Pregenerated sensors for C1QTNF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022440Ensembl transcript IDs: ENSMUST00000023075.9, ENSMUST00000229185.2, ENSMUST00000230943.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGTaGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: MDGGHLPLRSLGRLQ*ERGRLEGHQATHPG Trigger: CCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR GCA 90 bp | CTGTGGAGACAAGGAATGGAGAGCAGCAGACCCAGCCCTAGGACCTaGCCTAGCCACCAGCTGCCCAGCTGTGAAAGTGGCGGGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LWRQGMESSRPSPRT*PSHQLPSCESGGEG Trigger: TCCCTCCCCGCCACTTTCACAGCTGGGCAGCTGGTGGCTAGGGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR TCA 90 bp | ACGTGTCCACGTCATCACTGTAGATGCCGTTTTCCCGCTCCCGCTTaGAGAGCCGCACCCACACACGGTCACCCGGCACCAGTGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TCPRHHCRCRFPAPA*RAAPTHGHPAPVAA Trigger: TGCTGCCACTGGTGCCGGGTGACCGTGTGTGGGTGCGGCTCTTCAAGCGGGAGCGGGAAAACGGCATCTACAGTGATGACGTGGACACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR TCA 90 bp | GCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCCACCTTCCCCTaGGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ALDLQKHQWTEATFP*EAWAGYSGRGEGWR Trigger: CCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR GCA 90 bp | CCTCTGTTACCCTGCCATGGCTCGCTTGGTTGTAAGCACCAGAGATaGCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAA | + |
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Preference number: 1 (lower is better) Translates to: PLLPCHGSLGCKHQR*PLRASPALDLQKHQ Trigger: TTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGGCATCTCTGGTGCTTACAACCAAGCGAGCCATGGCAGGGTAACAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CCA 90 bp | AGGAGAGGGATGGAGACAGACTGCAGTAACTGTGGAGACAAGGAATaGAGAGCAGCAGACCCAGCCCTAGGACCTGCCCTAGCCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: RRGMETDCSNCGDKE*RAADPALGPALATS Trigger: GCTGGTGGCTAGGGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACAGTTACTGCAGTCTGTCTCCATCCCTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CCA 90 bp | GAGGGCCAGAGAGCACTAGTGCATGGTCTGACCATGGCTAATGTCTaGGGGAAAGAAGGGGGCAGGAGGAGTCTTCTAACATCAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: EGQRALVHGLTMANV*GKEGGRRSLLTSGK Trigger: CTTCCCTGATGTTAGAAGACTCCTCCTGCCCCCTTCTTTCCCCCAGACATTAGCCATGGTCAGACCATGCACTAGTGCTCTCTGGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CCA 90 bp | CCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATaGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAA | + |
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Preference number: 1 (lower is better) Translates to: PTMSARAIQAGEALK*EPPPGGQGLKHLHK Trigger: TTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR GCA 90 bp | AAGTATCAGAAAAACGAAGCTAAGAGGAGAGGGATGGAGACAGACTaGAGTAACTGTGGAGACAAGGAATGGAGAGCAGCAGACCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: KYQKNEAKRRGMETD*SNCGDKEWRAADPA Trigger: GGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACAGTTACTGCAGTCTGTCTCCATCCCTCTCCTCTTAGCTTCGTTTTTCTGATACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CCA 90 bp | CACAACTCCTCAAGTGTGATCCACAGACCTGTAGCGTCAATGTCATaGAGGAAATCACTAGAAATGAAGAATCCTGGGTCTACCCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: HNSSSVIHRPVASMS*RKSLEMKNPGSTPN Trigger: ATTTGGGGTAGACCCAGGATTCTTCATTTCTAGTGATTTCCTCCATGACATTGACGCTACAGGTCTGTGGATCACACTTGAGGAGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CCA 90 bp | TGTAGCGTCAATGTCATGGAGGAAATCACTAGAAATGAAGAATCCTaGGTCTACCCCAAATGCAAAGCCAGCATCTACCAGATAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: CSVNVMEEITRNEES*VYPKCKASIYQIIK Trigger: CTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGGGTAGACCCAGGATTCTTCATTTCTAGTGATTTCCTCCATGACATTGACGCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGGGCCTTGGAGGAGCCAGGAGGGCCAGAGAGCACTAGTGCATGGTCTGCCAGCTGCCCAGCTGTaGAAGTGGCGGGGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EPGPWRSQEGQRALVHGLPAAQL*KWRGGR Trigger: CCTCCCTCCCCGCCACTTTCACAGCTGGGCAGCTGG...CAGACCATGCACTAGTGCTCTCTGGCCCTCCTGGCTCCTCCAAGGCCCAGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGGGCCTTGGAGGAGCCAGGAGGGCCAGAGAGCACTAGTGCATGGTCTGCCTGTCTTGGCAGCATaGCTCAGAGAAGGCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: EPGPWRSQEGQRALVHGLPVLAA*LREGPQ Trigger: CTGGGGGCCTTCTCTGAGCCATGCTGCCAAGACAGG...CAGACCATGCACTAGTGCTCTCTGGCCCTCCTGGCTCCTCCAAGGCCCAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CAA 90 bp | CTTCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTaGGAGGGCCACCAGGCTACACACCCTGGGAAAGACGTGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LPLRSLGRLQWERGR*EGHQATHPGKDVEV Trigger: GACCTCCACGTCTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR CAA 90 bp | ACAGCACATGGCGGGCCTTGCCTCTGTTACCCTGCCATGGCTCGCTaGGTTGTAAGCACCAGAGATGCCCTCTCAGGGCCAGCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: TAHGGPCLCYPAMAR*VVSTRDALSGPALP Trigger: AGGCAGGGCTGGCCCTGAGAGGGCATCTCTGGTGCTTACAACCAAGCGAGCCATGGCAGGGTAACAGAGGCAAGGCCCGCCATGTGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCTTGGGCAGGCTACAGTaGGAGAGGGGAAGGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSQGQPCLGSAEAPMDGGLGRLQ*ERGRLE Trigger: CTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAA...GCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGCACTCTGGCTCTGCATaGTGCTGCGTTCGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: YSGRGEGWRATRLHTLGKHSGSA*CCVRWA Trigger: AGCCCAGCGAACGCAGCATCATGCAGAGCCAGAGTG...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGCTGCGTTCGCTGGGCTaGGCGTACAGGATCACCACT | + |
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Preference number: 2 (lower is better) Translates to: YSGRGEGWRATRLHTLGKLRSLG*AYRITT Trigger: AGTGGTGATCCTGTACGCGCAGCCCAGCGAACGCAG...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCACCATGGCTAATGTCTaGGGGAAAGAAGGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSQGQPCLGSAEAPMDGGTMANV*GKEGGR Trigger: CCTGCCCCCTTCTTTCCCCCAGACATTAGCCATGGT...GCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGACGTGGAGGTCTTCCCCAGGGCCTGTCTTaGCAGCATGGCTCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GKVGGPPGYTPWERRGGLPQGLS*QHGSEK Trigger: CTTCTCTGAGCCATGCTGCCAAGACAGGCCCTGGGG...AAGACCTCCACGTCTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTAGGGGAGCAATTCCAGAGTGTTCCTGAAGTCCCTAGAATGCTGGGAACACCAGCTGCCCAGCTGTaGAAGTGGCGGGGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GVGEQFQSVPEVPRMLGTPAAQL*KWRGGR Trigger: CCTCCCTCCCCGCCACTTTCACAGCTGGGCAGCTGG...TGTTCCCAGCATTCTAGGGACTTCAGGAACACTCTGGAATTGCTCCCCTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGTTCATAAACCCAGGGTaGGCCTGGGCCTTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YSGRGEGWRATRLHTLGKFINPG*AWALEE Trigger: CTCCTCCAAGGCCCAGGCTCACCCTGGGTTTATGAA...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTAAGGCAGGAGAAGCTCTaGAATGGGAGCCACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AEAPMDGGHLPLRSLGRLRQEKL*NGSHLQ Trigger: CTGGAGGTGGCTCCCATTTCAGAGCTTCTCCTGCCT...TAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAGGGCCACTTGCCCACGATGTCTaGAAGGGCAATACAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPEKLGQATVGEGKVGGPLAHDV*KGNTGR Trigger: CCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAG...TGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGGGAGAAGCTCTGAAATaGGAGCCACCTCCAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: EAPMDGGHLPLRSLGRLQGEALK*EPPPGG Trigger: TCCCCCTGGAGGTGGCTCCCATTTCAGAGCTTCTCC...CTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTAGGGGAGCCACAAAGCTaGCAGTGGCCATGTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: AEAPMDGGHLPLRSLGRLGEPQS*QWPCQS Trigger: ACTTTGACATGGCCACTGGCAGCTTTGTGGCTCCCC...TAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGTCCCTAGACCTGCTTTaGGCTGAAACCTGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: EAPMDGGHLPLRSLGRLQSLDLL*AETCHL Trigger: GAGGTGGCAGGTTTCAGCCCAAAGCAGGTCTAGGGA...CTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCACCTCTGTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGCTTGCCCACGATGTCTaGAAGGGCAATACAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PATSVLPDLPTMSARAIQLAHDV*KGNTGR Trigger: CCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAG...CTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAATGGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAACCCCTGCCACCTCTGTCCTaGCTGACTTGCCCACGATGT | + |
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Preference number: 2 (lower is better) Translates to: LKWEPPPGGQGLKHLHKPLPPLS*LTCPRC Trigger: ACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAG...GGGTTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAACCCAGGGGAGAAGCTCTGAAATaGGAGCCACCTCCAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: KWEPPPGGQGLKHLHKPRGEALK*EPPPGG Trigger: TCCCCCTGGAGGTGGCTCCCATTTCAGAGCTTCTCC...CCTGGGTTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGTCTACCCCAAATaGAAAGCCAGCATCTACCAG | + |
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Preference number: 2 (lower is better) Translates to: EAPMDGGHLPLRSLGRLQWVYPK*KASIYQ Trigger: CTGGTAGATGCTGGCTTTGCATTTGGGGTAGACCCA...CTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGACGTGGAGGTCTTTGGGTCTACCCCAAATaGAAAGCCAGCATCTACCAG | + |
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Preference number: 2 (lower is better) Translates to: GKVGGPPGYTPWERRGGLWVYPK*KASIYQ Trigger: CTGGTAGATGCTGGCTTTGCATTTGGGGTAGACCCA...AAGACCTCCACGTCTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCAGGAGGGCCAGAGAGCACTAGTGCATGGTCTGACCATGGCTAATGTCTGTGGAGACAAGGAATaGAGAGCAGCAGACCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RSQEGQRALVHGLTMANVCGDKE*RAADPA Trigger: GGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACA...GACATTAGCCATGGTCAGACCATGCACTAGTGCTCTCTGGCCCTCCTGGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAATACAGGCAGGAGAAGCTCTGAAATGGGAGCCACCTCCAGGGGGACAGGGACCTGTCAGACCATaGAAGCAGTGGAGAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RAIQAGEALKWEPPPGGQGPVRP*KQWRRN Trigger: GTTCCTTCTCCACTGCTTCCATGGTCTGACAGGTCC...CTGTCCCCCTGGAGGTGGCTCCCATTTCAGAGCTTCTCCTGCCTGTATTGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCACCTCTGTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGGGGATGGAGACAGACTaGAGTAACTGTGGAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PATSVLPDLPTMSARAIQGMETD*SNCGDK Trigger: CTTGTCTCCACAGTTACTGCAGTCTGTCTCCATCCC...CTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAGGGCCACTGAAGTCCCTAGAATaGTGGGAACACTTTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPEKLGQATVGEGKVGGPLKSLE*WEHFRE Trigger: CTCTCTAAAGTGTTCCCAGCATTCTAGGGACTTCAG...TGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAACCCAGGAGGATCACCACTGCCTaGTCATTGTGCACGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: KWEPPPGGQGLKHLHKPRRITTA*SLCTMC Trigger: GCACATCGTGCACAATGAGCAGGCAGTGGTGATCCT...CCTGGGTTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGCTAAGAGGAGAGGGATaGAGACAGACTGCAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: EAPMDGGHLPLRSLGRLQLRGEG*RQTAVT Trigger: AGTTACTGCAGTCTGTCTCCATCCCTCTCCTCTTAG...CTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAGGGCCATATTTGCTTTATTGCTaGGCACAGGGCAAGAACGTG | + |
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Preference number: 2 (lower is better) Translates to: SPEKLGQATVGEGKVGGPYLLYC*AQGKNV Trigger: CACGTTCTTGCCCTGTGCCCAGCAATAAAGCAAATA...TGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAACCCAGGCTTAGTACCCACTTCTaGGCTTTCCTAAGGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KWEPPPGGQGLKHLHKPRLSTHF*AFLRPE Trigger: CTCAGGCCTTAGGAAAGCCCAGAAGTGGGTACTAAG...CCTGGGTTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCACCTCTGTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGCTGAAGTCCCTAGAATaGTGGGAACACTTTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PATSVLPDLPTMSARAIQLKSLE*WEHFRE Trigger: CTCTCTAAAGTGTTCCCAGCATTCTAGGGACTTCAG...CTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCAGGAGGGCCAGAGAGCACTAGTGCATGGTCTGACCATGGCTAATGTCCTAAGAGGAGAGGGATaGAGACAGACTGCAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: RSQEGQRALVHGLTMANVLRGEG*RQTAVT Trigger: AGTTACTGCAGTCTGTCTCCATCCCTCTCCTCTTAG...GACATTAGCCATGGTCAGACCATGCACTAGTGCTCTCTGGCCCTCCTGGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAATGGAGAGCAGCAGACCCAGCCCTAGGACCTGCCCTAGCCACCAGCTGGTAGCGTCAATGTCATaGAGGAAATCACTAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: QGMESSRPSPRTCPSHQLVASMS*RKSLEM Trigger: CATTTCTAGTGATTTCCTCCATGACATTGACGCTAC...CAGCTGGTGGCTAGGGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTTGCACAAATGAACAATaGCTGGAAAAGGGGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLPDLPTMSARAIQAGEACTNEQ*LEKGRR Trigger: CCTCCTCCCCTTTTCCAGCCATTGTTCATTTGTGCA...AGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCCCAGGGATGAATAGAGTGGTGGAGTGTCAGGATAGCCACTCTAGAGGCGTACAGGATCACCACTaGCTGCTCATTGTGCACGAT | + |
|
Preference number: 2 (lower is better) Translates to: KTPGMNRVVECQDSHSRGVQDHH*LLIVHD Trigger: ATCGTGCACAATGAGCAGGCAGTGGTGATCCTGTAC...GCCTCTAGAGTGGCTATCCTGACACTCCACCACTCTATTCATCCCTGGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTAGTAGCGTCAATGTCATaGAGGAAATCACTAGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: AEAPMDGGHLPLRSLGRLVASMS*RKSLEM Trigger: CATTTCTAGTGATTTCCTCCATGACATTGACGCTAC...TAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCACCTCTGTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGAGAAATGAAGAATCCTaGGTCTACCCCAAATGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PATSVLPDLPTMSARAIQRNEES*VYPKCK Trigger: TTTGCATTTGGGGTAGACCCAGGATTCTTCATTTCT...CTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGTGCACAAATGAACAATaGCTGGAAAAGGGGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DLPTMSARAIQAGEALKWCTNEQ*LEKGRR Trigger: CCTCCTCCCCTTTTCCAGCCATTGTTCATTTGTGCA...CCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGATACATCTAAACTCCTaGGTCTCCTCCCAGCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DLPTMSARAIQAGEALKWIHLNS*VSSQLR Trigger: TCTTAGCTGGGAGGAGACCCAGGAGTTTAGATGTAT...CCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGAGAAATGAAGAATCCTaGGTCTACCCCAAATGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLPTMSARAIQAGEALKWRNEES*VYPKCK Trigger: TTTGCATTTGGGGTAGACCCAGGATTCTTCATTTCT...CCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAAACTCTATTTGCTTTATTGCTaGGCACAGGGCAAGAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: REQAPVPRCPFIPDTSKLYLLYC*AQGKNV Trigger: CACGTTCTTGCCCTGTGCCCAGCAATAAAGCAAATA...GAGTTTAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAATGCAAAGCCAGCATCTACCAGATAATAAAGACCCCAGGGATGAATAGACCACAAAGCTGCCAGTaGCCATGTCAAAGTGGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PKCKASIYQIIKTPGMNRPQSCQ*PCQSGH Trigger: ATGGCCACTTTGACATGGCCACTGGCAGCTTTGTGG...TCTATTCATCCCTGGGGTCTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
||
| 3UTR TCA 72 bp | CGTCATCACTGTAGATGCCGTTTTCCCGCTCCCGCTTaGAGAGCCGCACCCACACACGGTCACCCGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: RHHCRCRFPAPA*RAAPTHGHPAP Trigger: TGGTGCCGGGTGACCGTGTGTGGGTGCGGCTCTTCAAGCGGGAGCGGGAAAACGGCATCTACAGTGATGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
||
| 3UTR GCA 72 bp | CAAGGAATGGAGAGCAGCAGACCCAGCCCTAGGACCTaGCCTAGCCACCAGCTGCCCAGCTGTGAAAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGMESSRPSPRT*PSHQLPSCESG Trigger: GCCACTTTCACAGCTGGGCAGCTGGTGGCTAGGGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR GCA 72 bp | CCCTGCCATGGCTCGCTTGGTTGTAAGCACCAGAGATaGCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCHGSLGCKHQR*PLRASPALDLQ Trigger: CTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGGCATCTCTGGTGCTTACAACCAAGCGAGCCATGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | GAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTaGAGGGCCACCAGGCTACACACCCTGGGAAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: EAWAGYSGRGEG*RATRLHTLGKT Trigger: CGTCTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTTGGGCAGGCTACAGAGGGCCAGCCCTGCCTaGGATCTGCAGAAGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: EAPMDGGHLPLRSLGRLQRASPA*DLQKHQ Trigger: TTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCT...CTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGAGCCACCTCCAGGGGGACAGGGGCTTAAGCACCTTCATAAACCCAGGCCCCCAGGGCCTGTCTaGGCAGCATGGCTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KWEPPPGGQGLKHLHKPRPPGPV*AAWLRE Trigger: TTCTCTGAGCCATGCTGCCAAGACAGGCCCTGGGGG...CCTGGGTTTATGAAGGTGCTTAAGCCCCTGTCCCCCTGGAGGTGGCTCCCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR TCA 72 bp | CTGCTTTGGGCTGAAACCTGCCACCTCTGTCCTGCCTaGCTTGCCCACGATGTCTGCAAGGGCAATACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLWAETCHLCPA*LAHDVCKGNTG Trigger: GCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGGTTTCAGCCCAAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR TCA 72 bp | ATGTCACTGGCTTCAGTCCCTAGACCTGCTTTGGGCTaGAACCTGCCACCTCTGTCCTGCCTGACTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MSLASVPRPALG*NLPPLSCLTCP Trigger: TGGGCAAGTCAGGCAGGACAGAGGTGGCAGGTTTCAGCCCAAAGCAGGTCTAGGGACTGAAGCCAGTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | ATGGAGACAGACTGCAGTAACTGTGGAGACAAGGAATaGAGAGCAGCAGACCCAGCCCTAGGACCTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: METDCSNCGDKE*RAADPALGPAL Trigger: TAGGGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACAGTTACTGCAGTCTGTCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGAGAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAAATTTTCCCGCTCCCGCTaGAAGAGCCGCACCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: GREQAPVPRCPFIPDTSKFSRSR*KSRTHT Trigger: TGTGTGGGTGCGGCTCTTCAAGCGGGAGCGGGAAAA...TTTAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTCTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | AGAGCACTAGTGCATGGTCTGACCATGGCTAATGTCTaGGGGAAAGAAGGGGGCAGGAGGAGTCTTCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: RALVHGLTMANV*GKEGGRRSLLT Trigger: TGTTAGAAGACTCCTCCTGCCCCCTTCTTTCCCCCAGACATTAGCCATGGTCAGACCATGCACTAGTGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCCAGGAGGGCCAGAGAGCACTAGTGCATGGTCTGACCATGGCTAATGTCCCTATATTTGCTTTATaGCTGGGCACAGGGCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSQEGQRALVHGLTMANVPIFAL*LGTGQE Trigger: TTCTTGCCCTGTGCCCAGCAATAAAGCAAATATAGG...GACATTAGCCATGGTCAGACCATGCACTAGTGCTCTCTGGCCCTCCTGGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR GCA 72 bp | AAAAACGAAGCTAAGAGGAGAGGGATGGAGACAGACTaGAGTAACTGTGGAGACAAGGAATGGAGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KNEAKRRGMETD*SNCGDKEWRAA Trigger: TGCTGCTCTCCATTCCTTGTCTCCACAGTTACTGCAGTCTGTCTCCATCCCTCTCCTCTTAGCTTCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | AGAGTGGTGGAGTGTCAGGATAGCCACTCTAGAGGCTaGCAAAGTCTGAAATATGTAAGCCCCAAAGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: RVVECQDSHSRG*QSLKYVSPKVS Trigger: TGATACTTTGGGGCTTACATATTTCAGACTTTGCCAGCCTCTAGAGTGGCTATCCTGACACTCCACCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | CCAGATGCCCCTTCATCCCAGATACATCTAAACTCCTaGGTCTCCTCCCAGCTAAGATTATACCTATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PDAPSSQIHLNS*VSSQLRLYLYL Trigger: CAAATATAGGTATAATCTTAGCTGGGAGGAGACCCAGGAGTTTAGATGTATCTGGGATGAAGGGGCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | AATGTCATGGAGGAAATCACTAGAAATGAAGAATCCTaGGTCTACCCCAAATGCAAAGCCAGCATCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: NVMEEITRNEES*VYPKCKASIYQ Trigger: CTGGTAGATGCTGGCTTTGCATTTGGGGTAGACCCAGGATTCTTCATTTCTAGTGATTTCCTCCATGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CCA 72 bp | TCAAGTGTGATCCACAGACCTGTAGCGTCAATGTCATaGAGGAAATCACTAGAAATGAAGAATCCTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSVIHRPVASMS*RKSLEMKNPGS Trigger: AGACCCAGGATTCTTCATTTCTAGTGATTTCCTCCATGACATTGACGCTACAGGTCTGTGGATCACACTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| 3UTR GCA 72 bp | ATCACTAGAAATGAAGAATCCTGGGTCTACCCCAAATaGAAAGCCAGCATCTACCAGATAATAAAGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ITRNEESWVYPK*KASIYQIIKTP Trigger: TGGGGTCTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGGGTAGACCCAGGATTCTTCATTTCTAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS-3UTR TCA 90 bp | CCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCGCCCCTTGTCACCTTTaGCACCCTGAGAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQGQPCLGSAEAPMDGGAPCHL*HPESHG Trigger: ACCGTGGCTCTCAGGGTGTCAAAGGTGACAAGGGGC...GCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR GCA 90 bp | CCTAGGACCTGCCCTAGCCACCAGCTGCCCAGCTGTGAAAGTGGCGGGGAGGGAAGGAAGCAGGAATACTaGCCAGAGGAACCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRTCPSHQLPSCESGGEGRKQEY*PEEPQA Trigger: AGCCTGGGGTTCCTCTGGGCAGTATTCCTGCTTCCT...TCCCTCCCCGCCACTTTCACAGCTGGGCAGCTGGTGGCTAGGGCAGGTCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CAA 72 bp | GCACCAATGGACGGAGGCCACCTTCCCCTGAGAAGCTaGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APMDGGHLPLRS*GRLQWERGRLE Trigger: CTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGAAGGTGGCCTCCGTCCATTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| 3UTR CAA 72 bp | TTTCGTAGAGCCAGCCCTCACAGCACATGGCGGGCCTaGCCTCTGTTACCCTGCCATGGCTCGCTTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRRASPHSTWRA*PLLPCHGSLGC Trigger: ACAACCAAGCGAGCCATGGCAGGGTAACAGAGGCAAGGCCCGCCATGTGCTGTGAGGGCTGGCTCTACGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGGCCCACAGAGAAGGCTaGGTAATGTGTCTGGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: YSGRGEGWRATRLHTLGKAHREG*VMCLAR Trigger: TCGTGCCAGACACATTACTCAGCCTTCTCTGTGGGC...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACCTCTGTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGAAGTTCTCGCTGCTGTaGAAGCCAGTCTTGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PATSVLPDLPTMSARAIQKFSLL*KPVLRP Trigger: GGGCCGCAAGACTGGCTTGCACAGCAGCGAGAACTT...CTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCGTACAGGATCACCACTaGCTGCTCATTGTGCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQGQPCLGSAEAPMDGGVQDHH*LLIVHD Trigger: ATCGTGCACAATGAGCAGGCAGTGGTGATCCTGTAC...GCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCCTGACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGCGTTCGCTGGGCTaGGCGTACAGGATCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VLPDLPTMSARAIQAGEALRSLG*AYRITT Trigger: AGTGGTGATCCTGTACGCGCAGCCCAGCGAACGCAG...AGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCTCAGGGCCAGCCCTGCCTTGGATCTGCAGAAGCACCAATGGACGGAGGCGTGGCCATGTCAAAGTaGCCATCCGTGTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSQGQPCLGSAEAPMDGGVAMSK*PSVFTK Trigger: CTTTGTGAACACGGATGGCCACTTTGACATGGCCAC...GCCTCCGTCCATTGGTGCTTCTGCAGATCCAAGGCAGGGCTGGCCCTGAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGAGGATCACCACTGCCTaGTCATTGTGCACGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSGRGEGWRATRLHTLGKRITTA*SLCTMC Trigger: GCACATCGTGCACAATGAGCAGGCAGTGGTGATCCT...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | GCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGGAGCCAGGAAGCAGGAATACTaGCCAGAGGAACCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHDVCKGNTGRRSSEMGARKQEY*PEEPQA Trigger: AGCCTGGGGTTCCTCTGGGCAGTATTCCTGCTTCCT...GGCTCCCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGGAGCCGGGGAGCCACAAAGCTaGCAGTGGCCATGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHDVCKGNTGRRSSEMGAGEPQS*QWPCQS Trigger: ACTTTGACATGGCCACTGGCAGCTTTGTGGCTCCCC...GGCTCCCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| 3UTR CAA 72 bp | TTTGGGCTGAAACCTGCCACCTCTGTCCTGCCTGACTaGCCCACGATGTCTGCAAGGGCAATACAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGLKPATSVLPD*PTMSARAIQAG Trigger: TCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTCAGGCAGGACAGAGGTGGCAGGTTTCAGCCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGAAGGGGGCAGGAGGAGTCTTCTAACATCAGGGAAGAGAACAGGCTCCCCTGTCGAACAGCAGTaGGAGGAAGTTCTCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKEGGRRSLLTSGKRTGSPVEQQ*EEVLAA Trigger: AGCAGCGAGAACTTCCTCTCACTGCTGTTCGACAGG...GGAGCCTGTTCTCTTCCCTGATGTTAGAAGACTCCTCCTGCCCCCTTCTTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | GACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGCCAGGGCTACCTGCCTaGCCCTTGTCACCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: DLPTMSARAIQAGEALKWPGLPA*PLSPLT Trigger: TGTCAAAGGTGACAAGGGGCAGGCAGGTAGCCCTGG...CCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAAACTCCTGGGTCTCTGTGCAAGCCAGTCTTaGGGCCCACAGAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRCPFIPDTSKLLGLCASQS*GPQRRL Trigger: CAGCCTTCTCTGTGGGCCGCAAGACTGGCTTGCACA...GAGACCCAGGAGTTTAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGGAACACTTTAGAGAGAGCACAACTCCTCAAGTGTGATCCACAGACCTGTCACTCTGGCTCTGCATaGTGCTGCGTTCGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGNTLERAQLLKCDPQTCHSGSA*CCVRWA Trigger: AGCCCAGCGAACGCAGCATCATGCAGAGCCAGAGTG...ACAGGTCTGTGGATCACACTTGAGGAGTTGTGCTCTCTCTAAAGTGTTCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAAACTCCTGATCGTCGACAGCCTTTaGGGAGATGGGAGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EQAPVPRCPFIPDTSKLLIVDSL*GDGRPQ Trigger: CTGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGAT...CAGGAGTTTAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGAGAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTACTCGGGTACCATTCTTaGCTGGCTTCCCTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: REENRLQFPDAPSSQIHLLGYHS*LASLVF Trigger: GAACACCAGGGAAGCCAGGCAAGAATGGTACCCGAG...TAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTCTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
||
| CDS-3UTR CCA 90 bp | GACTTGCCCACGATGTCTGCAAGGGCAATACAGGCAGGAGAAGCTCTGAAATGGCCACAAAGCTGCCAGTaGCCATGTCAAAGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DLPTMSARAIQAGEALKWPQSCQ*PCQSGH Trigger: ATGGCCACTTTGACATGGCCACTGGCAGCTTTGTGG...CCATTTCAGAGCTTCTCCTGCCTGTATTGCCCTTGCAGACATCGTGGGCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CCA 90 bp | GGAAGAGAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAAACTTGCCTGGCTTCCCTaGTGTTCCTGTAGGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GREQAPVPRCPFIPDTSKLAWLP*CSCRTS Trigger: AGAGGTCCTACAGGAACACCAGGGAAGCCAGGCAAG...TTTAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGAACAGGCTCCAGTTCCCAGATGCCCCTTCATCCCAGATACATCTAGGTACCATTCTTGCCTaGCTTCCCTGGTGTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: REENRLQFPDAPSSQIHLGTILA*LPWCSC Trigger: ACAGGAACACCAGGGAAGCCAGGCAAGAATGGTACC...TAGATGTATCTGGGATGAAGGGGCATCTGGGAACTGGAGCCTGTTCTCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CCA 90 bp | CCCAAATGCAAAGCCAGCATCTACCAGATAATAAAGACCCCAGGGATGAATAGAATCGTCGACAGCCTTTaGGGAGATGGGAGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PKCKASIYQIIKTPGMNRIVDSL*GDGRPQ Trigger: CTGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGAT...TCTATTCATCCCTGGGGTCTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS-3UTR CCA 90 bp | TACCCCAAATGCAAAGCCAGCATCTACCAGATAATAAAGACCCCAGGGATGAATAGACCCTGGCTTCCCTaGTGTTCCTGTAGGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: YPKCKASIYQIIKTPGMNRPWLP*CSCRTS Trigger: AGAGGTCCTACAGGAACACCAGGGAAGCCAGGGTCT...ATTCATCCCTGGGGTCTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229185.2 |
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| 3UTR CAA 72 bp | CTCCTCCCAGCTAAGATTATACCTATATTTGCTTTATaGCTGGGCACAGGGCAAGAACGTGGAGCATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLPAKIIPIFAL*LGTGQERGAWE Trigger: TTCCCATGCTCCACGTTCTTGCCCTGTGCCCAGCAATAAAGCAAATATAGGTATAATCTTAGCTGGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS TCA 90 bp | GAGCTGCCAGGGCTACCTGCCTGCCCCTTGTCACCTTTGACACCCTaGGAGCCACGGTCCCCTCGGGTACCATTCTTGCCTGGCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: ELPGLPACPLSPLTP*EPRSPRVPFLPGFP Trigger: AGGGAAGCCAGGCAAGAATGGTACCCGAGGGGACCGTGGCTCTCAGGGTGTCAAAGGTGACAAGGGGCAGGCAGGTAGCCCTGGCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CAA 90 bp | TCCCCTGAGAAGCTTGGGCAGGCTACAGTGGGAGAGGGGAAGGTTGGAGGGCCATTTTCCCGCTCCCGCTaGAAGAGCCGCACCCACACA | + |
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Preference number: 5 (lower is better) Translates to: SPEKLGQATVGEGKVGGPFSRSR*KSRTHT Trigger: TGTGTGGGTGCGGCTCTTCAAGCGGGAGCGGGAAAA...TGGCCCTCCAACCTTCCCCTCTCCCACTGTAGCCTGCCCAAGCTTCTCAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CAA 90 bp | TACAGTGGGAGAGGGGAAGGTTGGAGGGCCACCAGGCTACACACCCTGGGAAAGCTGTGCAAGCCAGTCTaGCGGCCCACAGAGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: YSGRGEGWRATRLHTLGKLCKPV*RPTEKA Trigger: AGCCTTCTCTGTGGGCCGCAAGACTGGCTTGCACAG...CTTTCCCAGGGTGTGTAGCCTGGTGGCCCTCCAACCTTCCCCTCTCCCACTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS CCA 90 bp | TTTGACACCCTGAGAGCCACGGTCCCCTCGGGTACCATTCTTGCCTaGCTTCCCTGGTGTTCCTGTAGGACCTCTGTCCCCTTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: FDTLRATVPSGTILA*LPWCSCRTSVPFVT Trigger: GGTGACAAAGGGGACAGAGGTCCTACAGGAACACCAGGGAAGCCAGGCAAGAATGGTACCCGAGGGGACCGTGGCTCTCAGGGTGTCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CAA 90 bp | AGTAACTGTGGAGACAAGGAATGGAGAGCAGCAGACCCAGCCCTAGGACCTGCCCATCGTCGACAGCCTTaGGGGAGATGGGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SNCGDKEWRAADPALGPAHRRQP*GRWEAT Trigger: TGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGATG...GGCAGGTCCTAGGGCTGGGTCTGCTGCTCTCCATTCCTTGTCTCCACAGTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS-3UTR CAA 90 bp | AGGGCAATACAGGCAGGAGAAGCTCTGAAATGGGAGCCACCTCCAGGGGGACAGCCTCGGGTACCATTCTaGCCTGGCTTCCCTGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: RAIQAGEALKWEPPPGGQPRVPF*PGFPGV Trigger: AACACCAGGGAAGCCAGGCAAGAATGGTACCCGAGG...CTGTCCCCCTGGAGGTGGCTCCCATTTCAGAGCTTCTCCTGCCTGTATTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS GCA 90 bp | CGAACAGCAGTGAGAGGAAGTTCTCGCTGCTGTGCAAGCCAGTCTTaGGGCCCACAGAGAAGGCTGAGTAATGTGTCTGGCACGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RTAVRGSSRCCASQS*GPQRRLSNVSGTSC Trigger: GCAGCTCGTGCCAGACACATTACTCAGCCTTCTCTGTGGGCCGCAAGACTGGCTTGCACAGCAGCGAGAACTTCCTCTCACTGCTGTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS TCA 90 bp | GTCAAAGTGGCCATCCGTGTTCACAAAGACCCTGTCGAACAGCAGTaGGAGGAAGTTCTCGCTGCTGTGCAAGCCAGTCTTGCGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: VKVAIRVHKDPVEQQ*EEVLAAVQASLAAH Trigger: GTGGGCCGCAAGACTGGCTTGCACAGCAGCGAGAACTTCCTCTCACTGCTGTTCGACAGGGTCTTTGTGAACACGGATGGCCACTTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS-3UTR CAA 90 bp | AAGACCCCAGGGATGAATAGAGTGGTGGAGTGTCAGGATAGCCACTCTAGAGGCCATCGTCGACAGCCTTaGGGGAGATGGGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: KTPGMNRVVECQDSHSRGHRRQP*GRWEAT Trigger: TGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGATG...GCCTCTAGAGTGGCTATCCTGACACTCCACCACTCTATTCATCCCTGGGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGAACACTTTAGAGAGAGCACAACTCCTCAAGTGTGATCCACAGACCTGTGGACCTCTGTCCCCTTaGTCACCCTTTAGGATAGTA | + |
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Preference number: 5 (lower is better) Translates to: AGNTLERAQLLKCDPQTCGPLSP*SPFRIV Trigger: TACTATCCTAAAGGGTGACAAAGGGGACAGAGGTCC...ACAGGTCTGTGGATCACACTTGAGGAGTTGTGCTCTCTCTAAAGTGTTCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS-3UTR CAA 90 bp | CCCAAATGCAAAGCCAGCATCTACCAGATAATAAAGACCCCAGGGATGAATAGAGGACCTCTGTCCCCTTaGTCACCCTTTAGGATAGTA | + |
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Preference number: 5 (lower is better) Translates to: PKCKASIYQIIKTPGMNRGPLSP*SPFRIV Trigger: TACTATCCTAAAGGGTGACAAAGGGGACAGAGGTCC...TCTATTCATCCCTGGGGTCTTTATTATCTGGTAGATGCTGGCTTTGCATTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS CCA 72 bp | ACGGTCCCCTCGGGTACCATTCTTGCCTGGCTTCCCTaGTGTTCCTGTAGGACCTCTGTCCCCTTTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TVPSGTILAWLP*CSCRTSVPFVT Trigger: GGTGACAAAGGGGACAGAGGTCCTACAGGAACACCAGGGAAGCCAGGCAAGAATGGTACCCGAGGGGACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS GCA 72 bp | AGACCCTGTCGAACAGCAGTGAGAGGAAGTTCTCGCTaGTGTGCAAGCCAGTCTTGCGGCCCACAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RPCRTAVRGSSR*CASQSCGPQRR Trigger: CCTTCTCTGTGGGCCGCAAGACTGGCTTGCACAGCAGCGAGAACTTCCTCTCACTGCTGTTCGACAGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS CAA 90 bp | TCAGAGGACATCAGGTCCTCGGGGTCACAGCATCGTCGACAGCCTTaGGGGAGATGGGAGGCCACAGATTCTCCAAAGGTAGTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SEDIRSSGSQHRRQP*GRWEATDSPKVVSS Trigger: AGAGGAGACTACCTTTGGAGAATCTGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGATGCTGTGACCCCGAGGACCTGATGTCCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS CAA 72 bp | ATCAGGTCCTCGGGGTCACAGCATCGTCGACAGCCTTaGGGGAGATGGGAGGCCACAGATTCTCCAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: IRSSGSQHRRQP*GRWEATDSPKV Trigger: TACCTTTGGAGAATCTGTGGCCTCCCATCTCCCCAAAGGCTGTCGACGATGCTGTGACCCCGAGGACCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023075.9 ENSMUST00000229185.2 |
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| CDS TCA 72 bp | GCCATCCGTGTTCACAAAGACCCTGTCGAACAGCAGTaGGAGGAAGTTCTCGCTGCTGTGCAAGCCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: AIRVHKDPVEQQ*EEVLAAVQASL Trigger: AAGACTGGCTTGCACAGCAGCGAGAACTTCCTCTCACTGCTGTTCGACAGGGTCTTTGTGAACACGGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023075.9 |
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| CDS CAA 72 bp | CTCAGACACGAGGGCGTCCAGGCACATCAGGTAGACTaGAGACATGAAGTCCAGCTCTGGAGTAACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LRHEGVQAHQVD*RHEVQLWSNRQ Trigger: CTGTCTGTTACTCCAGAGCTGGACTTCATGTCTCAAGTCTACCTGATGTGCCTGGACGCCCTCGTGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230943.2 |
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