Pregenerated sensors for C1S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038521Ensembl transcript IDs: ENSMUST00000159463.8, ENSMUST00000160505.8, ENSMUST00000162443.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCAACACGGCTCAGTGATCAACCCTGCCTCCATGCAGACTCTTTaGCAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: NQHGSVINPASMQTL*QSSSALTILPHLLS Trigger: GGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACTGAGCCGTGTTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR GCA 90 bp | TCTCCCTTCGTGGCTCTCCATACAGCCAGAACCAGGTTGGAAGCATaGTTTGCTGTAAATTATTCAGGAATTTCAAGCAGGTTAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: SPFVALHTARTRLEA*FAVNYSGISSRLNE Trigger: CTCATTTAACCTGCTTGAAATTCCTGAATAATTTACAGCAAAGCATGCTTCCAACCTGGTTCTGGCTGTATGGAGAGCCACGAAGGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAGTTGGAAGCATGCTTTaGTGTAAATTATTCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: MLCPQISLSPFVALHTARVGSML*CKLFRN Trigger: ATTCCTGAATAATTTACAGCAAAGCATGCTTCCAAC...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTTCAACCCTGCCTCCATaGAGACTCTTTGACAATCAA | + |
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Preference number: 2 (lower is better) Translates to: REDRIRYPCGIAQDRRVSSTLPP*RLFDNQ Trigger: TTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGA...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTAATTCCATGATGCTATaGCCCCAAATCTCCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSNSMML*PQISLS Trigger: AGAGAGGGAGATTTGGGGGCATAGCATCATGGAATT...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR TCA 72 bp | GGCTCAGTGATCAACCCTGCCTCCATGCAGACTCTTTaGCAATCAAGTTCAGCATTAACCATACTCCCACAT | + |
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Preference number: 3 (lower is better) Translates to: GSVINPASMQTL*QSSSALTILPH Trigger: ATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAACCAGAGGGCAGTTCCCCTCTaGGTCAGCGGGCTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: MPPNLPLSLRGSPYSQNQRAVPL*VSGLHI Trigger: GATGTGGAGCCCGCTGACTCAGAGGGGAACTGCCCT...CTGGTTCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAACCAGCCGCCGCTGTCCCCGTaGCAGCTGTCAACACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: MPPNLPLSLRGSPYSQNQPPLSP*QLSTPF Trigger: GAAAGGTGTTGACAGCTGTCACGGGGACAGCGGCGG...CTGGTTCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR GCA 90 bp | ATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAACCAGGGGAGTTGGGGCTCTTaGTGGTCCTCTGGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: MPPNLPLSLRGSPYSQNQGSWGS*WSSGHR Trigger: TCTGTGGCCAGAGGACCAGCAAGAGCCCCAACTCCC...CTGGTTCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAAGTTGGGGCTCTTGCTaGTCCTCTGGCCACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARSWGSC*SSGHRV Trigger: GACTCTGTGGCCAGAGGACCAGCAAGAGCCCCAACT...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAACCAGGGATCTCCCCATGCATaGTGGGCTCAGCAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: MPPNLPLSLRGSPYSQNQGSPHA*WAQQKM Trigger: CATTTTCTGCTGAGCCCACCATGCATGGGGAGATCC...CTGGTTCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAAAGCCCTCCTGCAGCTaGATCTGGTATTCACACCTT | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARKPSCS*IWYSHL Trigger: AAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTT...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTCCGCCGCTGTCCCCGTaGCAGCTGTCAACACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSPPLSP*QLSTPF Trigger: GAAAGGTGTTGACAGCTGTCACGGGGACAGCGGCGG...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | AGTGATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACTGTACTGCCCCACCCTaGGATCAGCCCCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SDQPCLHADSLTIKFSINCTAPP*DQPHVT Trigger: GGTGACATGGGGCTGATCTCAGGGTGGGGCAGTACA...GTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTTGTACTGCCCCACCCTaGGATCAGCCCCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHACTAPP*DQPHVT Trigger: GGTGACATGGGGCTGATCTCAGGGTGGGGCAGTACA...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR GCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGGGAGTTGGGGCTCTTaGTGGTCCTCTGGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHAGSWGS*WSSGHR Trigger: TCTGTGGCCAGAGGACCAGCAAGAGCCCCAACTCCC...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGATCTCCGGGTATGGATTaGGATAATTGGGACTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARSPGMD*DNWDLR Trigger: TCTCAAGTCCCAATTATCCCAATCCATACCCGGAGA...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAAGAAGTATCCACCAATaGAGTTATTGCAGAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARRSIHQ*SYCRSG Trigger: GCCACTTCTGCAATAACTTCATTGGTGGATACTTCT...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | CAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCCATCGTTGTGAAAAGGGCAGTTCCCCTCTaGGTCAGCGGGCTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: QSSSALTILPHLLSIVVKRAVPL*VSGLHI Trigger: GATGTGGAGCCCGCTGACTCAGAGGGGAACTGCCCT...TTTCACAACGATGGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTAGTTGGGGCTCTTGCTaGTCCTCTGGCCACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTSWGSC*SSGHRV Trigger: GACTCTGTGGCCAGAGGACCAGCAAGAGCCCCAACT...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGATTCCATGTAGTAATATaGCTCTTCACACGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARFHVVI*LFTRVV Trigger: CACTACACGTGTGAAGAGCCATATTACTACATGGAA...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAATTTGTCCGTGTGTTTaGGTCATCTTCTTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARICPCV*VIFFLP Trigger: TGGAAGAAAGAAGATGACCCAAACACACGGACAAAT...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR CAA 72 bp | CGGCTCAGTGATCAACCCTGCCTCCATGCAGACTCTTaGACAATCAAGTTCAGCATTAACCATACTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RLSDQPCLHADS*TIKFSINHTPT Trigger: TGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACTGAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGGGATAATTGGGACTTaGGATCTCCCCAATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHAGIIGT*DLPNQG Trigger: GCCCTGATTGGGGAGATCTCAAGTCCCAATTATCCC...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | CAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCCATCGTTGTGAAATGCCTGGTAGGCAGATaGGGGAGACTTTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSSSALTILPHLLSIVVKCLVGR*GRLWVP Trigger: TGGGACCCAAAGTCTCCCCCATCTGCCTACCAGGCA...TTTCACAACGATGGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTTGCCTGGTAGGCAGATaGGGGAGACTTTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSCLVGR*GRLWVP Trigger: TGGGACCCAAAGTCTCCCCCATCTGCCTACCAGGCA...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTCCTCAGGCCTTACAGTaGGGTTCTCCTCTTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHAPQALQ*GSPLSP Trigger: AGGTGAAAGAGGAGAACCCCACTGTAAGGCCTGAGG...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR GCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTACAGGGTCTTTCAGCTaGACCAGGGCAATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTTGSFS*TRAMSL Trigger: CAATGACATTGCCCTGGTGCAGCTGAAAGACCCTGT...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR GCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTACAGGGTCTTTCAGCTaGACCAGGGCAATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHATGSFS*TRAMSL Trigger: CAATGACATTGCCCTGGTGCAGCTGAAAGACCCTGT...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | GATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATTCTCCCCATGCATGGTaGGCTCAGCAGAAAATGATG | + |
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Preference number: 4 (lower is better) Translates to: DQPCLHADSLTIKFSINHSPHAW*AQQKMM Trigger: CATCATTTTCTGCTGAGCCCACCATGCATGGGGAGA...ATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTGTGGAGGAAGTATTCTaGGGGACAGGAGCAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTVEEVF*GTGAEV Trigger: TACTTCTGCTCCTGTCCCCCAGAATACTTCCTCCAC...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATGCTATGCCCCCAAATCTCCCTCTCTCCCTTCGTGGCTCTCCATACAGCCAGAAAACACACTATTCTCTaGCTCTTCAACTTTACCATT | + |
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Preference number: 4 (lower is better) Translates to: MLCPQISLSPFVALHTARKHTIL*LFNFTI Trigger: AATGGTAAAGTTGAAGAGCCAGAGAATAGTGTGTTT...TCTGGCTGTATGGAGAGCCACGAAGGGAGAGAGGGAGATTTGGGGGCATAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGGGTACTCCACAGGCTaGAATACATCTTGGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSGYSTG*NTSWKL Trigger: GAGCTTCCAAGATGTATTCCAGCCTGTGGAGTACCC...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTAGGGATAATTGGGACTTaGGATCTCCCCAATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLGIIGT*DLPNQG Trigger: GCCCTGATTGGGGAGATCTCAAGTCCCAATTATCCC...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | GATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATCTGGTATTCACACCTTaGGTTCTCCGGGTATGGATT | + |
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Preference number: 4 (lower is better) Translates to: DQPCLHADSLTIKFSINHLVFTP*VLRVWI Trigger: AATCCATACCCGGAGAACTCAAGGTGTGAATACCAG...ATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | CATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTATTTTCTCCAAAACGTaGGCAGCCGTCAGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: HADSLTIKFSINHTPTSSIFSKT*AAVSTQ Trigger: CTGGGTGCTGACGGCTGCTCACGTTTTGGAGAAAAT...AGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGGTTACTGGTACCTTTaGCCCTCTGAGGTTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSGYWYL*PSEVDN Trigger: GTTATCAACCTCAGAGGGGCAAAGGTACCAGTAACC...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTAGGATCTCCCCATGCATaGTGGGCTCAGCAGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLGSPHA*WAQQKM Trigger: CATTTTCTGCTGAGCCCACCATGCATGGGGAGATCC...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTAATCCCAAACCCCTCTaGGACTTCAATGTCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSNPKPL*DFNVPR Trigger: TCTTGGGACATTGAAGTCCCAGAGGGGTTTGGGATT...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | GATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATAATCCCAAACCCCTCTaGGACTTCAATGTCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: DQPCLHADSLTIKFSINHNPKPL*DFNVPR Trigger: TCTTGGGACATTGAAGTCCCAGAGGGGTTTGGGATT...ATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTACCTCAGGCCTTACAGTaGGGTTCTCCTCTTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLPQALQ*GSPLSP Trigger: AGGTGAAAGAGGAGAACCCCACTGTAAGGCCTGAGG...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| 3UTR CAA 72 bp | GTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTGTaGATGCCTGAATTCCATGATGCTATGCCCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VCILLEMQSSML*MPEFHDAMPPN Trigger: ATTTGGGGGCATAGCATCATGGAATTCAGGCATCAACAGCATGGAACTCTGCATCTCTAACAAGATGCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR TCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTAAAGCCCTCCTGCAGCTaGATCTGGTATTCACACCTT | + |
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Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLKPSCS*IWYSHL Trigger: AAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTT...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS-3UTR CCA 90 bp | CATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTGTGGAGGAAGTATTCTaGGGGACAGGAGCAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HADSLTIKFSINHTPTSSVEEVF*GTGAEV Trigger: TACTTCTGCTCCTGTCCCCCAGAATACTTCCTCCAC...AGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTTCTCCGGGTATGGATTaGGATAATTGGGACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTSPGMD*DNWDLR Trigger: TCTCAAGTCCCAATTATCCCAATCCATACCCGGAGA...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACTTTTGGCACAGGAGATaGGATCTCCATGGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQPCLHADSLTIKFSINFWHRR*DLHGNE Trigger: TTCGTTACCATGGAGATCCCATCTCCTGTGCCAAAA...GTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTGGGTACTCCACAGGCTaGAATACATCTTGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSGYSTG*NTSWKL Trigger: GAGCTTCCAAGATGTATTCCAGCCTGTGGAGTACCC...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTAGATGGGGGAGACTTTaGGTCCCATTTTCACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HADSLTIKFSINHTPTSSRWGRL*VPFSQG Trigger: ACCCTGTGAAAATGGGACCCAAAGTCTCCCCCATCT...AGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTAGATGGGGGAGACTTTaGGTCCCATTTTCACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSRWGRL*VPFSQG Trigger: ACCCTGTGAAAATGGGACCCAAAGTCTCCCCCATCT...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTAGAAGTATCCACCAATaGAGTTATTGCAGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKGCVPCLHLVRDAEFHARSIHQ*SYCRSG Trigger: GCCACTTCTGCAATAACTTCATTGGTGGATACTTCT...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTAAGTTATTGCAGAAGTaGCTACAGGGGACATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTKLLQK*LQGTSV Trigger: TACAGATGTCCCCTGTAGCCACTTCTGCAATAACTT...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTATGGATTGGGATAATTaGGACTTGAGATCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTMDWDN*DLRSPQ Trigger: TTGGGGAGATCTCAAGTCCCAATTATCCCAATCCAT...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGTAAATTATTCAGGAATTTCAAGCAGGTTAAATGAGGGAAGATCGGATATTTTCTCCAAAACGTaGGCAGCCGTCAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FAVNYSGISSRLNEGRSDIFSKT*AAVSTQ Trigger: CTGGGTGCTGACGGCTGCTCACGTTTTGGAGAAAAT...ATCCGATCTTCCCTCATTTAACCTGCTTGAAATTCCTGAATAATTTACAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR GCA 90 bp | CAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPCLHADSLTIKFSINHTPLSPV*RFLKRL Trigger: TAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAGG...AGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTATTTTGGCACAGGAGATaGGATCTCCATGGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLFWHRR*DLHGNE Trigger: TTCGTTACCATGGAGATCCCATCTCCTGTGCCAAAA...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACTTCCATGTAGTAATATaGCTCTTCACACGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDQPCLHADSLTIKFSINFHVVI*LFTRVV Trigger: CACTACACGTGTGAAGAGCCATATTACTACATGGAA...GTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTAAGTTATTGCAGAAGTaGCTACAGGGGACATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HADSLTIKFSINHTPTSSKLLQK*LQGTSV Trigger: TACAGATGTCCCCTGTAGCCACTTCTGCAATAACTT...AGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTCCTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSPLSPV*RFLKRL Trigger: TAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAGG...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGATCGGATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTATTCATTTATGTCTATaGCAGTGTAGTATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: REDRIRYPCGIAQDRRVSIHLCL*QCSMLQ Trigger: TTGCAGCATACTACACTGCCATAGACATAAATGAAT...AGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTATCCGATCTTCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | CAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCCATCGTTGTGAAAATTCATTTATGTCTATaGCAGTGTAGTATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSALTILPHLLSIVVKIHLCL*QCSMLQ Trigger: TTGCAGCATACTACACTGCCATAGACATAAATGAAT...TTTCACAACGATGGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTAAATTATTCAGGAATTTCAAGCAGGTTAAATGAGGGAAGATCGGATATGGATTGGGATAATTaGGACTTGAGATCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FAVNYSGISSRLNEGRSDMDWDN*DLRSPQ Trigger: TTGGGGAGATCTCAAGTCCCAATTATCCCAATCCAT...ATCCGATCTTCCCTCATTTAACCTGCTTGAAATTCCTGAATAATTTACAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTAAATTATTCAGGAATTTCAAGCAGGTTAAATGAGGGAAGATCGGATATTTGTCCGTGTGTTTaGGTCATCTTCTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FAVNYSGISSRLNEGRSDICPCV*VIFFLP Trigger: TGGAAGAAAGAAGATGACCCAAACACACGGACAAAT...ATCCGATCTTCCCTCATTTAACCTGCTTGAAATTCCTGAATAATTTACAGCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | CACCCGGTGAGACGTTGTACTCTGAGGAGGTGCCTGGTAGGCAGATaGGGGAGACTTTGGGTCCCATTTTCACAGGGTCTTTCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPVRRCTLRRCLVGR*GRLWVPFSQGLSAA Trigger: TGCAGCTGAAAGACCCTGTGAAAATGGGACCCAAAGTCTCCCCCATCTGCCTACCAGGCACCTCCTCAGAGTACAACGTCTCACCGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | CGTTGTACTCTGAGGAGGTGCCTGGTAGGCAGATGGGGGAGACTTTaGGTCCCATTTTCACAGGGTCTTTCAGCTGCACCAGGGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RCTLRRCLVGRWGRL*VPFSQGLSAAPGQC Trigger: ACATTGCCCTGGTGCAGCTGAAAGACCCTGTGAAAATGGGACCCAAAGTCTCCCCCATCTGCCTACCAGGCACCTCCTCAGAGTACAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS GCA 90 bp | CTCTGGCCACAGAGTCTCCCTTCCTCGATGTCTCCTGAGATTATCTaGACTGAGTCGTATGCACAGCTCTCTGACGGCTCTATGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LWPQSLPSSMSPEII*TESYAQLSDGSMST Trigger: TGTGGACATAGAGCCGTCAGAGAGCTGTGCATACGACTCAGTGCAGATAATCTCAGGAGACATCGAGGAAGGGAGACTCTGTGGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159463.8 ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS TCA 90 bp | TCTTCTCTCTGCATCGTCACCACCACTTGGAAGCCCTCCTGCAGCTaGATCTGGTATTCACACCTTGAGTTCTCCGGGTATGGATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLCIVTTTWKPSCS*IWYSHLEFSGYGLG Trigger: TCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTTCCAAGTGGTGGTGACGATGCAGAGAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | TATCCTCTGATGCACTTGAAAGGGCTCGGTGGGTACTCCACAGGCTaGAATACATCTTGGAAGCTCAATACCCAGCTGGTCATTTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: YPLMHLKGLGGYSTG*NTSWKLNTQLVIYP Trigger: TGGGTAAATGACCAGCTGGGTATTGAGCTTCCAAGATGTATTCCAGCCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCATCAGAGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | CAGGTTGTCCTCCAAATATCCTCTGATGCACTTGAAAGGGCTCGGTaGGTACTCCACAGGCTGGAATACATCTTGGAAGCTCAATACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVVLQISSDALERAR*VLHRLEYILEAQYP Trigger: TGGGTATTGAGCTTCCAAGATGTATTCCAGCCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCATCAGAGGATATTTGGAGGACAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | CTCTATGTCCACATGGGTAAAGTAAAGGTGAATCCCAAACCCCTCTaGGACTTCAATGTCCCAAGATTTCACGACGTCATTGGGGTACGC | + |
|
Preference number: 5 (lower is better) Translates to: LYVHMGKVKVNPKPL*DFNVPRFHDVIGVR Trigger: GCGTACCCCAATGACGTCGTGAAATCTTGGGACATTGAAGTCCCAGAGGGGTTTGGGATTCACCTTTACTTTACCCATGTGGACATAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159463.8 ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTTATCCTCTGATGCACTaGAAAGGGCTCGGTGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IKGCVPCLHLVRDAEFHAYPLMH*KGLGGY Trigger: GTACCCACCGAGCCCTTTCAAGTGCATCAGAGGATA...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACTTGGGGACCGTGACATaGGGGACCTGGAAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDQPCLHADSLTIKFSINLGTVT*GTWKAK Trigger: TTTTGCTTTCCAGGTCCCCAATGTCACGGTCCCCAA...GTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTCATTTTCCAAGAGAGTaGTCCTCACAGACATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKGCVPCLHLVRDAEFHAHFPRE*SSQTWS Trigger: GGACCATGTCTGTGAGGACAACTCTCTTGGAAAATG...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTATTGGGGACCGTGACATaGGGGACCTGGAAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLLGTVT*GTWKAK Trigger: TTTTGCTTTCCAGGTCCCCAATGTCACGGTCCCCAA...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS TCA 90 bp | GTAGTATGCTGCAAAGCCCGTAAACCGTTCTTCGTTGGAGAAGTCTaGGGTAAAGACCACCTGAAGTTTATTGTATGGGAACTGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVCCKARKPFFVGEV*GKDHLKFIVWELKL Trigger: GAGTTTCAGTTCCCATACAATAAACTTCAGGTGGTCTTTACCTCAGACTTCTCCAACGAAGAACGGTTTACGGGCTTTGCAGCATACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159463.8 ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGGCTGTGTTCCCTGTCTGCATCTTGTTAGAGATGCAGAGTTCCATGCTACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKGCVPCLHLVRDAEFHATRAMS*SKFVRV Trigger: CACACGGACAAATTTTGACAATGACATTGCCCTGGT...AGCATGGAACTCTGCATCTCTAACAAGATGCAGACAGGGAACACAGCCTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | CATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCATTTTCCAAGAGAGTaGTCCTCACAGACATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HADSLTIKFSINHTPTSSHFPRE*SSQTWS Trigger: GGACCATGTCTGTGAGGACAACTCTCTTGGAAAATG...AGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACTCCTCTTTCACCTGTTaGCAGGTTTCTAAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SDQPCLHADSLTIKFSINSSFTC*QVSKEV Trigger: AACCTCTTTAGAAACCTGCAAACAGGTGAAAGAGGA...GTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CCA 90 bp | AGCACATCGATACTCCCCACCTTCTTCATGTTCCATGTAGTAATATaGCTCTTCACACGTGTAGTGAACAACAGTACCAAACACACTATT | + |
|
Preference number: 5 (lower is better) Translates to: STSILPTFFMFHVVI*LFTRVVNNSTKHTI Trigger: AATAGTGTGTTTGGTACTGTTGTTCACTACACGTGTGAAGAGCCATATTACTACATGGAACATGAAGAAGGTGGGGAGTATCGATGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTAACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLTRAMS*SKFVRV Trigger: CACACGGACAAATTTTGACAATGACATTGCCCTGGT...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | GATCAACCCTGCCTCCATGCAGACTCTTTGACAATCAAGTTCAGCATTAACCATTTTGCCCCTCTGAGGTaGATAACAAAGACTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DQPCLHADSLTIKFSINHFAPLR*ITKTFF Trigger: AAAGAAAGTCTTTGTTATCAACCTCAGAGGGGCAAA...ATGGTTAATGCTGAACTTGATTGTCAAAGAGTCTGCATGGAGGCAGGGTTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTATTCAATCTTTGCAGGTaGTCCTCCAAATATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLFNLCR*SSKYPL Trigger: CAGAGGATATTTGGAGGACAACCTGCAAAGATTGAA...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTTTCAATCTTTGCAGGTaGTCCTCCAAATATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSFNLCR*SSKYPL Trigger: CAGAGGATATTTGGAGGACAACCTGCAAAGATTGAA...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGATATCCCTGTGGAATAGCGCAAGATAGAAGGGTTTCTGCCATGTTGTTAAATTTGTCCGTGTGTTaGGGTCATCTTCTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRYPCGIAQDRRVSAMLLNLSVC*GHLLSS Trigger: GGAAGAAAGAAGATGACCCAAACACACGGACAAATT...TAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTATTCGGTAAGTCTCACTAGAAAGAATAAAAGGCTGTGTTCCCTGTCTAATTTGTCCGTGTGTTaGGGTCATCTTCTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEYSVSLTRKNKRLCSLSNLSVC*GHLLSS Trigger: GGAAGAAAGAAGATGACCCAAACACACGGACAAATT...AGACAGGGAACACAGCCTTTTATTCTTTCTAGTGAGACTTACCGAATACTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS-3UTR CAA 90 bp | CAATCAAGTTCAGCATTAACCATACTCCCACATCTTCTCTCCATCGTTGTGAAATTTGCCCCTCTGAGGTaGATAACAAAGACTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSSSALTILPHLLSIVVKFAPLR*ITKTFF Trigger: AAAGAAAGTCTTTGTTATCAACCTCAGAGGGGCAAA...TTTCACAACGATGGAGAGAAGATGTGGGAGTATGGTTAATGCTGAACTTGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
||
| CDS CAA 72 bp | CACCCTGAGATCAGCCCCATGTCACCCGGTGAGACGTaGTACTCTGAGGAGGTGCCTGGTAGGCAGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HPEISPMSPGET*YSEEVPGRQMG Trigger: CCCCATCTGCCTACCAGGCACCTCCTCAGAGTACAACGTCTCACCGGGTGACATGGGGCTGATCTCAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 72 bp | TCTGAGGAGGTGCCTGGTAGGCAGATGGGGGAGACTTaGGGTCCCATTTTCACAGGGTCTTTCAGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SEEVPGRQMGET*GPIFTGSFSCT Trigger: GGTGCAGCTGAAAGACCCTGTGAAAATGGGACCCAAAGTCTCCCCCATCTGCCTACCAGGCACCTCCTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | CAGAGTCTCCCTTCCTCGATGTCTCCTGAGATTATCTaGACTGAGTCGTATGCACAGCTCTCTGACGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSLPSSMSPEII*TESYAQLSDGS Trigger: AGAGCCGTCAGAGAGCTGTGCATACGACTCAGTGCAGATAATCTCAGGAGACATCGAGGAAGGGAGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159463.8 ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 72 bp | GGAAGCCCTCCTGCAGCTGAATCTGGTATTCACACCTaGAGTTCTCCGGGTATGGATTGGGATAATTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSPPAAESGIHT*SSPGMDWDNWD Trigger: GTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 72 bp | CTTTGCAGGTTGTCCTCCAAATATCCTCTGATGCACTaGAAAGGGCTCGGTGGGTACTCCACAGGCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LCRLSSKYPLMH*KGLGGYSTGWN Trigger: ATTCCAGCCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCATCAGAGGATATTTGGAGGACAACCTGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 90 bp | CCACCACTTGGAAGCCCTCCTGCAGCTGAATCTGGTATTCACACCTaGAGTTCTCCGGGTATGGATTGGGATAATTGGGACTTGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: PPLGSPPAAESGIHT*SSPGMDWDNWDLRS Trigger: AGATCTCAAGTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTTCCAAGTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS TCA 72 bp | GAAGCCCTCCTGCAGCTGAATCTGGTATTCACACCTTaGGTTCTCCGGGTATGGATTGGGATAATTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: EALLQLNLVFTP*VLRVWIGIIGT Trigger: AGTCCCAATTATCCCAATCCATACCCGGAGAACTCAAGGTGTGAATACCAGATTCAGCTGCAGGAGGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | CAGGCCTTACAGTGGGGTTCTCCTCTTTCACCTGTTTaGAGGTTTCTAAAGAGGTTACTGGTACCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QALQWGSPLSPV*RFLKRLLVPLP Trigger: GGGCAAAGGTACCAGTAACCTCTTTAGAAACCTGCAAACAGGTGAAAGAGGAGAACCCCACTGTAAGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CCA 72 bp | CTCCAAATATCCTCTGATGCACTTGAAAGGGCTCGGTaGGTACTCCACAGGCTGGAATACATCTTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LQISSDALERAR*VLHRLEYILEA Trigger: AGCTTCCAAGATGTATTCCAGCCTGTGGAGTACCCACCGAGCCCTTTCAAGTGCATCAGAGGATATTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 90 bp | TCACAGGGTCTTTCAGCTGCACCAGGGCAATGTCATTGTCAAAATTaGTCCGTGTGTTTGGGTCATCTTCTTTCTTCCAGCTGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: SQGLSAAPGQCHCQN*SVCLGHLLSSSWDE Trigger: TTCATCCCAGCTGGAAGAAAGAAGATGACCCAAACACACGGACAAATTTTGACAATGACATTGCCCTGGTGCAGCTGAAAGACCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CAA 90 bp | GGTCCCATTTTCACAGGGTCTTTCAGCTGCACCAGGGCAATGTCATaGTCAAAATTTGTCCGTGTGTTTGGGTCATCTTCTTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPIFTGSFSCTRAMS*SKFVRVFGSSSFFQ Trigger: CTGGAAGAAAGAAGATGACCCAAACACACGGACAAATTTTGACAATGACATTGCCCTGGTGCAGCTGAAAGACCCTGTGAAAATGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS TCA 72 bp | TTCGCAATGGGATCTGGAATTCCACAATACACAGGTTaGCATTTTAGACCGGAGTTGCTCCACTGTCCATCG | + |
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Preference number: 6 (lower is better) Translates to: FAMGSGIPQYTG*HFRPELLHCPS Trigger: CGATGGACAGTGGAGCAACTCCGGTCTAAAATGTCAACCTGTGTATTGTGGAATTCCAGATCCCATTGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | GAGACTTTGGGTCCCATTTTCACAGGGTCTTTCAGCTaGACCAGGGCAATGTCATTGTCAAAATTTGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: ETLGPIFTGSFS*TRAMSLSKFVR Trigger: ACGGACAAATTTTGACAATGACATTGCCCTGGTGCAGCTGAAAGACCCTGTGAAAATGGGACCCAAAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS TCA 72 bp | AGCTTCCAACCCTTCTTTTGCCCCATTAGGTCAGTTTaGAAGACAATGCCGAGAGTATTGCTCTGGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SFQPFFCPIRSV*KTMPRVLLWVL Trigger: TAGAACCCAGAGCAATACTCTCGGCATTGTCTTTCAAACTGACCTAATGGGGCAAAAGAAGGGTTGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS TCA 72 bp | GCTCCACTGTCCATCGCTTTGACAAGTGGAATAGTATaGAGTAGAGCTAACATGTCCCTCCACAACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: APLSIALTSGIV*SRANMSLHNFK Trigger: TTTGAAGTTGTGGAGGGACATGTTAGCTCTACTTCATACTATTCCACTTGTCAAAGCGATGGACAGTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | TGTGCATTCATTTATGTCTATGGCAGTGTAGTATGCTaGAAAGCCCGTAAACCGTTCTTCGTTGGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: CAFIYVYGSVVC*KARKPFFVGEV Trigger: GACTTCTCCAACGAAGAACGGTTTACGGGCTTTGCAGCATACTACACTGCCATAGACATAAATGAATGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS TCA 72 bp | ACATACATTAAAGGGTCGGAGATTTTCTCCAAAACGTaGGCAGCCGTCAGCACCCAGTACTCATTAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: TYIKGSEIFSKT*AAVSTQYSLIR Trigger: TCTTATTAATGAGTACTGGGTGCTGACGGCTGCTCACGTTTTGGAGAAAATCTCCGACCCTTTAATGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | ATCTGTGCATTCATTTATGTCTATGGCAGTGTAGTATaGTGCAAAGCCCGTAAACCGTTCTTCGTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: ICAFIYVYGSVV*CKARKPFFVGE Trigger: TTCTCCAACGAAGAACGGTTTACGGGCTTTGCAGCATACTACACTGCCATAGACATAAATGAATGCACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS GCA 72 bp | ACAGGTTATCTTCACCACATCTTTAAACACGTATTTTaGCTTATCGGGCTGCCAAGTAGAATTGGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TGYLHHIFKHVF*LIGLPSRIGSD Trigger: ATCACTGCCAATTCTACTTGGCAGCCCGATAAGGCAAAATACGTGTTTAAAGATGTGGTGAAGATAACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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| CDS CCA 72 bp | ATACTCCCCACCTTCTTCATGTTCCATGTAGTAATATaGCTCTTCACACGTGTAGTGAACAACAGTACCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILPTFFMFHVVI*LFTRVVNNSTK Trigger: TTTGGTACTGTTGTTCACTACACGTGTGAAGAGCCATATTACTACATGGAACATGAAGAAGGTGGGGAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160505.8 ENSMUST00000162443.8 |
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