Pregenerated sensors for C1QTNF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079592Ensembl transcript IDs: ENSMUST00000114815.3, ENSMUST00000114816.8, ENSMUST00000114818.9, ENSMUST00000114821.9
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCTAAGTCATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATaGGCTGCGCGGGTTAGTGTCACACCCTCCACTGAGGAGCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: FLSHSQYSRGPALLV*AARVSVTPSTEEQV Trigger: CACTTGCTCCTCAGTGGAGGGTGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATGACTTAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR GCA 90 bp | ACTGCTCCACGCTGTCTTGACCTCAGACAGCCTGTCTCCATTCATTaGCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: TAPRCLDLRQPVSIH*QQWDWKWLPLFLSH Trigger: ATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGGCTGTCTGAGGTCAAGACAGCGTGGAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR CCA 90 bp | CTTGACCTCAGACAGCCTGTCTCCATTCATTGCCAGCAGTGGGACTaGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LDLRQPVSIHCQQWD*KWLPLFLSHSQYSR Trigger: CCTGGAATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGGCTGTCTGAGGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR CCA 90 bp | CGCTGTCTTGACCTCAGACAGCCTGTCTCCATTCATTGCCAGCAGTaGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATAT | + |
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Preference number: 1 (lower is better) Translates to: RCLDLRQPVSIHCQQ*DWKWLPLFLSHSQY Trigger: ATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGGCTGTCTGAGGTCAAGACAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | TATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACACCCCCACTGAGGAGCAAGTaGCAGCTCCGGGTTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: YSRGPALLVCAARVSVTPPLRSK*QLRVHC Trigger: ACAGTGAACCCGGAGCTGGCACTTGCTCCTCAGTGG...GGGTGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR CAA 90 bp | CAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCATCCCACCTaGGAGTCCTGGGCCAGGACCCACAGCTGCCAGCCTACTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: QGPRGDTGLGMEHPT*ESWARTHSCQPTAF Trigger: GAATGCAGTAGGCTGGCAGCTGTGGGTCCTGGCCCAGGACTCCAAGGTGGGATGCTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGCCACTGAGGAGCAAGTaGCAGCTCCGGGTTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: IHNIPGGQPSWYALRGLVPLRSK*QLRVHC Trigger: ACAGTGAACCCGGAGCTGGCACTTGCTCCTCAGTGG...CACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR CCA 90 bp | GGACCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCTGCCAGCAGTGGGACTaGAAGTGGCTCCCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GPTAASLLHSKVLGRNPACQQWD*KWLPLF Trigger: GAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCA...GGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCCCACTGAGGAGCAAGTaGCAGCTCCGGGTTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: AYCILKSWAETQPLLHAVPLRSK*QLRVHC Trigger: ACAGTGAACCCGGAGCTGGCACTTGCTCCTCAGTGG...GACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGTGCCAGCAGTGGGACTaGAAGTGGCTCCCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQQRWSQGPRGDTGLGMECQQWD*KWLPLF Trigger: GAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCA...CTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCCTGTCTCCATTCATTaGCAGCAGTGGGACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EQQRWSQGPRGDTGLGMEPVSIH*QQWDWK Trigger: CTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGG...CTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCATCCCCAGCTGCCAGCCTACTaGATTCTAAAGTCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRWSQGPRGDTGLGMEHPQLPAY*ILKSWA Trigger: TGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTG...GGGATGCTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCAGCTGCCAGCCTACTaGATTCTAAAGTCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: EQQRWSQGPRGDTGLGMEQLPAY*ILKSWA Trigger: TGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTG...CTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTATTCATTGCCAGCAGTaGGACTGGAAGTGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PTAASLLHSKVLGRNPATIHCQQ*DWKWLP Trigger: AGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAAT...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR CAA 90 bp | ATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTaGACCTCAGACAGCCTGTCTCCATTCATTGCCAGCAGTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: ILKSWAETQPLLHAV*TSDSLSPFIASSGT Trigger: AGTCCCACTGCTGGCAATGAATGGAGACAGGCTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACATTCATTGCCAGCAGTaGGACTGGAAGTGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHSKVLGRNPATAPRCLDIHCQQ*DWKWLP Trigger: AGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAAT...GTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATCCACTGAGGAGCAAGTaGCAGCTCCGGGTTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: CQQWDWKWLPLFLSHSQYPLRSK*QLRVHC Trigger: ACAGTGAACCCGGAGCTGGCACTTGCTCCTCAGTGG...ATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR GCA 72 bp | CATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATaGGCTGCGCGGGTTAGTGTCACACCCTCCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: HSQYSRGPALLV*AARVSVTPSTE Trigger: CTCAGTGGAGGGTGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| 3UTR GCA 72 bp | CGCTGTCTTGACCTCAGACAGCCTGTCTCCATTCATTaGCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RCLDLRQPVSIH*QQWDWKWLPLF Trigger: GAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGGCTGTCTGAGGTCAAGACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | TGCGCTGCGCGGGTTAGTGTCACACCCTCCACTGAGGAGCAAGTGCCAGCTCCGTACCATCGCACCCCCTaGGAGCGAGGCTGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CAARVSVTPSTEEQVPAPYHRTP*ERGWLG Trigger: CCCAAGCCAGCCTCGCTCTCAGGGGGTGCGATGGTA...CGGAGCTGGCACTTGCTCCTCAGTGGAGGGTGTGACACTAACCCGCGCAGCGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | CAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACACATGGTGACCTGGTGTaGCTGGAAGGCCGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QYSRGPALLVCAARVSVTHGDLV*LEGRAA Trigger: GGCAGCCCGGCCTTCCAGGCACACCAGGTCACCATG...TGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | CAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACACAGGCAGGCCTTGGCTaGCATGGTGACCTGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QYSRGPALLVCAARVSVTQAGLG*HGDLVC Trigger: GCACACCAGGTCACCATGGCAGCCAAGGCCTGCCTG...TGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | GGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCAGACAGCCTGTCTCCCAGGCAGGCCTTGGCTaGCATGGTGACCTGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GRNPATAPRCLDLRQPVSQAGLG*HGDLVC Trigger: GCACACCAGGTCACCATGGCAGCCAAGGCCTGCCTG...GGAGACAGGCTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTTACCATCGCACCCCCTaGGAGCGAGGCTGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATYHRTP*ERGWLG Trigger: CCCAAGCCAGCCTCGCTCTCAGGGGGTGCGATGGTA...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | ATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACCCACGCCCACCTaGACCCACACCTGGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IHNIPGGQPSWYALRGLVSPTPT*THTWSS Trigger: TGAGGACCAGGTGTGGGTGCAGGTGGGCGTGGGTGA...CACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | TATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACACCCACCTGCACCCACACCTaGTCCTCAGGTTCTAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YSRGPALLVCAARVSVTPTCTHT*SSGSSL Trigger: AAGGCTAGAACCTGAGGACCAGGTGTGGGTGCAGGT...GGGTGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTTCACCCACGCCCACCTaGACCCACACCTGGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATSPTPT*THTWSS Trigger: TGAGGACCAGGTGTGGGTGCAGGTGGGCGTGGGTGA...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | AAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCAGACAGTCACCCACGCCCACCTaGACCCACACCTGGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KVLGRNPATAPRCLDLRQSPTPT*THTWSS Trigger: TGAGGACCAGGTGTGGGTGCAGGTGGGCGTGGGTGA...CTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTCAGAGGAGGAGAGCCTaGCACCAGACCCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATQRRRA*HQTQKQ Trigger: CTGCTTCTGGGTCTGGTGTCAGGCTCTCCTCCTCTG...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCCCTTGGCTGCCATGGTaGCCTGGTGTGCCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HSKVLGRNPATAPRCLDLPWLPW*PGVPGR Trigger: CCTTCCAGGCACACCAGGTCACCATGGCAGCCAAGG...GAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCATTCATTGCCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTACAGAGGAGGAGAGCCTaGCACCAGACCCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PVSIHCQQWDWKWLPLFLQRRRA*HQTQKQ Trigger: CTGCTTCTGGGTCTGGTGTCAGGCTCTCCTCCTCTG...TAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAATGAATGGAGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCAGAGGAGGAGAGCCTaGCACCAGACCCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHSKVLGRNPATAPRCLDQRRRA*HQTQKQ Trigger: CTGCTTCTGGGTCTGGTGTCAGGCTCTCCTCCTCTG...GTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | TGCGCTGCGCGGGTTAGTGTCACACCCTCCACTGAGGAGCAAGTGCCAGCTCCGAGGTACTGTCTGTCTTaGTGCTGGCATAGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CAARVSVTPSTEEQVPAPRYCLS*CWHRCQ Trigger: TTGGCATCTATGCCAGCATCAAGACAGACAGTACCT...CGGAGCTGGCACTTGCTCCTCAGTGGAGGGTGTGACACTAACCCGCGCAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTCCTAAGTCATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCCAGAGGAGGAGAGCCTaGCACCAGACCCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PLFLSHSQYSRGPALLVCQRRRA*HQTQKQ Trigger: CTGCTTCTGGGTCTGGTGTCAGGCTCTCCTCCTCTG...GCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATGACTTAGGAAGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | CAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATTCCCATGGTGACCTGGTGTaGCTGGAAGGCCGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QQWDWKWLPLFLSHSQYSHGDLV*LEGRAA Trigger: GGCAGCCCGGCCTTCCAGGCACACCAGGTCACCATG...GGAATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | CAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCATCCCTGGCCCGGTAGACAGTaGCGTGCACAGCAAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QRWSQGPRGDTGLGMEHPWPGRQ*RAQQSS Trigger: ACTACTTTGCTGTGCACGCCACTGTCTACCGGGCCA...GGGATGCTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTTGGCCCGGTAGACAGTaGCGTGCACAGCAAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATWPGRQ*RAQQSS Trigger: ACTACTTTGCTGTGCACGCCACTGTCTACCGGGCCA...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTACCTGCACCCACACCTaGTCCTCAGGTTCTAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATTCTHT*SSGSSL Trigger: AAGGCTAGAACCTGAGGACCAGGTGTGGGTGCAGGT...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | GCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCACCTGCACCCACACCTaGTCCTCAGGTTCTAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AYCILKSWAETQPLLHAVTCTHT*SSGSSL Trigger: AAGGCTAGAACCTGAGGACCAGGTGTGGGTGCAGGT...GACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR GCA 90 bp | TGCCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATCAGGCAGGCCTTGGCTaGCATGGTGACCTGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: CQQWDWKWLPLFLSHSQYQAGLG*HGDLVC Trigger: GCACACCAGGTCACCATGGCAGCCAAGGCCTGCCTG...ATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | CATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCTGGCCCGGTAGACAGTaGCGTGCACAGCAAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: HSKVLGRNPATAPRCLDLWPGRQ*RAQQSS Trigger: ACTACTTTGCTGTGCACGCCACTGTCTACCGGGCCA...GAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | TTCCTAAGTCATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGTGGCCCGGTAGACAGTaGCGTGCACAGCAAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FLSHSQYSRGPALLVCAAWPGRQ*RAQQSS Trigger: ACTACTTTGCTGTGCACGCCACTGTCTACCGGGCCA...CGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATGACTTAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CCA 90 bp | GGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATTCCAGGGGGCCGATCAAACTGCAAGCTaGCCCGGTAGACAGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GLEVAPSLPKSFTIFQGADQTAS*PGRQWR Trigger: ACGCCACTGTCTACCGGGCCAGCTTGCAGTTTGATC...GGCCCCCTGGAATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | AAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCAGACAGTGGACTGCCCGTTTTTaGCAAGATCAAACTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: KVLGRNPATAPRCLDLRQWTARF*QDQTAS Trigger: GCTTGCAGTTTGATCTTGTCAAAAACGGGCAGTCCA...CTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTTGGACTGCCCGTTTTTaGCAAGATCAAACTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PTAASLLHSKVLGRNPATWTARF*QDQTAS Trigger: GCTTGCAGTTTGATCTTGTCAAAAACGGGCAGTCCA...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | GAGCAGCAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGAGGTACTGTCTGTCTTaGTGCTGGCATAGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EQQRWSQGPRGDTGLGMERYCLS*CWHRCQ Trigger: TTGGCATCTATGCCAGCATCAAGACAGACAGTACCT...CTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCATCCCAGGTACTGTCTGTCTTaGTGCTGGCATAGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QRWSQGPRGDTGLGMEHPRYCLS*CWHRCQ Trigger: TTGGCATCTATGCCAGCATCAAGACAGACAGTACCT...GGGATGCTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | CATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCTGGACTGCCCGTTTTTaGCAAGATCAAACTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: HSKVLGRNPATAPRCLDLWTARF*QDQTAS Trigger: GCTTGCAGTTTGATCTTGTCAAAAACGGGCAGTCCA...GAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR TCA 90 bp | TTCCTAAGTCATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGTGGACTGCCCGTTTTTaGCAAGATCAAACTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLSHSQYSRGPALLVCAAWTARF*QDQTAS Trigger: GCTTGCAGTTTGATCTTGTCAAAAACGGGCAGTCCA...CGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATGACTTAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | CAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACAACGGCCAGGCAGGCCTaGGCTGCCATGGTGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: QYSRGPALLVCAARVSVTTARQA*AAMVTW Trigger: CCAGGTCACCATGGCAGCCAAGGCCTGCCTGGCCGT...TGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | TCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCAGACAGCCTGACGGCCAGGCAGGCCTaGGCTGCCATGGTGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: SWAETQPLLHAVLTSDSLTARQA*AAMVTW Trigger: CCAGGTCACCATGGCAGCCAAGGCCTGCCTGGCCGT...CAGGCTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | CATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTACGGCCAGGCAGGCCTaGGCTGCCATGGTGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: HSQYSRGPALLVCAARVSTARQA*AAMVTW Trigger: CCAGGTCACCATGGCAGCCAAGGCCTGCCTGGCCGT...ACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | TATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGCGGGTTAGTGTCACACCCAGGCTGGGGATCTTGTaGTCGTCCAGAGGAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: YSRGPALLVCAARVSVTPRLGIL*SSRGGE Trigger: CTCTCCTCCTCTGGACGACAACAAGATCCCCAGCCT...GGGTGTGACACTAACCCGCGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | GCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCACGGCCAGGCAGGCCTaGGCTGCCATGGTGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: AYCILKSWAETQPLLHAVTARQA*AAMVTW Trigger: CCAGGTCACCATGGCAGCCAAGGCCTGCCTGGCCGT...GACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | TCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACCTCAGACAGCCTGAGGCTGGGGATCTTGTaGTCGTCCAGAGGAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SWAETQPLLHAVLTSDSLRLGIL*SSRGGE Trigger: CTCTCCTCCTCTGGACGACAACAAGATCCCCAGCCT...CAGGCTGTCTGAGGTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | GGACCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCCACAGGCTGGGGATCTaGTTGTCGTCCAGAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPTAASLLHSKVLGRNPAHRLGI*LSSRGG Trigger: TCCTCCTCTGGACGACAACAAGATCCCCAGCCTGTG...GGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | GAGCAGCAGAGATGGAGTCAGGGACCTAGAGGGGACACAGGACTAGGAATGGAGCGGCTCTCGGATCGCTaGGCACTGAAGGCTGATCGT | + |
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Preference number: 5 (lower is better) Translates to: EQQRWSQGPRGDTGLGMERLSDR*ALKADR Trigger: ACGATCAGCCTTCAGTGCCAAGCGATCCGAGAGCCG...CTCCATTCCTAGTCCTGTGTCCCCTCTAGGTCCCTGACTCCATCTCTGCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | CCCACAGCTGCCAGCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTCGGCTCTCGGATCGCTaGGCACTGAAGGCTGATCGT | + |
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Preference number: 5 (lower is better) Translates to: PTAASLLHSKVLGRNPATRLSDR*ALKADR Trigger: ACGATCAGCCTTCAGTGCCAAGCGATCCGAGAGCCG...AGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGCTGGCAGCTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | GCCTACTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCCGGCTCTCGGATCGCTaGGCACTGAAGGCTGATCGT | + |
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Preference number: 5 (lower is better) Translates to: AYCILKSWAETQPLLHAVRLSDR*ALKADR Trigger: ACGATCAGCCTTCAGTGCCAAGCGATCCGAGAGCCG...GACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAGTAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | CTGCATTCTAAAGTCCTGGGCAGAAACCCAGCCACTGCTCCACGCTGTCTTGACAGGCTGGGGATCTTGTaGTCGTCCAGAGGAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: LHSKVLGRNPATAPRCLDRLGIL*SSRGGE Trigger: CTCTCCTCCTCTGGACGACAACAAGATCCCCAGCCT...GTCAAGACAGCGTGGAGCAGTGGCTGGGTTTCTGCCCAGGACTTTAGAATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | TTCCTAAGTCATTCACAATATTCCAGGGGGCCAGCCCTCCTGGTATGCGCTGCGAGGCTGGGGATCTTGTaGTCGTCCAGAGGAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: FLSHSQYSRGPALLVCAARLGIL*SSRGGE Trigger: CTCTCCTCCTCTGGACGACAACAAGATCCCCAGCCT...CGCAGCGCATACCAGGAGGGCTGGCCCCCTGGAATATTGTGAATGACTTAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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| CDS-3UTR CAA 90 bp | TGCCAGCAGTGGGACTGGAAGTGGCTCCCTCTCTTCCTAAGTCATTCACAATATCGGCTCTCGGATCGCTaGGCACTGAAGGCTGATCGT | + |
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Preference number: 5 (lower is better) Translates to: CQQWDWKWLPLFLSHSQYRLSDR*ALKADR Trigger: ACGATCAGCCTTCAGTGCCAAGCGATCCGAGAGCCG...ATATTGTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114815.3 ENSMUST00000114816.8 ENSMUST00000114818.9 ENSMUST00000114821.9 |
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