Pregenerated sensors for C1QTNF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058914Ensembl transcript IDs: ENSMUST00000022853.15, ENSMUST00000110523.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTTGTTGTACAGAGTCAAGAGAGCTCTACCACAGCCCCAGGAATaGAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLLYRVKRALPQPQE*NGKEKMWQARWEKS Trigger: ACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGCTCTCTTGACTCTGTACAACAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR CCA 90 bp | GTTGTACAGAGTCAAGAGAGCTCTACCACAGCCCCAGGAATGCAATaGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATA | + |
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Preference number: 1 (lower is better) Translates to: VVQSQESSTTAPGMQ*QREDVASQMGEKFI Trigger: TATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGCTCTCTTGACTCTGTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR TCA 90 bp | CCAAGGTCATCTGGAAAGATTACCTTGTGGTCTATTCTTAGCCCCTaGAGCATCCAACATTATTGGTATGCCATTAGAATGAGTAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PRSSGKITLWSILSP*SIQHYWYAIRMSSS Trigger: ACTGCTACTCATTCTAATGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAATCTTTCCAGATGACCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR GCA 90 bp | TATGCCATTAGAATGAGTAGCAGTGTGACCAATGCAACACTTAAATaGTCCATAAAGAACCCCCGACTTCAACATCCTTCATATCCTAAC | + |
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Preference number: 1 (lower is better) Translates to: YAIRMSSSVTNATLK*SIKNPRLQHPSYPN Trigger: GTTAGGATATGAAGGATGTTGAAGTCGGGGGTTCTTTATGGAGCATTTAAGTGTTGCATTGGTCACACTGCTACTCATTCTAATGGCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR GCA 90 bp | GCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATATCTaGAAGTCTAAGCCAGTAGAACTCAATATTATCTACATGGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AKRRCGKPDGRKVYI*KSKPVELNIIYMGL Trigger: CAACCCCATGTAGATAATATTGAGTTCTACTGGCTTAGACTTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTAGCAGTGAGCCCCTaGAGCATCCAACATTATTGG | + |
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Preference number: 2 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKVAVSP*SIQHYW Trigger: CCAATAATGTTGGATGCTTCAGGGGCTCACTGCTAC...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR CCA 90 bp | AACGCTGGGCAGCAAAAGTCAGTCCTCTGGGAAACAGCCAGTGTTCTTAACCGCAAATTGCCCCCAAAGTaGAGATATCCTGTCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NAGQQKSVLWETASVLNRKLPPK*RYPVFL Trigger: AAGGAAGACAGGATATCTCCACTTTGGGGGCAATTT...GCGGTTAAGAACACTGGCTGTTTCCCAGAGGACTGACTTTTGCTGCCCAGCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAAATTGCCCCCAAAGTaGAGATATCCTGTCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: YHSPRNAMAKRRCGKPDGKLPPK*RYPVFL Trigger: AAGGAAGACAGGATATCTCCACTTTGGGGGCAATTT...CCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAAATGAGCTGAAAACTTaGTTGACTCGAAAGCCAATA | + |
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Preference number: 2 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKNELKT*LTRKPI Trigger: TATTGGCTTTCGAGTCAACCAAGTTTTCAGCTCATT...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTATTTCCCAAGGTCATCTGGAAAGATTACCTTGTGGTCTATTCTTAGCCCCAGCTCAGCTATAAATTaGCCCCAAAGTGGAGATATC | + |
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Preference number: 2 (lower is better) Translates to: EYFPRSSGKITLWSILSPSSAIN*PQSGDI Trigger: GATATCTCCACTTTGGGGGCAATTTATAGCTGAGCT...GGGGCTAAGAATAGACCACAAGGTAATCTTTCCAGATGACCTTGGGAAATACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTTGGTTGACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTGTAGCAGTGAGCCCCTaGAGCATCCAACATTATTGG | + |
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Preference number: 2 (lower is better) Translates to: ENLVDSKANITFKQSTKTVAVSP*SIQHYW Trigger: CCAATAATGTTGGATGCTTCAGGGGCTCACTGCTAC...AGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTCAACCAAGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATTAGAATGAGTAGCAGTGTGACCAATGCAACACTTAAATGCTCCATAAAGAGCTCAGCTATAAATTaGCCCCAAAGTGGAGATATC | + |
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Preference number: 2 (lower is better) Translates to: AIRMSSSVTNATLKCSIKSSAIN*PQSGDI Trigger: GATATCTCCACTTTGGGGGCAATTTATAGCTGAGCT...CTTTATGGAGCATTTAAGTGTTGCATTGGTCACACTGCTACTCATTCTAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR CCA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGGGCAAAGAGAAGATGTaGCAAGCCAGATGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VMDLINGIHFTLHPFVCLGKEKM*QARWEK Trigger: TTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCC...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR TCA 72 bp | CTGGTGCCTGCAGAGGCCAGAAGAGGGTGTTGTATCTaGGGGCAAGATGGCTGTAAGGTGACACGTGAACGC | + |
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Preference number: 3 (lower is better) Translates to: LVPAEARRGCCI*GQDGCKVTRER Trigger: GCGTTCACGTGTCACCTTACAGCCATCTTGCCCTCAGATACAACACCCTCTTCTGGCCTCTGCAGGCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| 3UTR GCA 72 bp | CATGTGTGTCTGTGCAGTGTAGGCATGCCTGGTGCCTaGAGAGGCCAGAAGAGGGTGTTGTATCTGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: HVCLCSVGMPGA*RGQKRVLYLRA Trigger: TGCCCTCAGATACAACACCCTCTTCTGGCCTCTGCAGGCACCAGGCATGCCTACACTGCACAGACACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| 3UTR TCA 72 bp | GAGGGTGTTGTATCTGAGGGCAAGATGGCTGTAAGGTaGCACGTGAACGCTGGGCAGCAAAAGTCAGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: EGVVSEGKMAVR*HVNAGQQKSVL Trigger: GAGGACTGACTTTTGCTGCCCAGCGTTCACGTGTCACCTTACAGCCATCTTGCCCTCAGATACAACACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| 3UTR CCA 72 bp | AGTCAAGAGAGCTCTACCACAGCCCCAGGAATGCAATaGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SQESSTTAPGMQ*QREDVASQMGE Trigger: TTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGCTCTCTTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR-3UTR CAA 90 bp | AACGCTGGGCAGCAAAAGTCAGTCCTCTGGGAAACAGCCAGTGTTCTTAACCGCTCTGGAAAGATTACCTaGTGGTCTATTCTTAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: NAGQQKSVLWETASVLNRSGKIT*WSILSP Trigger: GGGGCTAAGAATAGACCACAAGGTAATCTTTCCAGA...GCGGTTAAGAACACTGGCTGTTTCCCAGAGGACTGACTTTTGCTGCCCAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| 3UTR-3UTR CAA 90 bp | CTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGTCTGGAAAGATTACCTaGTGGTCTATTCTTAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LPQPQECNGKEKMWQARWSGKIT*WSILSP Trigger: GGGGCTAAGAATAGACCACAAGGTAATCTTTCCAGA...CCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR CCA 72 bp | CCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTaGCAAGCCAGATGGGAGAAAAGTTTATATCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: PQPQECNGKEKM*QARWEKSLYLQ Trigger: TTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR GCA 72 bp | AGAATGAGTAGCAGTGTGACCAATGCAACACTTAAATaGTCCATAAAGAACCCCCGACTTCAACATCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RMSSSVTNATLK*SIKNPRLQHPS Trigger: TGAAGGATGTTGAAGTCGGGGGTTCTTTATGGAGCATTTAAGTGTTGCATTGGTCACACTGCTACTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR TCA 72 bp | TCTGGAAAGATTACCTTGTGGTCTATTCTTAGCCCCTaGAGCATCCAACATTATTGGTATGCCATTAGAATG | + |
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Preference number: 3 (lower is better) Translates to: SGKITLWSILSP*SIQHYWYAIRM Trigger: CATTCTAATGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAATCTTTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR GCA 72 bp | AGATGTGGCAAGCCAGATGGGAGAAAAGTTTATATCTaGAAGTCTAAGCCAGTAGAACTCAATATTATCTAC | + |
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Preference number: 3 (lower is better) Translates to: RCGKPDGRKVYI*KSKPVELNIIY Trigger: GTAGATAATATTGAGTTCTACTGGCTTAGACTTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| 3UTR GCA 72 bp | TTTTCCTATGTAGAGTCTAGTAAGTGGGCTTATTTTTaGCCCATCATAATCAGGCTAGTCTCTGAAATATTA | + |
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Preference number: 3 (lower is better) Translates to: FSYVESSKWAYF*PIIIRLVSEIL Trigger: TAATATTTCAGAGACTAGCCTGATTATGATGGGGCAAAAATAAGCCCACTTACTAGACTCTACATAGGAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | AACGCTGGGCAGCAAAAGTCAGTCCTCTGGGAAACAGCCAGTGTTCTTAACCGCCCTTTGGGGCCATGCTaGCCCCGTTCTCCTCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NAGQQKSVLWETASVLNRPLGPC*PRSPRG Trigger: CCCTCGAGGAGAACGGGGGCAGCATGGCCCCAAAGG...GCGGTTAAGAACACTGGCTGTTTCCCAGAGGACTGACTTTTGCTGCCCAGCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| CDS-3UTR CCA 90 bp | TACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGCGGCCAGTCTGCTGGTaGCTCTGCACTATCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: YHSPRNAMAKRRCGKPDGRPVCW*LCTILA Trigger: GGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCG...CCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | TACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGTCTCCTTTGGGGCCATaGTGCCCCCGTTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: YHSPRNAMAKRRCGKPDGSPLGP*CPRSPR Trigger: TCGAGGAGAACGGGGGCAGCATGGCCCCAAAGGAGA...CCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGAGTCTGCTGGTGGCTCTaGACTATCCTGGCCACCGCT | + |
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Preference number: 4 (lower is better) Translates to: ALPQPQECNGKEKMWQARVCWWL*TILATA Trigger: AGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGAC...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAAAGGTGGAGAAGCGCTaGTGGTCCCCGTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKKVEKR*WSPWRA Trigger: TGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTT...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATCACTTTCTCCCTCCTaGAGCCGCTACGGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ALPQPQECNGKEKMWQARSLSPS*SRYGQS Trigger: AGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGA...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGAGCCATGAATGCAATCTaGAGTTCTGGTGGCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: ALPQPQECNGKEKMWQARAMNAI*SSGGTP Trigger: AGGGGTGCCACCAGAACTGCAGATTGCATTCATGGC...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGAAAAGAGCAGAAAGCCTaGGAAGGTGGAGAAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALPQPQECNGKEKMWQARKEQKA*EGGEAL Trigger: CAGCGCTTCTCCACCTTCGCAGGCTTTCTGCTCTTT...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | TACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGCCTTTGGCCCCTTCATaGCCAGTAGCTCCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: YHSPRNAMAKRRCGKPDGPLAPS*PVAPLF Trigger: GAACAATGGAGCTACTGGCCATGAAGGGGCCAAAGG...CCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | CTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGAATCTGCAGTTCTGGTaGCACCCCTGGGTAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LPQPQECNGKEKMWQARWNLQFW*HPWVAF Trigger: AAAGGCTACCCAGGGGTGCCACCAGAACTGCAGATT...CCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | CAACATCCTTCATATCCTAACAACCCTAGCTCAGCTATAAATTGCCCCCAAAGTGTGGAGAAGCGCTGGTaGTCCCCGTGGAGGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: QHPSYPNNPSSAINCPQSVEKRW*SPWRAP Trigger: CGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCAC...ACTTTGGGGGCAATTTATAGCTGAGCTAGGGTTGTTAGGATATGAAGGATGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATATCTGCAAGTCTAAGCCGCTGGTGGTCCCCGTaGAGGGCACCGTTGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: REDVASQMGEKFISASLSRWWSP*RAPLPI Trigger: AATGGGCAACGGTGCCCTCCACGGGGACCACCAGCG...GCTTAGACTTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAACCAGCTTGTGGAGACTaGCCCCAGAATGGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKPACGD*PQNGLI Trigger: GATCAACCCATTCTGGGGCCAGTCTCCACAAGCTGG...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR TCA 90 bp | GGCTGTAAGGTGACACGTGAACGCTGGGCAGCAAAAGTCAGTCCTCTGGGAAACTTGCTAGAGAAGCCATaGATGCAATCTGCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GCKVTRERWAAKVSPLGNLLEKP*MQSAVL Trigger: CAGAACTGCAGATTGCATTCATGGCTTCTCTAGCAA...GTTTCCCAGAGGACTGACTTTTGCTGCCCAGCGTTCACGTGTCACCTTACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAACCTTTGGCCCCTTCATaGCCAGTAGCTCCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKPLAPS*PVAPLF Trigger: GAACAATGGAGCTACTGGCCATGAAGGGGCCAAAGG...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATAAGGTGGAGAAGCGCTaGTGGTCCCCGTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYKVEKR*WSPWRA Trigger: TGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTT...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR TCA 90 bp | CTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGCACTGTTCTGATTGCTaGAGTGAGTTGCTAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPQPQECNGKEKMWQARWHCSDC*SELLEK Trigger: CTTCTCTAGCAACTCACTTCAGCAATCAGAACAGTG...CCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCACCGCTACGGCCAGTCTaGTGGTGGCTCTGCACTATC | + |
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Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPPLRPV*WWLCTI Trigger: GATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGG...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATCATGGCAACACTTGCTaGAGTCTGGGGGCAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYHGNTC*SLGAVL Trigger: GAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATG...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCACTCCATGGCAACACTTaGTGCAGTCTGGGGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPLHGNT*CSLGAV Trigger: GACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAG...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GCCATTAGAATGAGTAGCAGTGTGACCAATGCAACACTTAAATGCTCCATAAAGTCTCCTTTGGGGCCATaGTGCCCCCGTTCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AIRMSSSVTNATLKCSIKSPLGP*CPRSPR Trigger: TCGAGGAGAACGGGGGCAGCATGGCCCCAAAGGAGA...CTTTATGGAGCATTTAAGTGTTGCATTGGTCACACTGCTACTCATTCTAATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTTGGTTGACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTGTGGAGAAGCGCTGGTaGTCCCCGTGGAGGGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ENLVDSKANITFKQSTKTVEKRW*SPWRAP Trigger: CGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCAC...AGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTCAACCAAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCTCCAGCCCCCAAATTATGTTACTATCTGTGTCAACTTATAGCAGGTAGCGCCATGAATGCAATCTaGAGTTCTGGTGGCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPAPKLCYYLCQLIAGSAMNAI*SSGGTP Trigger: AGGGGTGCCACCAGAACTGCAGATTGCATTCATGGC...GCTACCTGCTATAAGTTGACACAGATAGTAACATAATTTGGGGGCTGGAGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTCCTCTACGTCCTCATaGTTCATCATGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRNAMAKRRCGKPDGRKVSSTSS*FIMLKV Trigger: CACCTTCAGCATGATGAAGCATGAGGACGTAGAGGA...AACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAAGACTTCATCTCCTTTaGCCAACTTCAGCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKRLHLL*PTSALH Trigger: ATGCAGTGCTGAAGTTGGCCAAAGGAGATGAAGTCT...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTTGGTTGACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCGCTGGTGGTCCCCGTaGAGGGCACCGTTGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ENLVDSKANITFKQSTKTRWWSP*RAPLPI Trigger: AATGGGCAACGGTGCCCTCCACGGGGACCACCAGCG...AGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTCAACCAAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTCACTGTTCTGATTGCTaGAGTGAGTTGCTAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRNAMAKRRCGKPDGRKVHCSDC*SELLEK Trigger: CTTCTCTAGCAACTCACTTCAGCAATCAGAACAGTG...AACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAACAAATCTCCCAGTCATaGCATCGAAGAAGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPRNAMAKRRCGKPDGRKQISQS*HRRSFQ Trigger: TTGGAAACTTCTTCGATGTCATGACTGGGAGATTTG...TTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGAGTTGCTGGATGTATCTaGTTTTCCCTTTGTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ALPQPQECNGKEKMWQARVAGCI*FSLCFI Trigger: TATGAAACAAAGGGAAAATCAGATACATCCAGCAAC...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | CTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGTTGCTGGATGTATCTaGTTTTCCCTTTGTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LPQPQECNGKEKMWQARWVAGCI*FSLCFI Trigger: TATGAAACAAAGGGAAAATCAGATACATCCAGCAAC...CCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR GCA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGCATGGCAACACTTGCTaGAGTCTGGGGGCAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VMDLINGIHFTLHPFVCLHGNTC*SLGAVL Trigger: GAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATG...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR GCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCCTCCATGGCAACACTTaGTGCAGTCTGGGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCLHGNT*CSLGAV Trigger: GACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAG...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCCTACGGCCAGTCTGCTaGTGGCTCTGCACTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCLRPVC*WLCTIL Trigger: CAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAG...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATATCTGCAAGTCTAAGCCAGAATGGGTTGATCTaGGCTAGGTCCTCTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: REDVASQMGEKFISASLSQNGLI*ARSSTS Trigger: TGAGGTAGAGGACCTAGCCCAGATCAACCCATTCTG...GCTTAGACTTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGCAGTCCTCCAGCTTGTaGAGACTGGCCCCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VMDLINGIHFTLHPFVCLQSSSL*RLAPEW Trigger: CCATTCTGGGGCCAGTCTCCACAAGCTGGAGGACTG...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| 3UTR CAA 72 bp | AACTTCTGTACTATATCAGCCTCATCTTACCTCAGCTaGTTGTACAGAGTCAAGAGAGCTCTACCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFCTISASSYLS*LYRVKRALPQP Trigger: GGGCTGTGGTAGAGCTCTCTTGACTCTGTACAACAAGCTGAGGTAAGATGAGGCTGATATAGTACAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATCATAGCTGTACATGCTaGAGACTGTGTTGCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYHSCTC*RLCCRC Trigger: ACAACGGCAACACAGTCTTCAGCATGTACAGCTATG...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCATTGCTAGAGAAGCCATaGATGCAATCTGCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPLLEKP*MQSAVL Trigger: CAGAACTGCAGATTGCATTCATGGCTTCTCTAGCAA...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR GCA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGAAAGAGCAGAAAGCCTaGGAAGGTGGAGAAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMDLINGIHFTLHPFVCLKEQKA*EGGEAL Trigger: CAGCGCTTCTCCACCTTCGCAGGCTTTCTGCTCTTT...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCATTCCCATTGTTTCCATaGTTTCCTGGAATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPFPLFP*FPGMPG Trigger: TCCTGGCATTCCAGGAAACCATGGAAACAATGGGAA...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATAGACTTCATCTCCTTTaGCCAACTTCAGCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYRLHLL*PTSALH Trigger: ATGCAGTGCTGAAGTTGGCCAAAGGAGATGAAGTCT...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR TCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCGAAGAAATACACACCTaGTACGGGGGCCCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCEEIHT*YGGPKS Trigger: AGATTTGGGGCCCCCGTATCAGGTGTGTATTTCTTC...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCAACTGTGTTGCCGTTGTaGATAAGGTACACATACACT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPTVLPL*IRYTYT Trigger: AGTGTATGTGTACCTTATGCACAACGGCAACACAGT...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CCA 90 bp | TTACCTTGTGGTCTATTCTTAGCCCCTGAAGCATCCAACATTATTGGTATGCCAAACTTCAGCACTGCATaGTTGCTGGATGTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGLFLAPEASNIIGMPNFSTA*LLDVSD Trigger: ATCAGATACATCCAGCAACCATGCAGTGCTGAAGTT...TGGCATACCAATAATGTTGGATGCTTCAGGGGCTAAGAATAGACCACAAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR TCA 90 bp | GAAAACTTGGTTGACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTGAAGAAATACACACCTaGTACGGGGGCCCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ENLVDSKANITFKQSTKTEEIHT*YGGPKS Trigger: AGATTTGGGGCCCCCGTATCAGGTGTGTATTTCTTC...AGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTCAACCAAGTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR TCA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGCATAGCTGTACATGCTaGAGACTGTGTTGCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VMDLINGIHFTLHPFVCLHSCTC*RLCCRC Trigger: ACAACGGCAACACAGTCTTCAGCATGTACAGCTATG...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCTCCTCTACGTCCTCATaGTTCATCATGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCSSTSS*FIMLKV Trigger: CACCTTCAGCATGATGAAGCATGAGGACGTAGAGGA...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCTTCCCATTGTTTCCATaGTTTCCTGGAATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCFPLFP*FPGMPG Trigger: TCCTGGCATTCCAGGAAACCATGGAAACAATGGGAA...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR GCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCACTGTGTTGCCGTTGTaGATAAGGTACACATACACT | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCTVLPL*IRYTYT Trigger: AGTGTATGTGTACCTTATGCACAACGGCAACACAGT...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CCA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCAACTTCAGCACTGCATaGTTGCTGGATGTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKANITFKQSTKTLCKCNFSTA*LLDVSD Trigger: ATCAGATACATCCAGCAACCATGCAGTGCTGAAGTT...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS CCA 90 bp | GGCAGTCCTCCAGCTTGTGGAGACTGGCCCCAGAATGGGTTGATCTaGGCTAGGTCCTCTACCTCAGGGTGCGGAAGCGCCTCTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPPACGDWPQNGLI*ARSSTSGCGSASGL Trigger: GAGACCAGAGGCGCTTCCGCACCCTGAGGTAGAGGACCTAGCCCAGATCAACCCATTCTGGGGCCAGTCTCCACAAGCTGGAGGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | ACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTGCTGGTGGCTCTaGACTATCCTGGCCACCGCTTTATTAGCTCTTCTGCTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFSLLEPLRPVCWWL*TILATALLALLLTS Trigger: GGAGGTGAGCAGAAGAGCTAATAAAGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | GGGGCCCTTGGTAACCACGAAATCCATAATCTCCATGGCAACACTTaGTGCAGTCTGGGGGCAGTCCTCCAGCTTGTGGAGACTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GALGNHEIHNLHGNT*CSLGAVLQLVETGP Trigger: GGGGCCAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTACCAAGGGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | CTCTGCTCTCTCACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTaGTGGTGGCTCTGCACTATCCTGGCCACCGCTTTATTAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCSLTFSLLEPLRPV*WWLCTILATALLAL Trigger: AAGAGCTAATAAAGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAGAGAGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS CCA 90 bp | AAGAGCAGAAAGCCTGCGAAGGTGGAGAAGCGCTGGTGGTCCCCGTaGAGGGCACCGTTGCCCATTCTTAGCCAGACTTCATCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRKPAKVEKRWWSP*RAPLPILSQTSSPL Trigger: CAAAGGAGATGAAGTCTGGCTAAGAATGGGCAACGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTTCGCAGGCTTTCTGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | GCCCTTGGTAACCACGAAATCCATAATCTCCATGGCAACACTTGCTaGAGTCTGGGGGCAGTCCTCCAGCTTGTGGAGACTGGCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALGNHEIHNLHGNTC*SLGAVLQLVETGPR Trigger: TCTGGGGCCAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTACCAAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | GGGGCCCTTGGTAACCACGAAATCCATAATCTCCATGGCAACACTTaGTGCAGTCTGGGGGCAGTCCTCCAGCTTGTGGAGACTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: GALGNHEIHNLHGNT*CSLGAVLQLVETPC Trigger: ACATGGAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTACCAAGGGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
||
| CDS CCA 90 bp | TTAGTTTCAAAGAGCAGAAAGCCTGCGAAGGTGGAGAAGCGCTGGTaGTCCCCGTGGAGGGCACCGTTGCCCATTCTTAGCCAGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSKSRKPAKVEKRW*SPWRAPLPILSQTS Trigger: TGAAGTCTGGCTAAGAATGGGCAACGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTTCGCAGGCTTTCTGCTCTTTGAAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CAA 90 bp | TACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGTCTCCATGGCAACACTaGCTGCAGTCTGGGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YHSPRNAMAKRRCGKPDGSPWQH*LQSGGS Trigger: ACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGA...CCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
||
| CDS-3UTR CAA 90 bp | CTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGTGGCCCCAGAATGGGTaGATCTGGGCTAGGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPQPQECNGKEKMWQARWWPQNG*IWARSS Trigger: AGAGGACCTAGCCCAGATCAACCCATTCTGGGGCCA...CCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTGGGCAGTCCTCCAGCTaGTGGAGACTGGCCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRNAMAKRRCGKPDGRKVGQSSS*WRLAPE Trigger: TTCTGGGGCCAGTCTCCACAAGCTGGAGGACTGCCC...AACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS GCA 90 bp | GCCCTTGGTAACCACGAAATCCATAATCTCCATGGCAACACTTGCTaGAGTCTGGGGGCAGTCCTCCAGCTTGTGGAGACTCCATGTATT | + |
|
Preference number: 5 (lower is better) Translates to: ALGNHEIHNLHGNTC*SLGAVLQLVETPCI Trigger: AATACATGGAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTACCAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
||
| CDS GCA 90 bp | TCTGTAGAAGTGTTATTATCCACAGTCCCAGTTTTAGCTTGGCTCTaGTCTCTCACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVEVLLSTVPVLAWL*SLTFSLLEPLRPVC Trigger: GCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAGAGAGCAGAGCCAAGCTAAAACTGGGACTGTGGATAATAACACTTCTACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
||
| CDS CCA 90 bp | TCCAGCTTGTGGAGACTCCATGTATTCATCTTGACACAGGCAAAATaGGAGGAAAAGCAAAGGCAGCAGGTGCCACCAGATGCGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLWRLHVFILTQAK*EEKQRQQVPPDALP Trigger: AGGCAGCGCATCTGGTGGCACCTGCTGCCTTTGCTTTTCCTCCCATTTTGCCTGTGTCAAGATGAATACATGGAGTCTCCACAAGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
||
| CDS-3UTR CAA 90 bp | GCTCTACCACAGCCCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGCCAGTAGCTCCATaGTTCCCATTGTTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPQPQECNGKEKMWQARWPVAP*FPLFPW Trigger: CCATGGAAACAATGGGAACAATGGAGCTACTGGCCA...TCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGGGCTGTGGTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CCA 90 bp | GTAACCACGAAATCCATAATCTCCATGGCAACACTTGCTGCAGTCTaGGGGCAGTCCTCCAGCTTGTGGAGACTCCATGTATTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: VTTKSIISMATLAAV*GQSSSLWRLHVFIL Trigger: CAAGATGAATACATGGAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| CDS CCA 90 bp | TTTAGGTCTGTAGAAGTGTTATTATCCACAGTCCCAGTTTTAGCTTaGCTCTGCTCTCTCACTTTCTCCCTCCTGGAGCCGCTACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FRSVEVLLSTVPVLA*LCSLTFSLLEPLRP Trigger: TGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAGAGAGCAGAGCCAAGCTAAAACTGGGACTGTGGATAATAACACTTCTACAGACCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTAAGGTGACACGTGAACGCTGGGCAGCAAAAGTCAGTCCTCTGGGAAACAAGAAGTTTCCAATGTaGGTCTCAACACTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GCKVTRERWAAKVSPLGNKKFPM*VSTLLK Trigger: CTTCAGCAGTGTTGAGACCAACATTGGAAACTTCTT...GTTTCCCAGAGGACTGACTTTTGCTGCCCAGCGTTCACGTGTCACCTTACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| CDS-3UTR CAA 90 bp | AGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATATCTGCAAGTCTAAGCGGGCCTAGGTCGCCTTaGTCTCCTTTCTCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: REDVASQMGEKFISASLSGPRSP*SPFSPL Trigger: CAAAGGTGAGAAAGGAGACAAAGGCGACCTAGGCCC...GCTTAGACTTGCAGATATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATGGGCCTAGGTCGCCTTaGTCTCCTTTCTCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYGPRSP*SPFSPL Trigger: CAAAGGTGAGAAAGGAGACAAAGGCGACCTAGGCCC...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTATGCTGAAGACTGTGTaGCCGTTGTGCATAAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: PRNAMAKRRCGKPDGRKVMLKTV*PLCIRY Trigger: GTACCTTATGCACAACGGCAACACAGTCTTCAGCAT...AACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTAGTCCCAGTTTTAGCTaGGCTCTGCTCTCTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: PRNAMAKRRCGKPDGRKVSPSFS*ALLSHF Trigger: AAAGTGAGAGAGCAGAGCCAAGCTAAAACTGGGACT...AACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS GCA 90 bp | TTGCCGTTGTGCATAAGGTACACATACACTTCCTCTACGTCCTCATaGTTCATCATGCTGAAGGTGAAGAAATACACACCTGATACGGGG | + |
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Preference number: 5 (lower is better) Translates to: LPLCIRYTYTSSTSS*FIMLKVKKYTPDTG Trigger: CCCCGTATCAGGTGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAGGACGTAGAGGAAGTGTATGTGTACCTTATGCACAACGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGTCTCCATGGCAACACTaGCTGCAGTCTGGGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VMDLINGIHFTLHPFVCLSPWQH*LQSGGS Trigger: ACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGA...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATGCTCCATTGTTCCCATaGTTTCCATGGTTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYAPLFP*FPWFPG Trigger: TCCAGGAAACCATGGAAACAATGGGAACAATGGAGC...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | AGGAATGCAATGGCAAAGAGAAGATGTGGCAAGCCAGATGGGAGAAAAGTTTATAAGACTGTGTTGCCGTaGTGCATAAGGTACACATAC | + |
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Preference number: 5 (lower is better) Translates to: RNAMAKRRCGKPDGRKVYKTVLP*CIRYTY Trigger: GTATGTGTACCTTATGCACAACGGCAACACAGTCTT...ATAAACTTTTCTCCCATCTGGCTTGCCACATCTTCTCTTTGCCATTGCATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GCCATTAGAATGAGTAGCAGTGTGACCAATGCAACACTTAAATGCTCCATAAAGAAGACTGTGTTGCCGTaGTGCATAAGGTACACATAC | + |
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Preference number: 5 (lower is better) Translates to: AIRMSSSVTNATLKCSIKKTVLP*CIRYTY Trigger: GTATGTGTACCTTATGCACAACGGCAACACAGTCTT...CTTTATGGAGCATTTAAGTGTTGCATTGGTCACACTGCTACTCATTCTAATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GTTATGGATCTCATAAATGGAATACACTTTACTTTGCATCCATTTGTCTGCCTGATGCTGAAGACTGTGTaGCCGTTGTGCATAAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: VMDLINGIHFTLHPFVCLMLKTV*PLCIRY Trigger: GTACCTTATGCACAACGGCAACACAGTCTTCAGCAT...CAGGCAGACAAATGGATGCAAAGTAAAGTGTATTCCATTTATGAGATCCATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTTGGTTGACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTGCTCCATTGTTCCCATaGTTTCCATGGTTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ENLVDSKANITFKQSTKTAPLFP*FPWFPG Trigger: TCCAGGAAACCATGGAAACAATGGGAACAATGGAGC...AGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTCAACCAAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCAAGAAGTTTCCAATGTaGGTCTCAACACTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: DSKANITFKQSTKTLCKCKKFPM*VSTLLK Trigger: CTTCAGCAGTGTTGAGACCAACATTGGAAACTTCTT...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS-3UTR CAA 90 bp | GACTCGAAAGCCAATATTACATTTAAACAGAGCACCAAAACTCTATGCAAATGCTTCAGCACTGCATGGTaGCTGGATGTATCTGATTTT | + |
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Preference number: 5 (lower is better) Translates to: DSKANITFKQSTKTLCKCFSTAW*LDVSDF Trigger: AAAATCAGATACATCCAGCAACCATGCAGTGCTGAA...GCATTTGCATAGAGTTTTGGTGCTCTGTTTAAATGTAATATTGGCTTTCGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CCA 72 bp | CCAGCTTGTGGAGACTGGCCCCAGAATGGGTTGATCTaGGCTAGGTCCTCTACCTCAGGGTGCGGAAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PACGDWPQNGLI*ARSSTSGCGSA Trigger: GGCGCTTCCGCACCCTGAGGTAGAGGACCTAGCCCAGATCAACCCATTCTGGGGCCAGTCTCCACAAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS GCA 72 bp | CTCACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTaGTGGTGGCTCTGCACTATCCTGGCCACCGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LTFSLLEPLRPV*WWLCTILATAL Trigger: TAAAGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS CCA 72 bp | AAGCCTGCGAAGGTGGAGAAGCGCTGGTGGTCCCCGTaGAGGGCACCGTTGCCCATTCTTAGCCAGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: KPAKVEKRWWSP*RAPLPILSQTS Trigger: TGAAGTCTGGCTAAGAATGGGCAACGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTTCGCAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CCA 72 bp | AAGAGCAGAAAGCCTGCGAAGGTGGAGAAGCGCTGGTaGTCCCCGTGGAGGGCACCGTTGCCCATTCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: KSRKPAKVEKRW*SPWRAPLPILS Trigger: GCTAAGAATGGGCAACGGTGCCCTCCACGGGGACCACCAGCGCTTCTCCACCTTCGCAGGCTTTCTGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS GCA 72 bp | CTCCTGGAGCCGCTACGGCCAGTCTGCTGGTGGCTCTaGACTATCCTGGCCACCGCTTTATTAGCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLEPLRPVCWWL*TILATALLALL Trigger: CAGAAGAGCTAATAAAGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS CCA 72 bp | TTCTCCCTCCTGGAGCCGCTACGGCCAGTCTGCTGGTaGCTCTGCACTATCCTGGCCACCGCTTTATTAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSLLEPLRPVCW*LCTILATALLA Trigger: AGCTAATAAAGCGGTGGCCAGGATAGTGCAGAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS CCA 72 bp | AAATCCATAATCTCCATGGCAACACTTGCTGCAGTCTaGGGGCAGTCCTCCAGCTTGTGGAGACTGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: KSIISMATLAAV*GQSSSLWRLAP Trigger: TGGGGCCAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110523.2 |
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| CDS GCA 72 bp | GGTAACCACGAAATCCATAATCTCCATGGCAACACTTaGTGCAGTCTGGGGGCAGTCCTCCAGCTTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GNHEIHNLHGNT*CSLGAVLQLVE Trigger: CTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CAA 90 bp | TTCTCACCTTTGGCCCCTTCATGGCCAGTAGCTCCATTGTTCCCATaGTTTCCATGGTTTCCTGGAATGCCAGGAGGACCTGGAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSPLAPSWPVAPLFP*FPWFPGMPGGPGGP Trigger: TGGACCTCCAGGTCCTCCTGGCATTCCAGGAAACCATGGAAACAATGGGAACAATGGAGCTACTGGCCATGAAGGGGCCAAAGGTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS GCA 72 bp | AACCACGAAATCCATAATCTCCATGGCAACACTTGCTaGAGTCTGGGGGCAGTCCTCCAGCTTGTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: NHEIHNLHGNTC*SLGAVLQLVET Trigger: AGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTTCGTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CAA 72 bp | TTGGCCCCTTCATGGCCAGTAGCTCCATTGTTCCCATaGTTTCCATGGTTTCCTGGAATGCCAGGAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: LAPSWPVAPLFP*FPWFPGMPGGP Trigger: AGGTCCTCCTGGCATTCCAGGAAACCATGGAAACAATGGGAACAATGGAGCTACTGGCCATGAAGGGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CCA 72 bp | AAATCCATAATCTCCATGGCAACACTTGCTGCAGTCTaGGGGCAGTCCTCCAGCTTGTGGAGACTCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: KSIISMATLAAV*GQSSSLWRLHV Trigger: TACATGGAGTCTCCACAAGCTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGCCATGGAGATTATGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022853.15 |
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| CDS CCA 72 bp | CATCTCCTTTGGCCAACTTCAGCACTGCATGGTTGCTaGATGTATCTGATTTTCCCTTTGTTTCATAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HLLWPTSALHGC*MYLIFPLFHSC Trigger: ACAGCTATGAAACAAAGGGAAAATCAGATACATCCAGCAACCATGCAGTGCTGAAGTTGGCCAAAGGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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| CDS CCA 72 bp | CAGACTTCATCTCCTTTGGCCAACTTCAGCACTGCATaGTTGCTGGATGTATCTGATTTTCCCTTTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QTSSPLANFSTA*LLDVSDFPFVS Trigger: TGAAACAAAGGGAAAATCAGATACATCCAGCAACCATGCAGTGCTGAAGTTGGCCAAAGGAGATGAAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022853.15 ENSMUST00000110523.2 |
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