Pregenerated sensors for C1S2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079343Ensembl transcript IDs: ENSMUST00000068797.3, ENSMUST00000218020.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCCTTCGTGGCTCTCCATACAACCAGAACCAGGTTGGAAGCATaGTTTGCTGCAAGTTATTCAGGAATTTCAAGCAGGTTAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: LSFVALHTTRTRLEA*FAASYSGISSRLNE Trigger: CTCATTTAACCTGCTTGAAATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGTATGGAGAGCCACGAAGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR TCA 90 bp | AACCAACACAGCTCAGTGATCAACTCTGCCTCCATGCAGACTTTTTaGCAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: NQHSSVINSASMQTF*QSSSALTILPHLLS Trigger: GGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATCACTGAGCTGTGTTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR CAA 90 bp | TCTCCCTCTCTCTCCTTCGTGGCTCTCCATACAACCAGAACCAGGTaGGAAGCATGCTTTGCTGCAAGTTATTCAGGAATTTCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSLSFVALHTTRTR*EACFAASYSGISSR Trigger: CCTGCTTGAAATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGTATGGAGAGCCACGAAGGAGAGAGAGGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGGGAAGCATGCTTTGCTaGAAGTTATTCAGGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWGSMLC*KLFRNF Trigger: GAAATTCCTGAATAACTTGCAGCAAAGCATGCTTCC...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATCCTCTCTCTCCTTCGTaGCTCTCCATACAACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: CILLEMQSSMLLMPEFHDPLSPS*LSIQPE Trigger: TTCTGGTTGTATGGAGAGCCACGAAGGAGAGAGAGG...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTTTCTCTCCATTGTTGTaGAATAAGGGGACCACCATA | + |
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Preference number: 2 (lower is better) Translates to: REDRIRYPCGIAQDRRVSFSPLL*NKGTTI Trigger: TATGGTGGTCCCCTTATTTCACAACAATGGAGAGAA...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGACCAGGTTGGAAGCATaGTTTGCTGCAAGTTATTCA | + |
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Preference number: 2 (lower is better) Translates to: KKAVFPVCILLEMQSSMLTRLEA*FAASYS Trigger: TGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGT...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTTAAATGAGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATTCTCTCCATTGTTGTaGAATAAGGGGACCACCATA | + |
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Preference number: 2 (lower is better) Translates to: SRLNEGRSDKISLWNSARFSPLL*NKGTTI Trigger: TATGGTGGTCCCCTTATTTCACAACAATGGAGAGAA...TCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCTCATTTAACCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGTTAGCAATAGTAACTaGATAACCAACACAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: REDRIRYPCGIAQDRRVSVSNSN*ITNTAQ Trigger: CTGAGCTGTGTTGGTTATTCAGTTACTATTGCTAAC...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGGTTGGAAGCATGCTTTaGTGCAAGTTATTCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: KKAVFPVCILLEMQSSMLVGSML*CKLFRN Trigger: ATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAAC...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATACCAGGTTGGAAGCATaGTTTGCTGCAAGTTATTCA | + |
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Preference number: 2 (lower is better) Translates to: CILLEMQSSMLLMPEFHDTRLEA*FAASYS Trigger: TGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGT...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATGTTAGCAATAGTAACTaGATAACCAACACAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CILLEMQSSMLLMPEFHDVSNSN*ITNTAQ Trigger: CTGAGCTGTGTTGGTTATTCAGTTACTATTGCTAAC...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATTCAACTCTGCCTCCATaGAGACTTTTTGACAATCAA | + |
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Preference number: 2 (lower is better) Translates to: CILLEMQSSMLLMPEFHDSTLPP*RLFDNQ Trigger: TTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGA...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGCTGAGAACAGTGAGCTaGCTATGCCCTGGAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWLRTVS*LCPGGE Trigger: CTCCCCTCCAGGGCATAGCAAGCTCACTGTTCTCAG...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR CCA 72 bp | GATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTaGCTCTCCATACAACCAGAACCAGGTTGGAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: DAMPPNLPLSPS*LSIQPEPGWKH Trigger: ATGCTTCCAACCTGGTTCTGGTTGTATGGAGAGCCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTCTGAGAACAGTGAGCTaGCTATGCCCTGGAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: REDRIRYPCGIAQDRRVSLRTVS*LCPGGE Trigger: CTCCCCTCCAGGGCATAGCAAGCTCACTGTTCTCAG...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR GCA 72 bp | GTGGCTCTCCATACAACCAGAACCAGGTTGGAAGCATaGTTTGCTGCAAGTTATTCAGGAATTTCAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VALHTTRTRLEA*FAASYSGISSR Trigger: CCTGCTTGAAATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGTATGGAGAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATACAACCAGAACCAGGTaGGAAGCATGCTTTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CILLEMQSSMLLMPEFHDTTRTR*EACFAA Trigger: TGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGT...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR CCA 72 bp | TCTCCTTCGTGGCTCTCCATACAACCAGAACCAGGTTaGAAGCATGCTTTGCTGCAAGTTATTCAGGAATTT | + |
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Preference number: 3 (lower is better) Translates to: SPSWLSIQPEPG*KHALLQVIQEF Trigger: AAATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGTATGGAGAGCCACGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTCTCCATGCAGACTTTTaGACAATCAAGTTCAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: REDRIRYPCGIAQDRRVSLHADF*TIKFSI Trigger: AATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAG...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR TCA 72 bp | AGCTCAGTGATCAACTCTGCCTCCATGCAGACTTTTTaGCAATCAAGTTCAGCATTAACCATACTCCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SSVINSASMQTF*QSSSALTILPH Trigger: ATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATCACTGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR GCA 72 bp | TCTCCATACAACCAGAACCAGGTTGGAAGCATGCTTTaGTGCAAGTTATTCAGGAATTTCAAGCAGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SPYNQNQVGSML*CKLFRNFKQVK Trigger: TTTAACCTGCTTGAAATTCCTGAATAACTTGCAGCAAAGCATGCTTCCAACCTGGTTCTGGTTGTATGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATCTCCATGCAGACTTTTaGACAATCAAGTTCAGCATT | + |
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Preference number: 3 (lower is better) Translates to: CILLEMQSSMLLMPEFHDLHADF*TIKFSI Trigger: AATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAG...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | AGCAGGTTAAATGAGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATGTTCTGCCCCACCCTaGGATCAGCCCCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SRLNEGRSDKISLWNSARCSAPP*DQPHVT Trigger: GGTGACATGGGGCTGATCTCAGGGTGGGGCAGAACA...TCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCTCATTTAACCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCACCAGCTGTGGGGTaGTTAAAGAAGACTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSPPAVG*LKKTCQ Trigger: CTGGCAAGTCTTCTTTAATCACCCCACAGCTGGTGG...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGGACAGGATCTCCCCATaGATGGTGGGCTCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KKAVFPVCILLEMQSSMLDRISP*MVGSAE Trigger: TTCTGCTGAGCCCACCATGCATGGGGAGATCCTGTC...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGATGGAGGAAGTATTCTaGGGGACAGGAGCAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWMEEVF*GTGAEV Trigger: TACTTCTGCTCCTGTCCCCCAGAATACTTCCTCCAT...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTGCCTGGTAGGCAGATaGGGGAAAACTTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KKAVFPVCILLEMQSSMLCLVGR*GKTWVP Trigger: TGGGACCCAAGTTTTCCCCCATCTGCCTACCAGGCA...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTTGCCTGGTAGGCAGATaGGGGAAAACTTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSCLVGR*GKTWVP Trigger: TGGGACCCAAGTTTTCCCCCATCTGCCTACCAGGCA...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATTGTTCTGCCCCACCCTaGGATCAGCCCCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHCSAPP*DQPHVT Trigger: GGTGACATGGGGCTGATCTCAGGGTGGGGCAGAACA...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGTTAAATGAGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGAAGTTGGGGCTCTTGCTaGTCCTCTGACCACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SRLNEGRSDKISLWNSARSWGSC*SSDHRV Trigger: GACTCTGTGGTCAGAGGACCAGCAAGAGCCCCAACT...TCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCTCATTTAACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATTTTTTCTCCACAACGTaGGCGGCCGTCAGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHFFSTT*AAVSTQ Trigger: CTGGGTGCTGACGGCCGCTCACGTTGTGGAGAAAAA...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGGTTACCGGTACCTTTaGCCCTCTGAGGTTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSGYRYL*PSEVDN Trigger: GTTATCAACCTCAGAGGGGCAAAGGTACCGGTAACC...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTACAGGGTCTTTCAGCTaGACCAGGGCAATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSTGSFS*TRAMSL Trigger: CAATGACATTGCCCTGGTCCAGCTGAAAGACCCTGT...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGATAACATAGTCCTCTaGCCTTGCTGTGGGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSDNIVL*PCCGVL Trigger: GAGAACCCCACAGCAAGGCCAGAGGACTATGTTATC...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTAAGCCCTCCTGCAGTTaGATCTGGTATTCACACCTT | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSKPSCS*IWYSHL Trigger: AAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTT...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | CAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACTGACAGGATCTCCCCATaGATGGTGGGCTCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QLCLHADFLTIKFSINHTDRISP*MVGSAE Trigger: TTCTGCTGAGCCCACCATGCATGGGGAGATCCTGTC...AGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTTCAAAATCTTCTCTCTaGATCGTCACCACCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSSKSSL*IVTTTW Trigger: CCAAGTGGTGGTGACGATGCAGAGAGAAGATTTTGA...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGCCATGTTGTTAGTCTCTTTTCTGTTCTaGCCCACCCTGAGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLVSFLF*PTLRSA Trigger: GGCTGATCTCAGGGTGGGGCAGAACAGAAAAGAGAC...TAACAACATGGCAGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATAGTTGGGGCTCTTGCTaGTCCTCTGACCACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHSWGSC*SSDHRV Trigger: GACTCTGTGGTCAGAGGACCAGCAAGAGCCCCAACT...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR TCA 90 bp | CAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACTCCACCAGCTGTGGGGTaGTTAAAGAAGACTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QLCLHADFLTIKFSINHTPPAVG*LKKTCQ Trigger: CTGGCAAGTCTTCTTTAATCACCCCACAGCTGGTGG...AGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTTCAAAATCTTCTCTCTaGATCGTCACCACCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSSKSSL*IVTTTW Trigger: CCAAGTGGTGGTGACGATGCAGAGAGAAGATTTTGA...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGTTCCATGTAGTAATATaGCTCTTCACACGTATAGTG | + |
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Preference number: 4 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWFHVVI*LFTRIV Trigger: CACTATACGTGTGAAGAGCCATATTACTACATGGAA...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATACAGGGTCTTTCAGCTaGACCAGGGCAATGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CILLEMQSSMLLMPEFHDTGSFS*TRAMSL Trigger: CAATGACATTGCCCTGGTCCAGCTGAAAGACCCTGT...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGAGCTACATAGAATTTTaGGGCCTTGACATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKAVFPVCILLEMQSSMLSYIEF*GLDIGD Trigger: GTCCCCAATGTCAAGGCCCCAAAATTCTATGTAGCT...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR GCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATGGTTACCGGTACCTTTaGCCCTCTGAGGTTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHGYRYL*PSEVDN Trigger: GTTATCAACCTCAGAGGGGCAAAGGTACCGGTAACC...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATGATAACATAGTCCTCTaGCCTTGCTGTGGGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHDNIVL*PCCGVL Trigger: GAGAACCCCACAGCAAGGCCAGAGGACTATGTTATC...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR TCA 90 bp | CAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACTAAGCCCTCCTGCAGTTaGATCTGGTATTCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLCLHADFLTIKFSINHTKPSCS*IWYSHL Trigger: AAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTT...AGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATTTCCTCATGTCATCATaGAGGAAGTATTCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHFLMSS*RKYSGG Trigger: TCCCCCAGAATACTTCCTCCATGATGACATGAGGAA...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTTTCCATGTAGTAATATaGCTCTTCACACGTATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSFHVVI*LFTRIV Trigger: CACTATACGTGTGAAGAGCCATATTACTACATGGAA...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTTAAATGAGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGACTGAGGTTGATAACATaGAGTCTCTTTTCTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLNEGRSDKISLWNSARLRLIT*SLFSVL Trigger: CAGAACAGAAAAGAGACTCCATGTTATCAACCTCAG...TCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCTCATTTAACCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATAGCTACATAGAATTTTaGGGCCTTGACATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHSYIEF*GLDIGD Trigger: GTCCCCAATGTCAAGGCCCCAAAATTCTATGTAGCT...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATATTCGTTTACGTCTATaGCAGTGTAGTATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CILLEMQSSMLLMPEFHDIRLRL*QCSMLQ Trigger: TTGCAGCATACTACACTGCCATAGACGTAAACGAAT...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGCCATGTTGTTACTTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLLLSPV*RFLKRL Trigger: TAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAG...TAACAACATGGCAGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATATTCGTTTACGTCTATaGCAGTGTAGTATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHIRLRL*QCSMLQ Trigger: TTGCAGCATACTACACTGCCATAGACGTAAACGAAT...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CCA 90 bp | CAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACTCTGAGGTTGATAACATaGAGTCTCTTTTCTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLCLHADFLTIKFSINHTLRLIT*SLFSVL Trigger: CAGAACAGAAAAGAGACTCCATGTTATCAACCTCAG...AGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR GCA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATCTTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DQLCLHADFLTIKFSINHLLSPV*RFLKRL Trigger: TAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAG...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS TCA 90 bp | GTGATCCCGGCATACATTGAAGGGTCGGAGTTTTTCTCCACAACGTaGGCGGCCGTCAGCACCCAGTACTCATTAATAAGAGCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VIPAYIEGSEFFSTT*AAVSTQYSLIRAPP Trigger: TGGTGGGGCTCTTATTAATGAGTACTGGGTGCTGACGGCCGCTCACGTTGTGGAGAAAAACTCCGACCCTTCAATGTATGCCGGGATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 90 bp | ATTTTCCAAGTCAGCCAGTCTCAAAGCCGTGATCCCGGCATACATTaGAGGGTCGGAGTTTTTCTCCACAACGTGAGCGGCCGTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IFQVSQSQSRDPGIH*RVGVFLHNVSGRQH Trigger: GTGCTGACGGCCGCTCACGTTGTGGAGAAAAACTCCGACCCTTCAATGTATGCCGGGATCACGGCTTTGAGACTGGCTGACTTGGAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 90 bp | TCTTCTCTCTGCATCGTCACCACCACTTGGAAGCCCTCCTGCAGTTaGATCTGGTATTCACACCTTGAGTTCTCCGGGTATGGATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLCIVTTTWKPSCS*IWYSHLEFSGYGLG Trigger: TCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTCCAAGTGGTGGTGACGATGCAGAGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS TCA 90 bp | TGTAGAGCCTCTGGGCATTTTCCAAGTCAGCCAGTCTCAAAGCCGTaGTCCCGGCATACATTGAAGGGTCGGAGTTTTTCTCCACAACGT | + |
|
Preference number: 5 (lower is better) Translates to: CRASGHFPSQPVSKP*SRHTLKGRSFSPQR Trigger: ACGTTGTGGAGAAAAACTCCGACCCTTCAATGTATGCCGGGATCACGGCTTTGAGACTGGCTGACTTGGAAAATGCCCAGAGGCTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGTGGGATAATTGGGACTaGAGATCTCCCCAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWWDNWD*RSPQSG Trigger: CCCTGATTGGGGAGATCTCAAGTCCCAATTATCCCA...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGCATCGTCACCACCACTaGGAAGCCCTCCTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KKAVFPVCILLEMQSSMLHRHHH*EALLQL Trigger: CAACTGCAGGAGGGCTTCCAAGTGGTGGTGACGATG...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTCATCGTCACCACCACTaGGAAGCCCTCCTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: REDRIRYPCGIAQDRRVSHRHHH*EALLQL Trigger: CAACTGCAGGAGGGCTTCCAAGTGGTGGTGACGATG...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 90 bp | CAGGTTGTCCTCCGAATATCTTCTGCTGCACTTGAAAGGGCTCGGTaGGTACTCCACAGACTGGAATACATCTTGGAAGCTCAATACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVVLRISSAALERAR*VLHRLEYILEAQYP Trigger: TGGGTATTGAGCTTCCAAGATGTATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAGCAGAAGATATTCGGAGGACAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWTRAMS*SKFVRG Trigger: CCCACGGACAAATTTTGACAATGACATTGCCCTGGT...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 90 bp | TATCTTCTGCTGCACTTGAAAGGGCTCGGTGGGTACTCCACAGACTaGAATACATCTTGGAAGCTCAATACCCAGCTGGTCATTTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLLLHLKGLGGYSTD*NTSWKLNTQLVIYP Trigger: TGGGTAAATGACCAGCTGGGTATTGAGCTTCCAAGATGTATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAGCAGAAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCCTTCGTGGTTTGCCCCTCTGAGGTaGATAACATGGAGTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MPEFHDAMPPNLPLSPSWFAPLR*ITWSLF Trigger: AAAGAGACTCCATGTTATCAACCTCAGAGGGGCAAA...CCACGAAGGAGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 90 bp | ACCGGAGTTGCTCCACTGTCCATCGCTTTGACAAGTGGAATAGTATaGAGTAGAGCTAACATGTCCCTCCACAACTTCAAATCCGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGVAPLSIALTSGIV*SRANMSLHNFKSVH Trigger: GTGGACGGATTTGAAGTTGTGGAGGGACATGTTAGCTCTACTTCATACTATTCCACTTGTCAAAGCGATGGACAGTGGAGCAACTCCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTTGGGATAATTGGGACTaGAGATCTCCCCAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: REDRIRYPCGIAQDRRVSWDNWD*RSPQSG Trigger: CCCTGATTGGGGAGATCTCAAGTCCCAATTATCCCA...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGGAAGCCCTCCTGCAGTaGAATCTGGTATTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: KKAVFPVCILLEMQSSMLEALLQ*NLVFTP Trigger: AGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTC...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 90 bp | TTTTCAATCTTTGCAGGTTGTCCTCCGAATATCTTCTGCTGCACTTaGAAGGGCTCGGTGGGTACTCCACAGACTGGAATACATCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSIFAGCPPNIFCCT*KGSVGTPQTGIHLG Trigger: TCCAAGATGTATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAGCAGAAGATATTCGGAGGACAACCTGCAAAGATTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTACATCTCCACTACAGTaGACTCCACAATTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSTSPLQ*TPQFLM Trigger: CATGAGGAATTGTGGAGTCAACTGTAGTGGAGATGT...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTCTGGTATTCACACCTaGAGTTCTCCGGGTATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KKAVFPVCILLEMQSSMLSGIHT*SSPGMD Trigger: ATCCATACCCGGAGAACTCAAGGTGTGAATACCAGA...CAGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTCATAATTCTTTACCTTaGTGTAGACCCCATAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSHNSLP*CRPHRP Trigger: GGGCCTATGGGGTCTACACAAAGGTAAAGAATTATG...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATCCACCAATGAAGTTATaGCAGAAGTGGCTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CILLEMQSSMLLMPEFHDPPMKL*QKWLQG Trigger: CCCCTGTAGCCACTTCTGCAATAACTTCATTGGTGG...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGTTAAATGAGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGAGGCTCCCAATTAGAATaGGCAGTGCTTTCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRLNEGRSDKISLWNSARGSQLE*AVLSLG Trigger: TCCTAAAGAAAGCACTGCCAATTCTAATTGGGAGCC...TCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCTCATTTAACCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTTCTTCTTTCACCTGTTaGCAGGTTTCTAAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSSSFTC*QVSKEV Trigger: AACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAGA...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS TCA 90 bp | GTAGTATGCTGCAAAGCCGGTAAACTGTTCTTCGATGGAGAAGTCTaGGGTAAAGACCACCTGAAGTTTATTGTATGGGAACTGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVCCKAGKLFFDGEV*GKDHLKFIVWELKL Trigger: GAGTTTCAGTTCCCATACAATAAACTTCAGGTGGTCTTTACCTCAGACTTCTCCATCGAAGAACAGTTTACCGGCTTTGCAGCATACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS GCA 90 bp | TCCGTCCACACAGGTTATCTTCACCACATCTTTAAACACGTATTTTaGCTTATCGGGCTCCCAATTAGAATTGGCAGTGCTTTCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVHTGYLHHIFKHVF*LIGLPIRIGSAFFR Trigger: CCTAAAGAAAGCACTGCCAATTCTAATTGGGAGCCCGATAAGGCAAAATACGTGTTTAAAGATGTGGTGAAGATAACCTGTGTGGACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATTCTGGTATTCACACCTaGAGTTCTCCGGGTATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DQLCLHADFLTIKFSINHSGIHT*SSPGMD Trigger: ATCCATACCCGGAGAACTCAAGGTGTGAATACCAGA...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTGATGCCTGAATTCCATGATGCTATGCCCCCAAATCTCCCTCTCTCTGAAAATTTTCAATCTTaGCAGGTTGTCCTCCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: MLLMPEFHDAMPPNLPLSENFQS*QVVLRI Trigger: TATTCGGAGGACAACCTGCAAAGATTGAAAATTTTC...AGAGAGAGGGAGATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTTGATGCCTGAATTCCATGATCATAATTCTTTACCTTaGTGTAGACCCCATAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CILLEMQSSMLLMPEFHDHNSLP*CRPHRP Trigger: GGGCCTATGGGGTCTACACAAAGGTAAAGAATTATG...ATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACATCTCCACTACAGTaGACTCCACAATTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DQLCLHADFLTIKFSINHTSPLQ*TPQFLM Trigger: CATGAGGAATTGTGGAGTCAACTGTAGTGGAGATGT...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | GATCAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATGGCTCCCAATTAGAATaGGCAGTGCTTTCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQLCLHADFLTIKFSINHGSQLE*AVLSLG Trigger: TCCTAAAGAAAGCACTGCCAATTCTAATTGGGAGCC...ATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGAAAATTTTCAATCTTaGCAGGTTGTCCTCCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: REDRIRYPCGIAQDRRVSENFQS*QVVLRI Trigger: TATTCGGAGGACAACCTGCAAAGATTGAAAATTTTC...AGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
||
| CDS-3UTR CAA 90 bp | CAACTCTGCCTCCATGCAGACTTTTTGACAATCAAGTTCAGCATTAACCATACTTTTGCCCCTCTGAGGTaGATAACATGGAGTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QLCLHADFLTIKFSINHTFAPLR*ITWSLF Trigger: AAAGAGACTCCATGTTATCAACCTCAGAGGGGCAAA...AGTATGGTTAATGCTGAACTTGATTGTCAAAAAGTCTGCATGGAGGCAGAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS-3UTR CAA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTCTCTGCCATGTTGTTATCTTCTTTCACCTGTTaGCAGGTTTCTAAAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLSSFTC*QVSKEV Trigger: AACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAGA...TAACAACATGGCAGAGACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS GCA 72 bp | TGCTGGTCCTCTGACCACAGAGTCTCCCTTCCTCGATaGCTCCTGAGATTATCTGCACTGAGTCGTATGCAC | + |
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Preference number: 6 (lower is better) Translates to: CWSSDHRVSLPR*LLRLSALSRMH Trigger: GTGCATACGACTCAGTGCAGATAATCTCAGGAGGCATCGAGGAAGGGAGACTCTGTGGTCAGAGGACCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 72 bp | CTGCACTTGAAAGGGCTCGGTGGGTACTCCACAGACTaGAATACATCTTGGAAGCTCAATACCCAGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LHLKGLGGYSTD*NTSWKLNTQLV Trigger: GACCAGCTGGGTATTGAGCTTCCAAGATGTATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 72 bp | TGCATCGTCACCACCACTTGGAAGCCCTCCTGCAGTTaGATCTGGTATTCACACCTTGAGTTCTCCGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: CIVTTTWKPSCS*IWYSHLEFSGY Trigger: ATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTCCAAGTGGTGGTGACGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS GCA 72 bp | CTGGCCTTGCTGTGGGGTTCTCTTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTACCGGTACCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LALLWGSLLSPV*RFLKRLPVPLP Trigger: GGGCAAAGGTACCGGTAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAGAGAACCCCACAGCAAGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | CTTTGCAGGTTGTCCTCCGAATATCTTCTGCTGCACTaGAAAGGGCTCGGTGGGTACTCCACAGACTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LCRLSSEYLLLH*KGLGGYSTDWN Trigger: ATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAGCAGAAGATATTCGGAGGACAACCTGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 90 bp | TCACAGGGTCTTTCAGCTGGACCAGGGCAATGTCATTGTCAAAATTaGTCCGTGGGTTTAGGTCATCGTCTTCCTTCCAGCCGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: SQGLSAGPGQCHCQN*SVGLGHRLPSSRDE Trigger: TTCATCCCGGCTGGAAGGAAGACGATGACCTAAACCCACGGACAAATTTTGACAATGACATTGCCCTGGTCCAGCTGAAAGACCCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 72 bp | TCTGGGCATTTTCCAAGTCAGCCAGTCTCAAAGCCGTaGTCCCGGCATACATTGAAGGGTCGGAGTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGHFPSQPVSKP*SRHTLKGRSFS Trigger: AGAAAAACTCCGACCCTTCAATGTATGCCGGGATCACGGCTTTGAGACTGGCTGACTTGGAAAATGCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | GGAAGCCCTCCTGCAGTTGAATCTGGTATTCACACCTaGAGTTCTCCGGGTATGGATTGGGATAATTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSPPAVESGIHT*SSPGMDWDNWD Trigger: GTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | TCTGGCCTTGCTGTGGGGTTCTCTTCTTTCACCTGTTaGCAGGTTTCTAAAGAGGTTACCGGTACCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGLAVGFSSFTC*QVSKEVTGTFA Trigger: GGCAAAGGTACCGGTAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAAGAGAACCCCACAGCAAGGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 90 bp | CCACCACTTGGAAGCCCTCCTGCAGTTGAATCTGGTATTCACACCTaGAGTTCTCCGGGTATGGATTGGGATAATTGGGACTTGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: PPLGSPPAVESGIHT*SSPGMDWDNWDLRS Trigger: AGATCTCAAGTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTCCAAGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 90 bp | GGTCCCATTTTCACAGGGTCTTTCAGCTGGACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGGGTTTAGGTCATCGTCTTCCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPIFTGSFSWTRAMS*SKFVRGFRSSSSFQ Trigger: CTGGAAGGAAGACGATGACCTAAACCCACGGACAAATTTTGACAATGACATTGCCCTGGTCCAGCTGAAAGACCCTGTGAAAATGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 72 bp | GAAGCCCTCCTGCAGTTGAATCTGGTATTCACACCTTaGGTTCTCCGGGTATGGATTGGGATAATTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: EALLQLNLVFTP*VLRVWIGIIGT Trigger: AGTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAACTGCAGGAGGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS TCA 72 bp | GCATACATTGAAGGGTCGGAGTTTTTCTCCACAACGTaGGCGGCCGTCAGCACCCAGTACTCATTAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: AYIEGSEFFSTT*AAVSTQYSLIR Trigger: TCTTATTAATGAGTACTGGGTGCTGACGGCCGCTCACGTTGTGGAGAAAAACTCCGACCCTTCAATGTATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 72 bp | TCTGGTATTCACACCTTGAGTTCTCCGGGTATGGATTaGGATAATTGGGACTTGAGATCTCCCCAATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGIHTLSSPGMD*DNWDLRSPQSG Trigger: CCCTGATTGGGGAGATCTCAAGTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | GCTCAATACCCAGCTGGTCATTTACCCATCTCCCATTaGCAGCACATCGATACTCCCCACCTTCTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: AQYPAGHLPISH*QHIDTPHLLHV Trigger: AACATGAAGAAGGTGGGGAGTATCGATGTGCTGCAAATGGGAGATGGGTAAATGACCAGCTGGGTATTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | CTTTCAGCTGGACCAGGGCAATGTCATTGTCAAAATTaGTCCGTGGGTTTAGGTCATCGTCTTCCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSAGPGQCHCQN*SVGLGHRLPSS Trigger: GCTGGAAGGAAGACGATGACCTAAACCCACGGACAAATTTTGACAATGACATTGCCCTGGTCCAGCTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 90 bp | ATTTTCAATCTTTGCAGGTTGTCCTCCGAATATCTTCTGCTGCACTaGAAAGGGCTCGGTGGGTACTCCACAGACTGGAATACATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: IFNLCRLSSEYLLLH*KGLGGYSTDWNTSW Trigger: CCAAGATGTATTCCAGTCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCAGCAGAAGATATTCGGAGGACAACCTGCAAAGATTGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS GCA 72 bp | GATCATGTTGTCAGTGATAACATAGTCCTCTGGCCTTaGTGTGGGGTTCTCTTCTTTCACCTGTTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DHVVSDNIVLWP*CGVLFFHLFAG Trigger: ACCTGCAAACAGGTGAAAGAAGAGAACCCCACAGCAAGGCCAGAGGACTATGTTATCACTGACAACATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | CACATCAAAATCTTCTCTCTGCATCGTCACCACCACTaGGAAGCCCTCCTGCAGTTGAATCTGGTATTCACA | + |
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Preference number: 6 (lower is better) Translates to: HIKIFSLHRHHH*EALLQLNLVFT Trigger: TGTGAATACCAGATTCAACTGCAGGAGGGCTTCCAAGTGGTGGTGACGATGCAGAGAGAAGATTTTGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 72 bp | TTCACAGGGTCTTTCAGCTGGACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGGGTTTAGGTCATCGTCT | + |
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Preference number: 6 (lower is better) Translates to: FTGSFSWTRAMS*SKFVRGFRSSS Trigger: AGACGATGACCTAAACCCACGGACAAATTTTGACAATGACATTGCCCTGGTCCAGCTGAAAGACCCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CAA 90 bp | GTGATTAAAGAAGACTTGCCAGGGAAAATTTTCAATCTTTGCAGGTaGTCCTCCGAATATCTTCTGCTGCACTTGAAAGGGCTCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VIKEDLPGKIFNLCR*SSEYLLLHLKGLGG Trigger: CCCACCGAGCCCTTTCAAGTGCAGCAGAAGATATTCGGAGGACAACCTGCAAAGATTGAAAATTTTCCCTGGCAAGTCTTCTTTAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 72 bp | CACATGGGTAAAGTAAAGGTGAATCCCAAACCCCTCTaGGACTTCAATGTCCCAAGATTTCACGACGTCATT | + |
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Preference number: 6 (lower is better) Translates to: HMGKVKVNPKPL*DFNVPRFHDVI Trigger: AATGACGTCGTGAAATCTTGGGACATTGAAGTCCCAGAGGGGTTTGGGATTCACCTTTACTTTACCCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS CCA 72 bp | AGCACAGATCATGTTGTCAGTGATAACATAGTCCTCTaGCCTTGCTGTGGGGTTCTCTTCTTTCACCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: STDHVVSDNIVL*PCCGVLFFHLF Trigger: AAACAGGTGAAAGAAGAGAACCCCACAGCAAGGCCAGAGGACTATGTTATCACTGACAACATGATCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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| CDS GCA 72 bp | ACAGGTTATCTTCACCACATCTTTAAACACGTATTTTaGCTTATCGGGCTCCCAATTAGAATTGGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TGYLHHIFKHVF*LIGLPIRIGSA Trigger: AGCACTGCCAATTCTAATTGGGAGCCCGATAAGGCAAAATACGTGTTTAAAGATGTGGTGAAGATAACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068797.3 ENSMUST00000218020.2 |
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