Pregenerated sensors for C1RL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038527Ensembl transcript IDs: ENSMUST00000049124.10
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGTGGTGGAGCCCGGAAGGTGAAATGGGTGCTCAGGCAGGTCTaGGGGGCAACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: YSGGARKVKWVLRQV*GATGRNPGDRACWA Trigger: TGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTTGCCCCGCAGACCTGCCTGAGCACCCATTTCACCTTCCGGGCTCCACCACTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR GCA 90 bp | AGTGACTTAAATGGGGTCTCCCGGTTTCAAGTGGATCCTCACTCCTaGCCGTTCTTAGCAGGGACCTCCACAGCACTGGCTGGCCACTCC | + |
|
Preference number: 1 (lower is better) Translates to: SDLNGVSRFQVDPHS*PFLAGTSTALAGHS Trigger: GGAGTGGCCAGCCAGTGCTGTGGAGGTCCCTGCTAAGAACGGGCAGGAGTGAGGATCCACTTGAAACCGGGAGACCCCATTTAAGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 90 bp | CCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGCGTGGTCTaGGGAGGCGGGGCTTTCTCTTGGCAGTGGGTTGCTGAATCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: PGEQKVLFLIWDSVV*GGGAFSWQWVAESV Trigger: CACTGATTCAGCAACCCACTGCCAAGAGAAAGCCCCGCCTCCCCAGACCACGCTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 90 bp | GCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTaGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: ARNALGDEGQQESES*WYNLHRNRPSQGWS Trigger: ACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 90 bp | CTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTaGGGCATGAATGACAGAAAACACACCCTCTGCCAACAGGGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: LPQATGSVGASVSSL*GMNDRKHTLCQQGG Trigger: CCCTCCCTGTTGGCAGAGGGTGTGTTTTCTGTCATTCATGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 90 bp | GGCAAACATGCTGGGATGAATGAAGCCTCAGTGGAGAACCAGCTTTaGAACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GKHAGMNEASVENQL*NFHKPRDLWELPFP Trigger: AGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATTCATCCCAGCATGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 90 bp | AAGCGGGAGCATTGCCGTGAGTTCAAGGCCAGCCTGGCTACAGAGTaGAATCCTGCCTTGAACAAACAAAAAGACATTCTGAGCAAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: KREHCREFKASLATE*NPALNKQKDILSKG Trigger: ACCTTTGCTCAGAATGTCTTTTTGTTTGTTCAAGGCAGGATTTCACTCTGTAGCCAGGCTGGCCTTGAACTCACGGCAATGCTCCCGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATAGAAAACACACCCTCTaGCAACAGGGAGGGAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: GQLGGIPETEHAGQTCWDRKHTL*QQGGRT Trigger: AGTCCTCCCTCCCTGTTGGCAGAGGGTGTGTTTTCT...ATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGTCTCCCGGTTTCAAGTaGATCCTCACTCCTGCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: VHLLRLAMPWVMRASRKVSPGFK*ILTPAR Trigger: ACGGGCAGGAGTGAGGATCCACTTGAAACCGGGAGA...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR TCA 90 bp | AACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATGAATCCACCACTGCCCTGCTaGACCAGTGACTTAAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: NWEESRRQSMLGKHAGMNPPLPC*TSDLNG Trigger: CCCATTTAAGTCACTGGTTCAGCAGGGCAGTGGTGG...ATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGCTCCACAGCACTGGCTaGCCACTCCTCGGGCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQLHSTG*PLLGPP Trigger: AGGGGGCCCGAGGAGTGGCCAGCCAGTGCTGTGGAG...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCGAGTCTGTACAGTGGTaGAGCCCGGAAGGTGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: MPWVMRASRKVRAGGTIFESVQW*SPEGEM Trigger: CATTTCACCTTCCGGGCTCCACCACTGTACAGACTC...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTGGAGGGAGGACTGGATaGGACAACAGGCGATGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSGGRTG*DNRRCS Trigger: GGAGCATCGCCTGTTGTCTCATCCAGTCCTCCCTCC...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGAGTTCAAGGCCAGCCTaGCTACAGAGTGAAATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QQESESWWYNLHRNRPSQSSRPA*LQSEIL Trigger: CAGGATTTCACTCTGTAGCCAGGCTGGCCTTGAACT...CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGGGCGGGGCTTTCTCTTaGCAGTGGGTTGCTGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQGGAFS*QWVAES Trigger: TGATTCAGCAACCCACTGCCAAGAGAAAGCCCCGCC...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTCCTCTTTGTGAGGCATaGATGACAGAAAACACACCC | + |
|
Preference number: 2 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSPLCEA*MTENTP Trigger: GGGTGTGTTTTCTGTCATTCATGCCTCACAAAGAGG...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCACAGTAGATGTAAAATaGAATCGAGTATTGCCACGA | + |
|
Preference number: 2 (lower is better) Translates to: MPWVMRASRKVRAGGTIFTVDVK*NRVLPR Trigger: TCGTGGCAATACTCGATTCCATTTTACATCTACTGT...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTTTTGTGAGGCATGAATaGCAGAAAACACACCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSFVRHE*QKTHPL Trigger: CAGAGGGTGTGTTTTCTGTCATTCATGCCTCACAAA...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTTCCGTTTCCTCTTTGTaGGGCATGAATGACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSSVSSL*GMNDRK Trigger: TTTTCTGTCATTCATGCCTCACAAAGAGGAAACGGA...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CAA 90 bp | GAGTATTGCCACGATTGTCTGGAGAAGCTGGGACAGGAGGCATATTaGAAGCTCATTGTAAGGGTTTTCAGAATATTTCAGAAACACAAG | + |
|
Preference number: 2 (lower is better) Translates to: EYCHDCLEKLGQEAY*KLIVRVFRIFQKHK Trigger: CTTGTGTTTCTGAAATATTCTGAAAACCCTTACAATGAGCTTCAAATATGCCTCCTGTCCCAGCTTCTCCAGACAATCGTGGCAATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR GCA 72 bp | GGAGCCCGGAAGGTGAAATGGGTGCTCAGGCAGGTCTaGGGGGCAACTGGGAGGAATCCCGGAGACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GARKVKWVLRQV*GATGRNPGDRA Trigger: TGCTCTGTCTCCGGGATTCCTCCCAGTTGCCCCGCAGACCTGCCTGAGCACCCATTTCACCTTCCGGGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | CCCAGTGTTTGGGAGGCTGAAGCGGGAGCATTGCCGTaGGTTCAAGGCCAGCCTGGCTACAGAGTGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PSVWEAEAGALP*VQGQPGYRVKS Trigger: GGATTTCACTCTGTAGCCAGGCTGGCCTTGAACTCACGGCAATGCTCCCGCTTCAGCCTCCCAAACACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR GCA 72 bp | AATGGGGTCTCCCGGTTTCAAGTGGATCCTCACTCCTaGCCGTTCTTAGCAGGGACCTCCACAGCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NGVSRFQVDPHS*PFLAGTSTALA Trigger: AGCCAGTGCTGTGGAGGTCCCTGCTAAGAACGGGCAGGAGTGAGGATCCACTTGAAACCGGGAGACCCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 72 bp | CAGAAGGTTCTGTTTCTGATTTGGGACAGCGTGGTCTaGGGAGGCGGGGCTTTCTCTTGGCAGTGGGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QKVLFLIWDSVV*GGGAFSWQWVA Trigger: AGCAACCCACTGCCAAGAGAAAGCCCCGCCTCCCCAGACCACGCTGTCCCAAATCAGAAACAGAACCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGTGGAGAACCAGCTTaGGAACTTCCACAAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: VHLLRLAMPWVMRASRKVSGEPA*ELPQAT Trigger: CGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACT...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 72 bp | GCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTaGTGGTACAATCTTCATAGAAACAGGCCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALGDEGQQESES*WYNLHRNRPSQ Trigger: CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | AAACACACCCTCTGCCAACAGGGAGGGAGGACTGGATaGGACAACAGGCGATGCTCCTGGCTTACAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KHTLCQQGGRTG*DNRRCSWLTVD Trigger: ATCTACTGTAAGCCAGGAGCATCGCCTGTTGTCTCATCCAGTCCTCCCTCCCTGTTGGCAGAGGGTGTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | CCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATaGATGAAGCCTCAGTGGAGAACCAGCTTTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: PGDRACWANMLG*MKPQWRTSFGT Trigger: AGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 72 bp | CTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTaGTACAATCTTCATAGAAACAGGCCTTCCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGDEGQQESESW*YNLHRNRPSQG Trigger: TCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | TGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCATGAATaGCAGAAAACACACCCTCTGCCAACAGGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CGSFRFLFVRHE*QKTHPLPTGRE Trigger: CTCCCTCCCTGTTGGCAGAGGGTGTGTTTTCTGTCATTCATGCCTCACAAAGAGGAAACGGAAGCTCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | GCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTaGGGCATGAATGACAGAAAACACACCCTCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ATGSVGASVSSL*GMNDRKHTLCQ Trigger: TTGGCAGAGGGTGTGTTTTCTGTCATTCATGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTGGTTCTGTTTCTGATTaGGGACAGCGTGGTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSGSVSD*GQRGLG Trigger: CCCCAGACCACGCTGTCCCAAATCAGAAACAGAACC...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCGGACAGGAGGCATATTaGAAGCTCATTGTAAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: MPWVMRASRKVRAGGTIFGQEAY*KLIVRV Trigger: AACCCTTACAATGAGCTTCAAATATGCCTCCTGTCC...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGCGAGTATTGCCACGATaGTCTGGAGAAGCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QQESESWWYNLHRNRPSQRVLPR*SGEAGT Trigger: TGTCCCAGCTTCTCCAGACAATCGTGGCAATACTCG...CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | TTAAAGACTTGTGCCACCACTGCCCTGCTGAACCAGTaGCTTAAATGGGGTCTCCCGGTTTCAAGTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LKTCATTALLNQ*LKWGLPVSSGS Trigger: GGATCCACTTGAAACCGGGAGACCCCATTTAAGTCACTGGTTCAGCAGGGCAGTGGTGGCACAAGTCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | GATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCATaGATGACAGAAAACACACCCTCTGCCAACAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLWELPFPLCEA*MTENTPSANRE Trigger: CTCCCTGTTGGCAGAGGGTGTGTTTTCTGTCATTCATGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | GAGACAGAGCATGCTGGGCAAACATGCTGGGATGAATaGAGCCTCAGTGGAGAACCAGCTTTGGAACTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ETEHAGQTCWDE*SLSGEPALELP Trigger: TGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 72 bp | TGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATaGAGTCTGTACAGTGGTGGAGCCCGGAAGGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WYNLHRNRPSQG*SLYSGGARKVK Trigger: TTTCACCTTCCGGGCTCCACCACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR TCA 72 bp | CATTGCCGTGAGTTCAAGGCCAGCCTGGCTACAGAGTaGAATCCTGCCTTGAACAAACAAAAAGACATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HCREFKASLATE*NPALNKQKDIL Trigger: CAGAATGTCTTTTTGTTTGTTCAAGGCAGGATTTCACTCTGTAGCCAGGCTGGCCTTGAACTCACGGCAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CCA 72 bp | AACAGGCGATGCTCCTGGCTTACAGTAGATGTAAAATaGAATCGAGTATTGCCACGATTGTCTGGAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NRRCSWLTVDVK*NRVLPRLSGEA Trigger: AGCTTCTCCAGACAATCGTGGCAATACTCGATTCCATTTTACATCTACTGTAAGCCAGGAGCATCGCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | TCACTCCTGCCCGTTCTTAGCAGGGACCTCCACAGCACTGGCTGGCCACTCCTCGACCATAGATGCTGGTaGAGGCTTGCCAGGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPVLSRDLHSTGWPLLDHRCW*RLARGS Trigger: ACTTCCCCTGGCAAGCCTTCACCAGCATCTATGGTC...GAGGAGTGGCCAGCCAGTGCTGTGGAGGTCCCTGCTAAGAACGGGCAGGAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR GCA 90 bp | GGGCAACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATACACCACATAGACGCTaGCGCTGTCTCCCTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLGGIPETEHAGQTCWDTPHRR*RCLPGR Trigger: TCTGCCAGGGAGACAGCGGCAGCGTCTATGTGGTGT...ATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATGAATGTTCGCTGCCTCTGGTaGAGCCAGGCTTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NWEESRRQSMLGKHAGMNVRCLW*SQASQA Trigger: GGCCTGTGAAGCCTGGCTCCACCAGAGGCAGCGAAC...ATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCCTGCCGCTGTCTCCCTaGCAGACACTGTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPWVMRASRKVRAGGTIFLPLSP*QTLFTC Trigger: GCAGGTGAACAGTGTCTGCCAGGGAGACAGCGGCAG...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGAGCTCCGGGTGTGGTaGCAGCCTCGGTGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQESESWWYNLHRNRPSQELRVW*QPRCPH Trigger: ATGGGGACACCGAGGCTGTCACCACACCCGGAGCTC...CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGTCTTGGCAGTGGTTCTaGATCTTGGGAGCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLLRLAMPWVMRASRKVSWQWF*ILGAPG Trigger: ACCCGGAGCTCCCAAGATTCAGAACCACTGCCAAGA...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR GCA 90 bp | AACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCACCAGGGGATGTCAGTTaGTGTGGTGACTGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFHKPRDLWELPFPLCEAPGDVS*CGDCWA Trigger: GGCCCAGCAGTCACCACAGCAACTGACATCCCCTGG...TGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGCGTGGTCTGGGGAGGGCACAGAGGCCTGTGTaGGGCAAGTATGGAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRAEGSVSDLGQRGLGRAQRPV*GKYGGF Trigger: GAATCCTCCATACTTGCCCCACACAGGCCTCTGTGC...CCTCCCCAGACCACGCTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AATGAAGCCTCAGTGGAGAACCAGCTTTGGAACTTCCACAAGCCACGGGATCTGGTCCGGCAGACAGACTaGGAGGAGATTGGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEASVENQLWNFHKPRDLVRQTD*EEIGPQ Trigger: CTGGGGCCCAATCTCCTCCCAGTCTGTCTGCCGGAC...CAGATCCCGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCTGTCAGTTGCTGTGGTaGCTGCTGGGCCAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPWVMRASRKVRAGGTIFCQLLW*LLGQKH Trigger: GTGCTTTTGGCCCAGCAGTCACCACAGCAACTGACA...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCGGCTCTCCTGGCCTTTaGGATATGGCTCTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: MPWVMRASRKVRAGGTIFGSPGL*DMALGI Trigger: GATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCC...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | TCACTCCTGCCCGTTCTTAGCAGGGACCTCCACAGCACTGGCTGGCCACTCCTCCATTCTGGTTCCTTCTaGGATAGATGCTATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLPVLSRDLHSTGWPLLHSGSF*DRCYPW Trigger: CCAAGGATAGCATCTATCTCAGAAGGAACCAGAATG...GAGGAGTGGCCAGCCAGTGCTGTGGAGGTCCCTGCTAAGAACGGGCAGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCATGCTGTGGTGACTGCTaGGCCAAAAGCACAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFHKPRDLWELPFPLCEACCGDC*AKSTEA Trigger: GGCCTCTGTGCTTTTGGCCCAGCAGTCACCACAGCA...TGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCGCCTCGATGTCAGTGTaGCTCTCCTGGCCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPWVMRASRKVRAGGTIFASMSV*LSWPLR Trigger: TCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGC...GAAGATTGTACCACCAGCTCTCACTTTCCTGCTGGCCCTCATCACCCAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | GGGCAACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATTTCACAGTCTGGGGATaGCTCCAGATCAAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLGGIPETEHAGQTCWDFTVWG*LQIKVL Trigger: CAGGACTTTGATCTGGAGCCATCCCCAGACTGTGAA...ATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGGTGTCCCCATTGGGTTaGTTCACAGCTACAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLLRLAMPWVMRASRKVVSPLG*FTATAW Trigger: CCAAGCTGTAGCTGTGAACCAACCCAATGGGGACAC...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTAGAAGCCGTACCCCTTaGCACACCCGATGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSRSRTP*HTRCPR Trigger: CCTGGGGCATCGGGTGTGGCAAGGGGTACGGCTTCT...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | GGGCAACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATGCCAGGAAACCTTTGTaGAGGTGTGTGATTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLGGIPETEHAGQTCWDARKPL*RCVILL Trigger: GAGCAAAATCACACACCTCCACAAAGGTTTCCTGGC...ATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATGAATCCTCGGTGTCCCCATTaGGTTGGTTCACAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NWEESRRQSMLGKHAGMNPRCPH*VGSQLQ Trigger: CTGTAGCTGTGAACCAACCCAATGGGGACACCGAGG...ATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | AATGAAGCCTCAGTGGAGAACCAGCTTTGGAACTTCCACAAGCCACGGGATCTGGATACAAACTCCCTGTaGCCAGGAGGGTTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NEASVENQLWNFHKPRDLDTNSL*PGGFPR Trigger: TCTGGGGAACCCTCCTGGTCACAGGGAGTTTGTATC...CAGATCCCGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGCGTGGTCTGGGGAGGTCGTCTATGTCTGTGTaGCCCAGAAACACTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PRRAEGSVSDLGQRGLGRSSMSV*PRNTST Trigger: TGTGGAAGTGTTTCTGGGTCACACAGACATAGACGA...CCTCCCCAGACCACGCTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTGCTGTTCTCCAGCTCTaGGACCAGGCCTCTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSAVLQL*DQASEP Trigger: GGGTTCAGAGGCCTGGTCCCAGAGCTGGAGAACAGC...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGTTTGAGATATGGCTCTaGGTATCCAGGGGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLLRLAMPWVMRASRKVFEIWL*VSRGCQ Trigger: CTGACATCCCCTGGATACCCAGAGCCATATCTCAAA...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGGATAGATGCTATCCTTaGGGTAGATGGTATGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLLRLAMPWVMRASRKVDRCYP*GRWYGQ Trigger: CTGCCCATACCATCTACCCCAAGGATAGCATCTATC...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGACTAGACTGGGAGGAGATTaGGCCCCAGAGGGACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LELRNPPVSASQVLGLKTRLGGD*APEGLS Trigger: AGAGAGTCCCTCTGGGGCCCAATCTCCTCCCAGTCT...AGTCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AATGAAGCCTCAGTGGAGAACCAGCTTTGGAACTTCCACAAGCCACGGGATCTGCTTCACAGGCCTCCCTaGGAGCTACAGGCAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NEASVENQLWNFHKPRDLLHRPP*ELQAVL Trigger: CAAAACTGCCTGTAGCTCCCAGGGAGGCCTGTGAAG...CAGATCCCGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR GCA 90 bp | AACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCACAGACACTGTTCACCTaGATCTCTTCCCCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NFHKPRDLWELPFPLCEAQTLFT*ISSPTQ Trigger: CTGTGTTGGGGAAGAGATGCAGGTGAACAGTGTCTG...TGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGACTAGTTGCTGTGGTGACTaGTGGGCCAAAAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LELRNPPVSASQVLGLKTSCCGD*WAKSTE Trigger: CTCTGTGCTTTTGGCCCAGCAGTCACCACAGCAACT...AGTCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGACTCTGGCCTTTGAGATATaGCTCTGGGTATCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LELRNPPVSASQVLGLKTLAFEI*LWVSRG Trigger: TCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAG...AGTCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | AACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCAAGAACCAAAAGTGTTTaGGTTCTCAGCAAGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NFHKPRDLWELPFPLCEARTKSV*VLSKGD Trigger: GTCCCCCTTGCTGAGAACCCAAACACTTTTGGTTCT...TGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGACTTCCAGATCAAAGTCCTaGAAGGTCAGCCTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LELRNPPVSASQVLGLKTSRSKS*KVSLTA Trigger: TGCTGTGAGGCTGACCTTCCAGGACTTTGATCTGGA...AGTCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTGTCGCCTTCACAGTCTaGGGATGGCTCCAGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSVAFTV*GWLQIK Trigger: TTTGATCTGGAGCCATCCCCAGACTGTGAAGGCGAC...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CAA 72 bp | TCCTGGCTTACAGTAGATGTAAAATGGAATCGAGTATaGCCACGATTGTCTGGAGAAGCTGGGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWLTVDVKWNRV*PRLSGEAGTGG Trigger: GCCTCCTGTCCCAGCTTCTCCAGACAATCGTGGCAATACTCGATTCCATTTTACATCTACTGTAAGCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGTATCCTTGGGGTAGATaGTATGGGCAGCCGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQYPWGR*YGQPSG Trigger: TCCTGACGGCTGCCCATACCATCTACCCCAAGGATA...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGATCTGTTCCTCCAGTTaGAATTGTGACAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQICSSS*NCDRVA Trigger: GGCGACTCTGTCACAATTTCAACTGGAGGAACAGAT...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGGGATGGAGTCTGTACAGTAGCTACAGGCAGTTTTaGGTATTTCAACTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WWYNLHRNRPSQGWSLYSSYRQF*VFQLCC Trigger: ACAACAAAGTTGAAATACTCAAAACTGCCTGTAGCT...ACTGTACAGACTCCATCCCTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CAA 72 bp | CACGATTGTCTGGAGAAGCTGGGACAGGAGGCATATTaGAAGCTCATTGTAAGGGTTTTCAGAATATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDCLEKLGQEAY*KLIVRVFRIFQ Trigger: CTGAAATATTCTGAAAACCCTTACAATGAGCTTCAAATATGCCTCCTGTCCCAGCTTCTCCAGACAATCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| 3UTR CAA 72 bp | ACAGTAGATGTAAAATGGAATCGAGTATTGCCACGATaGTCTGGAGAAGCTGGGACAGGAGGCATATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVDVKWNRVLPR*SGEAGTGGIFE Trigger: TTCAAATATGCCTCCTGTCCCAGCTTCTCCAGACAATCGTGGCAATACTCGATTCCATTTTACATCTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | CCACAGGCCGCTGTGGTAGAGGGTCTCGTTGTCCGGCAGACAGACTaGGAGGAGATTGGGCCCCAGAGGGACTCTCTGCTCAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQAAVVEGLVVRQTD*EEIGPQRDSLLKFQ Trigger: CTGGAACTTGAGCAGAGAGTCCCTCTGGGGCCCAATCTCCTCCCAGTCTGTCTGCCGGACAACGAGACCCTCTACCACAGCGGCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 90 bp | TGGCCACCCAGCGGAGAGCAAGATCGTCCCACACCACATAGACGCTaGCGCTGTCTCCCTGGCAGACACTGTTCACCTGCATCTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPPSGEQDRPTPHRR*RCLPGRHCSPASLP Trigger: GGGAAGAGATGCAGGTGAACAGTGTCTGCCAGGGAGACAGCGGCAGCGTCTATGTGGTGTGGGACGATCTTGCTCTCCGCTGGGTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGGCCCACACAGCCGGGTaGCATCTGTTCCTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHLLRLAMPWVMRASRKVAHTAG*HLFLQL Trigger: CAACTGGAGGAACAGATGCAACCCGGCTGTGTGGGC...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | TCACTCCTGCCCGTTCTTAGCAGGGACCTCCACAGCACTGGCTGGCCACTCCTCGTTCACAGCTACAGCTaGGTAGAGAGCCAGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SLLPVLSRDLHSTGWPLLVHSYS*VESQET Trigger: GGTTTCCTGGCTCTCTACCAAGCTGTAGCTGTGAAC...GAGGAGTGGCCAGCCAGTGCTGTGGAGGTCCCTGCTAAGAACGGGCAGGAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 90 bp | TCCTGGCCTTTGAGATATGGCTCTGGGTATCCAGGGGATGTCAGTTaGTGTGGTGACTGCTGGGCCAAAAGCACAGAGGCCTGTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SWPLRYGSGYPGDVS*CGDCWAKSTEACVG Trigger: CCCCACACAGGCCTCTGTGCTTTTGGCCCAGCAGTCACCACAGCAACTGACATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | TTCCCCAAAGGAGCCACCAGCACATCTTGCTCATGCAGCTTGTGGTaGGAGAACTCCATAGGCTGTTCTCCAGCTCTGGGACCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPKGATSTSCSCSLW*ENSIGCSPALGPGL Trigger: GAGGCCTGGTCCCAGAGCTGGAGAACAGCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | GGATTCCCCAAAGGAGCCACCAGCACATCTTGCTCATGCAGCTTGTaGTGGGAGAACTCCATAGGCTGTTCTCCAGCTCTGGGACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFPKGATSTSCSCSL*WENSIGCSPALGPG Trigger: GCCTGGTCCCAGAGCTGGAGAACAGCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGCGTGGTCTGGGGAGGGCTTGCCAGGGGAAGTaGCCCAGTTTAGCTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRRAEGSVSDLGQRGLGRACQGK*PSLARE Trigger: TTCCCGAGCTAAACTGGGCAACTTCCCCTGGCAAGC...CCTCCCCAGACCACGCTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 90 bp | CAAACCCCTCTGGAGCCTCGATGTCAGTGTGGCTCTCCTGGCCTTTaGGATATGGCTCTGGGTATCCAGGGGATGTCAGTTGCTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTPLEPRCQCGSPGL*DMALGIQGMSVAVV Trigger: CACCACAGCAACTGACATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGAGGGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | CTCACAGCAAACCCCTCTGGAGCCTCGATGTCAGTGTGGCTCTCCTaGCCTTTGAGATATGGCTCTGGGTATCCAGGGGATGTCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTANPSGASMSVWLS*PLRYGSGYPGDVSC Trigger: GCAACTGACATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGAGGGGTTTGCTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | AAGGTCAGCCTCACAGCAAACCCCTCTGGAGCCTCGATGTCAGTGTaGCTCTCCTGGCCTTTGAGATATGGCTCTGGGTATCCAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVSLTANPSGASMSV*LSWPLRYGSGYPGD Trigger: ATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGAGGGGTTTGCTGTGAGGCTGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | ACAGAGTCGCCTTCACAGTCTGGGGATGGCTCCAGATCAAAGTCCTaGAAGGTCAGCCTCACAGCAAACCCCTCTGGAGCCTCGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TESPSQSGDGSRSKS*KVSLTANPSGASMS Trigger: TGACATCGAGGCTCCAGAGGGGTTTGCTGTGAGGCTGACCTTCCAGGACTTTGATCTGGAGCCATCCCCAGACTGTGAAGGCGACTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 90 bp | GCCGCCCACACAGCCGGGTTGCATCTGTTCCTCCAGTTGAAATTGTaGCAGAGTCGCCTTCACAGTCTGGGGATGGCTCCAGATCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAHTAGLHLFLQLKL*QSRLHSLGMAPDQS Trigger: ACTTTGATCTGGAGCCATCCCCAGACTGTGAAGGCGACTCTGTCACAATTTCAACTGGAGGAACAGATGCAACCCGGCTGTGTGGGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | AGTGTTTGGGTTCTCAGCAAGGGGGACGACTGGTCTTCCACAGACTaGCACGCATTCAGGAACCTCTCCTCCATCCTGTCTGTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVWVLSKGDDWSSTD*HAFRNLSSILSVLP Trigger: TGGAAGGACAGACAGGATGGAGGAGAGGTTCCTGAATGCGTGCCAGTCTGTGGAAGACCAGTCGTCCCCCTTGCTGAGAACCCAAACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | CCTTTGTGGAGGTGTGTGATTTTGCTCTTGGAGGACGAGTGTGCCTaGAAGGTCAGCCGCAGGCTCCTACCAGAAGATACAAACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLWRCVILLLEDECA*KVSRRLLPEDTNSL Trigger: CAGGGAGTTTGTATCTTCTGGTAGGAGCCTGCGGCTGACCTTCCAGGCACACTCGTCCTCCAAGAGCAAAATCACACACCTCCACAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | TCGGGAAGAACCAAAAGTGTTTGGGTTCTCAGCAAGGGGGACGACTaGTCTTCCACAGACTGGCACGCATTCAGGAACCTCTCCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SGRTKSVWVLSKGDD*SSTDWHAFRNLSSI Trigger: GATGGAGGAGAGGTTCCTGAATGCGTGCCAGTCTGTGGAAGACCAGTCGTCCCCCTTGCTGAGAACCCAAACACTTTTGGTTCTTCCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 90 bp | ATTTCAACTTTGTTGTTAACCAGCCCATCTCCACACCAAACCCACTaGCGTAACCCCACAGGCCGCTGTGGTAGAGGGTCTCGTTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ISTLLLTSPSPHQTH*RNPTGRCGRGSRCP Trigger: CGGACAACGAGACCCTCTACCACAGCGGCCTGTGGGGTTACGTCAGTGGGTTTGGTGTGGAGATGGGCTGGTTAACAACAAAGTTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 90 bp | AAGTATGGAGGATTCCCCAAAGGAGCCACCAGCACATCTTGCTCATaGAGCTTGTGGTGGGAGAACTCCATAGGCTGTTCTCCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KYGGFPKGATSTSCS*SLWWENSIGCSPAL Trigger: CAGAGCTGGAGAACAGCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAATCCTCCATACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | CCTCAGTTCGCTGCCTCTGGTGGAGCCAGGCTTCACAGGCCTCCCTaGGAGCTACAGGCAGTTTTGAGTATTTCAACTTTGTTGTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: PQFAASGGARLHRPP*ELQAVLSISTLLLT Trigger: GGTTAACAACAAAGTTGAAATACTCAAAACTGCCTGTAGCTCCCAGGGAGGCCTGTGAAGCCTGGCTCCACCAGAGGCAGCGAACTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 90 bp | GAAACCTTTGTGGAGGTGTGTGATTTTGCTCTTGGAGGACGAGTGTaGCTGGAAGGTCAGCCGCAGGCTCCTACCAGAAGATACAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFVEVCDFALGGRV*LEGQPQAPTRRYKL Trigger: GAGTTTGTATCTTCTGGTAGGAGCCTGCGGCTGACCTTCCAGGCACACTCGTCCTCCAAGAGCAAAATCACACACCTCCACAAAGGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 90 bp | AGGAACCTCTCCTCCATCCTGTCTGTCCTTCCACTTCCACGAGGATaGGCAGCTAAGTGTCCCTGTCTGGTCTGCCTTATAATAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RNLSSILSVLPLPRG*AAKCPCLVCLIIRI Trigger: GATCCTTATTATAAGGCAGACCAGACAGGGACACTTAGCTGCCCATCCTCGTGGAAGTGGAAGGACAGACAGGATGGAGGAGAGGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 90 bp | CTTCCACTTCCACGAGGATGGGCAGCTAAGTGTCCCTGTCTGGTCTaGCTTATAATAAGGATCTTGGCAGTGGTTCTGAATCTTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPRGWAAKCPCLV*LIIRILAVVLNLGS Trigger: GCTCCCAAGATTCAGAACCACTGCCAAGATCCTTATTATAAGGCAGACCAGACAGGGACACTTAGCTGCCCATCCTCGTGGAAGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTTTGATACAGGGTTTCTCTGTGTAGCCCTACCTGTCCTGGAACTCAATCAGACTGGGAGGAGATaGGGCCCCAGAGGGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFDTGFLCVALPVLELNQTGRR*GPRGTL Trigger: GAGAGTCCCTCTGGGGCCCAATCTCCTCCCAGTCTG...ATTGAGTTCCAGGACAGGTAGGGCTACACAGAGAAACCCTGTATCAAAAACTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGTGGAGGTGTGTGATTTaGCTCTTGGAGGACGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQESESWWYNLHRNRPSQWRCVI*LLEDEC Trigger: ACACTCGTCCTCCAAGAGCAAAATCACACACCTCCA...CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | AATGAAGCCTCAGTGGAGAACCAGCTTTGGAACTTCCACAAGCCACGGGATCTGAGAGCCAGGAAACCTTaGTGGAGGTGTGTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NEASVENQLWNFHKPRDLRARKP*WRCVIL Trigger: CAAAATCACACACCTCCACAAAGGTTTCCTGGCTCT...CAGATCCCGTGGCTTGTGGAAGTTCCAAAGCTGGTTCTCCACTGAGGCTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | GTTCATCTTCTCAGGCTCGCAATGCCCTGGGTGATGAGGGCCAGCAGGAAAGTGGAGCTACAGGCAGTTTaGAGTATTTCAACTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHLLRLAMPWVMRASRKVELQAV*SISTLL Trigger: CAACAAAGTTGAAATACTCAAAACTGCCTGTAGCTC...CACTTTCCTGCTGGCCCTCATCACCCAGGGCATTGCGAGCCTGAGAAGATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 90 bp | CTATGTCTGTGTGACCCAGAAACACTTCCACATTCTGGTTCCTTCTaGGATAGATGCTATCCTTGGGGTAGATGGTATGGGCAGCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLCDPETLPHSGSF*DRCYPWGRWYGQPS Trigger: TGACGGCTGCCCATACCATCTACCCCAAGGATAGCATCTATCTCAGAAGGAACCAGAATGTGGAAGTGTTTCTGGGTCACACAGACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGAGCCACCAGCACATCTaGCTCATGCAGCTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQSHQHI*LMQLVV Trigger: CACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCT...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | TTGCTTGGTATAAAACCCAGGAGAGCAGAAGGTTCTGTTTCTGATTTGGGACAGGGTGTCCCCATTGGGTaGGTTCACAGCTACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGIKPRRAEGSVSDLGQGVPIG*VHSYSL Trigger: CAAGCTGTAGCTGTGAACCAACCCAATGGGGACACC...CTGTCCCAAATCAGAAACAGAACCTTCTGCTCTCCTGGGTTTTATACCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | AACTGGGAGGAATCCCGGAGACAGAGCATGCTGGGCAAACATGCTGGGATGAATAGTATTTCAACTTTGTaGTTAACCAGCCCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NWEESRRQSMLGKHAGMNSISTL*LTSPSP Trigger: TGGAGATGGGCTGGTTAACAACAAAGTTGAAATACT...ATTCATCCCAGCATGTTTGCCCAGCATGCTCTGTCTCCGGGATTCCTCCCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | AACTTCCACAAGCCACGGGATCTGTGGGAGCTTCCGTTTCCTCTTTGTGAGGCATTGAGTATTTCAACTTaGTTGTTAACCAGCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NFHKPRDLWELPFPLCEALSIST*LLTSPS Trigger: AGATGGGCTGGTTAACAACAAAGTTGAAATACTCAA...TGCCTCACAAAGAGGAAACGGAAGCTCCCACAGATCCCGTGGCTTGTGGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | CTGGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGACTCCAACACAGAACATATaGTCAGAAAACACCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LELRNPPVSASQVLGLKTPTQNI*SENTSV Trigger: AACTGAGGTGTTTTCTGACAATATGTTCTGTGTTGG...AGTCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGAAAGTGAGAGCTGGTGGTACAATCTTCATAGAAACAGGCCTTCCCAGCTTATAATAAGGATCTaGGCAGTGGTTCTGAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QQESESWWYNLHRNRPSQLIIRI*AVVLNL Trigger: AAGATTCAGAACCACTGCCAAGATCCTTATTATAAG...CTGGGAAGGCCTGTTTCTATGAAGATTGTACCACCAGCTCTCACTTTCCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTTTGATACAGGGTTTCTCTGTGTAGCCCTACCTGTCCTGGAACTCAATAGAGCAATATCTCCATaGAAGTTGTGGGACTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVFDTGFLCVALPVLELNRAISP*KLWDSC Trigger: ACATGAGTCCCACAACTTCAATGGAGATATTGCTCT...ATTGAGTTCCAGGACAGGTAGGGCTACACAGAGAAACCCTGTATCAAAAACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | CTCCCTGTGACCAGGAGGGTTCCCCAGAGGGGAACCTaGCCGCCCACACAGCCGGGTTGCATCTGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPVTRRVPQRGT*PPTQPGCICSS Trigger: GGAGGAACAGATGCAACCCGGCTGTGTGGGCGGCAAGGTTCCCCTCTGGGGAACCCTCCTGGTCACAGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | GCTGTGGTAGAGGGTCTCGTTGTCCGGCAGACAGACTaGGAGGAGATTGGGCCCCAGAGGGACTCTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVVEGLVVRQTD*EEIGPQRDSLL Trigger: GAGCAGAGAGTCCCTCTGGGGCCCAATCTCCTCCCAGTCTGTCTGCCGGACAACGAGACCCTCTACCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 72 bp | GGCAGTGGTTCTGAATCTTGGGAGCTCCGGGTGTGGTaGCAGCCTCGGTGTCCCCATTGGGTTGGTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGSESWELRVW*QPRCPHWVGSQ Trigger: CTGTGAACCAACCCAATGGGGACACCGAGGCTGTCACCACACCCGGAGCTCCCAAGATTCAGAACCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | AGCGGAGAGCAAGATCGTCCCACACCACATAGACGCTaGCGCTGTCTCCCTGGCAGACACTGTTCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGEQDRPTPHRR*RCLPGRHCSPA Trigger: TGCAGGTGAACAGTGTCTGCCAGGGAGACAGCGGCAGCGTCTATGTGGTGTGGGACGATCTTGCTCTCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | GTGGTGACTGCTGGGCCAAAAGCACAGAGGCCTGTGTaGGGCAAGTATGGAGGATTCCCCAAAGGAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VVTAGPKAQRPV*GKYGGFPKGAT Trigger: GGTGGCTCCTTTGGGGAATCCTCCATACTTGCCCCACACAGGCCTCTGTGCTTTTGGCCCAGCAGTCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | CTTGGGAGCTCCGGGTGTGGTGACAGCCTCGGTGTCCCCATTGGGTaGGTTCACAGCTACAGCTTGGTAGAGAGCCAGGAAACCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSSGCGDSLGVPIG*VHSYSLVESQETFV Trigger: CACAAAGGTTTCCTGGCTCTCTACCAAGCTGTAGCTGTGAACCAACCCAATGGGGACACCGAGGCTGTCACCACACCCGGAGCTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | CCTTCACAGTCTGGGGATGGCTCCAGATCAAAGTCCTaGAAGGTCAGCCTCACAGCAAACCCCTCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSQSGDGSRSKS*KVSLTANPSGA Trigger: GGCTCCAGAGGGGTTTGCTGTGAGGCTGACCTTCCAGGACTTTGATCTGGAGCCATCCCCAGACTGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | GGAGGATTCCCCAAAGGAGCCACCAGCACATCTTGCTCATGCAGCTaGTGGTGGGAGAACTCCATAGGCTGTTCTCCAGCTCTGGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: GGFPKGATSTSCSCS*WWENSIGCSPALGP Trigger: TGGTCCCAGAGCTGGAGAACAGCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAATCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | GCAAACCCCTCTGGAGCCTCGATGTCAGTGTGGCTCTCCTGGCCTTaGAGATATGGCTCTGGGTATCCAGGGGATGTCAGTTGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ANPSGASMSVWLSWP*RYGSGYPGDVSCCG Trigger: ACCACAGCAACTGACATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGAGGGGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | GTGGAGGTGTGTGATTTTGCTCTTGGAGGACGAGTGTaGCTGGAAGGTCAGCCGCAGGCTCCTACCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VEVCDFALGGRV*LEGQPQAPTRR Trigger: TCTTCTGGTAGGAGCCTGCGGCTGACCTTCCAGGCACACTCGTCCTCCAAGAGCAAAATCACACACCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | GGAGCCACCAGCACATCTTGCTCATGCAGCTTGTGGTaGGAGAACTCCATAGGCTGTTCTCCAGCTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GATSTSCSCSLW*ENSIGCSPALG Trigger: TCCCAGAGCTGGAGAACAGCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | AAAGTCCTGGAAGGTCAGCCTCACAGCAAACCCCTCTaGAGCCTCGATGTCAGTGTGGCTCTCCTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KVLEGQPHSKPL*SLDVSVALLAF Trigger: AAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGAGGGGTTTGCTGTGAGGCTGACCTTCCAGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | GTTCTCAGCAAGGGGGACGACTGGTCTTCCACAGACTaGCACGCATTCAGGAACCTCTCCTCCATCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLSKGDDWSSTD*HAFRNLSSILS Trigger: AGACAGGATGGAGGAGAGGTTCCTGAATGCGTGCCAGTCTGTGGAAGACCAGTCGTCCCCCTTGCTGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | GCCAGGAAACCTTTGTGGAGGTGTGTGATTTTGCTCTaGGAGGACGAGTGTGCCTGGAAGGTCAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARKPLWRCVILL*EDECAWKVSRR Trigger: CCTGCGGCTGACCTTCCAGGCACACTCGTCCTCCAAGAGCAAAATCACACACCTCCACAAAGGTTTCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 72 bp | TTGTTGTTAACCAGCCCATCTCCACACCAAACCCACTaGCGTAACCCCACAGGCCGCTGTGGTAGAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLTSPSPHQTH*RNPTGRCGRGS Trigger: AGACCCTCTACCACAGCGGCCTGTGGGGTTACGTCAGTGGGTTTGGTGTGGAGATGGGCTGGTTAACAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | TTGAGATATGGCTCTGGGTATCCAGGGGATGTCAGTTaGTGTGGTGACTGCTGGGCCAAAAGCACAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRYGSGYPGDVS*CGDCWAKSTEA Trigger: GGCCTCTGTGCTTTTGGCCCAGCAGTCACCACAGCAACTGACATCCCCTGGATACCCAGAGCCATATCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | TCTGGAGCCTCGATGTCAGTGTGGCTCTCCTGGCCTTaGAGATATGGCTCTGGGTATCCAGGGGATGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGASMSVWLSWP*RYGSGYPGDVS Trigger: ACTGACATCCCCTGGATACCCAGAGCCATATCTCAAAGGCCAGGAGAGCCACACTGACATCGAGGCTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | TATGGAGGATTCCCCAAAGGAGCCACCAGCACATCTTaGTCATGCAGCTTGTGGTGGGAGAACTCCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YGGFPKGATSTS*SCSLWWENSIG Trigger: GCCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAATCCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | CAGACTGGGAGGAGATTGGGCCCCAGAGGGACTCTCTaGTCAAGTTCCAGGAGAGCAATATCTCCATTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QTGRRLGPRGTL*SSSRRAISPLK Trigger: CTTCAATGGAGATATTGCTCTCCTGGAACTTGAGCAGAGAGTCCCTCTGGGGCCCAATCTCCTCCCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | ACACAGAACATATTGTCAGAAAACACCTCAGTTCGCTaGCTCTGGTGGAGCCAGGCTTCACAGGCCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TQNILSENTSVR*LWWSQASQASL Trigger: CAGGGAGGCCTGTGAAGCCTGGCTCCACCAGAGGCAGCGAACTGAGGTGTTTTCTGACAATATGTTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | AGGTGTGTGATTTTGCTCTTGGAGGACGAGTGTGCCTaGAAGGTCAGCCGCAGGCTCCTACCAGAAGATACA | + |
|
Preference number: 6 (lower is better) Translates to: RCVILLLEDECA*KVSRRLLPEDT Trigger: TGTATCTTCTGGTAGGAGCCTGCGGCTGACCTTCCAGGCACACTCGTCCTCCAAGAGCAAAATCACACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | TCCTCCATCCTGTCTGTCCTTCCACTTCCACGAGGATaGGCAGCTAAGTGTCCCTGTCTGGTCTGCCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: SSILSVLPLPRG*AAKCPCLVCLI Trigger: TATAAGGCAGACCAGACAGGGACACTTAGCTGCCCATCCTCGTGGAAGTGGAAGGACAGACAGGATGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | ACCAAAAGTGTTTGGGTTCTCAGCAAGGGGGACGACTaGTCTTCCACAGACTGGCACGCATTCAGGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKSVWVLSKGDD*SSTDWHAFRNL Trigger: GAGGTTCCTGAATGCGTGCCAGTCTGTGGAAGACCAGTCGTCCCCCTTGCTGAGAACCCAAACACTTTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | GTATGGAGGATTCCCCAAAGGAGCCACCAGCACATCTaGCTCATGCAGCTTGTGGTGGGAGAACTCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: VWRIPQRSHQHI*LMQLVVGELHR Trigger: CCTATGGAGTTCTCCCACCACAAGCTGCATGAGCAAGATGTGCTGGTGGCTCCTTTGGGGAATCCTCCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | CTCGGTGTCCCCATTGGGTTGGTTCACAGCTACAGCTaGGTAGAGAGCCAGGAAACCTTTGTGGAGGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGVPIGLVHSYS*VESQETFVEVC Trigger: ACACACCTCCACAAAGGTTTCCTGGCTCTCTACCAAGCTGTAGCTGTGAACCAACCCAATGGGGACACCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | GGTGACAGCCTCGGTGTCCCCATTGGGTTGGTTCACAGCTACAGCTaGGTAGAGAGCCAGGAAACCTTTGTGGAGGTGTGTGATTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDSLGVPIGLVHSYS*VESQETFVEVCDFA Trigger: AGCAAAATCACACACCTCCACAAAGGTTTCCTGGCTCTCTACCAAGCTGTAGCTGTGAACCAACCCAATGGGGACACCGAGGCTGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | TGGGCAGCTAAGTGTCCCTGTCTGGTCTGCCTTATAATAAGGATCTaGGCAGTGGTTCTGAATCTTGGGAGCTCCGGGTGTGGTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: WAAKCPCLVCLIIRI*AVVLNLGSSGCGDS Trigger: GCTGTCACCACACCCGGAGCTCCCAAGATTCAGAACCACTGCCAAGATCCTTATTATAAGGCAGACCAGACAGGGACACTTAGCTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CCA 72 bp | GTTGCCCAGTTTAGCTCGGGAAGAACCAAAAGTGTTTaGGTTCTCAGCAAGGGGGACGACTGGTCTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VAQFSSGRTKSV*VLSKGDDWSST Trigger: TGTGGAAGACCAGTCGTCCCCCTTGCTGAGAACCCAAACACTTTTGGTTCTTCCCGAGCTAAACTGGGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 90 bp | TGGCAGACACTGTTCACCTGCATCTCTTCCCCAACACAGAACATATaGTCAGAAAACACCTCAGTTCGCTGCCTCTGGTGGAGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WQTLFTCISSPTQNI*SENTSVRCLWWSQA Trigger: AGCCTGGCTCCACCAGAGGCAGCGAACTGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGAAGAGATGCAGGTGAACAGTGTCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS GCA 72 bp | CCACGAGGATGGGCAGCTAAGTGTCCCTGTCTGGTCTaGCTTATAATAAGGATCTTGGCAGTGGTTCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PRGWAAKCPCLV*LIIRILAVVLN Trigger: ATTCAGAACCACTGCCAAGATCCTTATTATAAGGCAGACCAGACAGGGACACTTAGCTGCCCATCCTCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | AAGTGTCCCTGTCTGGTCTGCCTTATAATAAGGATCTaGGCAGTGGTTCTGAATCTTGGGAGCTCCGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: KCPCLVCLIIRI*AVVLNLGSSGC Trigger: ACACCCGGAGCTCCCAAGATTCAGAACCACTGCCAAGATCCTTATTATAAGGCAGACCAGACAGGGACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS CAA 72 bp | CTGTTCACCTGCATCTCTTCCCCAACACAGAACATATaGTCAGAAAACACCTCAGTTCGCTGCCTCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFTCISSPTQNI*SENTSVRCLWW Trigger: CCACCAGAGGCAGCGAACTGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGAAGAGATGCAGGTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 72 bp | TGGTTCCCGAGTTTCAGTAGCTCGTCTATGTCTGTGTaGCCCAGAAACACTTCCACATTCTGGTTCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WFPSFSSSSMSV*PRNTSTFWFLL Trigger: CAGAAGGAACCAGAATGTGGAAGTGTTTCTGGGTCACACAGACATAGACGAGCTACTGAAACTCGGGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||
| CDS TCA 72 bp | TGTGACCCAGAAACACTTCCACATTCTGGTTCCTTCTaGGATAGATGCTATCCTTGGGGTAGATGGTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CDPETLPHSGSF*DRCYPWGRWYG Trigger: CCCATACCATCTACCCCAAGGATAGCATCTATCTCAGAAGGAACCAGAATGTGGAAGTGTTTCTGGGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049124.10 |
||