Pregenerated sensors for C1QTNF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040794Ensembl transcript IDs: ENSMUST00000111466.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGTaGGGCGTTCGGGCCGCGGTCCCGGCTCGGCATGCATGCCCCACG | + |
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Preference number: 1 (lower is better) Translates to: WQSPGVLSRQSCSDR*GVRAAVPARHACPT Trigger: CGTGGGGCATGCATGCCGAGCCGGGACCGCGGCCCGAACGCCCCACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| 3UTR GCA 90 bp | GCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATaGTCGGACCGGTGGGGCGTTCGGGCCGCGGTCCCGGCTCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: APLYWQSPGVLSRQS*SDRWGVRAAVPARH Trigger: ATGCCGAGCCGGGACCGCGGCCCGAACGCCCCACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| 3UTR TCA 90 bp | AAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTaGGCAGGCAGTCATGCTCGGACCGGTGGGGCGTTCGGGCCGCGG | + |
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Preference number: 1 (lower is better) Translates to: KADRQPHFIGRVQAC*AGSHARTGGAFGPR Trigger: CCGCGGCCCGAACGCCCCACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| 3UTR GCA 72 bp | TGGGGCGTTCGGGCCGCGGTCCCGGCTCGGCATGCATaGCCCACGGCTCTCCCGGGCTCCTCCAAGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: WGVRAAVPARHA*PTALPGSSKQR Trigger: CCTCTGCTTGGAGGAGCCCGGGAGAGCCGTGGGGCATGCATGCCGAGCCGGGACCGCGGCCCGAACGCCCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR TCA 90 bp | AGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAACACCAGGTAGCCGCTaGAGGTGGCGCCCGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: RLTGSPTLLAESRRAEQATPGSR*RWRPAR Trigger: GCGCGCCGGGCGCCACCTTCAGCGGCTACCTGGTGT...TGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR TCA 90 bp | GGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCAGCCGCCGAGAAGGCTaGCCGCAGCTCCGAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSPTLLAESRRAEQAVMLSRREG*PQLRGA Trigger: GGCTCCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCT...GAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | GGGCAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGCCGCCATCTCCGACGTaGCCTCCAGCGGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQDHKADRQPHFIGRVQAPPSPT*PPAGWC Trigger: GCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGG...CGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | GGGCAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGGCGCCTGGCCGTCGCTaGTCGTCGAAAGCCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GQDHKADRQPHFIGRVQAAPGRR*SSKASA Trigger: GGCGCTGGCTTTCGACGAGCAGCGACGGCCAGGCGC...CGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CCA 90 bp | CTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGTGGTGCCCTCCAGCGGGGTaGTGCGAGCCGCCGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYWQSPGVLSRQSCSDRWCPPAG*CEPPRR Trigger: CCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCA...CCACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | CAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCCCTCCAGCGGGGTGGTaGGAGCCGCCGAGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QDHKADRQPHFIGRVQACPPAGW*EPPRRL Trigger: CAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGG...GCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | GGGCAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGACCGACAGGCTCTTGTaGGGGGCCTTGCCGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GQDHKADRQPHFIGRVQATDRLL*GALPAV Trigger: CACGGCCGGCAAGGCCCCGCACAAGAGCCTGTCGGT...CGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | AGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCATCGAAAGCCAGCGCCTaGACCTCGTCGCGGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: RLTGSPTLLAESRRAEQASKASA*TSSRLR Trigger: GCGCAACCGCGACGAGGTGCAGGCGCTGGCTTTCGA...TGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | CAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTACTGCGGAGCGCCGTaGAGCCGCAGCCACACCGTG | + |
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Preference number: 4 (lower is better) Translates to: QDHKADRQPHFIGRVQACYCGAP*SRSHTV Trigger: CACGGTGTGGCTGCGGCTGCACGGCGCTCCGCAGTA...GCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | AGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCATCACCGACAGCGTCTTaGGCGGCAGCTTGCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RLTGSPTLLAESRRAEQASPTAS*AAACPA Trigger: CGCTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGA...TGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CCA 90 bp | CAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCAGTCGAGCTGCAGCATaGCGCTCTGGCTGGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: QDHKADRQPHFIGRVQACSRAAA*RSGWPR Trigger: GCGCGGCCAGCCAGAGCGCCATGCTGCAGCTCGACT...GCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR TCA 90 bp | ACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGGGCAGCATCACGCTCTaGCTCTGCATCTCACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TGSPTLLAESRRAEQAVMGSITL*LCISRR Trigger: GCGCCGTGAGATGCAGAGTCAGAGCGTGATGCTGCC...CATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CCA 90 bp | AGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCACGTCGTCGTAAATCATaGCCTGCACCTCGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RLTGSPTLLAESRRAEQARRRKS*PAPRRG Trigger: ACCGCGACGAGGTGCAGGCCATGATTTACGACGACG...TGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| 3UTR CAA 72 bp | GGCAGGACCATAAGGCTGACAGGCAGCCCCACTTTATaGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: GRTIRLTGSPTL*AESRRAEQAVM Trigger: CATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR TCA 90 bp | CCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGGAAGCCTGAGAAAGTaGTGTACTTGCCGTGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PTLLAESRRAEQAVMLGPGSLRK*CTCRGC Trigger: GCAACCACGGCAAGTACATCACTTTCTCAGGCTTCC...CGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR GCA 90 bp | AGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCATGTACTTGCCGTGGTTaGTGTAGGCGCCATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RLTGSPTLLAESRRAEQACTCRG*CRRHSH Trigger: ATGGCTATGGCGCCTACAGCAACCACGGCAAGTACA...TGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR TCA 90 bp | CCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGTACACCAGGAAGCCTaGGAAAGTGATGTACTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PTLLAESRRAEQAVMLGPVHQEA*ESDVLA Trigger: GGCAAGTACATCACTTTCTCAGGCTTCCTGGTGTAC...CGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 90 bp | GCGCAGGCGCGTCGGCGTCGGCGTCCGCGTACACCAGGTAGCCGCTaGAGGTGGCGCCCGGCGCGCCGAGCGCGTACTGCGGAGCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: AQARRRRRPRTPGSR*RWRPARRARTAERR Trigger: ACGGCGCTCCGCAGTACGCGCTCGGCGCGCCGGGCGCCACCTTCAGCGGCTACCTGGTGTACGCGGACGCCGACGCCGACGCGCCTGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 90 bp | CTCCGACGTGCCCTCCAGCGGGGTGGTGCGAGCCGCCGAGAAGGCTaGCCGCAGCTCCGAGGAGCCAGGGCCAGCCGGGCCCAGTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LRRALQRGGASRREG*PQLRGARASRAQCP Trigger: TGGGCACTGGGCCCGGCTGGCCCTGGCTCCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 90 bp | CGTGCAGCCGCAGCCACACCGTGTCGCCGTAGTCGAGCTGCAGCATaGCGCTCTGGCTGGCCGCGCGCCGCGCGCCTGGCCGTCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RAAAATPCRRSRAAA*RSGWPRAARLAVAA Trigger: AGCAGCGACGGCCAGGCGCGCGGCGCGCGGCCAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACACGGTGTGGCTGCGGCTGCACG 76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 90 bp | GCCACACCGTGTCGCCGTAGTCGAGCTGCAGCATGGCGCTCTGGCTaGCCGCGCGCCGCGCGCCTGGCCGTCGCTGCTCGTCGAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ATPCRRSRAAAWRSG*PRAARLAVAARRKP Trigger: TGGCTTTCGACGAGCAGCGACGGCCAGGCGCGCGGCGCGCGGCCAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACACGGTGTGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 90 bp | TCGCCACCTATGTTTACCAGCTCGGTGTCGAAGGCCAACGGCCGGTaGCGCGGGCCGGGGGCGGCGTCCGAGCCCACCAGGCTGCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SPPMFTSSVSKANGR*RGPGAASEPTRLRV Trigger: CACGCGCAGCCTGGTGGGCTCGGACGCCGCCCCCGGCCCGCGCCACCGGCCGTTGGCCTTCGACACCGAGCTGGTAAACATAGGTGGCGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 90 bp | TGTCGAAGGTCACCGCCATCTCCGACGTGCCCTCCAGCGGGGTGGTaGGAGCCGCCGAGAAGGCTGACCGCAGCTCCGAGGAGCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: CRRSPPSPTCPPAGW*EPPRRLTAAPRSQG Trigger: GCCCTGGCTCCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGACCTTCGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 90 bp | CCTTGTCGAAGGTCACCGCCATCTCCGACGTGCCCTCCAGCGGGGTaGTGCGAGCCGCCGAGAAGGCTGACCGCAGCTCCGAGGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PCRRSPPSPTCPPAG*CEPPRRLTAAPRSQ Trigger: CTGGCTCCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGACCTTCGACAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 90 bp | CGATGTTCACGTACACCTTGTCGAAGGTCACCGCCATCTCCGACGTaGCCTCCAGCGGGGTGGTGCGAGCCGCCGAGAAGGCTGACCGCA | + |
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Preference number: 5 (lower is better) Translates to: RCSRTPCRRSPPSPT*PPAGWCEPPRRLTA Trigger: TGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGACCTTCGACAAGGTGTACGTGAACATCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 90 bp | TCATCAGCTTCACCGACAGCGTCTTGCGCGGCAGCTTGCCCAGCGTaGAGGAGAAGAAATAGGCTCCCGGCAGGCGGCAGCGGAACACGC | + |
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Preference number: 5 (lower is better) Translates to: SSASPTASCAAACPA*RRRNRLPAGGSGTR Trigger: GCGTGTTCCGCTGCCGCCTGCCGGGAGCCTATTTCTTCTCCTTCACGCTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGAAGCTGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | GGGCAGGACCATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGCTCTTGTGCGGGGCCTaGCCGGCCGTGAAGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GQDHKADRQPHFIGRVQALLCGA*PAVKEK Trigger: CTTCTCCTTCACGGCCGGCAAGGCCCCGCACAAGAG...CGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTATGGTCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | ACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGATCACCGACAGGCTCTaGTGCGGGGCCTTGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGSPTLLAESRRAEQAVMITDRL*CGALPA Trigger: GGCCGGCAAGGCCCCGCACAAGAGCCTGTCGGTGAT...CATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | GGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCTTCACCGACAGCGTCTaGCGCGGCAGCTTGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSPTLLAESRRAEQAVMLFTDSV*RGSLPS Trigger: GCTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGAA...GAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | ACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGTGTGCACCTCGTCGCGGTaGCGCACCAGCATCACCGAC | + |
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Preference number: 5 (lower is better) Translates to: TLLAESRRAEQAVMLGPVCTSSR*RTSITD Trigger: GTCGGTGATGCTGGTGCGCAACCGCGACGAGGTGCA...CACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | CTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGGCAGTCATGCTCGGACCGGTGGGTCTTGCGCGGCAGCTaGCCCAGCGTGAAGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LYWQSPGVLSRQSCSDRWVLRGS*PSVKEK Trigger: CTTCTCCTTCACGCTGGGCAAGCTGCCGCGCAAGAC...CCACCGGTCCGAGCATGACTGCCTGCTCAGCACGCCTGGACTCTGCCAATAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 90 bp | GGCCGGCGGCGGCGAGGTCAGGGTACACCAGGAAGCCTGAGAAAGTaGTGTACTTGCCGTGGTTGCTGTAGGCGCCATAGCCATCGTGAT | + |
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Preference number: 5 (lower is better) Translates to: GRRRRGQGTPGSLRK*CTCRGCCRRHSHRD Trigger: ATCACGATGGCTATGGCGCCTACAGCAACCACGGCAAGTACATCACTTTCTCAGGCTTCCTGGTGTACCCTGACCTCGCCGCCGCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS-3UTR CAA 90 bp | ATAAGGCTGACAGGCAGCCCCACTTTATTGGCAGAGTCCAGGCGTGCTGAGCAGATGTTCACGTACACCTaGTCGAAGGTCACCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: IRLTGSPTLLAESRRAEQMFTYT*SKVTAI Trigger: GATGGCGGTGACCTTCGACAAGGTGTACGTGAACAT...CTGCTCAGCACGCCTGGACTCTGCCAATAAAGTGGGGCTGCCTGTCAGCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 72 bp | GCCCTCCAGCGGGGTGGTGCGAGCCGCCGAGAAGGCTaGCCGCAGCTCCGAGGAGCCAGGGCCAGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALQRGGASRREG*PQLRGARASRA Trigger: GGCCCGGCTGGCCCTGGCTCCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 72 bp | CCGCTGAAGGTGGCGCCCGGCGCGCCGAGCGCGTACTaGGGAGCGCCGTGCAGCCGCAGCCACACCGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: PLKVAPGAPSAY*GAPCSRSHTVS Trigger: CGACACGGTGTGGCTGCGGCTGCACGGCGCTCCGCAGTACGCGCTCGGCGCGCCGGGCGCCACCTTCAGCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 72 bp | CGTCGGCGTCGGCGTCCGCGTACACCAGGTAGCCGCTaGAGGTGGCGCCCGGCGCGCCGAGCGCGTACTGCG | + |
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Preference number: 6 (lower is better) Translates to: RRRRRPRTPGSR*RWRPARRARTA Trigger: CGCAGTACGCGCTCGGCGCGCCGGGCGCCACCTTCAGCGGCTACCTGGTGTACGCGGACGCCGACGCCGACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 72 bp | TGTCGCCGTAGTCGAGCTGCAGCATGGCGCTCTGGCTaGCCGCGCGCCGCGCGCCTGGCCGTCGCTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CRRSRAAAWRSG*PRAARLAVAAR Trigger: ACGAGCAGCGACGGCCAGGCGCGCGGCGCGCGGCCAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACA 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 72 bp | TCACCGCCATCTCCGACGTGCCCTCCAGCGGGGTGGTaGGAGCCGCCGAGAAGGCTGACCGCAGCTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPPSPTCPPAGW*EPPRRLTAAPR Trigger: CCTCGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS CCA 72 bp | AGGTCACCGCCATCTCCGACGTGCCCTCCAGCGGGGTaGTGCGAGCCGCCGAGAAGGCTGACCGCAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RSPPSPTCPPAG*CEPPRRLTAAP Trigger: CGGAGCTGCGGTCAGCCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGACCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 72 bp | GGCGCCCGGCACGCGACAGCGGAACCGCCCGGTGGCTaGGTCGAAGTCACCCCCGATGTTCACGTACACCTT | + |
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Preference number: 6 (lower is better) Translates to: GARHATAEPPGG*VEVTPDVHVHL Trigger: AAGGTGTACGTGAACATCGGGGGTGACTTCGACGCAGCCACCGGGCGGTTCCGCTGTCGCGTGCCGGGCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS GCA 72 bp | CGTACACCTTGTCGAAGGTCACCGCCATCTCCGACGTaGCCTCCAGCGGGGTGGTGCGAGCCGCCGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RTPCRRSPPSPT*PPAGWCEPPRR Trigger: CCTTCTCGGCGGCTCGCACCACCCCGCTGGAGGGCACGTCGGAGATGGCGGTGACCTTCGACAAGGTGTACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 72 bp | TCACCGACAGCGTCTTGCGCGGCAGCTTGCCCAGCGTaGAGGAGAAGAAATAGGCTCCCGGCAGGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPTASCAAACPA*RRRNRLPAGGS Trigger: GCTGCCGCCTGCCGGGAGCCTATTTCTTCTCCTTCACGCTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 72 bp | GCCGGCGGCGGCGAGGTCAGGGTACACCAGGAAGCCTaGGAAAGTGATGTACTTGCCGTGGTTGCTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGGGEVRVHQEA*ESDVLAVVAVG Trigger: GCCTACAGCAACCACGGCAAGTACATCACTTTCTCAGGCTTCCTGGTGTACCCTGACCTCGCCGCCGCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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| CDS TCA 72 bp | CGGCGAGGTCAGGGTACACCAGGAAGCCTGAGAAAGTaGTGTACTTGCCGTGGTTGCTGTAGGCGCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: RRGQGTPGSLRK*CTCRGCCRRHS Trigger: GCTATGGCGCCTACAGCAACCACGGCAAGTACATCACTTTCTCAGGCTTCCTGGTGTACCCTGACCTCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111466.3 |
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