Pregenerated sensors for C1QTNF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023571Ensembl transcript IDs: ENSMUST00000024338.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCGGGCCCTGGGAGACCTaGGAGGCCTCGCGACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFGPWET*EASRLL Trigger: AAGAAGTCGCGAGGCCTCTCAGGTCTCCCAGGGCCC...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTCGTCATGTGGGCATCTaGGAGCTCAGGTCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNRRHVGI*ELRSRG Trigger: GCCTCTGGACCTGAGCTCTCAGATGCCCACATGACG...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | TCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTCCGTTGCTCTCCAGACCTaGTACAGCCTCCAGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: SSKKQGVGSSIHNRFFSSVALQT*YSLQGR Trigger: ACGTCCCTGGAGGCTGTATCAGGTCTGGAGAGCAAC...GGAGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTAGATGCAGCAGCCCCTaGACCTGCACTGTGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNRRCSSP*TCTVKT Trigger: GGTCTTCACAGTGCAGGTTCAGGGGCTGCTGCATCT...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR GCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAACCGGCCTCTGCCCTaGAGTTCACTGTGGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFNRPLP*SSLWST Trigger: CGTGGACCACAGTGAACTGCAGGGCAGAGGCCGGTT...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTCACTGTGGTCCACGTaGAGGCTGGCAGAAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNRSLWST*RLAENW Trigger: CCAGTTTTCTGCCAGCCTGCACGTGGACCACAGTGA...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTGAAGATGGCAGAGACTaGGGCTGTGAATCGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNREDGRD*GCESAQ Trigger: TTGGGCCGATTCACAGCCCCAGTCTCTGCCATCTTC...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CCA 90 bp | TCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTCCGGTCCACGTGCAGGCTaGCAGAAAACTGGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSKKQGVGSSIHNRFFSSGPRAG*QKTGRW Trigger: CCATCTTCCAGTTTTCTGCCAGCCTGCACGTGGACC...GGAGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCCCTGAACCTGCACTGTaGAGACCCTGCTGTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFPEPAL*RPCCCS Trigger: AGAGCAACAGCAGGGTCTTCACAGTGCAGGTTCAGG...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CCA 90 bp | GCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTAAGCTGGAAGTGTTCTaGATGGTGAGGACTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: APLRSKVLVPQSTIVSSAKLEVF*MVRTAP Trigger: TGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTT...AGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAAGTGTTCTGGATGGTaGGGACTGCCCCAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFKCSGW*GLPQNC Trigger: ACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTT...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTGGAGCTTGGAATCCTTaGAGTTCCACCAGAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNRGAWNP*SSTRVF Trigger: GAAGACTCTGGTGGAACTGCAAGGATTCCAAGCTCC...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTAGGACTCAATACAGATaGGAACACGGACCATATCCC | + |
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Preference number: 4 (lower is better) Translates to: VLFSSSKKQGVGSSIHNRRTQYR*EHGPYP Trigger: GGGATATGGTCCGTGTTCTCATCTGTATTGAGTCCT...ACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCTTCAACCACGTCATGTaGGCATCTGAGAGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFFNHVM*ASESSG Trigger: ACCTGAGCTCTCAGATGCCCACATGACGTGGTTGAA...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR TCA 90 bp | GCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTTCTTTCAGTATCTCCTaGAATTCCTGCAGTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: APLRSKVLVPQSTIVSSASFSIS*NSCSKA Trigger: GGCCTTACTGCAGGAATTTCAGGAGATACTGAAAGA...AGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CCA 90 bp | TTCAGCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGAATCGAAGTTCTGTaGCCTCTTTCAGTATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FSSSKKQGVGSSIHNRFFRIEVL*PLSVSP Trigger: AGGAGATACTGAAAGAGGCCACAGAACTTCGATTCT...GAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | CGGCCCAAGGACAGGCTCAGGCCAGATCCCCGCAGGAAGGCGCCCTaGGTAGTAGGAGCTTGGAATCCTTGCAGTTCCACCAGAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RPKDRLRPDPRRKAP*VVGAWNPCSSTRVF Trigger: GAAGACTCTGGTGGAACTGCAAGGATTCCAAGCTCCTACTACTCAGGGCGCCTTCCTGCGGGGATCTGGCCTGAGCCTGTCCTTGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | ATCATCTGGCCGTCGGACAAAGTTCAACCACGTCATGTGGGCATCTaGGAGCTCAGGTCCAGAGGCTTCCGGGGGCTTGACGGAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: IIWPSDKVQPRHVGI*ELRSRGFRGLDGAW Trigger: CCAGGCTCCGTCAAGCCCCCGGAAGCCTCTGGACCTGAGCTCTCAGATGCCCACATGACGTGGTTGAACTTTGTCCGACGGCCAGATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CCA 90 bp | GAGGACCCATCATCTGGCCGTCGGACAAAGTTCAACCACGTCATGTaGGCATCTGAGAGCTCAGGTCCAGAGGCTTCCGGGGGCTTGACG | + |
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Preference number: 5 (lower is better) Translates to: EDPSSGRRTKFNHVM*ASESSGPEASGGLT Trigger: CGTCAAGCCCCCGGAAGCCTCTGGACCTGAGCTCTCAGATGCCCACATGACGTGGTTGAACTTTGTCCGACGGCCAGATGATGGGTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS GCA 90 bp | ATGAGAACACGGACCATATCCCGGGTACGCAACCGGCCTCTGCCCTaGAGTTCACTGTGGTCCACGTGCAGGCTGGCAGAAAACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MRTRTISRVRNRPLP*SSLWSTCRLAENWK Trigger: CTTCCAGTTTTCTGCCAGCCTGCACGTGGACCACAGTGAACTGCAGGGCAGAGGCCGGTTGCGTACCCGGGATATGGTCCGTGTTCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | CATACTGTCCAGACTGTAGATGCAGCAGCCCCTGAACCTGCACTGTaGAGACCCTGCTGTTGCTCTCCAGACCTGATACAGCCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HTVQTVDAAAPEPAL*RPCCCSPDLIQPPG Trigger: CCCTGGAGGCTGTATCAGGTCTGGAGAGCAACAGCAGGGTCTTCACAGTGCAGGTTCAGGGGCTGCTGCATCTACAGTCTGGACAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CCA 90 bp | GGCCTTTCAAACGGCAGTAGAAGGCCTCAACCACCAGCCGTTGGCTaGGTTCCTGGGGTAACAATGTGTCTGGTAGCCCTGAGAATCGAA | + |
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Preference number: 5 (lower is better) Translates to: GLSNGSRRPQPPAVG*VPGVTMCLVALRIE Trigger: TTCGATTCTCAGGGCTACCAGACACATTGTTACCCCAGGAACCCAGCCAACGGCTGGTGGTTGAGGCCTTCTACTGCCGTTTGAAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | GGTAGCCCTGAGAATCGAAGTTCTGTGGCCTCTTTCAGTATCTCCTaGAATTCCTGCAGTAAGGCCTCTGGGGTAACGCCCACACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSPENRSSVASFSIS*NSCSKASGVTPTPG Trigger: CCCTGGTGTGGGCGTTACCCCAGAGGCCTTACTGCAGGAATTTCAGGAGATACTGAAAGAGGCCACAGAACTTCGATTCTCAGGGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | ACGAACACAGAGACATACTGTCCAGACTGTAGATGCAGCAGCCCCTaGACCTGCACTGTGAAGACCCTGCTGTTGCTCTCCAGACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TNTETYCPDCRCSSP*TCTVKTLLLLSRPD Trigger: ATCAGGTCTGGAGAGCAACAGCAGGGTCTTCACAGTGCAGGTTCAGGGGCTGCTGCATCTACAGTCTGGACAGTATGTCTCTGTGTTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 90 bp | AGGTACCCAAAAGCATTCCCGAGAAGCTGGAAGTGTTCTGGATGGTaGGGACTGCCCCAGAACTGTTGTCCACGAACACAGAGACATACT | + |
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Preference number: 5 (lower is better) Translates to: RYPKAFPRSWKCSGW*GLPQNCCPRTQRHT Trigger: AGTATGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTCGGGAATGCTTTTGGGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS GCA 90 bp | CAAAAGCATTCCCGAGAAGCTGGAAGTGTTCTGGATGGTGAGGACTaGCCCAGAACTGTTGTCCACGAACACAGAGACATACTGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QKHSREAGSVLDGED*PRTVVHEHRDILSR Trigger: TCTGGACAGTATGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTCGGGAATGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CAA 90 bp | GCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTGTGAAGACCCTGCTGTaGCTCTCCAGACCTGATACA | + |
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Preference number: 5 (lower is better) Translates to: APLRSKVLVPQSTIVSSAVKTLL*LSRPDT Trigger: TGTATCAGGTCTGGAGAGCAACAGCAGGGTCTTCAC...AGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS-3UTR CAA 90 bp | GCTCCTCTAAGAAGCAAGGTGTTGGTTCCTCAATCCACAATCGTTTCTTCAGCTACTGCCCCAGAACTGTaGTCCACGAACACAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: APLRSKVLVPQSTIVSSATAPEL*STNTET Trigger: TGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGT...AGCTGAAGAAACGATTGTGGATTGAGGAACCAACACCTTGCTTCTTAGAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 72 bp | GGGGAATCCACACGCGCAAACAGCTGCCGAGACTTCTaGAGCTCCTGCCGGGCCCCGGCTCCTGCAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GESTRANSCRDF*SSCRAPAPAVC Trigger: ACAGACTGCAGGAGCCGGGGCCCGGCAGGAGCTCAAGAAGTCTCGGCAGCTGTTTGCGCGTGTGGATTCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 90 bp | GGAGGTCCTGGGGGCCCTGGGAGACCTGAGAGGCCTCGCGACTTCTaGTCCCGGCCACGACACCGTTTTCTAGAGGACCCATCATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGPGGPGRPERPRDF*SRPRHRFLEDPSSG Trigger: GCCAGATGATGGGTCCTCTAGAAAACGGTGTCGTGGCCGGGACAAGAAGTCGCGAGGCCTCTCAGGTCTCCCAGGGCCCCCAGGACCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 72 bp | GGGAATCCACACGCGCAAACAGCTGCCGAGACTTCTTaGGCTCCTGCCGGGCCCCGGCTCCTGCAGTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GNPHAQTAAETS*APAGPRLLQSV Trigger: TACAGACTGCAGGAGCCGGGGCCCGGCAGGAGCTCAAGAAGTCTCGGCAGCTGTTTGCGCGTGTGGATTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 72 bp | CATCTGAGAGCTCAGGTCCAGAGGCTTCCGGGGGCTTaGCGGAGCCTGGGAATCCCTCACGGTTGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: HLRAQVQRLPGA*RSLGIPHGWTW Trigger: CCACGTCCAACCGTGAGGGATTCCCAGGCTCCGTCAAGCCCCCGGAAGCCTCTGGACCTGAGCTCTCAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS GCA 72 bp | CGGACCATATCCCGGGTACGCAACCGGCCTCTGCCCTaGAGTTCACTGTGGTCCACGTGCAGGCTGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RTISRVRNRPLP*SSLWSTCRLAE Trigger: TTCTGCCAGCCTGCACGTGGACCACAGTGAACTGCAGGGCAGAGGCCGGTTGCGTACCCGGGATATGGTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS GCA 72 bp | GAACACGGACCATATCCCGGGTACGCAACCGGCCTCTaGCCTGCAGTTCACTGTGGTCCACGTGCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: EHGPYPGYATGL*PAVHCGPRAGW Trigger: CCAGCCTGCACGTGGACCACAGTGAACTGCAGGGCAGAGGCCGGTTGCGTACCCGGGATATGGTCCGTGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 72 bp | GCATCTGAGAGCTCAGGTCCAGAGGCTTCCGGGGGCTaGACGGAGCCTGGGAATCCCTCACGGTTGGACGTG | + |
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Preference number: 6 (lower is better) Translates to: ASESSGPEASGG*TEPGNPSRLDV Trigger: CACGTCCAACCGTGAGGGATTCCCAGGCTCCGTCAAGCCCCCGGAAGCCTCTGGACCTGAGCTCTCAGATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 90 bp | GTAATATTGGGGGAATCCACACGCGCAAACAGCTGCCGAGACTTCTaGAGCTCCTGCCGGGCCCCGGCTCCTGCAGTCTGTAGCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VILGESTRANSCRDF*SSCRAPAPAVCSQR Trigger: CCTCTGGCTACAGACTGCAGGAGCCGGGGCCCGGCAGGAGCTCAAGAAGTCTCGGCAGCTGTTTGCGCGTGTGGATTCCCCCAATATTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 90 bp | GTCATGTGGGCATCTGAGAGCTCAGGTCCAGAGGCTTCCGGGGGCTaGACGGAGCCTGGGAATCCCTCACGGTTGGACGTGGTAATATTG | + |
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Preference number: 6 (lower is better) Translates to: VMWASESSGPEASGG*TEPGNPSRLDVVIL Trigger: CAATATTACCACGTCCAACCGTGAGGGATTCCCAGGCTCCGTCAAGCCCCCGGAAGCCTCTGGACCTGAGCTCTCAGATGCCCACATGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 90 bp | GCTCAGGCCAGATCCCCGCAGGAAGGCGCCCTGAGTAGTAGGAGCTaGGAATCCTTGCAGTTCCACCAGAGTCTTCTTGTCCACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AQARSPQEGALSSRS*ESLQFHQSLLVHQH Trigger: GTGCTGGTGGACAAGAAGACTCTGGTGGAACTGCAAGGATTCCAAGCTCCTACTACTCAGGGCGCCTTCCTGCGGGGATCTGGCCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CCA 72 bp | TCATCTGGCCGTCGGACAAAGTTCAACCACGTCATGTaGGCATCTGAGAGCTCAGGTCCAGAGGCTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SSGRRTKFNHVM*ASESSGPEASG Trigger: CCCGGAAGCCTCTGGACCTGAGCTCTCAGATGCCCACATGACGTGGTTGAACTTTGTCCGACGGCCAGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CCA 72 bp | CCGGCCACGACACCGTTTTCTAGAGGACCCATCATCTaGCCGTCGGACAAAGTTCAACCACGTCATGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PATTPFSRGPII*PSDKVQPRHVG Trigger: GCCCACATGACGTGGTTGAACTTTGTCCGACGGCCAGATGATGGGTCCTCTAGAAAACGGTGTCGTGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 72 bp | AGATCCCCGCAGGAAGGCGCCCTGAGTAGTAGGAGCTaGGAATCCTTGCAGTTCCACCAGAGTCTTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RSPQEGALSSRS*ESLQFHQSLLV Trigger: GACAAGAAGACTCTGGTGGAACTGCAAGGATTCCAAGCTCCTACTACTCAGGGCGCCTTCCTGCGGGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CCA 72 bp | GTACCCAAAAGCATTCCCGAGAAGCTGGAAGTGTTCTaGATGGTGAGGACTGCCCCAGAACTGTTGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: VPKSIPEKLEVF*MVRTAPELLST Trigger: CGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTCGGGAATGCTTTTGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS TCA 72 bp | AAAGCATTCCCGAGAAGCTGGAAGTGTTCTGGATGGTaGGGACTGCCCCAGAACTGTTGTCCACGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: KAFPRSWKCSGW*GLPQNCCPRTQ Trigger: CTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTCGGGAATGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS GCA 72 bp | TCCCGAGAAGCTGGAAGTGTTCTGGATGGTGAGGACTaGCCCAGAACTGTTGTCCACGAACACAGAGACATA | + |
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Preference number: 6 (lower is better) Translates to: SREAGSVLDGED*PRTVVHEHRDI Trigger: TATGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 90 bp | GAGAAGCTGGAAGTGTTCTGGATGGTGAGGACTGCCCCAGAACTGTaGTCCACGAACACAGAGACATACTGTCCAGACTGTAGATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EKLEVFWMVRTAPEL*STNTETYCPDCRCS Trigger: GCTGCATCTACAGTCTGGACAGTATGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTCCAGCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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| CDS CAA 72 bp | GAAGTGTTCTGGATGGTGAGGACTGCCCCAGAACTGTaGTCCACGAACACAGAGACATACTGTCCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: EVFWMVRTAPEL*STNTETYCPDC Trigger: ACAGTCTGGACAGTATGTCTCTGTGTTCGTGGACAACAGTTCTGGGGCAGTCCTCACCATCCAGAACACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024338.5 |
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