGTAATTCACCTGACATCAAGGAGATGAGTCTCTaGCTGGCTTCATTCGATGCCCTTGGGGTGCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LCNSPDIKEMSL*LASFDALGVRI Trigger: GATCCGCACCCCAAGGGCATCGAATGAAGCCAGGCAGAGACTCATCTCCTTGATGTCAGGTGAATTACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | ACCACTAACCCAGACTCGCCCTCCAGATCAAAGCACTaGAAGTACCCAACAACTGCATTCCCTCTCATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: TTNPDSPSRSKH*KYPTTAFPLIS Trigger: CGAGATGAGAGGGAATGCAGTTGTTGGGTACTTGCAGTGCTTTGATCTGGAGGGCGAGTCTGGGTTAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | AAGCGGCGTCATCTTAACAACCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCGATTCCGGAAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRRHLNNPNCGT*TRWSRAIPEIS Trigger: GGAAATTTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGGTTGTTAAGATGACGCCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CACCACCGCGTCCCCACTGACATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTTCTCCATGAAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: HHRVPTDIYETL*LVLTGVLHEDT Trigger: TGTGTCTTCATGGAGAACCCCAGTAAGAACCAGGCACAGTGTCTCATAAATGTCAGTGGGGACGCGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | TTTCCGACTGTGATCTTAGAAGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATCCTATCATCTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPTVILEVWSAV*VLGWGILSSPQ Trigger: CTGAGGAGATGATAGGATCCCCCATCCCAGAACCCAGACAGCGCTCCAGACTTCTAAGATCACAGTCGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | TTCGATGCCCTTGGGGTGCGGATCCGATCAATCCACTaGTACTCGGGATCCTCATTGACCACAAGTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FDALGVRIRSIH*YSGSSLTTSSS Trigger: AGAAGAACTTGTGGTCAATGAGGATCCCGAGTATCAGTGGATTGATCGGATCCGCACCCCAAGGGCATCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CTTCCTGCAGAAACCGAGGGTTCAGCACAGCTGCCGTaGCAGACGCTGATAAAATACAGACTTCTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPAETEGSAQLP*QTLIKYRLLHR Trigger: TCTGTGAAGAAGTCTGTATTTTATCAGCGTCTGGCACGGCAGCTGTGCTGAACCCTCGGTTTCTGCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | CTTCATCAGAACTTTCCGACTGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTGGGATGGGGGATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHQNFPTVILEV*SAVWVLGWGIL Trigger: TAGGATCCCCCATCCCAGAACCCAGACAGCGCTCCAGACTTCTAAGATCACAGTCGGAAAGTTCTGATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CCGACGCTAAGCCCATCAGCATGGTCTCGCCCACTGTaGTCTGAATTCTCAGTCCAAACAAAGCATTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PTLSPSAWSRPL*SEFSVQTKHSF Trigger: GAATGAATGCTTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGAGACCATGCTGATGGGCTTAGCGTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | TGCCAGACGCTGATAAAATACAGACTTCTTCACAGATaGTGGTTGACTCGCTGTAGCCCACTACAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: CQTLIKYRLLHR*WLTRCSPLQHG Trigger: GCCATGCTGTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | CAGACGCTGATAAAATACAGACTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCACTACAGCATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QTLIKYRLLHRC*LTRCSPLQHGS Trigger: GCTGCCATGCTGTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | GCTCCAGTGGGAACTGCAGCAGTTCTTCGTTATCTGTaGAGGCTCTTTGTAGTGACTTTTCAACGTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: APVGTAAVLRYL*RLFVVTFQRGV Trigger: AACCCCACGTTGAAAAGTCACTACAAAGAGCCTCCACAGATAACGAAGAACTGCTGCAGTTCCCACTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | GTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCATaGCACTTGCTTTTTCAACAGTCACAGCTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VEQSDSGNFHHP*HLLFQQSQLSV Trigger: CACAGAGAGCTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | CATCTTAACAACCCCAACTGTGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAAATTTCCATCACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLNNPNCGTCTR*SRAIPEISITH Trigger: ATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGGTTGTTAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CAATCTTTCTCTGTAATTCACCTGACATCAAGGAGATaGGTCTCTGCCTGGCTTCATTCGATGCCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QSFSVIHLTSRR*VSAWLHSMPLG Trigger: CCCCAAGGGCATCGAATGAAGCCAGGCAGAGACTCATCTCCTTGATGTCAGGTGAATTACAGAGAAAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | GCGGGAAACGGCATGTTCAGTTCATCATATGGTATATaGCAGAATCCGCAGCCCACCGGTAAATTCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGNGMFSSSYGI*QNPQPTGKFSS Trigger: TGAAGAGAATTTACCGGTGGGCTGCGGATTCTGCCATATACCATATGATGAACTGAACATGCCGTTTCCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGGTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCATGGCACTTGCTTTCCTACCCTAGACTCTaGATAAGCTTTCCATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HKVEQSDSGNFHHPWHLLSYPRL*ISFPFH Trigger: ATGAAATGGAAAGCTTATCAAGAGTCTAGGGTAGGA...AAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CCTTGCCTGAATAAGACAACCTTTACCAACAACCACTaGGTCTGTGGGCAGATCGATAGTTGTGAAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PCLNKTTFTNNH*VCGQIDSCEEN Trigger: GTTCTCTTCACAACTATCGATCTGCCCACAGACGCAGTGGTTGTTGGTAAAGGTTGTCTTATTCAGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGACAATTGGATTCCTGCTaGGTTTTCAAAGCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PANKHITHPANKVLTSSRQLDSC*VFKATG Trigger: TCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATTG...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | GGATCCGATCAATCCACTGATACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAAATCCGTGGATTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GSDQSTDTRDPH*PQVLLQIRGLP Trigger: TGGTAATCCACGGATTTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGTATCAGTGGATTGATCGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | ATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTaGTTTTCAAAGCCACAGGAGCTTCCTACCCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ISYGLISNWIPA*FSKPQELPTLD Trigger: GTCTAGGGTAGGAAGCTCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | CAGGGACTTTTTGCTTCCTGCAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCATGTTCAGTTCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: QGLFASCSYSNM*DERETACSVHH Trigger: ATGATGAACTGAACATGCCGTTTCCCGCTCATCTCACATATTGCTATAACTGCAGGAAGCAAAAAGTCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | CTGTGTCAGAAGAAGAGGACTGCCGACTGTAGGACTTaGAAGGTGAAAAGGAATAAGTTTGGTTTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCQKKRTADCRT*KVKRNKFGFSE Trigger: CTCTGAAAAACCAAACTTATTCCTTTTCACCTTCCAAGTCCTACAGTCGGCAGTCCTCTTCTTCTGACACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAACAATTGGATTCCTGCTaGGTTTTCAAAGCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQQLDSC*VFKATG Trigger: TCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATTG...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | AAACATGTTAATGATGCCGAGGTACTTGGTTATCTTTaGTCCAGGGATGAAAGAAAGCGGCGTCATCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KHVNDAEVLGYL*SRDERKRRHLN Trigger: GTTAAGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGATAACCAAGTACCTCGGCATCATTAACATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | AAGGTACCAGAATCCATGGGGCCTGTCTGTGTAGACTaGACAAACAAAATGTCAAGATCAGAAATTCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KVPESMGPVCVD*TNKMSRSEILN Trigger: GTTGAGAATTTCTGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | TTCTCACATAGGCCGTTGAAGTTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTACTTAGTCTGACCACT | + |
|
Preference number: 3 (lower is better) Translates to: FSHRPLKFLLRA*LVKLRLLSLTT Trigger: AGTGGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGGCCTATGTGAGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTTTCCCGAATGAAAAACATGTTAATGATGCCGAGGTACTTGGTTATCTTCTGCCCATTCCAGTCTaGGGTGTCAAACTCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: SGFPNEKHVNDAEVLGYLLPIPV*GVKLKS Trigger: AGATTTGAGTTTGACACCCAAGACTGGAATGGGCAG...AAGATAACCAAGTACCTCGGCATCATTAACATGTTTTTCATTCGGGAAACCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | CTCCATTTACAAATCAGCTATGGACTCATTAGCAATTaGATTCCTGCTTGGTTTTCAAAGCCACAGGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHLQISYGLISN*IPAWFSKPQEL Trigger: AAGCTCCTGTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCTCCTACCCTAGACTCTaGATAAGCTTTCCATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SIFKSPFHLLYQQCTSPISYPRL*ISFPFH Trigger: ATGAAATGGAAAGCTTATCAAGAGTCTAGGGTAGGA...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | TTATCAAAAGTTATTGCAACTGCTGTGACTGTGACCTaGATTAACTCATCTTCAGGCAGAGACACTGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSKVIATAVTVT*INSSSGRDTVK Trigger: CTTTACAGTGTCTCTGCCTGAAGATGAGTTAATCCAGGTCACAGTCACAGCAGTTGCAATAACTTTTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR TCA 72 bp | GCATTCATTCCTTTGAGTTTGAGCTTGTTCATCAGTTaGGTGTGTACTTCATATTCCATAAACGGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AFIPLSLSLFIS*VCTSYSINGKR Trigger: TCTCTTGCCGTTTATGGAATATGAAGTACACACTCAACTGATGAACAAGCTCAAACTCAAAGGAATGAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CCA 72 bp | TACAAATCCGTGGATTACCACAGCTCTGTAGCACTTTaGAATAGATGTTGTGCAAAAGAATTTAACTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: YKSVDYHSSVAL*NRCCAKEFNST Trigger: TGTGGAGTTAAATTCTTTTGCACAACATCTATTCCAAAGTGCTACAGAGCTGTGGTAATCCACGGATTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR GCA 72 bp | CAACAGTGTACCTCACCAATCCCTAAGATTATTGAGTaGAATATATCATTAGAAAACAATCCTGTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QQCTSPIPKIIE*NISLENNPVLP Trigger: AGGAAGAACAGGATTGTTTTCTAATGATATATTGCACTCAATAATCTTAGGGATTGGTGAGGTACACTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGGAAGGCCGTCAGGGTaGGGAACGGGAACTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGGRPSG*GTGTPA Trigger: AGCGGGAGTTCCCGTTCCTCACCCTGACGGCCTTCC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDVWSAV*VLGWGI Trigger: GATCCCCCATCCCAGAACCCAGACAGCGCTCCAGAC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACCCATGGCTTGGAGGATaGACCAGCGGAGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHPWLGG*TSGDSF Trigger: GAAGGAGTCTCCGCTGGTTCATCCTCCAAGCCATGG...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCGGAAGGCCGTCAGGGTaGGGAACGGGAACTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTGRPSG*GTGTPA Trigger: AGCGGGAGTTCCCGTTCCTCACCCTGACGGCCTTCC...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACAACTTCTCCGGTACATaGGGGCTGGCAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDNFSGT*GLAVGS Trigger: GCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHPNCGT*TRWSRA Trigger: CGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGG...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACTGCACGCCGTTCCTATaGCTCGGACCACTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHCTPFL*LGPLTQ Trigger: CTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCA...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGCGGCATCCATGGCTTaGAGGATGAACCAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHAASMA*RMNQRR Trigger: TCTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGVWSAV*VLGWGI Trigger: GATCCCCCATCCCAGAACCCAGACAGCGCTCCAGAC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACATGAGGGCTGGCAGTTaGCAGCAGGCTGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDMRAGS*QQAAEM Trigger: CATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCAT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGPNCGT*TRWSRA Trigger: CGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAATGAGGGCTGGCAGTTaGCAGCAGGCTGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGMRAGS*QQAAEM Trigger: CATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCAT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDRGQEL*SAEAHP Trigger: AGGATGAGCCTCTGCAGATCACAGTTCTTGACCACG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGGAACCAGCCTGAGATaGCTGTGGCAGCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGGTSLR*LWQLHC Trigger: ACAGTGAAGCTGCCACAGTCATCTCAGGCTGGTTCC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACTTCACAGATGCTGGTTaGCTCGCTGTAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHFTDAG*LAVAHY Trigger: GTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAA...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACTTCACAGATGCTGGTTaGCTCGCTGTAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDFTDAG*LAVAHY Trigger: GTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAA...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGCTGCTGAGATGACATaGCCTCTAAGTCGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHAAEMT*PLSRSH Trigger: GTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATCGATGCCCTTGGGGTaGGGATCCGATCAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGSMPLG*GSDQST Trigger: AGTGGATTGATCGGATCCGCACCCCAAGGGCATCGA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACTGCAGGAAGGAACGCTaGTGGGCTGCTCAGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDCRKER*WAAQFI Trigger: GATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCA...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCATCCGTCAGGTCACTaGCACGGTCCATCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTHPSGH*HGPSPA Trigger: TGCCGGTGATGGACCGTGCCAGTGACCTGACGGATG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACACTGTAAAGTTCACATaGCAGAGGCAGCAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHTVKFT*QRQQGV Trigger: GACCCCCTGCTGCCTCTGCCATGTGAACTTTACAGT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCACTCCGAGTTCCACTaGGGATTCAGTGACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDHSEFH*GFSDLR Trigger: TCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGRGQEL*SAEAHP Trigger: AGGATGAGCCTCTGCAGATCACAGTTCTTGACCACG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATTCACAGATGCTGGTTaGCTCGCTGTAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGFTDAG*LAVAHY Trigger: GTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHSVYPE*TPFLWL Trigger: GAGCCATAGGAACGGCGTGCACTCTGGATAAACTGA...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATGTTCCAACGCCGACTaGGTCTGTTGCCGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGCSNAD*VCCRKR Trigger: CCTTTTACGGCAACAGACGCAGTCGGCGTTGGAACA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTPNCGT*TRWSRA Trigger: CGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGLQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDLLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGVWVLG*GILSSP Trigger: AGGAGATGATAGGATCCCCCATCCCAGAACCCAGAC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDVILEV*SAVWVL Trigger: CAGAACCCAGACAGCGCTCCAGACTTCTAAGATCAC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCCATTCCAGTATAGATaGGAGTGGGAACAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDPFQYR*EWEQTQ Trigger: CTGTGTCTGTTCCCACTCTCATCTATACTGGAATGG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGGTTGGGATCCTCATTaGAGGGAATCTCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDGWDPH*RESPSV Trigger: AACTGAAGGAGATTCCCTTCAATGAGGATCCCAACC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGATTTCTGCCCACCATaGATCTCGAGTTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDDFCPP*ISSFWF Trigger: GAACCAGAAACTCGAGATGCATGGTGGGCAGAAATC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAGCTCCAGTGGGAACTaGAGCAGTTCTTCGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHSSSGN*SSSSLS Trigger: AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCCACTGAGGATTCAGTaGCTTGAGATACACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDPLRIQ*LEIHIC Trigger: ACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACCATTCCAGTATAGATaGGAGTGGGAACAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGPFQYR*EWEQTQ Trigger: CTGTGTCTGTTCCCACTCTCATCTATACTGGAATGG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACTCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACAGACACACTGCTTCATaGTGTAGGACACAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDRHTAS*CRTQQH Trigger: ATGCTGTTGTGTCCTACATCATGAAGCAGTGTGTCT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCTGTTCCAACGCCGACTaGGTCTGTTGCCGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTCSNAD*VCCRKR Trigger: CCTTTTACGGCAACAGACGCAGTCGGCGTTGGAACA...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAAGCTCCAGTGGGAACTaGAGCAGTTCTTCGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGSSSGN*SSSSLS Trigger: AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTLQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACTGCATCTCGAGTTTCTaGTTCATCAGGGTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDCISSF*FIRVVD Trigger: ATCCACAACCCTGATGAACCAGAAACTCGAGATGCA...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCACAGCTTTAGCTGCTaGGAAAGGATGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTHSFSC*ERMRRQ Trigger: CTGCCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATCAGCAATGAAAGCGTaGAGAAAACCACTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGSAMKA*RKPLTP Trigger: CGGAGTCAGTGGTTTTCTCCACGCTTTCATTGCTGA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGCCGACTGTAGGACTTaGAAGGTGAAAAGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDADCRT*KVKRNK Trigger: CTTATTCCTTTTCACCTTCCAAGTCCTACAGTCGGC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACCACTGAGGATTCAGTaGCTTGAGATACACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGPLRIQ*LEIHIC Trigger: ACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGTRDPH*PQVLLQ Trigger: TTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGSYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCTCTTTGCTCCAGGGATaGAAGAAAGCGGCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTSLLQG*KKAASS Trigger: AGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGA...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACTCAAGAACTGTGATCTaGAGAGGCTCATCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDSRTVI*RGSSCK Trigger: TTTACAGGATGAGCCTCTGCAGATCACAGTTCTTGA...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDIYETL*LVLTGV Trigger: AACCCCAGTAAGAACCAGGCACAGTGTCTCATAAAT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACGCGGATACCATGTATaGTGTCATAAATTGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGRGYHV*CHKLGT Trigger: GGTTCCCAATTTATGACACCATACATGGTATCCGCG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACTGTCTGAACCTGTTTaGATCATTGAAGAGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGLSEPV*IIEEVY Trigger: GTAGACCTCTTCAATGATTCAAACAGGTTCAGACAG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATCAAGAACTGTGATCTaGAGAGGCTCATCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGSRTVI*RGSSCK Trigger: TTTACAGGATGAGCCTCTGCAGATCACAGTTCTTGA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPPNCGT*TRWSRA Trigger: CGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGG...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGTTCAGTTCATCATATaGTATATGGCAGAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHVQFII*YMAESA Trigger: TGCGGATTCTGCCATATACCATATGATGAACTGAAC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCTCAGCAATGAAAGCGTaGAGAAAACCACTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTSAMKA*RKPLTP Trigger: CGGAGTCAGTGGTTTTCTCCACGCTTTCATTGCTGA...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTTRDPH*PQVLLQ Trigger: TTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGT...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGAACATCTGTATTTCTaGTGTCCAGTTATTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHEHLYF*CPVIYA Trigger: GGCATAAATAACTGGACATCAGAAATACAGATGTTC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCAAACACTTCAGCAATaGAAGCGTGGAGAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTQTLQQ*KRGENH Trigger: GTGGTTTTCTCCACGCTTTCATTGCTGAAGTGTTTG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCAGACACACTGCTTCATaGTGTAGGACACAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTRHTAS*CRTQQH Trigger: ATGCTGTTGTGTCCTACATCATGAAGCAGTGTGTCT...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGTTCAGTTCATCATATaGTATATGGCAGAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGVQFII*YMAESA Trigger: TGCGGATTCTGCCATATACCATATGATGAACTGAAC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACTTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDFLLRA*LVKLRL Trigger: TAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAA...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAAATTTCCATCACCCATaGCACTTGCTTTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGNFHHP*HLLFQQ Trigger: CTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCTGTCTGAACCTGTTTaGATCATTGAAGAGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTLSEPV*IIEEVY Trigger: GTAGACCTCTTCAATGATTCAAACAGGTTCAGACAG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCGACATAACCTTGCCTaGATAAGACAACCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTRHNLA*IRQPLP Trigger: TGGTAAAGGTTGTCTTATTCAGGCAAGGTTATGTCG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGAACATCTGTATTTCTaGTGTCCAGTTATTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGEHLYF*CPVIYA Trigger: GGCATAAATAACTGGACATCAGAAATACAGATGTTC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCTCAAGAACTGTGATCTaGAGAGGCTCATCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTSRTVI*RGSSCK Trigger: TTTACAGGATGAGCCTCTGCAGATCACAGTTCTTGA...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTIYETL*LVLTGV Trigger: AACCCCAGTAAGAACCAGGCACAGTGTCTCATAAAT...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGTCTTTGCTCCAGGGATaGAAGAAAGCGGCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPSLLQG*KKAASS Trigger: AGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGA...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPSVYPE*TPFLWL Trigger: GAGCCATAGGAACGGCGTGCACTCTGGATAAACTGA...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLGWGAA*RKERCW Trigger: CCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCC...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGATTTATCAAAAGTTATTaGAACTGCTGTGACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGFIKSY*NCCDCD Trigger: GTCACAGTCACAGCAGTTGCAATAACTTTTGATAAA...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGACATCCGTCAGGTCACTaGCACGGTCCATCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRHPSGH*HGPSPA Trigger: TGCCGGTGATGGACCGTGCCAGTGACCTGACGGATG...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACATCCGTCAGGTCACTaGCACGGTCCATCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSHPSGH*HGPSPA Trigger: TGCCGGTGATGGACCGTGCCAGTGACCTGACGGATG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCGTTCAGTTCATCATATaGTATATGGCAGAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTVQFII*YMAESA Trigger: TGCGGATTCTGCCATATACCATATGATGAACTGAAC...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRVWSAV*VLGWGI Trigger: GATCCCCCATCCCAGAACCCAGACAGCGCTCCAGAC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAACTTCTCCGGTACATaGGGGCTGGCAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRNFSGT*GLAVGS Trigger: GCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTT...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEGWGAA*RKERCW Trigger: CCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGCTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPLLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGCGGCATCCATGGCTTaGAGGATGAACCAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSAASMA*RMNQRR Trigger: TCTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEVWSAV*VLGWGI Trigger: GATCCCCCATCCCAGAACCCAGACAGCGCTCCAGAC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACACCGGTACATGAGGGCTaGCAGTTGGCAGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTPVHEG*QLAAGC Trigger: GCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGG...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAACCGGTACATGAGGGCTaGCAGTTGGCAGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQPVHEG*QLAAGC Trigger: GCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGG...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCCGGTACATGAGGGCTaGCAGTTGGCAGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACPVHEG*QLAAGC Trigger: GCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| 3UTR CAA 72 bp | ACATGGCAGAGGCAGCAGGGGGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGCAAGTTCTCACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWQRQQGVMDRS*KYRLLSKFSHR Trigger: CCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGACCCCCTGCTGCCTCTGCCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGGAACCAGCCTGAGATaGCTGTGGCAGCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSGTSLR*LWQLHC Trigger: ACAGTGAAGCTGCCACAGTCATCTCAGGCTGGTTCC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGAAGGCCGTCAGGGTaGGGAACGGGAACTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLGRPSG*GTGTPA Trigger: AGCGGGAGTTCCCGTTCCTCACCCTGACGGCCTTCC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPSYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR TCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGAGACACACTGCTTCATaGTGTAGGACACAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPRHTAS*CRTQQH Trigger: ATGCTGTTGTGTCCTACATCATGAAGCAGTGTGTCT...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACGWGAA*RKERCW Trigger: CCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSSTVPS*RNRGFS Trigger: GCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCATCCGTCAGGTCACTaGCACGGTCCATCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACHPSGH*HGPSPA Trigger: TGCCGGTGATGGACCGTGCCAGTGACCTGACGGATG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCGTCTGGAGCGCTGTCTaGGTTCTGGGATGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPIVWSAV*VLGWGI Trigger: GATCCCCCATCCCAGAACCCAGACAGCGCTCCAGAC...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCATGAGGGCTGGCAGTTaGCAGCAGGCTGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPMRAGS*QQAAEM Trigger: CATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCAT...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| 3UTR CAA 72 bp | CAGAGCGATTCCGGAAATTTCCATCACCCATGGCACTaGCTTTTTCAACAGTCACAGCTCTCTGTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSDSGNFHHPWH*LFQQSQLSVQL Trigger: CAGCTGCACAGAGAGCTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLRGQEL*SAEAHP Trigger: AGGATGAGCCTCTGCAGATCACAGTTCTTGACCACG...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSRGQEL*SAEAHP Trigger: AGGATGAGCCTCTGCAGATCACAGTTCTTGACCACG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCCATGGCTTGGAGGATaGACCAGCGGAGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLPWLGG*TSGDSF Trigger: GAAGGAGTCTCCGCTGGTTCATCCTCCAAGCCATGG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATTCACAGATGCTGGTTaGCTCGCTGTAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSFTDAG*LAVAHY Trigger: GTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTAACTTCTCCGGTACATaGGGGCTGGCAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACNFSGT*GLAVGS Trigger: GCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTT...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCTCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPSTVPS*RNRGFS Trigger: GCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGA...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGTCGTTTATTCTCTTCTaGATGTGGGAGATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTSEKFLRALRQFYRPTPSFILF*MWEMCC Trigger: ACAGCACATCTCCCACATGCAGAAGAGAATAAACGA...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCCCAACTGTGGGACTTaGACAAGGTGGAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLPNCGT*TRWSRA Trigger: CGCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATGCACGCCGTTCCTATaGCTCGGACCACTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTCTPFL*LGPLTQ Trigger: CTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTGCACGCCGTTCCTATaGCTCGGACCACTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLCTPFL*LGPLTQ Trigger: CTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTTGCACGCCGTTCCTATaGCTCGGACCACTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACCTPFL*LGPLTQ Trigger: CTGGGTTAGTGGTCCGAGCCATAGGAACGGCGTGCA...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGACTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRLQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRVWVLG*GILSSP Trigger: AGGAGATGATAGGATCCCCCATCCCAGAACCCAGAC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSVWVLG*GILSSP Trigger: AGGAGATGATAGGATCCCCCATCCCAGAACCCAGAC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACACAGCTTTAGCTGCTaGGAAAGGATGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSHSFSC*ERMRRQ Trigger: CTGCCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTCCGGTACATGAGGGCTaGCAGTTGGCAGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAPVHEG*QLAAGC Trigger: GCAGCCTGCTGCCAACTGCCAGCCCTCATGTACCGG...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| 3UTR CAA 72 bp | ACGCTGATAAAATACAGACTTCTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTACAGCATGGCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLIKYRLLHRCW*TRCSPLQHGSL Trigger: TAGGCTGCCATGCTGTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAGTCTGTATTTTATCAGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGGAACCAGCCTGAGATaGCTGTGGCAGCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACGTSLR*LWQLHC Trigger: ACAGTGAAGCTGCCACAGTCATCTCAGGCTGGTTCC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAATTCACAGATGCTGGTTaGCTCGCTGTAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEFTDAG*LAVAHY Trigger: GTAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAA...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTTCTTTGCTCCAGGGATaGAAGAAAGCGGCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLSLLQG*KKAASS Trigger: AGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGA...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACAACTTCTCCGGTACATaGGGGCTGGCAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHNFSGT*GLAVGS Trigger: GCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTT...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGAGGGTCCTGATGAGTaGGTATTGGGGTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTEGPDE*VLGLGS Trigger: GGATCCCAACCCCAATACTCACTCATCAGGACCCTC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCTCGATGCCCTTGGGGTaGGGATCCGATCAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPISMPLG*GSDQST Trigger: AGTGGATTGATCGGATCCGCACCCCAAGGGCATCGA...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGGGAACGCTGCTGGGCTaGTCAGTTTATCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLGTLLG*SVYPEC Trigger: GCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCC...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAGWGAA*RKERCW Trigger: CCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTSTVPS*RNRGFS Trigger: GCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACAGGTGTTCTTTAGCTaGTGGGAAAGGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSQVFFS*WERMRR Trigger: CCTCCTCATCCTTTCCCAGCAGCTAAAGAACACCTG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203187.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCATCCGTCAGGTCACTaGCACGGTCCATCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLHPSGH*HGPSPA Trigger: TGCCGGTGATGGACCGTGCCAGTGACCTGACGGATG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAELQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLVILEV*SAVWVL Trigger: CAGAACCCAGACAGCGCTCCAGACTTCTAAGATCAC...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSVILEV*SAVWVL Trigger: CAGAACCCAGACAGCGCTCCAGACTTCTAAGATCAC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCCACAGCTTTAGCTGCTaGGAAAGGATGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPHSFSC*ERMRRQ Trigger: CTGCCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTG...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACATGAGGGCTGGCAGTTaGCAGCAGGCTGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHMRAGS*QQAAEM Trigger: CATCTCAGCAGCCTGCTGCCAACTGCCAGCCCTCAT...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACRGQEL*SAEAHP Trigger: AGGATGAGCCTCTGCAGATCACAGTTCTTGACCACG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAATCTTTGCTCCAGGGATaGAAGAAAGCGGCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAESLLQG*KKAASS Trigger: AGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGA...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGCTGCTGAGATGACATaGCCTCTAAGTCGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACAAEMT*PLSRSH Trigger: GTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTAACTTCTCCGGTACATaGGGGCTGGCAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQANFSGT*GLAVGS Trigger: GCTGCCAACTGCCAGCCCTCATGTACCGGAGAAGTT...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTGGTTGGGATCCTCATTaGAGGGAATCTCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLGWDPH*RESPSV Trigger: AACTGAAGGAGATTCCCTTCAATGAGGATCCCAACC...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACTCGATGCCCTTGGGGTaGGGATCCGATCAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHSMPLG*GSDQST Trigger: AGTGGATTGATCGGATCCGCACCCCAAGGGCATCGA...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATGCAGGAAGGAACGCTaGTGGGCTGCTCAGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQCRKER*WAAQFI Trigger: GATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATGTTCCAACGCCGACTaGGTCTGTTGCCGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQCSNAD*VCCRKR Trigger: CCTTTTACGGCAACAGACGCAGTCGGCGTTGGAACA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSLLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAAGTCACAGCTTTAGCTaGTGGGAAAGGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAESHSFS*WERMRR Trigger: CCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTGACT...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLLQFSG*GAACRK Trigger: CTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATCATCATATGGTATATaGCAGAATCCGCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSSSYGI*QNPQPT Trigger: GGTGGGCTGCGGATTCTGCCATATACCATATGATGA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGTCTGGGTTCTGGGATaGGGGATCCTATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACVWVLG*GILSSP Trigger: AGGAGATGATAGGATCCCCCATCCCAGAACCCAGAC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAACTGTAAAGTTCACATaGCAGAGGCAGCAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQTVKFT*QRQQGV Trigger: GACCCCCTGCTGCCTCTGCCATGTGAACTTTACAGT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTACTGTAAAGTTCACATaGCAGAGGCAGCAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACTVKFT*QRQQGV Trigger: GACCCCCTGCTGCCTCTGCCATGTGAACTTTACAGT...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGGGACTTGCACAAGGTaGAGCAGAGCGATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHGTCTR*SRAIPE Trigger: TTCCGGAATCGCTCTGCTCCACCTTGTGCAAGTCCC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATCAGCAATGAAAGCGTaGAGAAAACCACTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSSAMKA*RKPLTP Trigger: CGGAGTCAGTGGTTTTCTCCACGCTTTCATTGCTGA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| 3UTR CAA 72 bp | CAGGGGGTCATGGACCGAAGTTTGAAATACAGGCTCTaGAGCAAGTTCTCACATAGGCCGTTGAAGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGVMDRSLKYRL*SKFSHRPLKFL Trigger: TAAGAACTTCAACGGCCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGACCCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 72 bp | CAATGGAGACACATGAATTTCACTCGGTTGAGCCAGTaGAGCCGCTGTCTTCAAGTTGTAACTTCTCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QWRHMNFTRLSQ*SRCLQVVTSPV Trigger: TACCGGAGAAGTTACAACTTGAAGACAGCGGCTCAACTGGCTCAACCGAGTGAAATTCATGTGTCTCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGGAACCAGCCTGAGATaGCTGTGGCAGCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAGTSLR*LWQLHC Trigger: ACAGTGAAGCTGCCACAGTCATCTCAGGCTGGTTCC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGTTCTGAGTGAGTCGTaGGCCAGTAGCAGTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTVLSES*ASSSVN Trigger: ATTCACACTGCTACTGGCTCACGACTCACTCAGAAC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGACACAGAGAAGTTCTaGGTGAGTCGTGAGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTDTEKF*VSREPV Trigger: TACTGGCTCACGACTCACTCAGAACTTCTCTGTGTC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLSYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRSYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTCTTTGCTCCAGGGATaGAAGAAAGCGGCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSLLQG*KKAASS Trigger: AGATGACGCCGCTTTCTTTCATCCCTGGAGCAAAGA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACAAACACTTCAGCAATaGAAGCGTGGAGAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSQTLQQ*KRGENH Trigger: GTGGTTTTCTCCACGCTTTCATTGCTGAAGTGTTTG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGCTGCTGAGATGACATaGCCTCTAAGTCGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHAAEMT*PLSRSH Trigger: GTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGAGGGTCCTGATGAGTaGGTATTGGGGTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAEGPDE*VLGLGS Trigger: GGATCCCAACCCCAATACTCACTCATCAGGACCCTC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGAGGGTCCTGATGAGTaGGTATTGGGGTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLEGPDE*VLGLGS Trigger: GGATCCCAACCCCAATACTCACTCATCAGGACCCTC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTTGCAGCTGGTATACCTaGGTTAGAGTTCGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACCSWYT*VRVRTL Trigger: GAGAGTGCGAACTCTAACTCAGGTATACCAGCTGCA...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203187.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTCGATGCCCTTGGGGTaGGGATCCGATCAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQASMPLG*GSDQST Trigger: AGTGGATTGATCGGATCCGCACCCCAAGGGCATCGA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSVYPE*TPFLWL Trigger: GAGCCATAGGAACGGCGTGCACTCTGGATAAACTGA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTSVYPE*TPFLWL Trigger: GAGCCATAGGAACGGCGTGCACTCTGGATAAACTGA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCGATTTCTGCCCACCATaGATCTCGAGTTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPDFCPP*ISSFWF Trigger: GAACCAGAAACTCGAGATGCATGGTGGGCAGAAATC...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGATTTCTGCCCACCATaGATCTCGAGTTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEDFCPP*ISSFWF Trigger: GAACCAGAAACTCGAGATGCATGGTGGGCAGAAATC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAELLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTCCACAGTGCCTTCCTaGAGAAACCGAGGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQASTVPS*RNRGFS Trigger: GCTGAACCCTCGGTTTCTGCAGGAAGGCACTGTGGA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTAACAGCCCTCCACAGTaGCTTCCTGCAGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLNSPPQ*LPAETE Trigger: CTCGGTTTCTGCAGGAAGGCACTGTGGAGGGCTGTT...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGAGTCACAGCTTTAGCTaGTGGGAAAGGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSHSFS*WERMRR Trigger: CCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTGACT...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCGCGGATACCATGTATaGTGTCATAAATTGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLRGYHV*CHKLGT Trigger: GGTTCCCAATTTATGACACCATACATGGTATCCGCG...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAAGTAGCAGTGTGAATTaGGCTGTTGTGAGTCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQSSSVN*AVVSRA Trigger: CGCTCGACTCACAACAGCCCAATTCACACTGCTACT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATGCATCTCGAGTTTCTaGTTCATCAGGGTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSCISSF*FIRVVD Trigger: ATCCACAACCCTGATGAACCAGAAACTCGAGATGCA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACACTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTLLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLLLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPILLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGGTGATCTTAGAAGTCTaGAGCGCTGTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLVILEV*SAVWVL Trigger: CAGAACCCAGACAGCGCTCCAGACTTCTAAGATCAC...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGCCGACTGTAGGACTTaGAAGGTGAAAAGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSADCRT*KVKRNK Trigger: CTTATTCCTTTTCACCTTCCAAGTCCTACAGTCGGC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAETRDPH*PQVLLQ Trigger: TTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGT...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGACACAGAGAAGTTCTaGGTGAGTCGTGAGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHDTEKF*VSREPV Trigger: TACTGGCTCACGACTCACTCAGAACTTCTCTGTGTC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAAGTTATAGCAATATGTaGGATGAGCGGGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAESYSNM*DERETA Trigger: TGCCGTTTCCCGCTCATCTCACATATTGCTATAACT...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCTCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGCTGCTGAGATGACATaGCCTCTAAGTCGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLAAEMT*PLSRSH Trigger: GTGACTCCGACTTAGAGGTCATGTCATCTCAGCAGC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGGTTGGGATCCTCATTaGAGGGAATCTCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTGWDPH*RESPSV Trigger: AACTGAAGGAGATTCCCTTCAATGAGGATCCCAACC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACTCAGTTTATCCAGAGTaGACGCCGTTCCTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHSVYPE*TPFLWL Trigger: GAGCCATAGGAACGGCGTGCACTCTGGATAAACTGA...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTGCAGGAAGGAACGCTaGTGGGCTGCTCAGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQACRKER*WAAQFI Trigger: GATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLLLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCATCGTTTATTCTCTTCTaGATGTGGGAGATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSSFILF*MWEMCC Trigger: ACAGCACATCTCCCACATGCAGAAGAGAATAAACGA...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGATCGTTTATTCTCTTCTaGATGTGGGAGATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRSFILF*MWEMCC Trigger: ACAGCACATCTCCCACATGCAGAAGAGAATAAACGA...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAAGCTCCAGTGGGAACTaGAGCAGTTCTTCGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTSSSGN*SSSSLS Trigger: AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCT...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGAGCTCCAGTGGGAACTaGAGCAGTTCTTCGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSSSGN*SSSSLS Trigger: AGATAACGAAGAACTGCTGCAGTTCCCACTGGAGCT...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACAGTCACAGCTTTAGCTaGTGGGAAAGGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHSHSFS*WERMRR Trigger: CCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTGACT...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSIYETL*LVLTGV Trigger: AACCCCAGTAAGAACCAGGCACAGTGTCTCATAAAT...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCTCATCATATGGTATATaGCAGAATCCGCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPISSYGI*QNPQPT Trigger: GGTGGGCTGCGGATTCTGCCATATACCATATGATGA...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCATCATATGGTATATaGCAGAATCCGCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQSSYGI*QNPQPT Trigger: GGTGGGCTGCGGATTCTGCCATATACCATATGATGA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTCATCATATGGTATATaGCAGAATCCGCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSSYGI*QNPQPT Trigger: GGTGGGCTGCGGATTCTGCCATATACCATATGATGA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGTGACTTTTCAACGTaGGGTTTTGTGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRSDFST*GFVVCK Trigger: CTTACAGACCACAAAACCCCACGTTGAAAAGTCACT...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTCACAGCTTTAGCTGCTaGGAAAGGATGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAHSFSC*ERMRRQ Trigger: CTGCCTCCTCATCCTTTCCCAGCAGCTAAAGCTGTG...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| 3UTR CAA 72 bp | CCGTTGAAGTTCTTATTGAGAGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACCACTCTTACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLKFLLRAWLVK*RLLSLTTLTDV Trigger: CACGTCAGTAAGAGTGGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 72 bp | TCCCGAATGAAAAACATGTTAATGATGCCGAGGTACTaGGTTATCTTTGCTCCAGGGATGAAAGAAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRMKNMLMMPRY*VIFAPGMKESG Trigger: GCCGCTTTCTTTCATCCCTGGAGCAAAGATAACCAAGTACCTCGGCATCATTAACATGTTTTTCATTCGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCCACTGAGGATTCAGTaGCTTGAGATACACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLPLRIQ*LEIHIC Trigger: ACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGAATTTAACTCCACATaGAGACTGTCTGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSEFNST*RLSEPV Trigger: AACAGGTTCAGACAGTCTTCATGTGGAGTTAAATTC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLTRDPH*PQVLLQ Trigger: TTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGT...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGTTCTGAGTGAGTCGTaGGCCAGTAGCAGTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLVLSES*ASSSVN Trigger: ATTCACACTGCTACTGGCTCACGACTCACTCAGAAC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTTCGCCCACTGTGATCTaGATTCTCAGTCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACSPTVI*ILSPNK Trigger: TTTGTTTGGACTGAGAATTCAGATCACAGTGGGCGA...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCAAACACTTCAGCAATaGAAGCGTGGAGAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACQTLQQ*KRGENH Trigger: GTGGTTTTCTCCACGCTTTCATTGCTGAAGTGTTTG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCGCGGATACCATGTATaGTGTCATAAATTGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPIRGYHV*CHKLGT Trigger: GGTTCCCAATTTATGACACCATACATGGTATCCGCG...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCGCGGATACCATGTATaGTGTCATAAATTGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACRGYHV*CHKLGT Trigger: GGTTCCCAATTTATGACACCATACATGGTATCCGCG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTGCATCTCGAGTTTCTaGTTCATCAGGGTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLCISSF*FIRVVD Trigger: ATCCACAACCCTGATGAACCAGAAACTCGAGATGCA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTTGCATCTCGAGTTTCTaGTTCATCAGGGTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACCISSF*FIRVVD Trigger: ATCCACAACCCTGATGAACCAGAAACTCGAGATGCA...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATGCATCTCGAGTTTCTaGTTCATCAGGGTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTCISSF*FIRVVD Trigger: ATCCACAACCCTGATGAACCAGAAACTCGAGATGCA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCTTCTTCACAGATGCTaGTTGACTCGCTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLLLHRC*LTRCSP Trigger: TGGGCTACAGCGAGTCAACCAGCATCTGTGAAGAAG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACTCAGCAATGAAAGCGTaGAGAAAACCACTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHSAMKA*RKPLTP Trigger: CGGAGTCAGTGGTTTTCTCCACGCTTTCATTGCTGA...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTGCCCATTCCAGTCTTaGGTGTCAAACTCAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLCPFQS*VSNSNL Trigger: CAGATTTGAGTTTGACACCCAAGACTGGAATGGGCA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTTGCCCATTCCAGTCTTaGGTGTCAAACTCAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACCPFQS*VSNSNL Trigger: CAGATTTGAGTTTGACACCCAAGACTGGAATGGGCA...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCTGTCTGAACCTGTTTaGATCATTGAAGAGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLLSEPV*IIEEVY Trigger: GTAGACCTCTTCAATGATTCAAACAGGTTCAGACAG...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTCTGAACCTGTTTaGATCATTGAAGAGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACLSEPV*IIEEVY Trigger: GTAGACCTCTTCAATGATTCAAACAGGTTCAGACAG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGAATTTAACTCCACATaGAGACTGTCTGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEEFNST*RLSEPV Trigger: AACAGGTTCAGACAGTCTTCATGTGGAGTTAAATTC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCGACATAACCTTGCCTaGATAAGACAACCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPIRHNLA*IRQPLP Trigger: TGGTAAAGGTTGTCTTATTCAGGCAAGGTTATGTCG...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACACGACATAACCTTGCCTaGATAAGACAACCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTRHNLA*IRQPLP Trigger: TGGTAAAGGTTGTCTTATTCAGGCAAGGTTATGTCG...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGAACATCTGTATTTCTaGTGTCCAGTTATTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSREHLYF*CPVIYA Trigger: GGCATAAATAACTGGACATCAGAAATACAGATGTTC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACAGACACACTGCTTCATaGTGTAGGACACAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHRHTAS*CRTQQH Trigger: ATGCTGTTGTGTCCTACATCATGAAGCAGTGTGTCT...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATCAAGAACTGTGATCTaGAGAGGCTCATCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTSRTVI*RGSSCK Trigger: TTTACAGGATGAGCCTCTGCAGATCACAGTTCTTGA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGCCAATAGCATCGTTTaGACTGTAAGTATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHANSIV*TVSIVV Trigger: GACCACGATACTTACAGTGCAAACGATGCTATTGGC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGATTTCTGCCCACCATaGATCTCGAGTTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQADFCPP*ISSFWF Trigger: GAACCAGAAACTCGAGATGCATGGTGGGCAGAAATC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCTCTTGTCTGATTTCTaGCCACCATGCATCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLLLSDF*PPCISS Trigger: ACTCGAGATGCATGGTGGGCAGAAATCAGACAAGAG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCGTTTATTCTCTTCTaGATGTGGGAGATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQSFILF*MWEMCC Trigger: ACAGCACATCTCCCACATGCAGAAGAGAATAAACGA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTCGTTTATTCTCTTCTaGATGTGGGAGATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSFILF*MWEMCC Trigger: ACAGCACATCTCCCACATGCAGAAGAGAATAAACGA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACIYETL*LVLTGV Trigger: AACCCCAGTAAGAACCAGGCACAGTGTCTCATAAAT...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCATTTATGAGACACTGTaGCTGGTTCTTACTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIFKSPFHLLYQQCTSPIIYETL*LVLTGV Trigger: AACCCCAGTAAGAACCAGGCACAGTGTCTCATAAAT...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTCATCATATGGTATATaGCAGAATCCGCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQASSYGI*QNPQPT Trigger: GGTGGGCTGCGGATTCTGCCATATACCATATGATGA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGTTCAGTTCATCATATaGTATATGGCAGAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEVQFII*YMAESA Trigger: TGCGGATTCTGCCATATACCATATGATGAACTGAAC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGAGTGACTTTTCAACGTaGGGTTTTGTGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLSDFST*GFVVCK Trigger: CTTACAGACCACAAAACCCCACGTTGAAAAGTCACT...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAAGTGACTTTTCAACGTaGGGTTTTGTGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQSDFST*GFVVCK Trigger: CTTACAGACCACAAAACCCCACGTTGAAAAGTCACT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| 3UTR CAA 72 bp | CAGATCGATAGTTGTGAAGAGAACATCAGGGACTTTTaGCTTCCTGCAGTTATAGCAATATGTGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIDSCEENIRDF*LPAVIAICEMS Trigger: GCTCATCTCACATATTGCTATAACTGCAGGAAGCAAAAAGTCCCTGATGTTCTCTTCACAACTATCGATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| 3UTR CAA 72 bp | AAATACAGGCTCTTGAGCAAGTTCTCACATAGGCCGTaGAAGTTCTTATTGAGAGCTTGGTTAGTCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYRLLSKFSHRP*KFLLRAWLVKL Trigger: CAACTTGACTAACCAAGCTCTCAATAAGAACTTCAACGGCCTATGTGAGAACTTGCTCAAGAGCCTGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCCACTGAGGATTCAGTaGCTTGAGATACACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLPLRIQ*LEIHIC Trigger: ACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR TCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGAATTTAACTCCACATaGAGACTGTCTGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACEFNST*RLSEPV Trigger: AACAGGTTCAGACAGTCTTCATGTGGAGTTAAATTC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGGAATTTAACTCCACATaGAGACTGTCTGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLEFNST*RLSEPV Trigger: AACAGGTTCAGACAGTCTTCATGTGGAGTTAAATTC...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTACTCGGGATCCTCATTaGCCACAAGTTCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLTRDPH*PQVLLQ Trigger: TTGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGT...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTAGACACACTGCTTCATaGTGTAGGACACAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLRHTAS*CRTQQH Trigger: ATGCTGTTGTGTCCTACATCATGAAGCAGTGTGTCT...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGATTTATCAAAAGTTATTaGAACTGCTGTGACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PANKHITHPANKVLTSSRFIKSY*NCCDCD Trigger: GTCACAGTCACAGCAGTTGCAATAACTTTTGATAAA...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGGTTCAGTTCATCATATaGTATATGGCAGAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLVQFII*YMAESA Trigger: TGCGGATTCTGCCATATACCATATGATGAACTGAAC...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCTTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPFLLRA*LVKLRL Trigger: TAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAA...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAGTGGTCTGTAAGGCCTaGTTTTTATCAAAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PESMGPVCVDWTNKMSRSVVCKA*FLSKVI Trigger: AATAACTTTTGATAAAAACCAGGCCTTACAGACCAC...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTGTGGTCTGTAAGGCCTaGTTTTTATCAAAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLVVCKA*FLSKVI Trigger: AATAACTTTTGATAAAAACCAGGCCTTACAGACCAC...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAAATTTCCATCACCCATaGCACTTGCTTTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQNFHHP*HLLFQQ Trigger: CTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAAATTTCCATCACCCATaGCACTTGCTTTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTNFHHP*HLLFQQ Trigger: CTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATT...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTAATTTCCATCACCCATaGCACTTGCTTTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HKLQITPITEGTRIHGACNFHHP*HLLFQQ Trigger: CTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATT...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGCCGACTGTAGGACTTaGAAGGTGAAAAGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLADCRT*KVKRNK Trigger: CTTATTCCTTTTCACCTTCCAAGTCCTACAGTCGGC...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTACTTTATCTCTTGTCTaGTTTCTGCCCACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLTLSLV*FLPTMH Trigger: ATGCATGGTGGGCAGAAATCAGACAAGAGATAAAGT...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCGACATAACCTTGCCTaGATAAGACAACCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLRHNLA*IRQPLP Trigger: TGGTAAAGGTTGTCTTATTCAGGCAAGGTTATGTCG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCTTTATCAAAAGTTATTaGAACTGCTGTGACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPFIKSY*NCCDCD Trigger: GTCACAGTCACAGCAGTTGCAATAACTTTTGATAAA...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTFLLRA*LVKLRL Trigger: TAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQFLLRA*LVKLRL Trigger: TAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAA...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTAGTGACTTTTCAACGTaGGGTTTTGTGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQASDFST*GFVVCK Trigger: CTTACAGACCACAAAACCCCACGTTGAAAAGTCACT...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGTTTATCAAAAGTTATTaGAACTGCTGTGACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLQITPITEGTRIHGACLFIKSY*NCCDCD Trigger: GTCACAGTCACAGCAGTTGCAATAACTTTTGATAAA...CAGACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAGTGGTCTGTAAGGCCTaGTTTTTATCAAAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKQKTLRKLQSFSENTVVCKA*FLSKVI Trigger: AATAACTTTTGATAAAAACCAGGCCTTACAGACCAC...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTAATTTCCATCACCCATaGCACTTGCTTTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQANFHHP*HLLFQQ Trigger: CTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATT...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR TCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGAACATCTGTATTTCTaGTGTCCAGTTATTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAEHLYF*CPVIYA Trigger: GGCATAAATAACTGGACATCAGAAATACAGATGTTC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTTCTTATTGAGAGCTTaGTTAGTCAAGTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAFLLRA*LVKLRL Trigger: TAGCCTCAACTTGACTAACCAAGCTCTCAATAAGAA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTTTATCAAAAGTTATTaGAACTGCTGTGACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAFIKSY*NCCDCD Trigger: GTCACAGTCACAGCAGTTGCAATAACTTTTGATAAA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACCCCCAACTGTGGGACTaGCACAAGGTGGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDPQLWD*HKVEQS Trigger: GCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGG...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCCCCCAACTGTGGGACTaGCACAAGGTGGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTPQLWD*HKVEQS Trigger: GCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGG...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGGTTTTTCAGAGGGGTaGAGGGTCCTGATGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDGFSEG*RVLMSE Trigger: CTCACTCATCAGGACCCTCAACCCCTCTGAAAAACC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGGGTTGGGATCCTCATaGAAGGGAATCTCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDGLGSS*KGISFS Trigger: ACTGAAGGAGATTCCCTTCAATGAGGATCCCAACCC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGGTTTTTCAGAGGGGTaGAGGGTCCTGATGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGGFSEG*RVLMSE Trigger: CTCACTCATCAGGACCCTCAACCCCTCTGAAAAACC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDAWLVK*RLLSLT Trigger: GGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHAWLVK*RLLSLT Trigger: GGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGC...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDVMDRS*KYRLLS Trigger: GCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGAC...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACATTCTCTTCAATCCTTaGTTCCAAACAGCCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHILFNP*FQTALH Trigger: GTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAAT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGVMDRS*KYRLLS Trigger: GCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGAC...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGACATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS GCA 90 bp | GAGGATGAACCAGCGGAGACTCCTTCAGTTCTCTGGATGGGGAGCTaGATGCAGGAAGGAACGCTGCTGGGCTGCTCAGTTTATCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EDEPAETPSVLWMGS*MQEGTLLGCSVYPE Trigger: CTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGGTTCATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACATGTCAATGTACACCTaGCCAATAGCATCGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVPHPTPGLWAEKRVTHMSMYT*PIASFA Trigger: TGCAAACGATGCTATTGGCAAGGTGTACATTGACAT...GTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTACTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GACACCTCTGAGAAGTTCCTGAGAGCACTCAGGCAATTCTACAGACCCACACCGAGCGGCATCCATGGCTaGGAGGATGAACCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DTSEKFLRALRQFYRPTPSGIHG*EDEPAE Trigger: CTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGCT...CGGTGTGGGTCTGTAGAATTGCCTGAGTGCTCTCAGGAACTTCTCAGAGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR CAA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAATTCTCTTCAATCCTTaGTTCCAAACAGCCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGILFNP*FQTALH Trigger: GTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAAT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS GCA 90 bp | ATGAACCAGCGGAGACTCCTTCAGTTCTCTGGATGGGGAGCTGCATaGAGGAAGGAACGCTGCTGGGCTGCTCAGTTTATCCAGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MNQRRLLQFSGWGAA*RKERCWAAQFIQSA Trigger: TGCACTCTGGATAAACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS CCA 90 bp | AGCAGTGTGAATTGGGCTGTTGTGAGTCGAGCGGCATCCATGGCTTaGAGGATGAACCAGCGGAGACTCCTTCAGTTCTCTGGATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVNWAVVSRAASMA*RMNQRRLLQFSGWG Trigger: TCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGCTCGACTCACAACAGCCCAATTCACACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACAAAGCATTCATTCCTTaGAGTTTGAGCTTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPGLWAEKRVTHNGDKAFIP*SLSLFI Trigger: GATGAACAAGCTCAAACTCAAAGGAATGAATGCTTT...GTCTCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAAAAGCATTCATTCCTTaGAGTTTGAGCTTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPGLWAEKRVTHNGKAFIP*SLSLFI Trigger: GATGAACAAGCTCAAACTCAAAGGAATGAATGCTTT...TCCATTGTGTGTCACCCTCTTCTCAGCCCAGAGGCCCGGCGTGGGGTGGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGTGCACACAAGCTATCCAGCCGCATCCCTGCTCCTCAGTACCCCACCGAGCTTGTTCATCAGTaGAGTGTGTACTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: PRCAHKLSSRIPAPQYPTELVHQ*SVYFIF Trigger: GAATATGAAGTACACACTCAACTGATGAACAAGCTC...GGTGGGGTACTGAGGAGCAGGGATGCGGCTGGATAGCTTGTGTGCACATCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCCCCAACTGTGGGACTaGCACAAGGTGGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLPQLWD*HKVEQS Trigger: GCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGG...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS CCA 90 bp | TTGTATTACCAAATTTTACCTCCACGAAGGCATCCGTCAGGTCACTaGCACGGTCCATCACCGGCAAATGGCGACCGGCCACAATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYYQILPPRRHPSGH*HGPSPANGDRPQFS Trigger: TGAAAATTGTGGCCGGTCGCCATTTGCCGGTGATGGACCGTGCCAGTGACCTGACGGATGCCTTCGTGGAGGTAAAATTTGGTAATACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAACCCCAACTGTGGGACTaGCACAAGGTGGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEPQLWD*HKVEQS Trigger: GCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGG...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS GCA 90 bp | AGGTGGAGCAGAGCGATTCCGGAAATTTCCATCACCCATGGCACTTaGTTTTTCAACAGTCACAGCTTTAGCTGCTGGGAAAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSRAIPEISITHGT*FFNSHSFSCWERMR Trigger: CCTCATCCTTTCCCAGCAGCTAAAGCTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCTGCTCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCAGCGGCATCCATGGCTaGGAGGATGAACCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIFKSPFHLLYQQCTSPISGIHG*EDEPAE Trigger: CTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGCT...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PESMGPVCVDWTNKMSRSLHRCW*TRCSPL Trigger: TAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCCCCAACTGTGGGACTaGCACAAGGTGGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLPQLWD*HKVEQS Trigger: GCTCTGCTCCACCTTGTGCAAGTCCCACAGTTGGGG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTGGGTTGGGATCCTCATaGAAGGGAATCTCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLGLGSS*KGISFS Trigger: ACTGAAGGAGATTCCCTTCAATGAGGATCCCAACCC...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: HKLQITPITEGTRIHGACLHRCW*TRCSPL Trigger: TAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SIFKSPFHLLYQQCTSPILHRCW*TRCSPL Trigger: TAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAG...GATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CAA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACACTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PHFKQKTLRKLQSFSENTLHRCW*TRCSPL Trigger: TAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAG...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PESMGPVCVDWTNKMSRSHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCACTGCCCATTCCAGTCTaGGGTGTCAAACTCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PESMGPVCVDWTNKMSRSLPIPV*GVKLKS Trigger: AGATTTGAGTTTGACACCCAAGACTGGAATGGGCAG...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAATTCTCTTCAATCCTTaGTTCCAAACAGCCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PESMGPVCVDWTNKMSRSILFNP*FQTALH Trigger: GTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAAT...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEAWLVK*RLLSLT Trigger: GGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAAGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLTNTSPIQLTKSSLQAEVMDRS*KYRLLS Trigger: GCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGAC...TTCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPVMDRS*KYRLLS Trigger: GCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGAC...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGGTTTTTCAGAGGGGTaGAGGGTCCTGATGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHGFSEG*RVLMSE Trigger: CTCACTCATCAGGACCCTCAACCCCTCTGAAAAACC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS TCA 90 bp | TTTTCAACAGTCACAGTTGTCTTAATTGATCCGCGCCTTATGGTCTaGGCTTTCAGTCTAATGAGCTCTATCCAGCTGCTGCATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVTVVLIDPRLMV*AFSLMSSIQLLHLS Trigger: AGACAGATGCAGCAGCTGGATAGAGCTCATTAGACTGAAAGCTCAGACCATAAGGCGCGGATCAATTAAGACAACTGTGACTGTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203673.3 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCCATGGGGCCTGTCTGTGTAGACTGGACAAACAAAATGTCAAGATCAATGTCAATGTACACCTaGCCAATAGCATCGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PESMGPVCVDWTNKMSRSMSMYT*PIASFA Trigger: TGCAAACGATGCTATTGGCAAGGTGTACATTGACAT...TGATCTTGACATTTTGTTTGTCCAGTCTACACAGACAGGCCCCATGGATTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAATCCCTACTCGGGATCCTCATaGACCACAAGTTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: HIQVSFPPSIPTVYLTNPYSGSS*TTSSST Trigger: TGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGTA...GGGATTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTCTTCACAGATGCTGGTaGACTCGCTGTAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLLHRCW*TRCSPL Trigger: TAGTGGGCTACAGCGAGTCAACCAGCATCTGTGAAG...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HKLQITPITEGTRIHGACAWLVK*RLLSLT Trigger: GGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGC...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTTTGAAATACAGGCTCTaGAGCAAGTTCTCACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLLKYRL*SKFSHR Trigger: CCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAA...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HKLQITPITEGTRIHGACHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CACAAATTACAAATAACTCCCATAACTGAAGGTACCAGAATCCATGGGGCCTGTCTGCCCATTCCAGTCTaGGGTGTCAAACTCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: HKLQITPITEGTRIHGACLPIPV*GVKLKS Trigger: AGATTTGAGTTTGACACCCAAGACTGGAATGGGCAG...ACAGGCCCCATGGATTCTGGTACCTTCAGTTATGGGAGTTATTTGTAATTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTCAAGCAGAGAGCTTGTTCATCAGTaGAGTGTGTACTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: PANKHITHPANKVLTSSRELVHQ*SVYFIF Trigger: GAATATGAAGTACACACTCAACTGATGAACAAGCTC...TCTGCTTGAAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS TCA 90 bp | GATTTCTCCGCGGATACCTCAAATTTAAACCACTCCGAGTTCCACTaGGGATTCAGTGACTTGAGATACACATCTGTCTTAAAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DFSADTSNLNHSEFH*GFSDLRYTSVLKVV Trigger: TACAACCTTTAAGACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTGGTTTAAATTTGAGGTATCCGCGGAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCATATTCAAGTCTCCTTTCCACCTTCTATACCAACAGTGTACCTCACCAAATGTCAATGTACACCTaGCCAATAGCATCGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAYSSLLSTFYTNSVPHQMSMYT*PIASFA Trigger: TGCAAACGATGCTATTGGCAAGGTGTACATTGACAT...TTGGTGAGGTACACTGTTGGTATAGAAGGTGGAAAGGAGACTTGAATATGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 |
||
| CDS-3UTR CAA 90 bp | CTACCCATCCAGCTAACAAACACATCACCCATCCAGCTAACAAAGTCCTCACTTAAAGCATTCATTCCTTaGAGTTTGAGCTTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPIQLTNTSPIQLTKSSLKAFIP*SLSLFI Trigger: GATGAACAAGCTCAAACTCAAAGGAATGAATGCTTT...AAGTGAGGACTTTGTTAGCTGGATGGGTGATGTGTTTGTTAGCTGGATGGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGCTTGGTTAGTCAAGTaGAGGCTACTTAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAAWLVK*RLLSLT Trigger: GGTCAGACTAAGTAGCCTCAACTTGACTAACCAAGC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACATTGAAATACAGGCTCTaGAGCAAGTTCTCACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHFKQKTLRKLQSFSENTLKYRL*SKFSHR Trigger: CCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAA...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGTCATGGACCGAAGTTaGAAATACAGGCTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAVMDRS*KYRLLS Trigger: GCTCAAGAGCCTGTATTTCAAACTTCGGTCCATGAC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTCATCACCCATGGCACTaGCTTTTTCAACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAHHPWH*LFQQSQ Trigger: CTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATG...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTTACTCGGGATCCTCATaGACCACAAGTTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLYSGSS*TTSSST Trigger: TGTAGAAGAACTTGTGGTCAATGAGGATCCCGAGTA...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCCATTTACAAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTATTCTCTTCAATCCTTaGTTCCAAACAGCCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSSIYKSAMDSLAIGFLLILFNP*FQTALH Trigger: GTGGAGGGCTGTTTGGAACAAAGGATTGAAGAGAAT...AAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTTGTAAATGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS TCA 90 bp | AAATCTTCATCGTCCACCTCAAATTTAAACCACTCCGAGTTCCACTaGGGATTCAGTGACTTGAGATACACATCTGTCTTAAAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSSSSTSNLNHSEFH*GFSDLRYTSVLKVV Trigger: TACAACCTTTAAGACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTGGTTTAAATTTGAGGTGGACGATGAAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAATCAGCTATGGACTCATTAGCAATTGGATTCCTGCTTGGTTTTCAAAGCCACGAGCTTGTTCATCAGTaGAGTGTGTACTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: KSAMDSLAIGFLLGFQSHELVHQ*SVYFIF Trigger: GAATATGAAGTACACACTCAACTGATGAACAAGCTC...GTGGCTTTGAAAACCAAGCAGGAATCCAATTGCTAATGAGTCCATAGCTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | CCTCACTTCAAGCAGAAGACACTGAGAAAGCTGCAGTCATTCTCTGAAAATACAAAAGCATTCATTCCTTaGAGTTTGAGCTTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PHFKQKTLRKLQSFSENTKAFIP*SLSLFI Trigger: GATGAACAAGCTCAAACTCAAAGGAATGAATGCTTT...TGTATTTTCAGAGAATGACTGCAGCTTTCTCAGTGTCTTCTGCTTGAAGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTTTGAAATACAGGCTCTaGAGCAAGTTCTCACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQNVKIRNSQLSQMCTQALKYRL*SKFSHR Trigger: CCTATGTGAGAACTTGCTCAAGAGCCTGTATTTCAA...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATGTCAAGATCAGAAATTCTCAACTCTCCCAGATGTGCACACAAGCTGAGCTTGTTCATCAGTaGAGTGTGTACTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: KQNVKIRNSQLSQMCTQAELVHQ*SVYFIF Trigger: GAATATGAAGTACACACTCAACTGATGAACAAGCTC...AGCTTGTGTGCACATCTGGGAGAGTTGAGAATTTCTGATCTTGACATTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000204655.3 |
||
| CDS TCA 72 bp | GTGAGGAACGGGAACTCCCGCCTTCTACAGAACCTATaGGGCGATCCTCCCCGCTGTTCCAACGCCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRNGNSRLLQNL*GDPPRCSNADC Trigger: GCAGTCGGCGTTGGAACAGCGGGGAGGATCGCCTCATAGGTTCTGTAGAAGGCGGGAGTTCCCGTTCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203673.3 ENSMUST00000204043.2 |
||
| CDS GCA 72 bp | CCAGCGGAGACTCCTTCAGTTCTCTGGATGGGGAGCTaGATGCAGGAAGGAACGCTGCTGGGCTGCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PAETPSVLWMGS*MQEGTLLGCSV Trigger: AACTGAGCAGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS CCA 72 bp | TCCGTCAGGTCACTGGCACGGTCCATCACCGGCAAATaGCGACCGGCCACAATTTTCACCTTCAGCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVRSLARSITGK*RPATIFTFSFP Trigger: GGGGAAGCTGAAGGTGAAAATTGTGGCCGGTCGCCATTTGCCGGTGATGGACCGTGCCAGTGACCTGACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS CCA 72 bp | CAAATTTTACCTCCACGAAGGCATCCGTCAGGTCACTaGCACGGTCCATCACCGGCAAATGGCGACCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QILPPRRHPSGH*HGPSPANGDRP Trigger: TGGCCGGTCGCCATTTGCCGGTGATGGACCGTGCCAGTGACCTGACGGATGCCTTCGTGGAGGTAAAATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 ENSMUST00000205119.3 |
||
| CDS CCA 72 bp | AGGATGAACCAGCGGAGACTCCTTCAGTTCTCTGGATaGGGAGCTGCATGCAGGAAGGAACGCTGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMNQRRLLQFSG*GAACRKERCWA Trigger: AGCCCAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGGTTCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS CCA 72 bp | TTGGAGGATGAACCAGCGGAGACTCCTTCAGTTCTCTaGATGGGGAGCTGCATGCAGGAAGGAACGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LEDEPAETPSVL*MGSCMQEGTLL Trigger: CAGCAGCGTTCCTTCCTGCATGCAGCTCCCCATCCAGAGAACTGAAGGAGTCTCCGCTGGTTCATCCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS CAA 72 bp | GAATTGGGCTGTTGTGAGTCGAGCGGCATCCATGGCTaGGAGGATGAACCAGCGGAGACTCCTTCAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELGCCESSGIHG*EDEPAETPSVL Trigger: GAGAACTGAAGGAGTCTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGCTCGACTCACAACAGCCCAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS CCA 72 bp | AATTGGGCTGTTGTGAGTCGAGCGGCATCCATGGCTTaGAGGATGAACCAGCGGAGACTCCTTCAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NWAVVSRAASMA*RMNQRRLLQFS Trigger: AGAGAACTGAAGGAGTCTCCGCTGGTTCATCCTCCAAGCCATGGATGCCGCTCGACTCACAACAGCCCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000203673.3 |
||
| CDS TCA 72 bp | GTCACAGTTGTCTTAATTGATCCGCGCCTTATGGTCTaGGCTTTCAGTCTAATGAGCTCTATCCAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTVVLIDPRLMV*AFSLMSSIQLL Trigger: CAGCAGCTGGATAGAGCTCATTAGACTGAAAGCTCAGACCATAAGGCGCGGATCAATTAAGACAACTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203673.3 |
||
| CDS GCA 72 bp | AGAGCGATTCCGGAAATTTCCATCACCCATGGCACTTaGTTTTTCAACAGTCACAGCTTTAGCTGCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAIPEISITHGT*FFNSHSFSCWE Trigger: TTCCCAGCAGCTAAAGCTGTGACTGTTGAAAAAGCAAGTGCCATGGGTGATGGAAATTTCCGGAATCGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000204655.3 |
||
| CDS TCA 72 bp | CATCGTTTGCACTGTAAGTATCGTGGTCAAGAACTGTaGTCTGCAGAGGCTCATCCTGTAAATCTTCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: HRLHCKYRGQEL*SAEAHPVNLHR Trigger: ACGATGAAGATTTACAGGATGAGCCTCTGCAGATCACAGTTCTTGACCACGATACTTACAGTGCAAACGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 |
||
| CDS GCA 72 bp | GTCGATGTCAATGTACACCTTGCCAATAGCATCGTTTaGACTGTAAGTATCGTGGTCAAGAACTGTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VDVNVHLANSIV*TVSIVVKNCDL Trigger: CAGATCACAGTTCTTGACCACGATACTTACAGTGCAAACGATGCTATTGGCAAGGTGTACATTGACATCGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 |
||
| CDS TCA 72 bp | TCGTCCACCTCAAATTTAAACCACTCCGAGTTCCACTaGGGATTCAGTGACTTGAGATACACATCTGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSTSNLNHSEFH*GFSDLRYTSVL Trigger: TAAGACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTGGTTTAAATTTGAGGTGGACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000087485.7 ENSMUST00000111758.9 ENSMUST00000171349.8 ENSMUST00000203187.3 ENSMUST00000203673.3 ENSMUST00000204140.2 ENSMUST00000204655.3 |
||
| CDS TCA 72 bp | GCGGATACCTCAAATTTAAACCACTCCGAGTTCCACTaGGGATTCAGTGACTTGAGATACACATCTGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ADTSNLNHSEFH*GFSDLRYTSVL Trigger: TAAGACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTGGTTTAAATTTGAGGTATCCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205119.3 |
||
| CDS TCA 72 bp | GGCACTTGCTTTTTCAACAGTCACAGTTGTCTTAATTaGTCCGCGCCTTATGGTCTGAGCTTTCAGTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTCFFNSHSCLN*SAPYGLSFQSN Trigger: ATTAGACTGAAAGCTCAGACCATAAGGCGCGGATCAATTAAGACAACTGTGACTGTTGAAAAAGCAAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203673.3 |
||