Pregenerated sensors for C1QTNF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046491Ensembl transcript IDs: ENSMUST00000057679.10, ENSMUST00000151912.2, ENSMUST00000173002.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCACTTGGCTCGGCTACTaGCGCAGCTGCAGGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGTWLGY*RSCRGL Trigger: CAGGCCCCTGCAGCTGCGGCAGTAGCCGAGCCAAGT...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCGGATCCTGGTGCTCCTaGAGGGCCAGGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGGSWCS*RARWAL Trigger: CAAGGCCCACCTGGCCCTCCAGGAGCACCAGGATCC...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCCTCGAGGGCCAGCTCTaGCAATGGCCCCAGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGLEGQL*QWPQLC Trigger: GCAAAGCTGGGGCCATTGGCAGAGCTGGCCCTCGAG...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCTCGAGGGCCAGCTCTaGCAATGGCCCCAGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLLEGQL*QWPQLC Trigger: GCAAAGCTGGGGCCATTGGCAGAGCTGGCCCTCGAG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGTTGCCCGGTGTGCCATaGTTCCCGGGGGTACCACTG | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLLPGVP*FPGVPL Trigger: CAGTGGTACCCCCGGGAAGCATGGCACACCGGGCAA...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCCTTCTTGCCCGGTGTaGCATGCTTCCCGGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLPSCPV*HASRGY Trigger: GTACCCCCGGGAAGCATGGCACACCGGGCAAGAAGG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCAGGCAGTCGCTCGCGTaGGTAGCTCTTGGTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGRQSLA*VALGYR Trigger: GCGGTAACCAAGAGCTACCCACGCGAGCGACTGCCT...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCCCGAGGCCACGTCGTaGTTGCCCGTGTTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLPEATS*LPVLAS Trigger: TGATGCCAACACGGGCAACCACGACGTGGCCTCGGG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGTCCCGGGGGTACCACTaGCCCCCTTGGGTCCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVESRGYH*PPWVLE Trigger: CTCGAGGACCCAAGGGGGTCAGTGGTACCCCCGGGA...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCGCCTGTCCTGCCAGGTaGACCTTCTTCTCCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGACPAR*TFFSTV Trigger: GACAGTGGAGAAGAAGGTCCACCTGGCAGGACAGGC...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTGTGCACCAGGCCGATaGCCAGGTGTTTGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGCAPGR*PGVCWP Trigger: TGGCCAACAAACACCTGGCCATCGGCCTGGTGCACA...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCCGCTGCAGACGAACTTaGCACTGGACGCGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGRCRRT*HWTRCS Trigger: ACTACAACGCGTCCAGTGGCAAGTTCGTCTGCAGCG...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTTCCCGGGGGTACCACTaGCCCCCTTGGGTCCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSSRGYH*PPWVLE Trigger: CTCGAGGACCCAAGGGGGTCAGTGGTACCCCCGGGA...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCCTTCTGGAAGTCCCTaGGAGCAAAGGCACCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLPSGSP*EQRHQA Trigger: TGCTTGGTGCCTTTGCTCGCAGGGACTTCCAGAAGG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCTTGTTTTCCACGGTTaGCTGTCCTGCCAGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLLVFHG*LSCQVD Trigger: GTCCACCTGGCAGGACAGGCAACCGTGGAAAACAAG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGCCTTCTTGCCCGGTGTaGCATGCTTCCCGGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEPSCPV*HASRGY Trigger: GTACCCCCGGGAAGCATGGCACACCGGGCAAGAAGG...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGCCCGAGGCCACGTCGTaGTTGCCCGTGTTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRPEATS*LPVLAS Trigger: TGATGCCAACACGGGCAACCACGACGTGGCCTCGGG...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGGGACCAGGCAGGCTaGAAACTAGTTGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEGDQAG*KLVEDP Trigger: GGGGTCCTCAACTAGTTTGCAGCCTGCCTGGTCCCC...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTACTTGGCTCGGCTACTaGCGCAGCTGCAGGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSTWLGY*RSCRGL Trigger: CAGGCCCCTGCAGCTGCGGCAGTAGCCGAGCCAAGT...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGTGTTCAGTCCTGCCTaGAGCAGCCAGAGATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEVFSPA*SSQRCR Trigger: CCGGCATCTCTGGCTGCTGCAGGCAGGACTGAACAC...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGAAAGGCACCAAGCATTaGGTCAGCAGCACACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLKGTKH*VSSTRK Trigger: CTTCCGTGTGCTGCTGACCCAATGCTTGGTGCCTTT...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCGGATCCTGGTGCTCCTaGAGGGCCAGGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPGSWCS*RARWAL Trigger: CAAGGCCCACCTGGCCCTCCAGGAGCACCAGGATCC...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGCACGGTTGCCTGTCCTaGCAGGTGGACCTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEHGCLS*QVDLLL Trigger: GAGAAGAAGGTCCACCTGGCAGGACAGGCAACCGTG...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTTTGCCCGGTGTGCCATaGTTCCCGGGGGTACCACTG | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSLPGVP*FPGVPL Trigger: CAGTGGTACCCCCGGGAAGCATGGCACACCGGGCAA...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAAGATCCCCGGCACGCTaGAGACGAACTTGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPRSPAR*RRTCHW Trigger: CCAGTGGCAAGTTCGTCTGCAGCGTGCCGGGGATCT...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCCCCGGTCTCCGTCCTaGCCATCTTGGCCGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPPRSPS*PSWPSF Trigger: GAAAGACGGCCAAGATGGCCAGGACGGAGACCGGGG...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGCGCGTGGGTAGCTCTTaGTTACCGCCACGGAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRRVGSS*LPPRKR Trigger: CCTTTTCCGTGGCGGTAACCAAGAGCTACCCACGCG...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAAGGCAGTCGCTCGCGTaGGTAGCTCTTGGTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPRQSLA*VALGYR Trigger: GCGGTAACCAAGAGCTACCCACGCGAGCGACTGCCT...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCTCTTCCCACCACTCCTaGGGATCCTGGTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPSSHHS*GSWCSW Trigger: CCAGGAGCACCAGGATCCTCAGGAGTGGTGGGAAGA...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTTCTTCCCACCACTCCTaGGGATCCTGGTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSSSHHS*GSWCSW Trigger: CCAGGAGCACCAGGATCCTCAGGAGTGGTGGGAAGA...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCGTCCGAATGCGGTACTaGCCATTGTGCACCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPVRMRY*PLCTRP Trigger: CGGCCTGGTGCACAATGGTCAGTACCGCATTCGGAC...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGCCTTCTGGAAGTCCCTaGGAGCAAAGGCACCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRPSGSP*EQRHQA Trigger: TGCTTGGTGCCTTTGCTCGCAGGGACTTCCAGAAGG...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTGGGGACCAGGCAGGCTaGAAACTAGTTGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSGDQAG*KLVEDP Trigger: GGGGTCCTCAACTAGTTTGCAGCCTGCCTGGTCCCC...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGCTTGTTTTCCACGGTTaGCTGTCCTGCCAGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRLVFHG*LSCQVD Trigger: GTCCACCTGGCAGGACAGGCAACCGTGGAAAACAAG...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTAGATCCCCGGCACGCTaGAGACGAACTTGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSRSPAR*RRTCHW Trigger: CCAGTGGCAAGTTCGTCTGCAGCGTGCCGGGGATCT...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGCCTGTCCTGCCAGGTaGACCTTCTTCTCCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPACPAR*TFFSTV Trigger: GACAGTGGAGAAGAAGGTCCACCTGGCAGGACAGGC...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCACGCTGCAGACGAACTTaGCACTGGACGCGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPRCRRT*HWTRCS Trigger: ACTACAACGCGTCCAGTGGCAAGTTCGTCTGCAGCG...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAAGGCCACGTCGTGGTTaGCCGTGTTGGCATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPRPRRG*PCWHQK Trigger: CTTTTGATGCCAACACGGGCAACCACGACGTGGCCT...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGAAAGGCACCAAGCATTaGGTCAGCAGCACACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEKGTKH*VSSTRK Trigger: CTTCCGTGTGCTGCTGACCCAATGCTTGGTGCCTTT...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCGCGTGGGTAGCTCTTaGTTACCGCCACGGAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPRVGSS*LPPRKR Trigger: CCTTTTCCGTGGCGGTAACCAAGAGCTACCCACGCG...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTTGTGCACCAGGCCGATaGCCAGGTGTTTGTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSCAPGR*PGVCWP Trigger: TGGCCAACAAACACCTGGCCATCGGCCTGGTGCACA...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR TCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCTTCATCACCCTCCTTaGGAGCTAGGATGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPLHHPP*ELGWWS Trigger: GCTCCACCATCCTAGCTCTCAAGGAGGGTGATGAAG...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGCAATGGCCCCAGCTTTaGCCTTTGGTCCTTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRQWPQL*PLVLVF Trigger: GAAAACAAGGACCAAAGGGCAAAGCTGGGGCCATTG...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCAGGCCACGTCGTGGTTaGCCGTGTTGGCATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPRPRRG*PCWHQK Trigger: CTTTTGATGCCAACACGGGCAACCACGACGTGGCCT...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCAGACGAACTTGCCACTaGACGCGTTGTAGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IEEACLGIKDPKIVSPQPRRTCH*TRCSGH Trigger: GTGGCCACTACAACGCGTCCAGTGGCAAGTTCGTCT...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTAGACGAACTTGCCACTaGACGCGTTGTAGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSRRTCH*TRCSGH Trigger: GTGGCCACTACAACGCGTCCAGTGGCAAGTTCGTCT...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGTACCCAGGAGATCATaGTTGTCACCTTCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEVPRRS*LSPSVH Trigger: GTGCACAGAAGGTGACAACCATGATCTCCTGGGTAC...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCACAATGGCCCCAGCTTTaGCCTTTGGTCCTTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPQWPQL*PLVLVF Trigger: GAAAACAAGGACCAAAGGGCAAAGCTGGGGCCATTG...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS GCA 90 bp | TCACCTTCTGTGCACCGAGCCACATCCAGGGCCATCCGACGTCGCTaGTCCGGTGGTGTTCAGTCCTGCCTGCAGCAGCCAGAGATGCCG | + |
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Preference number: 5 (lower is better) Translates to: SPSVHRATSRAIRRR*SGGVQSCLQQPEMP Trigger: CGGCATCTCTGGCTGCTGCAGGCAGGACTGAACACCACCGGAGCAGCGACGTCGGATGGCCCTGGATGTGGCTCGGTGCACAGAAGGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS GCA 90 bp | ACATCCAGGGCCATCCGACGTCGCTGCTCCGGTGGTGTTCAGTCCTaGCTGCAGCAGCCAGAGATGCCGGCCCCAGGCATAGTTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TSRAIRRRCSGGVQS*LQQPEMPAPGIVFP Trigger: TGGGAAAACTATGCCTGGGGCCGGCATCTCTGGCTGCTGCAGGCAGGACTGAACACCACCGGAGCAGCGACGTCGGATGGCCCTGGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS GCA 90 bp | GGCACAGGCCAAGAGTACCCAGGAGATCATGGTTGTCACCTTCTGTaGACCGAGCCACATCCAGGGCCATCCGACGTCGCTGCTCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: GTGQEYPGDHGCHLL*TEPHPGPSDVAAPV Trigger: CACCGGAGCAGCGACGTCGGATGGCCCTGGATGTGGCTCGGTGCACAGAAGGTGACAACCATGATCTCCTGGGTACTCTTGGCCTGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS CCA 90 bp | GAGCTAGGATGGTGGAGCCCGAGGCCACGTCGTGGTTGCCCGTGTTaGCATCAAAAGTCCGAATGCGGTACTGACCATTGTGCACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: ELGWWSPRPRRGCPC*HQKSECGTDHCAPG Trigger: GCCTGGTGCACAATGGTCAGTACCGCATTCGGACTTTTGATGCCAACACGGGCAACCACGACGTGGCCTCGGGCTCCACCATCCTAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCCCCAGCTTTGCCCTTaGGTCCTTGTTTTCCACGGT | + |
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Preference number: 5 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLPQLCP*VLVFHG Trigger: ACCGTGGAAAACAAGGACCAAAGGGCAAAGCTGGGG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCCGATGGCCAGGTGTTaGTTGGCCAGCGTAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLPMARC*LASVMS Trigger: TGACATTACGCTGGCCAACAAACACCTGGCCATCGG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTCGTGGTTGCCCGTGTaGGCATCAAAAGTCCGAATG | + |
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Preference number: 5 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGSWLPV*ASKVRM Trigger: CATTCGGACTTTTGATGCCAACACGGGCAACCACGA...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCACTTCATCACCCTCCTaGAGAGCTAGGATGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGTSSPS*RARMVE Trigger: CTCCACCATCCTAGCTCTCAAGGAGGGTGATGAAGT...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGCTCGTTGGGGTCTCCTaGGTCAGCGTAGATGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLLVGVS*VSVDEE Trigger: TTCCTCATCTACGCTGACCAAGGAGACCCCAACGAG...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGTCGTGGTTGCCCGTGTaGGCATCAAAAGTCCGAATG | + |
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Preference number: 5 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLSWLPV*ASKVRM Trigger: CATTCGGACTTTTGATGCCAACACGGGCAACCACGA...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCAGAATCTTGTCAAACTaGATAGGCAGTCGCTCGCGT | + |
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Preference number: 5 (lower is better) Translates to: SSRHPRRLLVPTSRLNPGRILSN*IGSRSR Trigger: ACGCGAGCGACTGCCTATCAAGTTTGACAAGATTCT...GCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTCCCTTAGGTCCCTTCTaGCCCGGTGTGCCATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSPLGPF*PGVPCF Trigger: GAAGCATGGCACACCGGGCAAGAAGGGACCTAAGGG...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGCCAGGCTCCCCTTTTTaGCCCTTAGGTCCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLPGNKRSQDCQSTAPVEPGSPF*PLGPFL Trigger: CAAGAAGGGACCTAAGGGCAAAAAAGGGGAGCCTGG...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS CCA 90 bp | CTCGTTCATCAGAATCTTGTCAAACTTGATAGGCAGTCGCTCGCGTaGGTAGCTCTTGGTTACCGCCACGGAAAAGGCCGACTTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LVHQNLVKLDRQSLA*VALGYRHGKGRLGS Trigger: CGAGCCAAGTCGGCCTTTTCCGTGGCGGTAACCAAGAGCTACCCACGCGAGCGACTGCCTATCAAGTTTGACAAGATTCTGATGAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCGAGGCCACGTCGTGGTaGCCCGTGTTGGCATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: IEEACLGIKDPKIVSPQPEATSW*PVLASK Trigger: TTTTGATGCCAACACGGGCAACCACGACGTGGCCTC...GGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGACTTCATCACCCTCCTaGAGAGCTAGGATGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRTSSPS*RARMVE Trigger: CTCCACCATCCTAGCTCTCAAGGAGGGTGATGAAGT...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCACTCGTTGGGGTCTCCTaGGTCAGCGTAGATGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RGGLPGNKRSQDCQSTAPLVGVS*VSVDEE Trigger: TTCCTCATCTACGCTGACCAAGGAGACCCCAACGAG...TGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTCCCCAGCTTTGCCCTTaGGTCCTTGTTTTCCACGGT | + |
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Preference number: 5 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSPQLCP*VLVFHG Trigger: ACCGTGGAAAACAAGGACCAAAGGGCAAAGCTGGGG...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTCCAGGCTCCCCTTTTTaGCCCTTAGGTCCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSPGSPF*PLGPFL Trigger: CAAGAAGGGACCTAAGGGCAAAAAAGGGGAGCCTGG...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGGATCTCCGATGGCCAGGTGTTaGTTGGCCAGCGTAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: PGNKRSQDCQSTAPVEGSPMARC*LASVMS Trigger: TGACATTACGCTGGCCAACAAACACCTGGCCATCGG...AGATCCCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGGAGAATCTTGTCAAACTaGATAGGCAGTCGCTCGCGT | + |
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Preference number: 5 (lower is better) Translates to: ACLGIKDPKIVSPQPQSRRILSN*IGSRSR Trigger: ACGCGAGCGACTGCCTATCAAGTTTGACAAGATTCT...CCTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGCACCCACGCAGACTCTTAGTCCCTACCTCAAGGCTCAACCCCGGCTTGTCGTTCATCAGAATCTaGTCAAACTTGATAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SRHPRRLLVPTSRLNPGLSFIRI*SNLIGS Trigger: ACTGCCTATCAAGTTTGACAAGATTCTGATGAACGA...CAAGCCGGGGTTGAGCCTTGAGGTAGGGACTAAGAGTCTGCGTGGGTGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGCCTGGGAATAAAAGATCCCAAGATTGTCAGTCCACAGCCCCAGTCGAGTCGTTCATCAGAATCTaGTCAAACTTGATAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GLPGNKRSQDCQSTAPVESFIRI*SNLIGS Trigger: ACTGCCTATCAAGTTTGACAAGATTCTGATGAACGA...CTCGACTGGGGCTGTGGACTGACAATCTTGGGATCTTTTATTCCCAGGCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS TCA 72 bp | TCTTGCCCGGTGTGCCATGCTTCCCGGGGGTACCACTaGCCCCCTTGGGTCCTCGAGGGCCAGCTCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SCPVCHASRGYH*PPWVLEGQLCQ Trigger: TTGGCAGAGCTGGCCCTCGAGGACCCAAGGGGGTCAGTGGTACCCCCGGGAAGCATGGCACACCGGGCAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057679.10 ENSMUST00000151912.2 ENSMUST00000173002.8 |
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| CDS GCA 72 bp | GCCATCCGACGTCGCTGCTCCGGTGGTGTTCAGTCCTaGCTGCAGCAGCCAGAGATGCCGGCCCCAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: AIRRRCSGGVQS*LQQPEMPAPGI Trigger: TATGCCTGGGGCCGGCATCTCTGGCTGCTGCAGGCAGGACTGAACACCACCGGAGCAGCGACGTCGGATGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS GCA 72 bp | GTGCACCGAGCCACATCCAGGGCCATCCGACGTCGCTaGTCCGGTGGTGTTCAGTCCTGCCTGCAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VHRATSRAIRRR*SGGVQSCLQQP Trigger: TGGCTGCTGCAGGCAGGACTGAACACCACCGGAGCAGCGACGTCGGATGGCCCTGGATGTGGCTCGGTGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS CCA 72 bp | GGTAGCTCTTGGTTACCGCCACGGAAAAGGCCGACTTaGCTCGGCTACTGCCGCAGCTGCAGGGGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSSWLPPRKRPT*LGYCRSCRGLG Trigger: TCCCAGGCCCCTGCAGCTGCGGCAGTAGCCGAGCCAAGTCGGCCTTTTCCGTGGCGGTAACCAAGAGCTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS CCA 72 bp | AGCCACATCCAGGGCCATCCGACGTCGCTGCTCCGGTaGTGTTCAGTCCTGCCTGCAGCAGCCAGAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SHIQGHPTSLLR*CSVLPAAARDA Trigger: GGCATCTCTGGCTGCTGCAGGCAGGACTGAACACCACCGGAGCAGCGACGTCGGATGGCCCTGGATGTGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173002.8 |
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| CDS TCA 72 bp | GTCTTTCCCAGGGAAACCCATTCTTCCCACCACTCCTaGGGATCCTGGTGCTCCTGGAGGGCCAGGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VFPRETHSSHHS*GSWCSWRARWA Trigger: GGCCCACCTGGCCCTCCAGGAGCACCAGGATCCTCAGGAGTGGTGGGAAGAATGGGTTTCCCTGGGAAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057679.10 ENSMUST00000151912.2 ENSMUST00000173002.8 |
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| CDS GCA 72 bp | GAGCTAGGATGGTGGAGCCCGAGGCCACGTCGTGGTTaGCCGTGTTGGCATCAAAAGTCCGAATGCGGTACT | + |
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Preference number: 6 (lower is better) Translates to: ELGWWSPRPRRG*PCWHQKSECGT Trigger: AGTACCGCATTCGGACTTTTGATGCCAACACGGGCAACCACGACGTGGCCTCGGGCTCCACCATCCTAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS GCA 72 bp | CGTCGTGGTTGCCCGTGTTGGCATCAAAAGTCCGAATaGGGTACTGACCATTGTGCACCAGGCCGATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RRGCPCWHQKSE*GTDHCAPGRWP Trigger: TGGCCATCGGCCTGGTGCACAATGGTCAGTACCGCATTCGGACTTTTGATGCCAACACGGGCAACCACGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS CCA 72 bp | TGGTGGAGCCCGAGGCCACGTCGTGGTTGCCCGTGTTaGCATCAAAAGTCCGAATGCGGTACTGACCATTGT | + |
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Preference number: 6 (lower is better) Translates to: WWSPRPRRGCPC*HQKSECGTDHC Trigger: ACAATGGTCAGTACCGCATTCGGACTTTTGATGCCAACACGGGCAACCACGACGTGGCCTCGGGCTCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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| CDS CCA 72 bp | CAGAATCTTGTCAAACTTGATAGGCAGTCGCTCGCGTaGGTAGCTCTTGGTTACCGCCACGGAAAAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: QNLVKLDRQSLA*VALGYRHGKGR Trigger: TCGGCCTTTTCCGTGGCGGTAACCAAGAGCTACCCACGCGAGCGACTGCCTATCAAGTTTGACAAGATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057679.10 ENSMUST00000173002.8 |
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