Pregenerated sensors for C1QTNF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061535Ensembl transcript IDs: ENSMUST00000076939.10, ENSMUST00000121872.3, ENSMUST00000144558.3
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATTGGACAAGGTGGGCACTTCATATACACAGGCTGTGTGATCATTaGGTCACCTCTGATGATGGCAGTGCCTCACTTTGGGACCCATTC | + |
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Preference number: 1 (lower is better) Translates to: HWTRWALHIHRLCDH*VTSDDGSASLWDPF Trigger: GAATGGGTCCCAAAGTGAGGCACTGCCATCATCAGAGGTGACGCAATGATCACACAGCCTGTGTATATGAAGTGCCCACCTTGTCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR TCA 90 bp | AAATGGCTGAAGGAAGTGAGAGGCTTGGAAGGTAGTAGTTTGCCCTaGTATTCAGGTTCCTCCCTGTTCATCTTCACTCCAGCTTACTCA | + |
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Preference number: 1 (lower is better) Translates to: KWLKEVRGLEGSSLP*YSGSSLFIFTPAYS Trigger: TGAGTAAGCTGGAGTGAAGATGAACAGGGAGGAACCTGAATATCAGGGCAAACTACTACCTTCCAAGCCTCTCACTTCCTTCAGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 90 bp | CCATTACTGCAGACCACAGCAGTGATACTTAAGACAGAATCATGGTaGCTGAGATTAAATAGGGAATCACAGTGGGCAGCTGATGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PLLQTTAVILKTESW*LRLNRESQWAADAN Trigger: GTTGGCATCAGCTGCCCACTGTGATTCCCTATTTAATCTCAGCCACCATGATTCTGTCTTAAGTATCACTGCTGTGGTCTGCAGTAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 90 bp | ATGCCATTACTGCAGACCACAGCAGTGATACTTAAGACAGAATCATaGTGGCTGAGATTAAATAGGGAATCACAGTGGGCAGCTGATGCC | + |
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Preference number: 1 (lower is better) Translates to: MPLLQTTAVILKTES*WLRLNRESQWAADA Trigger: GGCATCAGCTGCCCACTGTGATTCCCTATTTAATCTCAGCCACCATGATTCTGTCTTAAGTATCACTGCTGTGGTCTGCAGTAATGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 90 bp | TTTTCTTTTTCAGAGCATTGGGACTTGTGTATAGGTGTGTGGGCATaGATATCATTTCTTGTCTTCTTAGGAGTCGGATGGCTTAGACCA | + |
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Preference number: 1 (lower is better) Translates to: FSFSEHWDLCIGVWA*ISFLVFLGVGWLRP Trigger: TGGTCTAAGCCATCCGACTCCTAAGAAGACAAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 90 bp | GGTGTGTGGGCATGCATATCATTTCTTGTCTTCTTAGGAGTCGGATaGCTTAGACCAGACTACATTCATCTTGGTTTTCCTTCTTTATCA | + |
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Preference number: 1 (lower is better) Translates to: GVWACISFLVFLGVG*LRPDYIHLGFPSLS Trigger: TGATAAAGAAGGAAAACCAAGATGAATGTAGTCTGGTCTAAGCCATCCGACTCCTAAGAAGACAAGAAATGATATGCATGCCCACACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 90 bp | TTAGCATTTTCTTTTTCAGAGCATTGGGACTTGTGTATAGGTGTGTaGGCATGCATATCATTTCTTGTCTTCTTAGGAGTCGGATGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LAFSFSEHWDLCIGV*ACISFLVFLGVGWL Trigger: AAGCCATCCGACTCCTAAGAAGACAAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 90 bp | CAAATGGCCTATATTTTATTGTGTATTTCTGTTGGCTGCTTGCTATaGTTTGTAGCCTGGAATTCTAGCAGTGGCTGTTATCTAGAGATA | + |
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Preference number: 1 (lower is better) Translates to: QMAYILLCISVGCLL*FVAWNSSSGCYLEI Trigger: TATCTCTAGATAACAGCCACTGCTAGAATTCCAGGCTACAAAGCATAGCAAGCAGCCAACAGAAATACACAATAAAATATAGGCCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 90 bp | ATTTTATTGTGTATTTCTGTTGGCTGCTTGCTATGCTTTGTAGCCTaGAATTCTAGCAGTGGCTGTTATCTAGAGATAAGTGAATATCTC | + |
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Preference number: 1 (lower is better) Translates to: ILLCISVGCLLCFVA*NSSSGCYLEISEYL Trigger: GAGATATTCACTTATCTCTAGATAACAGCCACTGCTAGAATTCCAGGCTACAAAGCATAGCAAGCAGCCAACAGAAATACACAATAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGATCCCCAGCACCACGAACCTGGGCATAGACGTGCATGCCTGTAATCCCAATAGGGAATCACAGTaGGCAGCTGATGCCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VLIPSTTNLGIDVHACNPNRESQ*AADANS Trigger: AGAGTTGGCATCAGCTGCCCACTGTGATTCCCTATT...GGGATTACAGGCATGCACGTCTATGCCCAGGTTCGTGGTGCTGGGGATCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGATCCCCAGCACCACGAACCTGGGCATAGACGTGCATGCCTGTAATCCCGCTCAAAGAACAAGATaGATGGCATCTGAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLIPSTTNLGIDVHACNPAQRTR*MASEER Trigger: TCTCTCCTCAGATGCCATCCATCTTGTTCTTTGAGC...GGGATTACAGGCATGCACGTCTATGCCCAGGTTCGTGGTGCTGGGGATCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR TCA 90 bp | AACAATCTTGTGGGTCAAGACAGTCTTCATAGTTTCTTTAGGAAATTCACCTGGTGCGGACGGCTGGGGTaGCAGCACAGTCCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: NNLVGQDSLHSFFRKFTWCGRLG*QHSPEC Trigger: ACACTCTGGACTGTGCTGTCACCCCAGCCGTCCGCA...CCAGGTGAATTTCCTAAAGAAACTATGAAGACTGTCTTGACCCACAAGATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR GCA 90 bp | GCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTTTGGCTTCCAACCCCAGGCAGTGTGGTACTCATGTTTaGAACATTCAGGCCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: ACLVLFLCEKSLASNPRQCGTHV*NIQACS Trigger: ACTACAGGCCTGAATGTTGCAAACATGAGTACCACA...CTGCCTGGGGTTGGAAGCCAAAGATTTCTCACAGAGAAAAAGCACTAAGCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CAA 90 bp | TGTTCATCTTCACTCCAGCTTACTCATGGATCTGGGACATGTGCTTaGCTGCATTCTAGCTCTGGGAAATTTGTGAGAAATGTTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: CSSSLQLTHGSGTCA*LHSSSGKFVRNVFP Trigger: GGGGAAAACATTTCTCACAAATTTCCCAGAGCTAGAATGCAGCAAAGCACATGTCCCAGATCCATGAGTAAGCTGGAGTGAAGATGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGCACTTCATATACACAGGCTGTGTGATCATTGCGTCACCTCTGATGATCTTAAGACAGAATCATaGTGGCTGAGATTAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: RWALHIHRLCDHCVTSDDLKTES*WLRLNR Trigger: CCTATTTAATCTCAGCCACCATGATTCTGTCTTAAG...ATCATCAGAGGTGACGCAATGATCACACAGCCTGTGTATATGAAGTGCCCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR TCA 90 bp | CATAGAAACACTTGTACTTTGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTCTGAGGAGAGACAGCTaGTGTCTTCTGGTGTACACA | + |
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Preference number: 2 (lower is better) Translates to: HRNTCTLACLVLFLCEKSLRRDS*CLLVYT Trigger: TGTGTACACCAGAAGACATCAGCTGTCTCTCCTCAG...AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTGTAATCCCAATACTTGTTCAGTAGAGAATCAAGAACTCAACCTTATCGCTTACTCATGGATCTaGGACATGTGCTTTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: HACNPNTCSVENQELNLIAYSWI*DMCFAA Trigger: TGCAGCAAAGCACATGTCCCAGATCCATGAGTAAGC...GATAAGGTTGAGTTCTTGATTCTCTACTGAACAAGTATTGGGATTACAGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CAA 90 bp | TCACTCTCCTGGGACTTAGCATTTTCTTTTTCAGAGCATTGGGACTaGTGTATAGGTGTGTGGGCATGCATATCATTTCTTGTCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SLSWDLAFSFSEHWD*CIGVWACISFLVFL Trigger: TAAGAAGACAAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAAGTCCCAGGAGAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CAA 90 bp | AATACAGTCACTCTCCTGGGACTTAGCATTTTCTTTTTCAGAGCATaGGGACTTGTGTATAGGTGTGTGGGCATGCATATCATTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTVTLLGLSIFFFRA*GLVYRCVGMHIISC Trigger: ACAAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAAGTCCCAGGAGAGTGACTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTGTAATCCCAATACTTGTTCAGTAGAGAATCAAGAACTCAACCTTATCGTTGGCTGCTTGCTATaGTTTGTAGCCTGGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: HACNPNTCSVENQELNLIVGCLL*FVAWNS Trigger: AGAATTCCAGGCTACAAAGCATAGCAAGCAGCCAAC...GATAAGGTTGAGTTCTTGATTCTCTACTGAACAAGTATTGGGATTACAGGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CAA 90 bp | GATTTTGCAATGAAGAATCATTTACAAGATGTTGACAAAATGCCTTaGTTAGGATGGGACTGTGACTCAGCTGGTAGATTGTTAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: DFAMKNHLQDVDKMP*LGWDCDSAGRLLAW Trigger: CCAGGCTAACAATCTACCAGCTGAGTCACAGTCCCATCCTAACAAAGGCATTTTGTCAACATCTTGTAAATGATTCTTCATTGCAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | CATAGAAACACTTGTACTTTGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTCCATCTTTCTCTGTCTaGTTCAGCACTCAATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HRNTCTLACLVLFLCEKSPSFSV*FSTQCL Trigger: CAGACATTGAGTGCTGAACCAGACAGAGAAAGATGG...AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTGTGGTACTCATGTTTaGAACATTCAGGCCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: FASIFRIITLGGPCLRLLCGTHV*NIQACS Trigger: ACTACAGGCCTGAATGTTGCAAACATGAGTACCACA...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| 3UTR CAA 90 bp | AGAAACATATTTGTGTTAGAAAACTATTTTGCTCCAATCACCACCTaGAGTTCCTTTCTCAGGCTTCCCTCTTTCTGTCTTTCATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RNIFVLENYFAPITT*SSFLRLPSFCLSFL Trigger: AAGGAATGAAAGACAGAAAGAGGGAAGCCTGAGAAAGGAACTCAAGGTGGTGATTGGAGCAAAATAGTTTTCTAACACAAATATGTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR GCA 90 bp | GAATCAAGAACTCAACCTTATCTTCAGCTATTTAACAAGGCCTTGCTCAAAATTTGTATTTCTGTTGGCTaGTTGCTATGCTTTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ESRTQPYLQLFNKALLKICISVG*LLCFVA Trigger: GGCTACAAAGCATAGCAAGCAGCCAACAGAAATACA...AATTTTGAGCAAGGCCTTGTTAAATAGCTGAAGATAAGGTTGAGTTCTTGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CCA 90 bp | AACAATCTTGTGGGTCAAGACAGTCTTCATAGTTTCTTTAGGAAATTCACCTGGTTGTGTATAGGTGTGTaGGCATGCATATCATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NNLVGQDSLHSFFRKFTWLCIGV*ACISFL Trigger: AAGAAATGATATGCATGCCCACACACCTATACACAA...CCAGGTGAATTTCCTAAAGAAACTATGAAGACTGTCTTGACCCACAAGATTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR TCA 72 bp | TCCGGGCTCACTAGTCAGCCAGGCTACCCAGATCAGTaGGCTCCGGGTTCAGTGAACTCTCTGGCTCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SGLTSQPGYPDQ*APGSVNSLAQR Trigger: TCTTTGAGCCAGAGAGTTCACTGAACCCGGAGCTCACTGATCTGGGTAGCCTGGCTGACTAGTGAGCCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 72 bp | AGGTGGGCACTTCATATACACAGGCTGTGTGATCATTaGGTCACCTCTGATGATGGCAGTGCCTCACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: RWALHIHRLCDH*VTSDDGSASLW Trigger: CCAAAGTGAGGCACTGCCATCATCAGAGGTGACGCAATGATCACACAGCCTGTGTATATGAAGTGCCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | CCGGGTTCAGTGAACTCTCTGGCTCAAAGAACAAGATaGATGGCATCTGAGGAGAGACAGCTGATGTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PGSVNSLAQRTR*MASEERQLMSS Trigger: AGAAGACATCAGCTGTCTCTCCTCAGATGCCATCCATCTTGTTCTTTGAGCCAGAGAGTTCACTGAACCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR TCA 72 bp | GAACTCTCTGGCTCAAAGAACAAGATGGATGGCATCTaGGGAGAGACAGCTGATGTCTTCTGGTGTACACAC | + |
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Preference number: 3 (lower is better) Translates to: ELSGSKNKMDGI*GETADVFWCTH Trigger: GTGTGTACACCAGAAGACATCAGCTGTCTCTCCTCAGATGCCATCCATCTTGTTCTTTGAGCCAGAGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR TCA 72 bp | AAAGAACAAGATGGATGGCATCTGAGGAGAGACAGCTaGTGTCTTCTGGTGTACACACACACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: KEQDGWHLRRDS*CLLVYTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTACACCAGAAGACATCAGCTGTCTCTCCTCAGATGCCATCCATCTTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 72 bp | TCAGAGCATTGGGACTTGTGTATAGGTGTGTGGGCATaGATATCATTTCTTGTCTTCTTAGGAGTCGGATGG | + |
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Preference number: 3 (lower is better) Translates to: SEHWDLCIGVWA*ISFLVFLGVGW Trigger: CCATCCGACTCCTAAGAAGACAAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | CTGCAGACCACAGCAGTGATACTTAAGACAGAATCATaGTGGCTGAGATTAAATAGGGAATCACAGTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LQTTAVILKTES*WLRLNRESQWA Trigger: TGCCCACTGTGATTCCCTATTTAATCTCAGCCACCATGATTCTGTCTTAAGTATCACTGCTGTGGTCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | CTATACAAAATAAGGCTACTGCCATCTTTCTCTGTCTaGTTCAGCACTCAATGTCTGCTCCACACAGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LYKIRLLPSFSV*FSTQCLLHTVS Trigger: TGAGACTGTGTGGAGCAGACATTGAGTGCTGAACCAGACAGAGAAAGATGGCAGTAGCCTTATTTTGTATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | CTCTCCTGGGACTTAGCATTTTCTTTTTCAGAGCATTaGGACTTGTGTATAGGTGTGTGGGCATGCATATCA | + |
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Preference number: 3 (lower is better) Translates to: LSWDLAFSFSEH*DLCIGVWACIS Trigger: TGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAAGTCCCAGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | TTCAGCAGGCAGAATACAGTAATACATTGGACAAGGTaGGCACTTCATATACACAGGCTGTGTGATCATTGC | + |
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Preference number: 3 (lower is better) Translates to: FSRQNTVIHWTR*ALHIHRLCDHC Trigger: GCAATGATCACACAGCCTGTGTATATGAAGTGCCCACCTTGTCCAATGTATTACTGTATTCTGCCTGCTGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | CATTTACAAGATGTTGACAAAATGCCTTTGTTAGGATaGGACTGTGACTCAGCTGGTAGATTGTTAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: HLQDVDKMPLLG*DCDSAGRLLAW Trigger: CCAGGCTAACAATCTACCAGCTGAGTCACAGTCCCATCCTAACAAAGGCATTTTGTCAACATCTTGTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CAA 90 bp | GAATCAAGAACTCAACCTTATCTTCAGCTATTTAACAAGGCCTTGCTCAAAATTCTCTGTGAGAAATCTTaGGCTTCCAACCCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ESRTQPYLQLFNKALLKILCEKS*ASNPRQ Trigger: CTGCCTGGGGTTGGAAGCCAAAGATTTCTCACAGAG...AATTTTGAGCAAGGCCTTGTTAAATAGCTGAAGATAAGGTTGAGTTCTTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | GCATGCATATCATTTCTTGTCTTCTTAGGAGTCGGATaGCTTAGACCAGACTACATTCATCTTGGTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ACISFLVFLGVG*LRPDYIHLGFP Trigger: AGGAAAACCAAGATGAATGTAGTCTGGTCTAAGCCATCCGACTCCTAAGAAGACAAGAAATGATATGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR CCA 72 bp | TGTATTTCTGTTGGCTGCTTGCTATGCTTTGTAGCCTaGAATTCTAGCAGTGGCTGTTATCTAGAGATAAGT | + |
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Preference number: 3 (lower is better) Translates to: CISVGCLLCFVA*NSSSGCYLEIS Trigger: ACTTATCTCTAGATAACAGCCACTGCTAGAATTCCAGGCTACAAAGCATAGCAAGCAGCCAACAGAAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CAA 90 bp | GAATCAAGAACTCAACCTTATCTTCAGCTATTTAACAAGGCCTTGCTCAAAATTGCTCCAATCACCACCTaGAGTTCCTTTCTCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ESRTQPYLQLFNKALLKIAPITT*SSFLRL Trigger: AAGCCTGAGAAAGGAACTCAAGGTGGTGATTGGAGC...AATTTTGAGCAAGGCCTTGTTAAATAGCTGAAGATAAGGTTGAGTTCTTGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 72 bp | AACTGTTGGACCCATAGAAACACTTGTACTTTGGCATaGTTAGTGCTTTTTCTCTGTGAGAAATCTTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: NCWTHRNTCTLA*LVLFLCEKSLA Trigger: AGCCAAAGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATGGGTCCAACAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CAA 90 bp | CATAGAAACACTTGTACTTTGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTGTGGTTTGTCTTATTTaGATAACTCAGCCAGAGTCG | + |
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Preference number: 3 (lower is better) Translates to: HRNTCTLACLVLFLCEKSVVCLI*ITQPES Trigger: CGACTCTGGCTGAGTTATCAAAATAAGACAAACCAC...AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGGTTGTATTGCCAAGGGCATTCAAATTTGTTAACATCATTTGCTTTAATGTGGTTTGTCTTATTTaGATAACTCAGCCAGAGTCG | + |
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Preference number: 3 (lower is better) Translates to: QLVVLPRAFKFVNIICFNVVCLI*ITQPES Trigger: CGACTCTGGCTGAGTTATCAAAATAAGACAAACCAC...ATTAAAGCAAATGATGTTAACAAATTTGAATGCCCTTGGCAATACAACCAGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCCTGTAATCCCAATACTTGTTCAGTAGAGAATCAAGAACTCAACCTTATCCAGCTAGTTGGTGGTTaGTCTTATTTTGATAACTCA | + |
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Preference number: 3 (lower is better) Translates to: HACNPNTCSVENQELNLIQLVGG*SYFDNS Trigger: TGAGTTATCAAAATAAGACAAACCACCAACTAGCTG...GATAAGGTTGAGTTCTTGATTCTCTACTGAACAAGTATTGGGATTACAGGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR-3UTR CAA 90 bp | AACAATCTTGTGGGTCAAGACAGTCTTCATAGTTTCTTTAGGAAATTCACCTGGCAGACTACATTCATCTaGGTTTTCCTTCTTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: NNLVGQDSLHSFFRKFTWQTTFI*VFLLYH Trigger: GTGATAAAGAAGGAAAACCAAGATGAATGTAGTCTG...CCAGGTGAATTTCCTAAAGAAACTATGAAGACTGTCTTGACCCACAAGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| 3UTR GCA 72 bp | TATATTTTATTGTGTATTTCTGTTGGCTGCTTGCTATaGTTTGTAGCCTGGAATTCTAGCAGTGGCTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: YILLCISVGCLL*FVAWNSSSGCY Trigger: ATAACAGCCACTGCTAGAATTCCAGGCTACAAAGCATAGCAAGCAGCCAACAGAAATACACAATAAAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| CDS-3UTR CCA 90 bp | TCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCCCAGGAGGCCCAGCTaGACCGACTTCTCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STFQHSRLECQPLWYSCLPRRPS*TDFSFL Trigger: GAGAAAGGAGAAGTCGGTCCAGCTGGGCCTCCTGGG...CAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | TCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGGTCCTTATCCGGTACTaGCCATTGTGCACCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: STFQHSRLECQPLWYSCLVLIRY*PLCTSP Trigger: CGGGCTGGTGCACAATGGGCAGTACCGGATAAGGAC...CAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATTCCTCTGTCTCCCTTTaGCCCAGGAGGCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQHSRLECQPLWYSCLQHSSVSL*PRRPSW Trigger: CCAGCTGGGCCTCCTGGGCCAAAGGGAGACAGAGGA...ATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATTCAGGCCTCAATGCTTCCACACCTaGACACTCCAGGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQIRVSATVVLMFATFRPQCFHT*TLQAAL Trigger: CAGGGCTGCCTGGAGTGTGCAGGTGTGGAAGCATTG...AGGCCTGAATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCCATGGTTCCCTGTGTTaGCATCAAAGGTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLHLPALQIRVSATVVLHGSLC*HQRSLS Trigger: GGATAAGGACCTTTGATGCCAACACAGGGAACCATG...GAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGAGCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | TCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGAGCCCGATTGCTAGGTaGTTATTGGCCAACGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: STFQHSRLECQPLWYSCLSPIAR*LLANVM Trigger: CATCACGTTGGCCAATAAGCACCTAGCAATCGGGCT...CAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATCTGGGTAGCTGGTTGTaGTGCCAACTGAAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQHSRLECQPLWYSCLQHLGSWL*CQLKRQ Trigger: CTGCCTTTTCAGTTGGCATCACAACCAGCTACCCAG...ATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | TCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGGAGAAGAGGCCGTTCTaGTCATTGAAGAAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STFQHSRLECQPLWYSCLEKRPF*SLKKIS Trigger: GGAGATCTTCTTCAATGACCAGAACGGCCTCTTCTC...CAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | CCAGAGTGTGTGCTTTGTAAGCATGAGGACCTGAGCTaGATCCTTCAGAACCCATATGAATACAAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PECVLCKHEDLS*ILQNPYEYKAG Trigger: GCCTGCCTTGTATTCATATGGGTTCTGAAGGATCAAGCTCAGGTCCTCATGCTTACAAAGCACACACTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGCACTTCATATACACAGGCTGTGTGATCATTGCGTCACCTCTGATGATGTAATCCAGGGATGCTaGAGATGTACCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWALHIHRLCDHCVTSDDVIQGC*RCTLES Trigger: ACTCTCCAAGGTACATCTGCAGCATCCCTGGATTAC...ATCATCAGAGGTGACGCAATGATCACACAGCCTGTGTATATGAAGTGCCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATGGTTGTGATGCCAACTaGAAAGGCAGATTTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQHSRLECQPLWYSCLQHGCDAN*KGRFEH Trigger: GTGCTCAAATCTGCCTTTTCAGTTGGCATCACAACC...ATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | CATAGAAACACTTGTACTTTGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTCCCAGGAGGCCCAGCTaGACCGACTTCTCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRNTCTLACLVLFLCEKSPRRPS*TDFSFL Trigger: GAGAAAGGAGAAGTCGGTCCAGCTGGGCCTCCTGGG...AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATGCCATTCGTTTTGTTGTGCCGAGGTTGTCCACTTaGACAGATGGCAAGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLGGPCLRLLYAIRFVVPRLST*TDGKTR Trigger: ACGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGG...CACAACAAAACGAATGGCATACAATAACCTCAGACATGGACCCCCTAAAGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | GCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATCAATGCTTCCACACCTaGACACTCCAGGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASIFRIITLGGPCLRLLYQCFHT*TLQAAL Trigger: CAGGGCTGCCTGGAGTGTGCAGGTGTGGAAGCATTG...ATACAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACAGAGTTATTGGAACATGTATAAGCATAAAAGAGTCCTTATCCGGTACTaGCCATTGTGCACCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTQSYWNMYKHKRVLIRY*PLCTSP Trigger: CGGGCTGGTGCACAATGGGCAGTACCGGATAAGGAC...TCTTTTATGCTTATACATGTTCCAATAACTCTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGAGGCCAATGCGACCATaGGGTCCAGGGGAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FASIFRIITLGGPCLRLLRPMRP*GPGEPF Trigger: AAATGGCTCCCCTGGACCCCATGGTCGCATTGGCCT...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | TTTTATGAATATTTAATGAGGCAGTGTCATTTCCAGCTGGTTGTATTGCCAAGGAGGCCAATGCGACCATaGGGTCCAGGGGAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYEYLMRQCHFQLVVLPRRPMRP*GPGEPF Trigger: AAATGGCTCCCCTGGACCCCATGGTCGCATTGGCCT...CCTTGGCAATACAACCAGCTGGAAATGACACTGCCTCATTAAATATTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | GTAGACAGAGTTCAGCAGGCAGAATACAGTAATACATaGGACAAGGTGGGCACTTCATATACACAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDRVQQAEYSNT*DKVGTSYTQAV Trigger: CACAGCCTGTGTATATGAAGTGCCCACCTTGTCCAATGTATTACTGTATTCTGCCTGCTGAACTCTGTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATCAGCTCATCATCCTCTaGTATAGAATCCAGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: FQHSRLECQPLWYSCLQHQLIIL*YRIQVI Trigger: GATTACCTGGATTCTATATCAGAGGATGATGAGCTG...ATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | TCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGAAAGTAATAGATCCCTaGGAAAGCGCAAATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: STFQHSRLECQPLWYSCLKVIDP*ESANEL Trigger: AAGTTCATTTGCGCTTTCCCAGGGATCTATTACTTT...CAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATGCCATTCGTTTTGTTGTGCCAGACCTCATCTTCTaGCTGCAGGTAGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLGGPCLRLLYAIRFVVPDLIF*LQVDDC Trigger: ACAGTCATCTACCTGCAGCCAGAAGATGAGGTCTGG...CACAACAAAACGAATGGCATACAATAACCTCAGACATGGACCCCCTAAAGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | ACTCTCCTGGGACTTAGCATTTTCTTTTTCAGAGCATaGGGACTTGTGTATAGGTGTGTGGGCATGCATATC | + |
|
Preference number: 4 (lower is better) Translates to: TLLGLSIFFFRA*GLVYRCVGMHI Trigger: GATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAAGTCCCAGGAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | CATAGAAACACTTGTACTTTGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCTGGCCGTTCTGGTCATTaGAGAAGATCTCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRNTCTLACLVLFLCEKSGRSGH*RRSPAR Trigger: TCTGGCTGGAGATCTTCTTCAATGACCAGAACGGCC...AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGGGCCGTTCTGGTCATTaGAGAAGATCTCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FASIFRIITLGGPCLRLLGRSGH*RRSPAR Trigger: TCTGGCTGGAGATCTTCTTCAATGACCAGAACGGCC...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACAGAGTTATTGGAACATGTATAAGCATAAAAGACCGAGGTTGTCCACTTaGACAGATGGCAAGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTQSYWNMYKHKRPRLST*TDGKTR Trigger: ACGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGG...TCTTTTATGCTTATACATGTTCCAATAACTCTGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATGCCATTCGTTTTGTTGTGCCTTCTCTCCTTTTCTaGCATCTCTACCATCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITLGGPCLRLLYAIRFVVPSLLF*HLYHPF Trigger: GAAGGGATGGTAGAGATGGCAGAAAAGGAGAGAAGG...CACAACAAAACGAATGGCATACAATAACCTCAGACATGGACCCCCTAAAGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR TCA 90 bp | GAATCAAGAACTCAACCTTATCTTCAGCTATTTAACAAGGCCTTGCTCAAAATTCTGGGTAGCTGGTTGTaGTGCCAACTGAAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQPYLQLFNKALLKILGSWL*CQLKRQ Trigger: CTGCCTTTTCAGTTGGCATCACAACCAGCTACCCAG...AATTTTGAGCAAGGCCTTGTTAAATAGCTGAAGATAAGGTTGAGTTCTTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGAATGAACTTCCCCGTTaGAGGGTTGTAATGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FASIFRIITLGGPCLRLLNELPR*RVVMLP Trigger: GGGGAGCATTACAACCCTGCAACGGGGAAGTTCATT...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | TTTTATGAATATTTAATGAGGCAGTGTCATTTCCAGCTGGTTGTATTGCCAAGGAGCCCGATTGCTAGGTaGTTATTGGCCAACGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYEYLMRQCHFQLVVLPRSPIAR*LLANVM Trigger: CATCACGTTGGCCAATAAGCACCTAGCAATCGGGCT...CCTTGGCAATACAACCAGCTGGAAATGACACTGCCTCATTAAATATTCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | AACAATCTTGTGGGTCAAGACAGTCTTCATAGTTTCTTTAGGAAATTCACCTGGCATGGTTCCCTGTGTTaGCATCAAAGGTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: NNLVGQDSLHSFFRKFTWHGSLC*HQRSLS Trigger: GGATAAGGACCTTTGATGCCAACACAGGGAACCATG...CCAGGTGAATTTCCTAAAGAAACTATGAAGACTGTCTTGACCCACAAGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGCCAGACCTCATCTTCTaGCTGCAGGTAGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FASIFRIITLGGPCLRLLPDLIF*LQVDDC Trigger: ACAGTCATCTACCTGCAGCCAGAAGATGAGGTCTGG...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | CTCTGCAACTGTTGGACCCATAGAAACACTTGTACTTaGGCATGCTTAGTGCTTTTTCTCTGTGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LCNCWTHRNTCT*ACLVLFLCEKS Trigger: AGATTTCTCACAGAGAAAAAGCACTAAGCATGCCAAAGTACAAGTGTTTCTATGGGTCCAACAGTTGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACAGAGTTATTGGAACATGTATAAGCATAAAAGAGGTTGTGATGCCAACTaGAAAGGCAGATTTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTQSYWNMYKHKRGCDAN*KGRFEH Trigger: GTGCTCAAATCTGCCTTTTCAGTTGGCATCACAACC...TCTTTTATGCTTATACATGTTCCAATAACTCTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR GCA 90 bp | GCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATGTAATCCAGGGATGCTaGAGATGTACCTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASIFRIITLGGPCLRLLYVIQGC*RCTLES Trigger: ACTCTCCAAGGTACATCTGCAGCATCCCTGGATTAC...ATACAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTTGTATTGCCAAGGGCATTCAAATTTGTTAACATCATTTGCTTTAATAATGAACTTCCCCGTTaGAGGGTTGTAATGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLVVLPRAFKFVNIICFNNELPR*RVVMLP Trigger: GGGGAGCATTACAACCCTGCAACGGGGAAGTTCATT...ATTAAAGCAAATGATGTTAACAAATTTGAATGCCCTTGGCAATACAACCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACAGAGTTATTGGAACATGTATAAGCATAAAAGAGAGAAGAGGCCGTTCTaGTCATTGAAGAAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTQSYWNMYKHKREKRPF*SLKKIS Trigger: GGAGATCTTCTTCAATGACCAGAACGGCCTCTTCTC...TCTTTTATGCTTATACATGTTCCAATAACTCTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| 3UTR CAA 72 bp | AGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATaGTATGCCATTCGTTTTGTTGTGATTTCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RIITLGGPCLRL*YAIRFVVISAS Trigger: ACTAGCTGAAATCACAACAAAACGAATGGCATACAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | TGGGACTTAGCATTTTCTTTTTCAGAGCATTGGGACTaGTGTATAGGTGTGTGGGCATGCATATCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WDLAFSFSEHWD*CIGVWACISFL Trigger: AAGAAATGATATGCATGCCCACACACCTATACACAAGTCCCAATGCTCTGAAAAAGAAAATGCTAAGTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| 3UTR CAA 72 bp | ATGAAGAATCATTTACAAGATGTTGACAAAATGCCTTaGTTAGGATGGGACTGTGACTCAGCTGGTAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: MKNHLQDVDKMP*LGWDCDSAGRL Trigger: CAATCTACCAGCTGAGTCACAGTCCCATCCTAACAAAGGCATTTTGTCAACATCTTGTAAATGATTCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | AACAATCTTGTGGGTCAAGACAGTCTTCATAGTTTCTTTAGGAAATTCACCTGGGCTTATTGGCCAACGTaGTGTCATAAGAAAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNLVGQDSLHSFFRKFTWAYWPT*CHKKSN Trigger: ATTACTTTTCTTATGACATCACGTTGGCCAATAAGC...CCAGGTGAATTTCCTAAAGAAACTATGAAGACTGTCTTGACCCACAAGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGTTGTATTGCCAAGGGCATTCAAATTTGTTAACATCATTTGCTTTAATCAGCTCATCATCCTCTaGTATAGAATCCAGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLVVLPRAFKFVNIICFNQLIIL*YRIQVI Trigger: GATTACCTGGATTCTATATCAGAGGATGATGAGCTG...ATTAAAGCAAATGATGTTAACAAATTTGAATGCCCTTGGCAATACAACCAGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| 3UTR CAA 72 bp | TATTTAATGAGGCAGTGTCATTTCCAGCTGGTTGTATaGCCAAGGGCATTCAAATTTGTTAACATCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLMRQCHFQLVV*PRAFKFVNIIC Trigger: GCAAATGATGTTAACAAATTTGAATGCCCTTGGCAATACAACCAGCTGGAAATGACACTGCCTCATTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGAAAGTAATAGATCCCTaGGAAAGCGCAAATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FASIFRIITLGGPCLRLLKVIDP*ESANEL Trigger: AAGTTCATTTGCGCTTTCCCAGGGATCTATTACTTT...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGCTCCACCTTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCCCCGAGGTTGTCCACTaGCACAGATGGCAAGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLLHLPALQIRVSATVVLPEVVH*HRWQDS Trigger: CGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGGG...GAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAAGGTGGAGCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
||
| CDS TCA 90 bp | ATAGAGGAGAAACCCAGAGAACAAGCTGTCTGCCCAGCCTGGATCTaGGAAGAGGCCGTTCTGGTCATTGAAGAAGATCTCCAGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IEEKPREQAVCPAWI*EEAVLVIEEDLQPD Trigger: GTCTGGCTGGAGATCTTCTTCAATGACCAGAACGGCCTCTTCTCAGATCCAGGCTGGGCAGACAGCTTGTTCTCTGGGTTTCTCCTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS GCA 90 bp | AGAGTAGCTCTCTCCCTTAGCCTGATTGGCCCGAGGTTGTCCACTTaGACAGATGGCAAGACTCGTCACGTAGAGCAGGACAATCATCTT | + |
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Preference number: 5 (lower is better) Translates to: RVALSLSLIGPRLST*TDGKTRHVEQDNHL Trigger: AAGATGATTGTCCTGCTCTACGTGACGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGGGCCAATCAGGCTAAGGGAGAGAGCTACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| CDS-3UTR CAA 90 bp | TTCCAGCACTCCAGATTAGAGTGTCAGCCACTGTGGTACTCATGTTTGCAACATCCCGAGGTTGTCCACTaGCACAGATGGCAAGACTCG | + |
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Preference number: 5 (lower is better) Translates to: FQHSRLECQPLWYSCLQHPEVVH*HRWQDS Trigger: CGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGGG...ATGTTGCAAACATGAGTACCACAGTGGCTGACACTCTAATCTGGAGTGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS-3UTR CAA 90 bp | TTTGCTTCAATATTTAGGATCATTACTTTAGGGGGTCCATGTCTGAGGTTATTGGTCCAGGGGAGCCATTaGCTCCAGGAGGACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: FASIFRIITLGGPCLRLLVQGSH*LQEDLG Trigger: CCCCAGGTCCTCCTGGAGCAAATGGCTCCCCTGGAC...CAATAACCTCAGACATGGACCCCCTAAAGTAATGATCCTAAATATTGAAGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS-3UTR CAA 90 bp | TTTTATGAATATTTAATGAGGCAGTGTCATTTCCAGCTGGTTGTATTGCCAAGGGTCCAGGGGAGCCATTaGCTCCAGGAGGACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: FYEYLMRQCHFQLVVLPRVQGSH*LQEDLG Trigger: CCCCAGGTCCTCCTGGAGCAAATGGCTCCCCTGGAC...CCTTGGCAATACAACCAGCTGGAAATGACACTGCCTCATTAAATATTCATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS-3UTR CAA 90 bp | ATTACTTTAGGGGGTCCATGTCTGAGGTTATTGTATGCCATTCGTTTTGTTGTGAGGCCGTTCTGGTCATaGAAGAAGATCTCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ITLGGPCLRLLYAIRFVVRPFWS*KKISSQ Trigger: CTGGCTGGAGATCTTCTTCAATGACCAGAACGGCCT...CACAACAAAACGAATGGCATACAATAACCTCAGACATGGACCCCCTAAAGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS-3UTR CAA 90 bp | GAATCAAGAACTCAACCTTATCTTCAGCTATTTAACAAGGCCTTGCTCAAAATTAGGCCGTTCTGGTCATaGAAGAAGATCTCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ESRTQPYLQLFNKALLKIRPFWS*KKISSQ Trigger: CTGGCTGGAGATCTTCTTCAATGACCAGAACGGCCT...AATTTTGAGCAAGGCCTTGTTAAATAGCTGAAGATAAGGTTGAGTTCTTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076939.10 |
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| CDS-3UTR CAA 90 bp | CAGCTGGTTGTATTGCCAAGGGCATTCAAATTTGTTAACATCATTTGCTTTAATTCATGGTTCCCTGTGTaGGCATCAAAGGTCCTTATC | + |
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Preference number: 5 (lower is better) Translates to: QLVVLPRAFKFVNIICFNSWFPV*ASKVLI Trigger: GATAAGGACCTTTGATGCCAACACAGGGAACCATGA...ATTAAAGCAAATGATGTTAACAAATTTGAATGCCCTTGGCAATACAACCAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS CCA 72 bp | TCTCTACCATCCCTTCCAGGAAGGCCAATGCGACCATaGGGTCCAGGGGAGCCATTTGCTCCAGGAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: SLPSLPGRPMRP*GPGEPFAPGGP Trigger: AGGTCCTCCTGGAGCAAATGGCTCCCCTGGACCCCATGGTCGCATTGGCCTTCCTGGAAGGGATGGTAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 ENSMUST00000144558.3 |
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| CDS CCA 72 bp | ATCTCCTCTGTCTCCCTTTGGCCCAGGAGGCCCAGCTaGACCGACTTCTCCTTTCTCACCCTCTGGTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: ISSVSLWPRRPS*TDFSFLTLWSY Trigger: ATAGGACCAGAGGGTGAGAAAGGAGAAGTCGGTCCAGCTGGGCCTCCTGGGCCAAAGGGAGACAGAGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS GCA 72 bp | CTCTCCCTTAGCCTGATTGGCCCGAGGTTGTCCACTTaGACAGATGGCAAGACTCGTCACGTAGAGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LSLSLIGPRLST*TDGKTRHVEQD Trigger: GTCCTGCTCTACGTGACGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGGGCCAATCAGGCTAAGGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 ENSMUST00000144558.3 |
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| CDS CCA 72 bp | AGGCCCAGCTGGACCGACTTCTCCTTTCTCACCCTCTaGTCCTATGGGTCCTTTCTTTCCAGTTTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPSWTDFSFLTL*SYGSFLSSFSL Trigger: CAAGGAGAAACTGGAAAGAAAGGACCCATAGGACCAGAGGGTGAGAAAGGAGAAGTCGGTCCAGCTGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS CAA 72 bp | AGAGTAGCTCTCTCCCTTAGCCTGATTGGCCCGAGGTaGTCCACTTGCACAGATGGCAAGACTCGTCACGTA | + |
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Preference number: 6 (lower is better) Translates to: RVALSLSLIGPR*STCTDGKTRHV Trigger: TACGTGACGAGTCTTGCCATCTGTGCAAGTGGACAACCTCGGGCCAATCAGGCTAAGGGAGAGAGCTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 ENSMUST00000144558.3 |
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| CDS CAA 72 bp | GTGTTGGCATCAAAGGTCCTTATCCGGTACTGCCCATaGTGCACCAGCCCGATTGCTAGGTGCTTATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VLASKVLIRYCP*CTSPIARCLLA Trigger: GGCCAATAAGCACCTAGCAATCGGGCTGGTGCACAATGGGCAGTACCGGATAAGGACCTTTGATGCCAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS GCA 72 bp | TTGGCATCAAAGGTCCTTATCCGGTACTGCCCATTGTaGACCAGCCCGATTGCTAGGTGCTTATTGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LASKVLIRYCPL*TSPIARCLLAN Trigger: GTTGGCCAATAAGCACCTAGCAATCGGGCTGGTGCACAATGGGCAGTACCGGATAAGGACCTTTGATGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS TCA 72 bp | AAACCCAGAGAACAAGCTGTCTGCCCAGCCTGGATCTaGGAAGAGGCCGTTCTGGTCATTGAAGAAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: KPREQAVCPAWI*EEAVLVIEEDL Trigger: GAGATCTTCTTCAATGACCAGAACGGCCTCTTCTCAGATCCAGGCTGGGCAGACAGCTTGTTCTCTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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| CDS GCA 72 bp | ATAGATCCCTGGGAAAGCGCAAATGAACTTCCCCGTTaGAGGGTTGTAATGCTCCCCCTCATTGAAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: IDPWESANELPR*RVVMLPLIEED Trigger: GTCCTCTTCAATGAGGGGGAGCATTACAACCCTGCAACGGGGAAGTTCATTTGCGCTTTCCCAGGGATCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076939.10 ENSMUST00000121872.3 |
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