Pregenerated sensors for C2CD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045975Ensembl transcript IDs: ENSMUST00000170757.3, ENSMUST00000231575.2, ENSMUST00000231903.2, ENSMUST00000232165.2
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATAGACAAGCAGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTaGAGACCTTTCTGTTCCCCATCCTCCAGCTGTGAGGACAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: DRQAGIWWYWFLLFW*RPFCSPSSSCEDRG Trigger: CCCCCTGTCCTCACAGCTGGAGGATGGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTGTCTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | AAGCTCTGCCAGTGCAAAAGAGCCAGCCTTTTCCTAGCTGACTTCTaGAAGAGAGGTAGAACCCTCAGCTCCTCCAGTGCCATGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KLCQCKRASLFLADF*KRGRTLSSSSAMPA Trigger: GGCAGGCATGGCACTGGAGGAGCTGAGGGTTCTACCTCTCTTTCAGAAGTCAGCTAGGAAAAGGCTGGCTCTTTTGCACTGGCAGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | CAAGATAGACAAGCAGGCATCTGGTGGTACTGGTTCCTGCTGTTCTaGTGGAGACCTTTCTGTTCCCCATCCTCCAGCTGTGAGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: QDRQAGIWWYWFLLF*WRPFCSPSSSCEDR Trigger: CCTGTCCTCACAGCTGGAGGATGGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTGTCTATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | GGCACTATTTGGAGGTGTGGCCTGGTTGGAGAAAGTACATCACTGTaGGTGTGGGTTTTGAAGCTCTGCCAGTGCAAAAGAGCCAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: GTIWRCGLVGESTSL*VWVLKLCQCKRASL Trigger: AAGGCTGGCTCTTTTGCACTGGCAGAGCTTCAAAACCCACACCCACAGTGATGTACTTTCTCCAACCAGGCCACACCTCCAAATAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | TGCACTGCTGGTTTGAACAGTGTCTCTGTCCCTGTGCAGGTGCTTTaGTCCTCAAGTCTTTTTACCTGTTGGGATAGTGGAGACAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: CTAGLNSVSVPVQVL*SSSLFTCWDSGDSA Trigger: GGCACTGTCTCCACTATCCCAACAGGTAAAAAGACTTGAGGACCAAAGCACCTGCACAGGGACAGAGACACTGTTCAAACCAGCAGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR GCA 90 bp | TGTGCCACCCATGTCTTTCATAACAAATACAATCATTTCCACAGATaGCAGTCCCCACACACCAGCTTCAGGTTCGCCACACACCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: CATHVFHNKYNHFHR*QSPHTSFRFATHLG Trigger: TCCCAGGTGTGTGGCGAACCTGAAGCTGGTGTGTGGGGACTGGCATCTGTGGAAATGATTGTATTTGTTATGAAAGACATGGGTGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | AAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGTAACTTaGGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KVLRAQWLRPVFTVT*ETKAGESEFQDMSG Trigger: CCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTCAAGTTACAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | TCACTGCATGAAGGACAGGGGAAATGTGGCCAACTCCAGCCAACCTaGGTTCTGCTTCCAGATTCACAGACACATGGATTAGTGTTCATG | + |
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Preference number: 1 (lower is better) Translates to: SLHEGQGKCGQLQPT*VLLPDSQTHGLVFM Trigger: CATGAACACTAATCCATGTGTCTGTGAATCTGGAAGCAGAACTCAGGTTGGCTGGAGTTGGCCACATTTCCCCTGTCCTTCATGCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | GCACCATCAGAATCAGAATTCCTGGCACCTGTAGTCTCTGGGAATTaGCAGGTACGGATCACAATTCTGCAGACTGCATGGAGTAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: APSESEFLAPVVSGN*QVRITILQTAWSSN Trigger: ATTGCTACTCCATGCAGTCTGCAGAATTGTGATCCGTACCTGTCAATTCCCAGAGACTACAGGTGCCAGGAATTCTGATTCTGATGGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR GCA 90 bp | TTTTCTCAGGCTTGTCCTCTTTGTGTCCCCCATCTCTGTACACTCTaGTGTGATGGTATTCACAACTGGCAAAGGCTACTCAATGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: FSQACPLCVPHLCTL*CDGIHNWQRLLNGD Trigger: GTCTCCATTGAGTAGCCTTTGCCAGTTGTGAATACCATCACAGCAGAGTGTACAGAGATGGGGGACACAAAGAGGACAAGCCTGAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | CTAGGATCTCTCCTGCCTACCATCCATAGTCCATCAGATCACACATaGCTTCAAAGATGCAAGTCTCTCTCTTTATGTTCCCCCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LGSLLPTIHSPSDHT*LQRCKSLSLCSPSE Trigger: CTCTGAGGGGGAACATAAAGAGAGAGACTTGCATCTTTGAAGCCATGTGTGATCTGATGGACTATGGATGGTAGGCAGGAGAGATCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR GCA 90 bp | GGCTATCGTAGACATTTTTGGTCAACAGTGACTTTGCCCCTGAAATaGATATTTCTAATGTACAGAAGATGCCAGAGGGAGCTTCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: GYRRHFWSTVTLPLK*IFLMYRRCQRELPD Trigger: ATCAGGAAGCTCCCTCTGGCATCTTCTGTACATTAGAAATATGCATTTCAGGGGCAAAGTCACTGTTGACCAAAAATGTCTACGATAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | TCACATCTTCATTCCACCCTCAGCCAAGTGATCCAGGCAGCTTGGTaGTCCCACAACTTATTTATACACAGAACATGGACATTTTATGTA | + |
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Preference number: 1 (lower is better) Translates to: SHLHSTLSQVIQAAW*SHNLFIHRTWTFYV Trigger: TACATAAAATGTCCATGTTCTGTGTATAAATAAGTTGTGGGATCACCAAGCTGCCTGGATCACTTGGCTGAGGGTGGAATGAAGATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR GCA 90 bp | ATGACAATAATTATGATGATGATGATGATTGTGGAGGTTTGTATATaGTTGAACCAGGGAGTGGCACTATTTGGAGGTGTGGCCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: MTIIMMMMMIVEVCI*LNQGVALFGGVAWL Trigger: CAACCAGGCCACACCTCCAAATAGTGCCACTCCCTGGTTCAAGCATATACAAACCTCCACAATCATCATCATCATCATAATTATTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | CAAGTTTGGCCCATTGTTATTAGAACTTCTACACCTAAGACTAACTaGCACCTGAGATACAGAGTAATTTCCTCAGTTGCCCTAAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: QVWPIVIRTSTPKTN*HLRYRVISSVALKV Trigger: AACTTTTAGGGCAACTGAGGAAATTACTCTGTATCTCAGGTGCCAGTTAGTCTTAGGTGTAGAAGTTCTAATAACAATGGGCCAAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR TCA 90 bp | AATACCCTAAAATGTGACCAGAAGTCTCTGTTCACAGTAAAATTCTaGAGATCCCATAAGAAGAATTCCTGCAAGTTTGGCCCATTGTTA | + |
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Preference number: 1 (lower is better) Translates to: NTLKCDQKSLFTVKF*RSHKKNSCKFGPLL Trigger: TAACAATGGGCCAAACTTGCAGGAATTCTTCTTATGGGATCTTCAGAATTTTACTGTGAACAGAGACTTCTGGTCACATTTTAGGGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CCA 90 bp | ATTTCTGTAAATGTGGTCAGGGAAAATCCAAGCAAAAATCTAATTTaGAACTGGTTAGCAATAAATGGCCAAGTATCCACAGCTAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ISVNVVRENPSKNLI*NWLAINGQVSTARK Trigger: CTTCCTAGCTGTGGATACTTGGCCATTTATTGCTAACCAGTTCCAAATTAGATTTTTGCTTGGATTTTCCCTGACCACATTTACAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGCCATGCCTGCCTGGATGCTGCCATGCCCCGCCTTGATGATAATGGACCCAGAGGGAGCTTCCTaGTTGCATGTCAGTGACGAG | + |
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Preference number: 2 (lower is better) Translates to: SSAMPAWMLPCPALMIMDPEGAS*LHVSDE Trigger: CTCGTCACTGACATGCAATCAGGAAGCTCCCTCTGG...GTCCATTATCATCAAGGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGCCATGCCTGCCTGGATGCTGCCATGCCCCGCCTTGATGATAATGGACTTTATGTGGGGACACTaGAGCCAGGTGCCAACTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSAMPAWMLPCPALMIMDFMWGH*SQVPTL Trigger: TAAAGTTGGCACCTGGCTTCAGTGTCCCCACATAAA...GTCCATTATCATCAAGGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGGTGGTACTGGTTCCTaGTGTTCTGGTGGAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: VPACLRTHTCFCAWLSVSGGTGS*CSGGDL Trigger: AAGGTCTCCACCAGAACAGCAGGAACCAGTACCACC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGCTCCAGTGCCATGCCTaGCTGGATGCTGCCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: VYLKVKFSGPSGSGLYSLLQCHA*LDAAMP Trigger: GGGCATGGCAGCATCCAGGCAGGCATGGCACTGGAG...CAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCATCCCCCTCAGAGCTTTaGTGGCTTGGTGAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: WPPVCWMTATVSHTENAPSPSEL*WLGEAG Trigger: TCCAGCTTCACCAAGCCATCAAAGCTCTGAGGGGGA...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTAAGCCAGGAGCAGGATaGTCACAGAGTCATTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: VPACLRTHTCFCAWLSVSKPGAG*SQSHLW Trigger: CCACAAATGACTCTGTGAGCATCCTGCTCCTGGCTT...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGCCTGAAACACTTCTGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCGACACCTCTCCCTCCTaGCAAGGTCCAGACACAAAC | + |
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Preference number: 2 (lower is better) Translates to: KKPETLLAPSMLDDSYCVDTSPS*QGPDTN Trigger: GTTTGTGTCTGGACCTTGTCAGGAGGGAGAGGTGTC...GACACAGTAGCTGTCATCCAACATACTGGGGGCCAGAAGTGTTTCAGGCTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CAA 90 bp | GATGCAAGTCTCTCTCTTTATGTTCCCCCTCAGAGCTTTGATGGCTaGGTGAAGCTGGAGCCAGACACGGAGTATCTGGTAGCAAACTGG | + |
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Preference number: 2 (lower is better) Translates to: DASLSLYVPPQSFDG*VKLEPDTEYLVANW Trigger: CCAGTTTGCTACCAGATACTCCGTGTCTGGCTCCAGCTTCACCAAGCCATCAAAGCTCTGAGGGGGAACATAAAGAGAGAGACTTGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CAA 90 bp | TCCTCAAGTCTTTTTACCTGTTGGGATAGTGGAGACAGTGCCTGCTaGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSSLFTCWDSGDSAC*SQDPHLFLCLVVSQ Trigger: CTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCACTGTCTCCACTATCCCAACAGGTAAAAAGACTTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAGATATGTCTGGGTTACAGAATGAATTACAGGGCAGCCCAAGCAACAACCCCATCCTCCAGCTGTaGGGACAGGGGGTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: FQDMSGLQNELQGSPSNNPILQL*GQGVTW Trigger: CCAAGTCACCCCCTGTCCTCACAGCTGGAGGATGGG...GTTGTTGCTTGGGCTGCCCTGTAATTCATTCTGTAACCCAGACATATCTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGGAAGCAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATGCTCACACAGCCTCAGCATATTTaGGCTCAGCATACTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LKEAGLRCGWEARSRMLTQPQHI*AQHTVC Trigger: GCAGACAGTATGCTGAGCTCAAATATGCTGAGGCTG...TGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGGAAGCAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATGCTCACATGGGTTTTGAAGCTCTaGCAGTGCAAAAGAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKEAGLRCGWEARSRMLTWVLKL*QCKRAS Trigger: GCTGGCTCTTTTGCACTGGCAGAGCTTCAAAACCCA...TGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGCTCTATTCAGTCACTaGATGAAGGACAGGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VPACLRTHTCFCAWLSVSALFSH*MKDRGN Trigger: ATTTCCCCTGTCCTTCATGCAGTGACTGAATAGAGC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGAAGCAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATGCTCACACCAACGCAATGTCTCTaGAGGGTTCTGAGACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LKEAGLRCGWEARSRMLTPTQCL*RVLRLS Trigger: ACTGAGTCTCAGAACCCTCCAGAGACATTGCGTTGG...TGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGAGTTGTCTTGGTCATaGTGTCTGTTCACAGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: VPACLRTHTCFCAWLSVSELSWS*CLFTAV Trigger: TACTGCTGTGAACAGACACCATGACCAAGACAACTC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGGTCTCTGGAGGGTTCTaGGACTCAGTGAACCCACAA | + |
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Preference number: 2 (lower is better) Translates to: VYLKVKFSGPSGSGLYSLVSGGF*DSVNPQ Trigger: TTGTGGGTTCACTGAGTCTCAGAACCCTCCAGAGAC...CAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | ATGACCAAACGTGAAAAGAGGGCCAGGGAAATAGTCAGTTCAGTGGACAAGGACCAAGCAGGCATCTGGTaGTACTGGTTCCTGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: MTKREKRAREIVSSVDKDQAGIW*YWFLLF Trigger: GAACAGCAGGAACCAGTACCACCAGATGCCTGCTTG...GTCCTTGTCCACTGAACTGACTATTTCCCTGGCCCTCTTTTCACGTTTGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTAGTGCCATGCCTGCCTaGATGCTGCCATGCCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: GCSQSHLWARMAKNHLFFSAMPA*MLPCPA Trigger: GGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACT...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTCCCCAGTATGTTGGATaGCAGCTACTGTGTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: NMDILCKEPEVIGACTAGPQYVG*QLLCPT Trigger: TGTGGGACACAGTAGCTGTCATCCAACATACTGGGG...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGCCTGAAACACTTCTGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCTCAGTGAACCCACAATaGCAGGCATACAGATTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KKPETLLAPSMLDDSYCVSVNPQ*QAYRLG Trigger: TCCTAATCTGTATGCCTGGCATTGTGGGTTCACTGA...GACACAGTAGCTGTCATCCAACATACTGGGGGCCAGAAGTGTTTCAGGCTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGAATTCCTGCAAGTTTaGCCCATTGTTATTAGAACT | + |
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Preference number: 2 (lower is better) Translates to: VPACLRTHTCFCAWLSVSEFLQV*PIVIRT Trigger: AGTTCTAATAACAATGGGCCAAACTTGCAGGAATTC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTCAACTCCAGCCAACCTaGGTTCTGCTTCCAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: NMDILCKEPEVIGACTAGQLQPT*VLLPDS Trigger: TGAATCTGGAAGCAGAACTCAGGTTGGCTGGAGTTG...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCAAAATCTGGAAGTTCCTaGCACAATCTGCATAGAACA | + |
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Preference number: 2 (lower is better) Translates to: WPPVCWMTATVSHTENAPKSGSS*HNLHRT Trigger: TGTTCTATGCAGATTGTGCCAGGAACTTCCAGATTT...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCAACATGGCTTCAAAGATaGAAGTCTCTCTCTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: WPPVCWMTATVSHTENAPTWLQR*KSLSLC Trigger: ACATAAAGAGAGAGACTTGCATCTTTGAAGCCATGT...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCTACGGATCACAATTCTaGAGACTGCATGGAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVYGSQF*RLHGVA Trigger: TGCTACTCCATGCAGTCTGCAGAATTGTGATCCGTA...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAAATCTGGAAGTTCCTGGCACAATCTGCATAGAACACACTTAGTATTTGCAGGCATCTGGTGGTACTaGTTCCTGCTGTTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SKSGSSWHNLHRTHLVFAGIWWY*FLLFWW Trigger: CCACCAGAACAGCAGGAACCAGTACCACCAGATGCC...TGCAAATACTAAGTGTGTTCTATGCAGATTGTGCCAGGAACTTCCAGATTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGCTGATTGCATGTCAGTaGCGAGCACACAGGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ERQRQENQSFKICLGYRMLIACQ*RAHRFY Trigger: GTAAAACCTGTGTGCTCGTCACTGACATGCAATCAG...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR TCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTTACTGTGTCCCACACTaGAAATGCACCATCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: NMDILCKEPEVIGACTAGYCVPH*KCTIRI Trigger: GATTCTGATGGTGCATTTTCAGTGTGGGACACAGTA...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCGACACTGAAGCCAGGTaGCAACTTTATAATTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVDTEAR*QLYNFP Trigger: GGGAAAATTATAAAGTTGGCACCTGGCTTCAGTGTC...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTAGAGGAAGAAGGAGGTaGACTAGGATCTCTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GCSQSHLWARMAKNHLFFRGRRR*TRISPA Trigger: GGCAGGAGAGATCCTAGTCCACCTCCTTCTTCCTCT...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR TCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTGTCTGGGTTACAGAATaGATTACAGGGCAGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GCSQSHLWARMAKNHLFFVWVTE*ITGQPK Trigger: CTTGGGCTGCCCTGTAATTCATTCTGTAACCCAGAC...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGCTAATGTACAGAAGATaGCAGAGGGAGCTTCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: ERQRQENQSFKICLGYRMLMYRR*QRELPD Trigger: ATCAGGAAGCTCCCTCTGGCATCTTCTGTACATTAG...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCACCCAAAACACTGTATaGATCACAGTGTTCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVTQNTV*ITVFKE Trigger: CTCTTTGAACACTGTGATGCATACAGTGTTTTGGGT...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTTATCTGGTAGCAAACTaGACTGTGTTATCAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NMDILCKEPEVIGACTAGYLVAN*TVLSVL Trigger: GAGGACTGATAACACAGTCCAGTTTGCTACCAGATA...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAAGATATGTCTGGGTTACAGAATGAATTACAGGGCAGCCCAAGCAACAACGAAAGTACATCACTGTaGGTGTGGGTTTTGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FQDMSGLQNELQGSPSNNESTSL*VWVLKL Trigger: GAGCTTCAAAACCCACACCCACAGTGATGTACTTTC...GTTGTTGCTTGGGCTGCCCTGTAATTCATTCTGTAACCCAGACATATCTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTGGCACCTGTAGTCTCTaGGAATTGACAGGTACGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GCSQSHLWARMAKNHLFFGTCSL*ELTGTD Trigger: ATCCGTACCTGTCAATTCCCAGAGACTACAGGTGCC...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTAATGGACTGAACCTCTaGACTTGTAAGCCAGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LRQKLKPPKNVVKINGQSNGLNL*TCKPAS Trigger: TGAGGCTGGCTTACAAGTTCAGAGGTTCAGTCCATT...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGTGTCAGCCTTTCCACTaGTATAGTAGGAAAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ERQRQENQSFKICLGYRMCQPFH*YSRKMD Trigger: GTCCATTTTCCTACTATAGCAGTGGAAAGGCTGACA...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 90 bp | ATAATCACATCTTCATTCCACCCTCAGCCAAGTGATCCAGGCAGCTaGGTGATCCCACAACTTATTTATACACAGAACATGGACATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IITSSFHPQPSDPGS*VIPQLIYTQNMDIL Trigger: TAAAATGTCCATGTTCTGTGTATAAATAAGTTGTGGGATCACCAAGCTGCCTGGATCACTTGGCTGAGGGTGGAATGAAGATGTGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGTATCGTAGACATTTTTaGTCAACAGTGACTTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ERQRQENQSFKICLGYRMYRRHF*STVTLP Trigger: GGGCAAAGTCACTGTTGACCAAAAATGTCTACGATA...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 90 bp | TCCTATAATGTTGGCTATCGTAGACATTTTTGGTCAACAGTGACTTaGCCCCTGAAATGCATATTTCTAATGTACAGAAGATGCCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SYNVGYRRHFWSTVT*PLKCIFLMYRRCQR Trigger: CCTCTGGCATCTTCTGTACATTAGAAATATGCATTTCAGGGGCAAAGTCACTGTTGACCAAAAATGTCTACGATAGCCAACATTATAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAAGATATGTCTGGGTTACAGAATGAATTACAGGGCAGCCCAAGCAACAACTTCTACACCTCCACTTaGAAGAAGACTAGAGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FQDMSGLQNELQGSPSNNFYTST*KKTRVN Trigger: ATTTACTCTAGTCTTCTTGCAAGTGGAGGTGTAGAA...GTTGTTGCTTGGGCTGCCCTGTAATTCATTCTGTAACCCAGACATATCTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTACTTTGCCCCTGAAATaGATATTTCTAATGTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: NMDILCKEPEVIGACTAGTLPLK*IFLMYR Trigger: TCTGTACATTAGAAATATGCATTTCAGGGGCAAAGT...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR GCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTTTTGGGATGAAGGGATaGTCAGATGGTAAAGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GCSQSHLWARMAKNHLFFFGMKG*SDGKVL Trigger: TAAGACTTTACCATCTGAGCATCCCTTCATCCCAAA...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 90 bp | CTTGTTTCTGAGACAGACAAATTTTACCTTCTACCATCCATCAACTaGAACTTTGAAAGTTCAAGATTGACAGCCCTGAGCTTATTAACC | + |
|
Preference number: 2 (lower is better) Translates to: LVSETDKFYLLPSIN*NFESSRLTALSLLT Trigger: GGTTAATAAGCTCAGGGCTGTCAATCTTGAACTTTCAAAGTTCAAGTTGATGGATGGTAGAAGGTAAAATTTGTCTGTCTCAGAAACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GGTAGAACCCTCAGCTCCTCCAGTGCCATGCCTGCCTaGATGCTGCCATGCCCCGCCTTGATGATAATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRTLSSSSAMPA*MLPCPALMIMD Trigger: GTCCATTATCATCAAGGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACTGGAGGAGCTGAGGGTTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | CAAGCAGGCATCTGGTGGTACTGGTTCCTGCTGTTCTaGTGGAGACCTTTCTGTTCCCCATCCTCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QAGIWWYWFLLF*WRPFCSPSSSC Trigger: ACAGCTGGAGGATGGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | GACACCCTAACCCAACGCAATGTCTCTGGAGGGTTCTaGGACTCAGTGAACCCACAATGCCAGGCATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTLTQRNVSGGF*DSVNPQCQAYR Trigger: TCTGTATGCCTGGCATTGTGGGTTCACTGAGTCTCAGAACCCTCCAGAGACATTGCGTTGGGTTAGGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | CAGTGCAAAAGAGCCAGCCTTTTCCTAGCTGACTTCTaGAAGAGAGGTAGAACCCTCAGCTCCTCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QCKRASLFLADF*KRGRTLSSSSA Trigger: GGCACTGGAGGAGCTGAGGGTTCTACCTCTCTTTCAGAAGTCAGCTAGGAAAAGGCTGGCTCTTTTGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | AAGCTGGAGCCAGACACGGAGTATCTGGTAGCAAACTaGACTGTGTTATCAGTCCTCTCAGGGGAAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLEPDTEYLVAN*TVLSVLSGEAS Trigger: GGAAGCTTCCCCTGAGAGGACTGATAACACAGTCCAGTTTGCTACCAGATACTCCGTGTCTGGCTCCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GTGACAGAGGGCAGAAAGCCACAGCTTCCAGCCCGATaGATAATCACATCTTCATTCCACCCTCAGCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTEGRKPQLPAR*IITSSFHPQPS Trigger: ACTTGGCTGAGGGTGGAATGAAGATGTGATTATCCATCGGGCTGGAAGCTGTGGCTTTCTGCCCTCTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCACTGTGGGTGTGGGTTTaGAAGCTCTGCCAGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPPVCWMTATVSHTENAPLWVWV*KLCQCK Trigger: TTTGCACTGGCAGAGCTTCAAAACCCACACCCACAG...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | TGCAAGTCTCTCTCTTTATGTTCCCCCTCAGAGCTTTaGTGGCTTGGTGAAGCTGGAGCCAGACACGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CKSLSLCSPSEL*WLGEAGARHGV Trigger: TACTCCGTGTCTGGCTCCAGCTTCACCAAGCCATCAAAGCTCTGAGGGGGAACATAAAGAGAGAGACTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | GAAGATGCCAGAGGGAGCTTCCTGATTGCATGTCAGTaGCGAGCACACAGGTTTTACTGTCAGCCTTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EDARGSFLIACQ*RAHRFYCQPFH Trigger: GTGGAAAGGCTGACAGTAAAACCTGTGTGCTCGTCACTGACATGCAATCAGGAAGCTCCCTCTGGCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GTGCAGGTGCTTTGGTCCTCAAGTCTTTTTACCTGTTaGGATAGTGGAGACAGTGCCTGCTTGTCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VQVLWSSSLFTC*DSGDSACLSQD Trigger: GTCCTGAGACAAGCAGGCACTGTCTCCACTATCCCAACAGGTAAAAAGACTTGAGGACCAAAGCACCTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | GTTTGTTTTGAGAAGGGGGTCTCATGTAGCCCAGGTTaGGGTGGAAGCTACCATTCTCCTCTCTCCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VCFEKGVSCSPG*GGSYHSPLSIF Trigger: GAAGATGGAGAGAGGAGAATGGTAGCTTCCACCTCAACCTGGGCTACATGAGACCCCCTTCTCAAAACAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | GAAGGACAGGGGAAATGTGGCCAACTCCAGCCAACCTaGGTTCTGCTTCCAGATTCACAGACACATGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: EGQGKCGQLQPT*VLLPDSQTHGL Trigger: TAATCCATGTGTCTGTGAATCTGGAAGCAGAACTCAGGTTGGCTGGAGTTGGCCACATTTCCCCTGTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | CAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATaGTCACAGAGTCATTTGTGGGCTAGAATGGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVLDVVGKPGAG*SQSHLWARMAK Trigger: TTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | AACAACCAAGATAGACAAGCAGGCATCTGGTGGTACTaGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NNQDRQAGIWWY*FLLFWWRPFCS Trigger: GGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTGTCTATCTTGGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GGGAAAAACAACCAAGATAGACAAGCAGGCATCTGGTaGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GKNNQDRQAGIW*YWFLLFWWRPF Trigger: GAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTGTCTATCTTGGTTGTTTTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | ATGGAGACCCTAAAGGAAGCAGGTCTTAGATGTGGTTaGGAAGCCAGGAGCAGGATGCTCACAGAGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: METLKEAGLRCG*EARSRMLTESF Trigger: AAATGACTCTGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAGGGTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | CCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTaGAAATGCACCATCAGAATCAGAATTCCTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PSMLDDSYCVPH*KCTIRIRIPGT Trigger: GGTGCCAGGAATTCTGATTCTGATGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | TCAACATCACACAAACAGCTCTATTCAGTCACTGCATaGAGGACAGGGGAAATGTGGCCAACTCCAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: STSHKQLYSVTA*RTGEMWPTPAN Trigger: GTTGGCTGGAGTTGGCCACATTTCCCCTGTCCTTCATGCAGTGACTGAATAGAGCTGTTTGTGTGATGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | GACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTaGCCACACTTGTTTCTGAGACAGACAAATTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: DPHLFLCLVVSQ*PHLFLRQTNFT Trigger: GGTAAAATTTGTCTGTCTCAGAAACAAGTGTGGGCACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | ATTGGGAAAAACAACCAAGATAGACAAGCAGGCATCTaGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: IGKNNQDRQAGI*WYWFLLFWWRP Trigger: AGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCTGCTTGTCTATCTTGGTTGTTTTTCCCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GGTTTGTATATGCTTGAACCAGGGAGTGGCACTATTTaGAGGTGTGGCCTGGTTGGAGAAAGTACATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GLYMLEPGSGTI*RCGLVGESTSL Trigger: CAGTGATGTACTTTCTCCAACCAGGCCACACCTCCAAATAGTGCCACTCCCTGGTTCAAGCATATACAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GGTTTGAACAGTGTCTCTGTCCCTGTGCAGGTGCTTTaGTCCTCAAGTCTTTTTACCTGTTGGGATAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLNSVSVPVQVL*SSSLFTCWDSG Trigger: TCCACTATCCCAACAGGTAAAAAGACTTGAGGACCAAAGCACCTGCACAGGGACAGAGACACTGTTCAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCATGGTCAACAGTGACTTaGCCCCTGAAATGCATATTT | + |
|
Preference number: 3 (lower is better) Translates to: WPPVCWMTATVSHTENAPWSTVT*PLKCIF Trigger: AAATATGCATTTCAGGGGCAAAGTCACTGTTGACCA...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCATGCAAGTTTGGCCCATaGTTATTAGAACTTCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: WPPVCWMTATVSHTENAPCKFGP*LLELLH Trigger: GTGTAGAAGTTCTAATAACAATGGGCCAAACTTGCA...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | GCCATGCCCCGCCTTGATGATAATGGACTGAACCTCTaGACTTGTAAGCCAGCCTCAATTAAAGTTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AMPRLDDNGLNL*TCKPASIKVCP Trigger: AGGACAAACTTTAATTGAGGCTGGCTTACAAGTTCAGAGGTTCAGTCCATTATCATCAAGGCGGGGCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | CATTCCACCCTCAGCCAAGTGATCCAGGCAGCTTGGTaGTCCCACAACTTATTTATACACAGAACATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: HSTLSQVIQAAW*SHNLFIHRTWT Trigger: TGTCCATGTTCTGTGTATAAATAAGTTGTGGGATCACCAAGCTGCCTGGATCACTTGGCTGAGGGTGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | CTAATGTACAGAAGATGCCAGAGGGAGCTTCCTGATTaGATGTCAGTGACGAGCACACAGGTTTTACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LMYRRCQRELPD*MSVTSTQVLLS Trigger: TGACAGTAAAACCTGTGTGCTCGTCACTGACATGCAATCAGGAAGCTCCCTCTGGCATCTTCTGTACATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | TACATCAACATCACACAAACAGCTCTATTCAGTCACTaGATGAAGGACAGGGGAAATGTGGCCAACTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YINITQTALFSH*MKDRGNVANSS Trigger: GCTGGAGTTGGCCACATTTCCCCTGTCCTTCATGCAGTGACTGAATAGAGCTGTTTGTGTGATGTTGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | GACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTaGACTGCTGGTTTGAACAGTGTCTCTGTCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DILCKEPEVIGA*TAGLNSVSVPV Trigger: CACAGGGACAGAGACACTGTTCAAACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | ACCATCAGAATCAGAATTCCTGGCACCTGTAGTCTCTaGGAATTGACAGGTACGGATCACAATTCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TIRIRIPGTCSL*ELTGTDHNSAD Trigger: GTCTGCAGAATTGTGATCCGTACCTGTCAATTCCCAGAGACTACAGGTGCCAGGAATTCTGATTCTGATGGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | CATCTCTGTACACTCTGCTGTGATGGTATTCACAACTaGCAAAGGCTACTCAATGGAGACCCTAAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLCTLCCDGIHN*QRLLNGDPKGS Trigger: GCTTCCTTTAGGGTCTCCATTGAGTAGCCTTTGCCAGTTGTGAATACCATCACAGCAGAGTGTACAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | ATATATATGTGTGTCATATCCTATAAGCTGTCATTCACTGCTCCTGATAGCAGCCAGAGCTTTGATGGCTaGGTGAAGCTGGAGCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IYMCVISYKLSFTAPDSSQSFDG*VKLEPD Trigger: GTCTGGCTCCAGCTTCACCAAGCCATCAAAGCTCTG...GCTGCTATCAGGAGCAGTGAATGACAGCTTATAGGATATGACACACATATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCCTCTTTGTGTCCCCCGTGAATACCTCACACTaGTCAAAGCACATCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FYSLRKAHFLRLVLFVSPVNTSH*SKHIFS Trigger: GGAAAAGATGTGCTTTGACAAGTGTGAGGTATTCAC...GGGGGACACAAAGAGGACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | TTGCCCCTGAAATGCATATTTCTAATGTACAGAAGATaGCAGAGGGAGCTTCCTGATTGCATGTCAGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: LPLKCIFLMYRR*QRELPDCMSVT Trigger: CGTCACTGACATGCAATCAGGAAGCTCCCTCTGGCATCTTCTGTACATTAGAAATATGCATTTCAGGGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | CATGTCTTTCATAACAAATACAATCATTTCCACAGATaGCAGTCCCCACACACCAGCTTCAGGTTCGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HVFHNKYNHFHR*QSPHTSFRFAT Trigger: TGTGGCGAACCTGAAGCTGGTGTGTGGGGACTGGCATCTGTGGAAATGATTGTATTTGTTATGAAAGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCACTCTGCCAAAATCTTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTGCAGCCTCAGCATATTaGAGCTCAGCATACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LALCQNLKTETEATKECSAASAY*SSAYCL Trigger: CAGACAGTATGCTGAGCTCAAATATGCTGAGGCTGC...ACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAAGATTTTGGCAGAGTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTGGAGGTGTGGCCTGGTaGGAGAAAGTACATCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GCSQSHLWARMAKNHLFFGGVAW*EKVHHC Trigger: ACAGTGATGTACTTTCTCCAACCAGGCCACACCTCC...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTCCCATTTTCTCAGGCTaGTCCTCTTTGTGTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRQKLKPPKNVVKINGQSPIFSG*SSLCPP Trigger: TGGGGGACACAAAGAGGACAAGCCTGAGAAAATGGG...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | ATTTCTAATGTACAGAAGATGCCAGAGGGAGCTTCCTaGTTGCATGTCAGTGACGAGCACACAGGTTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: ISNVQKMPEGAS*LHVSDEHTGFT Trigger: AGTAAAACCTGTGTGCTCGTCACTGACATGCAATCAGGAAGCTCCCTCTGGCATCTTCTGTACATTAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | TGTGCCTGGTTGTCAGTCAGTGCCCACACTTGTTTCTaGGACAGACAAATTTTACCTTCTACCATCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CAWLSVSAHTCF*DRQILPSTIHQ Trigger: TTGATGGATGGTAGAAGGTAAAATTTGTCTGTCTCAGAAACAAGTGTGGGCACTGACTGACAACCAGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | ATGGATAATCACATCTTCATTCCACCCTCAGCCAAGTaGTCCAGGCAGCTTGGTGATCCCACAACTTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: MDNHIFIPPSAK*SRQLGDPTTYL Trigger: TAAATAAGTTGTGGGATCACCAAGCTGCCTGGATCACTTGGCTGAGGGTGGAATGAAGATGTGATTATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR GCA 72 bp | AGACATTTTTGGTCAACAGTGACTTTGCCCCTGAAATaGATATTTCTAATGTACAGAAGATGCCAGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RHFWSTVTLPLK*IFLMYRRCQRE Trigger: CTCCCTCTGGCATCTTCTGTACATTAGAAATATGCATTTCAGGGGCAAAGTCACTGTTGACCAAAAATGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGTTTATAAGAGTTGTCTaGGTCATGGTGTCTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ERQRQENQSFKICLGYRMFIRVV*VMVSVH Trigger: GTGAACAGACACCATGACCAAGACAACTCTTATAAA...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CCA 72 bp | GTCAGGGAAAATCCAAGCAAAAATCTAATTTGGAACTaGTTAGCAATAAATGGCCAAGTATCCACAGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRENPSKNLIWN*LAINGQVSTAR Trigger: CCTAGCTGTGGATACTTGGCCATTTATTGCTAACCAGTTCCAAATTAGATTTTTGCTTGGATTTTCCCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | AAATGTGACCAGAAGTCTCTGTTCACAGTAAAATTCTaGAGATCCCATAAGAAGAATTCCTGCAAGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KCDQKSLFTVKF*RSHKKNSCKFG Trigger: GCCAAACTTGCAGGAATTCTTCTTATGGGATCTTCAGAATTTTACTGTGAACAGAGACTTCTGGTCACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR TCA 72 bp | CAAATTTTACCTTCTACCATCCATCAACTTGAACTTTaGAAGTTCAAGATTGACAGCCCTGAGCTTATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QILPSTIHQLEL*KFKIDSPELIN Trigger: GTTAATAAGCTCAGGGCTGTCAATCTTGAACTTTCAAAGTTCAAGTTGATGGATGGTAGAAGGTAAAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCCATGCCTGCCTGGATGCTGCCATGCCCCGCCTTGATGATAATGGACAGTACAGGCCCACGGTaGCCAGGGCCGCGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSAMPAWMLPCPALMIMDSTGPR*PGPRRR Trigger: TCTTCGTCGCGGCCCTGGGCACCGTGGGCCTGTACT...GTCCATTATCATCAAGGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGCCATGCCTGCCTGGATGCTGCCATGCCCCGCCTTGATGATAATGGACCTTCTGCCTCCCCTCTaGCTGCTGCAGGAATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAMPAWMLPCPALMIMDLLPPL*LLQEYQ Trigger: CTGGTATTCCTGCAGCAGCCAGAGGGGAGGCAGAAG...GTCCATTATCATCAAGGCGGGGCATGGCAGCATCCAGGCAGGCATGGCACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCCCCCTGACGGGGGCGCTGTaGCAAGAAATGGCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHLVVLVPAVLVETFLFPLTGAL*QEMAWT Trigger: TGTCCAGGCCATTTCTTGCCACAGCGCCCCCGTCAG...GGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCCCCCCCGGGTCTTTCTGTTaGTGTCGCCGGCGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLVVLVPAVLVETFLFPPGSFC*CRRRKK Trigger: CTTCTTCCGCCGGCGACACCAACAGAAAGACCCGGG...GGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCCCCGGCAGAGGCAGGCCCTaGACTGACCAAGAACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLVVLVPAVLVETFLFPGRGRP*TDQELK Trigger: CTTCAGTTCTTGGTCAGTGCAGGGCCTGCCTCTGCC...GGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTCCTGGGGCCTGGGGCTaGATCTTGATGGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPACLRTHTCFCAWLSVSPGAWG*ILMAVS Trigger: AGAAACAGCCATCAAGATCCAGCCCCAGGCCCCAGG...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTCTTGAGTTTCAGCTTTaGGGACTCGCTGAGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPACLRTHTCFCAWLSVSLEFQL*GLAELP Trigger: CGGCAACTCAGCGAGTCCTCAAAGCTGAAACTCAAG...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCTTGGCCAGCGCCCACTaGGCCAAGTACAGGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVLASAH*AKYRPT Trigger: CGTGGGCCTGTACTTGGCGCAGTGGGCGCTGGCCAA...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCCTGAAACACTTCTGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCGGCACAAAGCAGACGTaGCATCTCCCTGGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKPETLLAPSMLDDSYCVGTKQT*HLPGWC Trigger: GCACCAACCAGGGAGATGCCACGTCTGCTTTGTGCC...GACACAGTAGCTGTCATCCAACATACTGGGGGCCAGAAGTGTTTCAGGCTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCCTGAAACACTTCTGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCTTCAGCCACAGGGTCTaGGCCATTCAGCACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KKPETLLAPSMLDDSYCVFSHRV*AIQHQQ Trigger: CTGTTGGTGCTGAATGGCTCAGACCCTGTGGCTGAA...GACACAGTAGCTGTCATCCAACATACTGGGGGCCAGAAGTGTTTCAGGCTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCACTCCCCTCTGGCTGCTaGAGGAATACCAGGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: WPPVCWMTATVSHTENAPLPSGC*RNTRSL Trigger: TAATGACCTGGTATTCCTGCAGCAGCCAGAGGGGAG...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGGTGCTTTTCTTCCGTaGGGACTTGAGTTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPACLRTHTCFCAWLSVSGAFLP*GLEFQL Trigger: AAGCTGAAACTCAAGTCCCCACGGAAGAAAAGCACC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATGGAGCACCCATCCTGTaGGATCTGCAGGACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYGAPIL*DLQDQL Trigger: GAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTCC...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGAAGCAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATGCTCACAGTCCAGGTGAATGGTTaGTATCCCCAACAGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKEAGLRCGWEARSRMLTVQVNG*YPQQTF Trigger: GAAGGTCTGTTGGGGATAGCAACCATTCACCTGGAC...TGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTGGCACTCCGAGCCTGTaGCAGAGGCAGGCCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRQKLKPPKNVVKINGQSGTPSL*QRQALH Trigger: GTGCAGGGCCTGCCTCTGCCACAGGCTCGGAGTGCC...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | ATGACCAAACGTGAAAAGAGGGCCAGGGAAATAGTCAGTTCAGTGGACAAGGACGGCTTCAGTGGCCTCTaGATGGCACAAAGCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: MTKREKRAREIVSSVDKDGFSGL*MAQSRR Trigger: ACGTCTGCTTTGTGCCATCCAGAGGCCACTGAAGCC...GTCCTTGTCCACTGAACTGACTATTTCCCTGGCCCTCTTTTCACGTTTGGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | CTCTCTCTTTATGTTCCCCCTCAGAGCTTTGATGGCTaGGTGAAGCTGGAGCCAGACACGGAGTATCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLYVPPQSFDG*VKLEPDTEYLV Trigger: TACCAGATACTCCGTGTCTGGCTCCAGCTTCACCAAGCCATCAAAGCTCTGAGGGGGAACATAAAGAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | CCGGGCCCAGTGGCTCAGGCCTGTATTCACTGTAACTaGAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPVAQACIHCN*RDKGRRIRVSR Trigger: TCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTCAAGTTACAGTGAATACAGGCCTGAGCCACTGGGCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCATCTCCTGGGTTGACTTaGCTACACTGGATACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WPPVCWMTATVSHTENAPSPGLT*LHWIPS Trigger: AGAAGGTATCCAGTGTAGTCAAGTCAACCCAGGAGA...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCGACTCTGAGCTTCTTTaGCCTGCGTGGGTTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVDSELL*PAWVWC Trigger: GCACCAAACCCACGCAGGTCAAAGAAGCTCAGAGTC...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | AGTAAATCTGGAAGTTCCTGGCACAATCTGCATAGAACACACTTAGTATTTGCAGGAGGGCAGGGTTCCTaGGCAGTGGAGGAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSGSSWHNLHRTHLVFAGGQGS*AVEEGH Trigger: GTGCCCTTCCTCCACTGCTCAGGAACCCTGCCCTCC...TGCAAATACTAAGTGTGTTCTATGCAGATTGTGCCAGGAACTTCCAGATTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCCCCAGTATGTTGGATGACAGCTACTGTGTCCCACACTGAAAATGCACCACTAAATAGGTCCAGGTaGATGGTTGCTATCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WPPVCWMTATVSHTENAPLNRSR*MVAIPN Trigger: GTTGGGGATAGCAACCATTCACCTGGACCTATTTAG...TGGTGCATTTTCAGTGTGGGACACAGTAGCTGTCATCCAACATACTGGGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGATATGTCTGGGTTACAGAATGAATTACAGGGCAGCCCAAGCAACAACTCACCGTCAGGCTCCTaGAAGGCTGGTCCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQDMSGLQNELQGSPSNNSPSGS*KAGPLH Trigger: ATGGAGCGGACCAGCCTTGCAGGAGCCTGACGGTGA...GTTGTTGCTTGGGCTGCCCTGTAATTCATTCTGTAACCCAGACATATCTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTCGCCTGCTTCTCCCCTaGGGCCTGGGGCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQKLKPPKNVVKINGQSRLLLP*GLGLDL Trigger: AAGATCCAGCCCCAGGCCCCAGGGGAGAAGCAGGCG...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGAACAGGGGGAGGAGCTaGCCAGGATTTCAGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQRQENQSFKICLGYRMNRGRS*PGFQLP Trigger: GGGGAGCTGAAATCCTGGCCAGCTCCTCCCCCTGTT...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCTCAGTGGCCTCTGGATaGCACAAAGCAGACGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVSVASG*HKADVA Trigger: TGCCACGTCTGCTTTGTGCCATCCAGAGGCCACTGA...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGAAGCAGGTCTTAGATGTGGTTGGGAAGCCAGGAGCAGGATGCTCACACTCATTTTCTTCAGGTaGGGTAGTAGCAGAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKEAGLRCGWEARSRMLTLIFFR*GSSRGF Trigger: GAAGCCTCTGCTACTACCCCACCTGAAGAAAATGAG...TGTGAGCATCCTGCTCCTGGCTTCCCAACCACATCTAAGACCTGCTTCCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGCACCTTCTCCTGGGTTaGCTTGACTACACTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VYLKVKFSGPSGSGLYSLHLLLG*LDYTGY Trigger: GTATCCAGTGTAGTCAAGTCAACCCAGGAGAAGGTG...CAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | TTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCCTCTTTGTGTCCCCCGTGTGTTTGCCTCTGTaGCTGGTAAGCAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYSLRKAHFLRLVLFVSPVCLPL*LVSSFL Trigger: CAGAAAGCTGCTTACCAGGCACAGAGGCAAACACAC...GGGGGACACAAAGAGGACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTCAAGCCGCCTGCCACTaGTTCCCCCAGCTATCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LRQKLKPPKNVVKINGQSQAACH*FPQLSR Trigger: ACGGGATAGCTGGGGGAACCAGTGGCAGGCGGCTTG...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | CTAGCACTCTGCCAAAATCTTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTGAGCCCTTGGAGGTTTaGGAGGGCAGGGTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LALCQNLKTETEATKECSEPLEV*EGRVPE Trigger: CTCAGGAACCCTGCCCTCCCAAACCTCCAAGGGCTC...ACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAAGATTTTGGCAGAGTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AACATGGACATTTTATGTAAAGAGCCAGAGGTGATAGGAGCTTGCACTGCTGGTGACCACAGTCCCACATaGCATCACCGTACGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NMDILCKEPEVIGACTAGDHSPT*HHRTVL Trigger: AAGGACCGTACGGTGATGCCATGTGGGACTGTGGTC...ACCAGCAGTGCAAGCTCCTATCACCTCTGGCTCTTTACATAAAATGTCCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | CTAGCACTCTGCCAAAATCTTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCCTGGGGCTGGATCTTaGTGGCTGTTTCTGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LALCQNLKTETEATKECSPGAGS*WLFLGR Trigger: ACGTCCCAGAAACAGCCATCAAGATCCAGCCCCAGG...ACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAAGATTTTGGCAGAGTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAAGTCGCCCCCTTCTTCTaGCTCCCCTCTGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKVAPFF*LPSGCC Trigger: GCAGCAGCCAGAGGGGAGGCAGAAGAAGGGGGCGAC...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CCA 90 bp | GTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGATCACCACCTTCTCCTaGGTTGACTTGACTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLKVKFSGPSGSGLYSLITTFS*VDLTTL Trigger: CAGTGTAGTCAAGTCAACCCAGGAGAAGGTGGTGAT...CAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCTTCCGTGGGGACTTaGGTTTCAGCTTTGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYSSVGT*VSALRT Trigger: AGTCCTCAAAGCTGAAACTCAAGTCCCCACGGAAGA...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | AGTAAATCTGGAAGTTCCTGGCACAATCTGCATAGAACACACTTAGTATTTGCAGTCTCACCCACCACATaGCAGATCACCACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKSGSSWHNLHRTHLVFAVSPTT*QITTFS Trigger: GGAGAAGGTGGTGATCTGTCATGTGGTGGGTGAGAC...TGCAAATACTAAGTGTGTTCTATGCAGATTGTGCCAGGAACTTCCAGATTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAAAGGAGAATGTCTTGCTaGCGGGGGCGCTGTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKRRMSC*RGRCGK Trigger: CTTGCCACAGCGCCCCCGTCAGCAAGACATTCTCCT...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | CTAGCACTCTGCCAAAATCTTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTGCAGCATTGTGGTCCTaGGATAGTGAGGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LALCQNLKTETEATKECSAALWS*DSEVLE Trigger: CTCCAAGACCTCACTATCTCAGGACCACAATGCTGC...ACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAAGATTTTGGCAGAGTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR GCA 90 bp | AGCTTGGAGAAGGGATTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCAGGAGTCCTCCTTTATaGTTCTTCATAGCTCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLEKGFYSLRKAHFLRLVRSPPL*FFIAPS Trigger: GCTAGGAGCTATGAAGAAGCATAAAGGAGGACTCCT...GACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAATCCCTTCTCCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CCA 90 bp | GAGAGACAAAGGCAGGAGAATCAGAGTTTCAAGATATGTCTGGGTTACAGAATGCTTGATGGCTGTTTCTaGGACGTGGGTGAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ERQRQENQSFKICLGYRMLDGCF*DVGERP Trigger: TGGTCTTTCACCCACGTCCCAGAAACAGCCATCAAG...CATTCTGTAACCCAGACATATCTTGAAACTCTGATTCTCCTGCCTTTGTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAATTCTCCCCTGGGGCCTaGGGCTGGATCTTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKFSPGA*GWILMA Trigger: AGCCATCAAGATCCAGCCCCAGGCCCCAGGGGAGAA...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTAGGGTTCCTGAGCAGTaGAGGAAGGGCACTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSQSHLWARMAKNHLFFRVPEQ*RKGTVD Trigger: GTCTACAGTGCCCTTCCTCCACTGCTCAGGAACCCT...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | ATGATGATGATGATGATTGTGGAGGTTTGTATATGCTaGAACCAGGGAGTGGCACTATTTGGAGGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MMMMMIVEVCIC*NQGVALFGGVA Trigger: GGCCACACCTCCAAATAGTGCCACTCCCTGGTTCAAGCATATACAAACCTCCACAATCATCATCATCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CCA 90 bp | AGTAAATCTGGAAGTTCCTGGCACAATCTGCATAGAACACACTTAGTATTTGCAGACGTGGCATCTCCCTaGTTGGTGCTGTCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKSGSSWHNLHRTHLVFADVASP*LVLSIE Trigger: TTCTATGGACAGCACCAACCAGGGAGATGCCACGTC...TGCAAATACTAAGTGTGTTCTATGCAGATTGTGCCAGGAACTTCCAGATTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | CTGTTTCTGTGCCTGGTTGTCAGTCAGTGCCCACACTaGTTTCTGAGACAGACAAATTTTACCTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLCLVVSQCPH*FLRQTNFTFYH Trigger: ATGGTAGAAGGTAAAATTTGTCTGTCTCAGAAACAAGTGTGGGCACTGACTGACAACCAGGCACAGAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAAGCACTGACCAAGAACTaGAGGGTCTCACCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKALTKN*RVSPTT Trigger: TGTGGTGGGTGAGACCCTTCAGTTCTTGGTCAGTGC...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | ATATATATGTGTGTCATATCCTATAAGCTGTCATTCACTGCTCCTGATAGCAGCAAGAAAACTCTGCAGTaGCTGAGCCCAACACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYMCVISYKLSFTAPDSSKKTLQ*LSPTPS Trigger: GCTTGGTGTTGGGCTCAGTCACTGCAGAGTTTTCTT...GCTGCTATCAGGAGCAGTGAATGACAGCTTATAGGATATGACACACATATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR GCA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATGCAGCATTAACTAGGTaGTTGAAAAGATCCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYAALTR*LKRSSR Trigger: CCTTGAGGATCTTTTCAAGCACCTAGTTAATGCTGC...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CCA 90 bp | TTAAGACAGAAACTGAAGCCACCAAAGAATGTAGTCAAGATCAATGGACAGAGTAGGTCATTATGTGACTaGCTCAAGCCCGGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRQKLKPPKNVVKINGQSRSLCD*LKPGSF Trigger: GAAAGACCCGGGCTTGAGCCAGTCACATAATGACCT...ACTCTGTCCATTGATCTTGACTACATTCTTTGGTGGCTTCAGTTTCTGTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAACCATCCTGTGAGATCTaGAGGACCAGCTCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKPSCEI*RTSSLD Trigger: ATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGG...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTAGATCCCTGAAATTATaGTGGTGCTTTTCTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSQSHLWARMAKNHLFFRSLKL*WCFSSV Trigger: CACGGAAGAAAAGCACCATCATAATTTCAGGGATCT...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | GAGACAGACAAATTTTACCTTCTACCATCCATCAACTaGAACTTTGAAAGTTCAAGATTGACAGCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETDKFYLLPSIN*NFESSRLTALS Trigger: GCTCAGGGCTGTCAATCTTGAACTTTCAAAGTTCAAGTTGATGGATGGTAGAAGGTAAAATTTGTCTGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR TCA 90 bp | AGGTGCCAACTTTATAATTTTCCCACAGTAAACCAAAACCAGAATACCCTAAAATGCAATTTTAGTTCATaGGCCCTTGGAGGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCQLYNFPTVNQNQNTLKCNFSS*ALGGLG Trigger: TCCCAAACCTCCAAGGGCTCATGAACTAAAATTGCA...TTTTAGGGTATTCTGGTTTTGGTTTACTGTGGGAAAATTATAAAGTTGGCACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| 3UTR CAA 72 bp | TTGTGGGGATTCCTGGCTTTGGGAACCAACTTATTATaGATGGATCATTCTAGAACTTTGCAGTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWGFLALGTNLL*MDHSRTLQFFF Trigger: GAAAAAGAACTGCAAAGTTCTAGAATGATCCATCAATAATAAGTTGGTTCCCAAAGCCAGGAATCCCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| 3UTR CAA 72 bp | CTACCATCCATCAACTTGAACTTTGAAAGTTCAAGATaGACAGCCCTGAGCTTATTAACCAAAGAAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPSINLNFESSR*TALSLLTKENT Trigger: GGTGTTTTCTTTGGTTAATAAGCTCAGGGCTGTCAATCTTGAACTTTCAAAGTTCAAGTTGATGGATGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | GTCGCGCCTTGGCCAGCGCCCACTGCGCCAAGTACAGGCCCACGGTaGCCAGGGCCGCGACGAAGAGCGACACCAGGAAGAGCCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAPWPAPTAPSTGPR*PGPRRRATPGRATA Trigger: TGCAGTGGCTCTTCCTGGTGTCGCTCTTCGTCGCGGCCCTGGGCACCGTGGGCCTGTACTTGGCGCAGTGGGCGCTGGCCAAGGCGCGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | AGGAGCCGGCCGAGGGTCGCCCCCTTCTTCTGCCTCCCCTCTGGCTaGTGCAGGAATACCAGGTCATTATGTGACTGGCTCAAGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRPRVAPFFCLPSG*CRNTRSLCDWLKPG Trigger: CCCGGGCTTGAGCCAGTCACATAATGACCTGGTATTCCTGCAGCAGCCAGAGGGGAGGCAGAAGAAGGGGGCGACCCTCGGCCGGCTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | AGCAGCTTTCTGTTCAGGAGCCGGCCGAGGGTCGCCCCCTTCTTCTaGCTCCCCTCTGGCTGCTGCAGGAATACCAGGTCATTATGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSFLFRSRPRVAPFF*LPSGCCRNTRSLCD Trigger: GTCACATAATGACCTGGTATTCCTGCAGCAGCCAGAGGGGAGGCAGAAGAAGGGGGCGACCCTCGGCCGGCTCCTGAACAGAAAGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 90 bp | CATACAGCTGGCACTCCGAGCCTGTGGCAGAGGCAGGCCCTGCACTaGCCAAGAACTGAAGGGTCTCACCCACCACATGACAGATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HTAGTPSLWQRQALH*PRTEGSHPPHDRSP Trigger: TGGTGATCTGTCATGTGGTGGGTGAGACCCTTCAGTTCTTGGTCAGTGCAGGGCCTGCCTCTGCCACAGGCTCGGAGTGCCAGCTGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CCA 90 bp | CTGCAAGGATTGTGGCCGTGGGTCCTTCTGGAAAGAGAGACGCAGTaGACCCCCTCTCTTTTCGGCCTCATAGTTCAGGGCGGTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQGLWPWVLLERETQ*TPSLFGLIVQGGHP Trigger: TGGGTGACCGCCCTGAACTATGAGGCCGAAAAGAGAGGGGGTCCACTGCGTCTCTCTTTCCAGAAGGACCCACGGCCACAATCCTTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CCA 90 bp | TGCCTCCCCTCTGGCTGCTGCAGGAATACCAGGTCATTATGTGACTaGCTCAAGCCCGGGTCTTTCTGTTGGTGTCGCCGGCGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPSGCCRNTRSLCD*LKPGSFCWCRRRKK Trigger: CTTCTTCCGCCGGCGACACCAACAGAAAGACCCGGGCTTGAGCCAGTCACATAATGACCTGGTATTCCTGCAGCAGCCAGAGGGGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | GACATCATACAGCTGGCACTCCGAGCCTGTGGCAGAGGCAGGCCCTaGACTGACCAAGAACTGAAGGGTCTCACCCACCACATGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DIIQLALRACGRGRP*TDQELKGLTHHMTD Trigger: ATCTGTCATGTGGTGGGTGAGACCCTTCAGTTCTTGGTCAGTGCAGGGCCTGCCTCTGCCACAGGCTCGGAGTGCCAGCTGTATGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | ATGCAGGGCTCTCTGGGTACTCCATTCATAGTGTGTTTGCCTCTGTaGCTGGTAAGCAGCTTTCTGTTCAGGAGCCGGCCGAGGGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MQGSLGTPFIVCLPL*LVSSFLFRSRPRVA Trigger: GGCGACCCTCGGCCGGCTCCTGAACAGAAAGCTGCTTACCAGGCACAGAGGCAAACACACTATGAATGGAGTACCCAGAGAGCCCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCCCCGAAGAGGAGAATGTCTaGCTGACGGGGGCGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLVVLVPAVLVETFLFPEEENV*LTGALW Trigger: CCACAGCGCCCCCGTCAGCAAGACATTCTCCTCTTC...GGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 90 bp | GAAGTACTCAGGGAGCTCTCGGATAGTTCATCACCGTCAGGCTCCTaGAAGGCTGGTCCGCTCCATGATGCTACTGGAGACTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVLRELSDSSSPSGS*KAGPLHDATGDSFS Trigger: GGAGAAGGAGTCTCCAGTAGCATCATGGAGCGGACCAGCCTTGCAGGAGCCTGACGGTGATGAACTATCCGAGAGCTCCCTGAGTACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS GCA 90 bp | CAAAGCAGACGTGGCATCTCCCTGGTTGGTGCTGTCCATAGAAGCTaGGTAGTCCAGCATGAGGGCAGCATTGTGGTCCTTGGAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSRRGISLVGAVHRS*VVQHEGSIVVLGDP Trigger: GGGATCTCCAAGGACCACAATGCTGCCCTCATGCTGGACTACGCAGCTTCTATGGACAGCACCAACCAGGGAGATGCCACGTCTGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231575.2 |
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| CDS GCA 90 bp | TTCTTCCGTGGGGACTTGAGTTTCAGCTTTGAGGACTCGCTGAGTTaGCGAATGGCGACTTCAGCCACAGGGTCTGAGCCATTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FFRGDLSFSFEDSLS*RMATSATGSEPFST Trigger: GGTGCTGAATGGCTCAGACCCTGTGGCTGAAGTCGCCATTCGGCAACTCAGCGAGTCCTCAAAGCTGAAACTCAAGTCCCCACGGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 ENSMUST00000231903.2 |
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| CDS CCA 90 bp | CTCATTTTCTTCAGGTGGGGTAGTAGCAGAGGCTTCAGTGGCCTCTaGATGGCACAAAGCAGACGTGGCATCTCCCTGGTTGGTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFFRWGSSRGFSGL*MAQSRRGISLVGAV Trigger: GACAGCACCAACCAGGGAGATGCCACGTCTGCTTTGTGCCATCCAGAGGCCACTGAAGCCTCTGCTACTACCCCACCTGAAGAAAATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGTGGCATCTCCCTGGTaGGTGCTGTCCATAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPACLRTHTCFCAWLSVSVASPW*VLSIEA Trigger: AGCTTCTATGGACAGCACCAACCAGGGAGATGCCAC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CCA 90 bp | CTTGACTACACTGGATACCTTCTCAACTGTCAGCTGCAAGGATTGTaGCCGTGGGTCCTTCTGGAAAGAGAGACGCAGTGGACCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDYTGYLLNCQLQGL*PWVLLERETQWTPS Trigger: AGAGGGGGTCCACTGCGTCTCTCTTTCCAGAAGGACCCACGGCCACAATCCTTGCAGCTGACAGTTGAGAAGGTATCCAGTGTAGTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CCA 90 bp | TTTTCTTCAGGTGGGGTAGTAGCAGAGGCTTCAGTGGCCTCTGGATaGCACAAAGCAGACGTGGCATCTCCCTGGTTGGTGCTGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FSSGGVVAEASVASG*HKADVASPWLVLSI Trigger: TATGGACAGCACCAACCAGGGAGATGCCACGTCTGCTTTGTGCCATCCAGAGGCCACTGAAGCCTCTGCTACTACCCCACCTGAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTGCTTGTCTCAGGACCCACACCTGTTTCTGTGCCTGGTTGTCAGTCAGTGGTCCAGGTGAATGGTaGCTATCCCCAACAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPACLRTHTCFCAWLSVSGPGEW*LSPTDL Trigger: AAGGTCTGTTGGGGATAGCAACCATTCACCTGGACC...ACTGACTGACAACCAGGCACAGAAACAGGTGTGGGTCCTGAGACAAGCAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CAA 90 bp | ATGACCAAACGTGAAAAGAGGGCCAGGGAAATAGTCAGTTCAGTGGACAAGGACGCCCGGGTCTTTCTGTaGGTGTCGCCGGCGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MTKREKRAREIVSSVDKDARVFL*VSPAEE Trigger: TTCTTCCGCCGGCGACACCAACAGAAAGACCCGGGC...GTCCTTGTCCACTGAACTGACTATTTCCCTGGCCCTCTTTTCACGTTTGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 90 bp | CTGAAGGTCTGTGGGCCATTAGGCTGCTTCCTAAATAGGTCCAGGTaGATGGTTGCTATCCCCAACAGACCTTCTGAGGAGCACCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LKVCGPLGCFLNRSR*MVAIPNRPSEEHPS Trigger: GGATGGGTGCTCCTCAGAAGGTCTGTTGGGGATAGCAACCATTCACCTGGACCTATTTAGGAAGCAGCCTAATGGCCCACAGACCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
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| CDS CCA 90 bp | TACACTGGATACCTTCTCAACTGTCAGCTGCAAGGATTGTGGCCGTaGGTCCTTCTGGAAAGAGAGACGCAGTGGACCCCCTCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTGYLLNCQLQGLWP*VLLERETQWTPSLF Trigger: GAAAAGAGAGGGGGTCCACTGCGTCTCTCTTTCCAGAAGGACCCACGGCCACAATCCTTGCAGCTGACAGTTGAGAAGGTATCCAGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | AGGCATCTGGTGGTACTGGTTCCTGCTGTTCTGGTGGAGACCTTTCTGTTCCCCCCATTCATAGTGTGTTaGCCTCTGTGCCTGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLVVLVPAVLVETFLFPPFIVC*PLCLVS Trigger: GCTTACCAGGCACAGAGGCAAACACACTATGAATGG...GGGGAACAGAAAGGTCTCCACCAGAACAGCAGGAACCAGTACCACCAGATGCCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS TCA 90 bp | TTTCTCACTAGGGTGCTGATGAATCTCTGTTCAGGATCGTTCAGCTaGGCCACGCACACATGGCTAAGGCCTGAAGCACCAGGGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLTRVLMNLCSGSFS*ATHTWLRPEAPGWF Trigger: AAACCACCCTGGTGCTTCAGGCCTTAGCCATGTGTGCGTGGCTCAGCTGAACGATCCTGAACAGAGATTCATCAGCACCCTAGTGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000232165.2 |
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| CDS GCA 90 bp | TCCTGGGTTGACTTGACTACACTGGATACCTTCTCAACTGTCAGCTaGAAGGATTGTGGCCGTGGGTCCTTCTGGAAAGAGAGACGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SWVDLTTLDTFSTVS*KDCGRGSFWKERRS Trigger: ACTGCGTCTCTCTTTCCAGAAGGACCCACGGCCACAATCCTTGCAGCTGACAGTTGAGAAGGTATCCAGTGTAGTCAAGTCAACCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS GCA 90 bp | GCTATCCCCAACAGACCTTCTGAGGAGCACCCATCCTGTGAGATCTaGAGGACCAGCTCCTTGGATTTGGCGTTCAGTTCAAAGGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AIPNRPSEEHPSCEI*RTSSLDLAFSSKVN Trigger: ATTCACCTTTGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTCCTCAGAAGGTCTGTTGGGGATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS GCA 90 bp | CGGCGGAAGAAGAGCTTGGCACCTTTCCTTAGGAGTCCTCCTTTATaGTTCTTCATAGCTCCTAGCTCTGAAGTACTCAGGGAGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRKKSLAPFLRSPPL*FFIAPSSEVLRELS Trigger: CGAGAGCTCCCTGAGTACTTCAGAGCTAGGAGCTATGAAGAAGCATAAAGGAGGACTCCTAAGGAAAGGTGCCAAGCTCTTCTTCCGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS TCA 90 bp | AATTATGATGGTGCTTTTCTTCCGTGGGGACTTGAGTTTCAGCTTTaGGGACTCGCTGAGTTGCCGAATGGCGACTTCAGCCACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NYDGAFLPWGLEFQL*GLAELPNGDFSHRV Trigger: GACCCTGTGGCTGAAGTCGCCATTCGGCAACTCAGCGAGTCCTCAAAGCTGAAACTCAAGTCCCCACGGAAGAAAAGCACCATCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS CCA 90 bp | AGGTTTGGTCTTCACAGCAGTGACAGTGGTGACCACAGTCCCACATaGCATCACCGTACGGTCCTTTTCTATCTTTGCAGCAGAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RFGLHSSDSGDHSPT*HHRTVLFYLCSRNR Trigger: CCTGTTTCTGCTGCAAAGATAGAAAAGGACCGTACGGTGATGCCATGTGGGACTGTGGTCACCACTGTCACTGCTGTGAAGACCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
||
| CDS TCA 90 bp | TGCGTAGTCCAGCATGAGGGCAGCATTGTGGTCCTTGGAGATCCCTaGAATTATGATGGTGCTTTTCTTCCGTGGGGACTTGAGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CVVQHEGSIVVLGDP*NYDGAFLPWGLEFQ Trigger: CTGAAACTCAAGTCCCCACGGAAGAAAAGCACCATCATAATTTCAGGGATCTCCAAGGACCACAATGCTGCCCTCATGCTGGACTACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231575.2 |
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| CDS-3UTR CAA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTGTCAGCTGCAAGGATaGTGGCCGTGGGTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYCQLQG*WPWVLL Trigger: CAGAAGGACCCACGGCCACAATCCTTGCAGCTGACA...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CAA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTTAGTTCATGAGCCCTaGGAGGTTTGGGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYLVHEP*EVWEGR Trigger: CCTGCCCTCCCAAACCTCCAAGGGCTCATGAACTAA...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | TTTTATAGTCTGAGGAAGGCCCATTTTCTCAGGCTTGTCCTCTTTGTGTCCCCCGTGTCAAACCGAGGTTaGGTCTTCACAGCAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FYSLRKAHFLRLVLFVSPVSNRG*VFTAVT Trigger: TGTCACTGCTGTGAAGACCAAACCTCGGTTTGACAC...GGGGGACACAAAGAGGACAAGCCTGAGAAAATGGGCCTTCCTCAGACTATAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | GTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATTCACTGTTCTTCCGTGGGGACTaGAGTTTCAGCTTTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VYLKVKFSGPSGSGLYSLFFRGD*SFSFED Trigger: GTCCTCAAAGCTGAAACTCAAGTCCCCACGGAAGAA...CAGTGAATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | ATGACCAAACGTGAAAAGAGGGCCAGGGAAATAGTCAGTTCAGTGGACAAGGACTTGACCTGCGTGGGTTaGGTGCTCAGAAAAACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MTKREKRAREIVSSVDKDLTCVG*VLRKTD Trigger: ATCTGTTTTTCTGAGCACCAAACCCACGCAGGTCAA...GTCCTTGTCCACTGAACTGACTATTTCCCTGGCCCTCTTTTCACGTTTGGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | TCAAATGTTTATTTGAAAGTAAAGTTCTCCGGGCCCAGTGGCTCAGGCCTGTATGGTCCTTTTCTATCTTaGCAGCAGAAACAGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNVYLKVKFSGPSGSGLYGPFLS*QQKQGE Trigger: CTCCCCCTGTTTCTGCTGCAAAGATAGAAAAGGACC...ATACAGGCCTGAGCCACTGGGCCCGGAGAACTTTACTTTCAAATAAACATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS-3UTR CAA 90 bp | ATGGCTTCAAAGATGCAAGTCTCTCTCTTTATGTTCCCCCTCAGAGCTTTGATGGAAAGACCACCTGATTaGTATGTCCTCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MASKMQVSLFMFPLRALMERPPD*YVLSLL Trigger: GAGAAGAGAGAGGACATACAAATCAGGTGGTCTTTC...CATCAAAGCTCTGAGGGGGAACATAAAGAGAGAGACTTGCATCTTTGAAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | GGATGCTCACAGAGTCATTTGTGGGCTAGAATGGCTAAAAATCATTTGTTCTTTTGCAGGACCAGCTCCTaGGATTTGGCGTTCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCSQSHLWARMAKNHLFFCRTSS*DLAFSS Trigger: TGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCA...AAAGAACAAATGATTTTTAGCCATTCTAGCCCACAAATGACTCTGTGAGCATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATGTGTGTCATATCCTATAAGCTGTCATTCACTGCTCCTGATAGCAGCGCATTAACTAGGTGCTaGAAAAGATCCTCAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IYMCVISYKLSFTAPDSSALTRC*KRSSRA Trigger: AGCCCTTGAGGATCTTTTCAAGCACCTAGTTAATGC...GCTGCTATCAGGAGCAGTGAATGACAGCTTATAGGATATGACACACATATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 90 bp | CTTAGCTCATCCGGCTCCGCCCGCCGCCGGGGCGGGGGTCGCGCCTaGGCCAGCGCCCACTGCGCCAAGTACAGGCCCACGGTGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSSGSARRRGGGRA*ASAHCAKYRPTVPR Trigger: CCTGGGCACCGTGGGCCTGTACTTGGCGCAGTGGGCGCTGGCCAAGGCGCGACCCCCGCCCCGGCGGCGGGCGGAGCCGGATGAGCTAAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS GCA 72 bp | CAGCTGGCACTCCGAGCCTGTGGCAGAGGCAGGCCCTaGACTGACCAAGAACTGAAGGGTCTCACCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLALRACGRGRP*TDQELKGLTHH Trigger: GTGGTGGGTGAGACCCTTCAGTTCTTGGTCAGTGCAGGGCCTGCCTCTGCCACAGGCTCGGAGTGCCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 72 bp | GGCACTCCGAGCCTGTGGCAGAGGCAGGCCCTGCACTaGCCAAGAACTGAAGGGTCTCACCCACCACATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTPSLWQRQALH*PRTEGSHPPHD Trigger: GTCATGTGGTGGGTGAGACCCTTCAGTTCTTGGTCAGTGCAGGGCCTGCCTCTGCCACAGGCTCGGAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 72 bp | CCGAGGGTCGCCCCCTTCTTCTGCCTCCCCTCTGGCTaGTGCAGGAATACCAGGTCATTATGTGACTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVAPFFCLPSG*CRNTRSLCDWL Trigger: GAGCCAGTCACATAATGACCTGGTATTCCTGCAGCAGCCAGAGGGGAGGCAGAAGAAGGGGGCGACCCTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 72 bp | GACCTTCACTGTGACGGGTGTCCTCACAGGGGACTCTaGGTTCAGTGGGGTTGCCCTCCCAGTGTCAAACCG | + |
|
Preference number: 6 (lower is better) Translates to: DLHCDGCPHRGL*VQWGCPPSVKP Trigger: CGGTTTGACACTGGGAGGGCAACCCCACTGAACTCAGAGTCCCCTGTGAGGACACCCGTCACAGTGAAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 90 bp | GGGTCTGAGTTCAGTGGGGTTGCCCTCCCAGTGTCAAACCGAGGTTaGGTCTTCACAGCAGTGACAGTGGTGACCACAGTCCCACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSEFSGVALPVSNRG*VFTAVTVVTTVPHG Trigger: GCCATGTGGGACTGTGGTCACCACTGTCACTGCTGTGAAGACCAAACCTCGGTTTGACACTGGGAGGGCAACCCCACTGAACTCAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231903.2 |
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| CDS TCA 72 bp | ATCACCGTCAGGCTCCTGCAAGGCTGGTCCGCTCCATaGTGCTACTGGAGACTCCTTCTCCAGTTCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ITVRLLQGWSAP*CYWRLLLQFPG Trigger: TCCTGGGAACTGGAGAAGGAGTCTCCAGTAGCATCATGGAGCGGACCAGCCTTGCAGGAGCCTGACGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
||
| CDS GCA 72 bp | CGTGGCATCTCCCTGGTTGGTGCTGTCCATAGAAGCTaGGTAGTCCAGCATGAGGGCAGCATTGTGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGISLVGAVHRS*VVQHEGSIVVL Trigger: CAGGACCACAATGCTGCCCTCATGCTGGACTACGCAGCTTCTATGGACAGCACCAACCAGGGAGATGCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS GCA 72 bp | AGGGAGCTCTCGGATAGTTCATCACCGTCAGGCTCCTaGAAGGCTGGTCCGCTCCATGATGCTACTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RELSDSSSPSGS*KAGPLHDATGD Trigger: GTCTCCAGTAGCATCATGGAGCGGACCAGCCTTGCAGGAGCCTGACGGTGATGAACTATCCGAGAGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS CCA 72 bp | TTGTGGCCGTGGGTCCTTCTGGAAAGAGAGACGCAGTaGACCCCCTCTCTTTTCGGCCTCATAGTTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWPWVLLERETQ*TPSLFGLIVQG Trigger: GCCCTGAACTATGAGGCCGAAAAGAGAGGGGGTCCACTGCGTCTCTCTTTCCAGAAGGACCCACGGCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CAA 72 bp | CGGGTGTCCTCACAGGGGACTCTGAGTTCAGTGGGGTaGCCCTCCCAGTGTCAAACCGAGGTTTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSSQGTLSSVG*PSQCQTEVWSS Trigger: TGAAGACCAAACCTCGGTTTGACACTGGGAGGGCAACCCCACTGAACTCAGAGTCCCCTGTGAGGACACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CAA 90 bp | GACTCTGAGTTCAGTGGGGTTGCCCTCCCAGTGTCAAACCGAGGTTaGGTCTTCACAGCAGTGACAGTGGTGACCACAGTCCCACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: DSEFSGVALPVSNRG*VFTAVTVVTTVPHG Trigger: GCCATGTGGGACTGTGGTCACCACTGTCACTGCTGTGAAGACCAAACCTCGGTTTGACACTGGGAGGGCAACCCCACTGAACTCAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 72 bp | CCCCTCTGGCTGCTGCAGGAATACCAGGTCATTATGTaGCTGGCTCAAGCCCGGGTCTTTCTGTTGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PLWLLQEYQVIM*LAQARVFLLVS Trigger: CGACACCAACAGAAAGACCCGGGCTTGAGCCAGTCACATAATGACCTGGTATTCCTGCAGCAGCCAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS TCA 72 bp | ACCTTCACTGTGACGGGTGTCCTCACAGGGGACTCTTaGGGCCCTGCAGTTATTACTGGCTGTAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFTVTGVLTGDS*GPAVITGCSWA Trigger: AGCCCAGCTACAGCCAGTAATAACTGCAGGGCCTCAAGAGTCCCCTGTGAGGACACCCGTCACAGTGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231903.2 |
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| CDS GCA 72 bp | CGTGGCATCTCCCTGGTTGGTGCTGTCCATAGAAGCTaGGTAGTCCAGCATGAGGGCAGCATTGTGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGISLVGAVHRS*VVQHEGSIVVL Trigger: AAGGACCACAATGCTGCCCTCATGCTGGACTACGCAGCTTCTATGGACAGCACCAACCAGGGAGATGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231575.2 |
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| CDS CCA 72 bp | TCTGGCTGCTGCAGGAATACCAGGTCATTATGTGACTaGCTCAAGCCCGGGTCTTTCTGTTGGTGTCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCCRNTRSLCD*LKPGSFCWCRR Trigger: CCGGCGACACCAACAGAAAGACCCGGGCTTGAGCCAGTCACATAATGACCTGGTATTCCTGCAGCAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CAA 90 bp | GAGCCATTCAGCACCAACAGTTCCGTGTCTGAAGAGGAGAATGTCTaGCTGACGGGGGCGCTGTGGCAAGAAATGGCCTGGACAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EPFSTNSSVSEEENV*LTGALWQEMAWTEM Trigger: CATCTCTGTCCAGGCCATTTCTTGCCACAGCGCCCCCGTCAGCAAGACATTCTCCTCTTCAGACACGGAACTGTTGGTGCTGAATGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
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| CDS TCA 72 bp | CTCCCCAGGTTCTACGTAAGAAAACTCTGCAGTGACTaGGCCCAACACCAAGCTGTCAGGCTCTGTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LPRFYVRKLCSD*AQHQAVRLCPT Trigger: AGTGGGACAGAGCCTGACAGCTTGGTGTTGGGCTCAGTCACTGCAGAGTTTTCTTACGTAGAACCTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
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| CDS TCA 72 bp | GGTGCTTTTCTTCCGTGGGGACTTGAGTTTCAGCTTTaGGGACTCGCTGAGTTGCCGAATGGCGACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAFLPWGLEFQL*GLAELPNGDFS Trigger: GCTGAAGTCGCCATTCGGCAACTCAGCGAGTCCTCAAAGCTGAAACTCAAGTCCCCACGGAAGAAAAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS GCA 72 bp | TCTCTGGGTACTCCATTCATAGTGTGTTTGCCTCTGTaGCTGGTAAGCAGCTTTCTGTTCAGGAGCCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLGTPFIVCLPL*LVSSFLFRSRP Trigger: CGGCCGGCTCCTGAACAGAAAGCTGCTTACCAGGCACAGAGGCAAACACACTATGAATGGAGTACCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CCA 72 bp | GCCTGGGGCTGGATCTTGATGGCTGTTTCTGGGACGTaGGTGAAAGACCACCTGATTTGTATGTCCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AWGWILMAVSGT*VKDHLICMSSL Trigger: GAGAGAGGACATACAAATCAGGTGGTCTTTCACCCACGTCCCAGAAACAGCCATCAAGATCCAGCCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000232165.2 |
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| CDS CAA 72 bp | TCCCACATGGCATCACCGTACGGTCCTTTTCTATCTTaGCAGCAGAAACAGGGGGAGGAGCTGGCCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SHMASPYGPFLS*QQKQGEELARI Trigger: AATCCTGGCCAGCTCCTCCCCCTGTTTCTGCTGCAAAGATAGAAAAGGACCGTACGGTGATGCCATGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
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| CDS CAA 90 bp | GAGGAGCACCCATCCTGTGAGATCTGCAGGACCAGCTCCTTGGATTaGGCGTTCAGTTCAAAGGTGAATTCCTCCTCCCAACTGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EEHPSCEICRTSSLD*AFSSKVNSSSQLRS Trigger: TGACCTCAGTTGGGAGGAGGAATTCACCTTTGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS CAA 90 bp | CCTTCTGAGGAGCACCCATCCTGTGAGATCTGCAGGACCAGCTCCTaGGATTTGGCGTTCAGTTCAAAGGTGAATTCCTCCTCCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSEEHPSCEICRTSS*DLAFSSKVNSSSQL Trigger: CAGTTGGGAGGAGGAATTCACCTTTGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTCCTCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
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| CDS GCA 72 bp | AACAGACCTTCTGAGGAGCACCCATCCTGTGAGATCTaGAGGACCAGCTCCTTGGATTTGGCGTTCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NRPSEEHPSCEI*RTSSLDLAFSS Trigger: TGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTCCTCAGAAGGTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
||
| CDS CCA 72 bp | GGTCTTTCTGTTGGTGTCGCCGGCGGAAGAAGAGCTTaGCACCTTTCCTTAGGAGTCCTCCTTTATGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLSVGVAGGRRA*HLSLGVLLYAS Trigger: AGAAGCATAAAGGAGGACTCCTAAGGAAAGGTGCCAAGCTCTTCTTCCGCCGGCGACACCAACAGAAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 72 bp | GAGCACCCATCCTGTGAGATCTGCAGGACCAGCTCCTaGGATTTGGCGTTCAGTTCAAAGGTGAATTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EHPSCEICRTSS*DLAFSSKVNSS Trigger: GGAGGAATTCACCTTTGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGGGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 90 bp | GACTCCTTCTCCAGTTCCCAGGAATCTAGATCATTTTCTCTAGGCTaGAGGGCAGGTAGGGTCTGGGCTGGCTCATTTTCTTCAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DSFSSSQESRSFSLG*RAGRVWAGSFSSGG Trigger: CCCACCTGAAGAAAATGAGCCAGCCCAGACCCTACCTGCCCTCAAGCCTAGAGAAAATGATCTAGATTCCTGGGAACTGGAGAAGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS TCA 72 bp | CAGTGGAGGAAGGGCACTGTAGACTCTGAGCTTCTTTaGCCTGCGTGGGTTTGGTGCTCAGAAAAACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: QWRKGTVDSELL*PAWVWCSEKQM Trigger: CATCTGTTTTTCTGAGCACCAAACCCACGCAGGTCAAAGAAGCTCAGAGTCTACAGTGCCCTTCCTCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000232165.2 |
||
| CDS TCA 72 bp | TGTGGGCCATTAGGCTGCTTCCTAAATAGGTCCAGGTaGATGGTTGCTATCCCCAACAGACCTTCTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGPLGCFLNRSR*MVAIPNRPSEE Trigger: CTCCTCAGAAGGTCTGTTGGGGATAGCAACCATTCACCTGGACCTATTTAGGAAGCAGCCTAATGGCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231903.2 |
||
| CDS GCA 72 bp | GACTTGACTACACTGGATACCTTCTCAACTGTCAGCTaGAAGGATTGTGGCCGTGGGTCCTTCTGGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DLTTLDTFSTVS*KDCGRGSFWKE Trigger: CTCTTTCCAGAAGGACCCACGGCCACAATCCTTGCAGCTGACAGTTGAGAAGGTATCCAGTGTAGTCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 72 bp | CCATCCTGTGAGATCTGCAGGACCAGCTCCTTGGATTaGGCGTTCAGTTCAAAGGTGAATTCCTCCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSCEICRTSSLD*AFSSKVNSSSQ Trigger: TTGGGAGGAGGAATTCACCTTTGAACTGAACGCCAAATCCAAGGAGCTGGTCCTGCAGATCTCACAGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS CAA 72 bp | ATGCAGGGCTCTCTGGGTACTCCATTCATAGTGTGTTaGCCTCTGTGCCTGGTAAGCAGCTTTCTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MQGSLGTPFIVC*PLCLVSSFLFR Trigger: CCTGAACAGAAAGCTGCTTACCAGGCACAGAGGCAAACACACTATGAATGGAGTACCCAGAGAGCCCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS TCA 72 bp | ACCCACCACATGACAGATCACCACCTTCTCCTGGGTTaGCTTGACTACACTGGATACCTTCTCAACTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: THHMTDHHLLLG*LDYTGYLLNCQ Trigger: CTGACAGTTGAGAAGGTATCCAGTGTAGTCAAGTCAACCCAGGAGAAGGTGGTGATCTGTCATGTGGTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170757.3 |
||
| CDS TCA 72 bp | CAGCATGAGGGCAGCATTGTGGTCCTTGGAGATCCCTaGAATTATGATGGTGCTTTTCTTCCGTGGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: QHEGSIVVLGDP*NYDGAFLPWGL Trigger: AAGTCCCCACGGAAGAAAAGCACCATCATAATTTCAGGGATCTCCAAGGACCACAATGCTGCCCTCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231575.2 |
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| CDS CAA 72 bp | TCCAGTTCCCAGGAATCTAGATCATTTTCTCTAGGCTaGAGGGCAGGTAGGGTCTGGGCTGGCTCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSQESRSFSLG*RAGRVWAGSFS Trigger: AGAAAATGAGCCAGCCCAGACCCTACCTGCCCTCAAGCCTAGAGAAAATGATCTAGATTCCTGGGAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000231575.2 |
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| CDS TCA 72 bp | GGCCTGAAGCACCAGGGTGGTTTATCAGGGAAACTCTaGTATTCTTCACCTGCAATTTTAGTTCATGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GLKHQGGLSGKL*YSSPAILVHEP Trigger: GGGCTCATGAACTAAAATTGCAGGTGAAGAATATCAGAGTTTCCCTGATAAACCACCCTGGTGCTTCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000232165.2 |
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| CDS GCA 72 bp | CTCAGAAAAACAGATGGAGAGGCAGCATTAACTAGGTaGTTGAAAAGATCCTCAAGGGCTTCAGAAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: LRKTDGEAALTR*LKRSSRASESM Trigger: CATGCTTTCTGAAGCCCTTGAGGATCTTTTCAAGCACCTAGTTAATGCTGCCTCTCCATCTGTTTTTCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170757.3 ENSMUST00000232165.2 |
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