Pregenerated sensors for C1QTNF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017446Ensembl transcript IDs: ENSMUST00000017590.9, ENSMUST00000106286.3, ENSMUST00000124861.2, ENSMUST00000133558.3
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGAGTCCCTGAGGTTCCCAGCTGCTGTCAGGATCCTGTGAGTTaGGGCAAGCAGGATGCTGCCACCAGCCCAGAGCCAACCACAGGG | + |
|
Preference number: 1 (lower is better) Translates to: AGVPEVPSCCQDPVS*GKQDAATSPEPTTG Trigger: CCCTGTGGTTGGCTCTGGGCTGGTGGCAGCATCCTGCTTGCCCCAACTCACAGGATCCTGACAGCAGCTGGGAACCTCAGGGACTCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 90 bp | AAGCTGCAGGAGTCCCTGAGGTTCCCAGCTGCTGTCAGGATCCTGTaGGTTGGGGCAAGCAGGATGCTGCCACCAGCCCAGAGCCAACCA | + |
|
Preference number: 1 (lower is better) Translates to: KLQESLRFPAAVRIL*VGASRMLPPAQSQP Trigger: TGGTTGGCTCTGGGCTGGTGGCAGCATCCTGCTTGCCCCAACTCACAGGATCCTGACAGCAGCTGGGAACCTCAGGGACTCCTGCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 90 bp | GATGTCCCAACAGGCAAGAGAGCCCTCCCACCCTGGGGTCCAGAGTaGCTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTA | + |
|
Preference number: 1 (lower is better) Translates to: DVPTGKRALPPWGPE*LGKWSRAERYWDIV Trigger: TACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAGTCACTCTGGACCCCAGGGTGGGAGGGCTCTCTTGCCTGTTGGGACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR GCA 90 bp | CGGGGCAGGACTCCAGTGTCTGTAGAATGCAGGGATAGGTCAGGGTaGCAGGCAAGGAGGTCAGCAGTCCACAAAAGCTCCACAGGAGTG | + |
|
Preference number: 1 (lower is better) Translates to: RGRTPVSVECRDRSG*QARRSAVHKSSTGV Trigger: CACTCCTGTGGAGCTTTTGTGGACTGCTGACCTCCTTGCCTGGCACCCTGACCTATCCCTGCATTCTACAGACACTGGAGTCCTGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 90 bp | GCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCCAGGCCCTaGGGATCAACACGGGGTGAGATGGGGAAAGAACACAGGCTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ARPSWHKADIQWPRP*GSTRGEMGKEHRLS Trigger: AGAGAGCCTGTGTTCTTTCCCCATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 90 bp | CCAGCTCTGGGTCTCAAAGGAAGTCCCTCTCACGTGTCCATAAGCTaGCTAGGGCTGTGTCAGGGCTGGGCAGGTCTATCAGACTCATCC | + |
|
Preference number: 1 (lower is better) Translates to: PALGLKGSPSHVSIS*LGLCQGWAGLSDSS Trigger: GGATGAGTCTGATAGACCTGCCCAGCCCTGACACAGCCCTAGTCAGCTTATGGACACGTGAGAGGGACTTCCTTTGAGACCCAGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 90 bp | TGGAAGTGGCTTGGAGAGTCTGACCAGCAGAAGCCCCTTCGGAGGTaGCATATACGTACATTGAGCTCCAGAAGGAAAAGAGAGGGATCC | + |
|
Preference number: 1 (lower is better) Translates to: WKWLGESDQQKPLRR*HIRTLSSRRKREGS Trigger: GGATCCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGACTCTCCAAGCCACTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 90 bp | ACCTTTCTTTCTCTTTTCTGCTTGACTTCGTTCCTAAGAAACCCATaGTATTTGCTTACTTGTGTCCAGGAATGGGAACACACAGGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: TFLSLFCLTSFLRNP*YLLTCVQEWEHTGA Trigger: AGCCCCTGTGTGTTCCCATTCCTGGACACAAGTAAGCAAATATCATGGGTTTCTTAGGAACGAAGTCAAGCAGAAAAGAGAAAGAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACAGCTGCAGGAGTCCCTaGGGTTCCCAGCTGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AELGRKQGTRDGEGQFGNSCRSP*GSQLLS Trigger: TGACAGCAGCTGGGAACCTCAGGGACTCCTGCAGCT...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCCCTGGGGTCCAGAGTaGCTGGGGAAGTGGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PPGSSKQGLVGTKQISSGPWGPE*LGKWSR Trigger: TCTGCTCCACTTCCCCAGTCACTCTGGACCCCAGGG...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGGATCCTAACCAAGGGCCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACCACAGGGGGCACTTaGTGTTCTCCCCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ERDPNQGPPGSSKQGLVGTTGGT*CSPPTL Trigger: AAGGGTTGGGGGAGAACAGCAAGTGCCCCCTGTGGT...GCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGGCCCTTGGTTAGGATCCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGTTGGGGCAAGCAGGATaGTGCCACCAGCCCAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RMLNWEGSRALGMVKGSLLGQAG*CHQPRA Trigger: GGCTCTGGGCTGGTGGCAGCATCCTGCTTGCCCCAA...CAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CACAAAGCAGATATCCAGTGGCCCAGGCCCTGGGGATCAACACGGGGTGAGATGGATCGCACCGTCCTTTaGGATTCCCAGTGGCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HKADIQWPRPWGSTRGEMDRTVL*DSQWPR Trigger: CCTTGGCCACTGGGAATCCCAAAGGACGGTGCGATC...CATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGACCACAGGGGGCACTTaGTGTTCTCCCCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RQDAELGRKQGTRDGEGQTTGGT*CSPPTL Trigger: AAGGGTTGGGGGAGAACAGCAAGTGCCCCCTGTGGT...CTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCGGAGCAGAGAGAAAATaGGGTCAGCCCGGGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PPGSSKQGLVGTKQISSGGAERK*GQPGAG Trigger: TCCTGCCCCGGGCTGACCCCATTTTCTCTCTGCTCC...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGGGAGCAGAGAGAAAATaGGGTCAGCCCGGGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TQALCNQRIRPEAFPESEGAERK*GQPGAG Trigger: TCCTGCCCCGGGCTGACCCCATTTTCTCTCTGCTCC...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGAACACACAGGGGCTGTaGTCTGGAACACCCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TQALCNQRIRPEAFPESENTQGL*SGTPCG Trigger: GCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTT...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACCCTGAGGTTCCCAGCTaGTGTCAGGATCCTGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AELGRKQGTRDGEGQFGNPEVPS*CQDPVS Trigger: ACTCACAGGATCCTGACAGCAGCTGGGAACCTCAGG...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGCAGGATCCTGTGAGTTaGGGCAAGCAGGATGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TQALCNQRIRPEAFPESEQDPVS*GKQDAA Trigger: GGCAGCATCCTGCTTGCCCCAACTCACAGGATCCTG...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGGGATCCTAACCAAGGGCCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCCAACACGGGGTGAGATaGGGAAAGAACACAGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ERDPNQGPPGSSKQGLVGQHGVR*GKNTGS Trigger: AGAGCCTGTGTTCTTTCCCCATCTCACCCCGTGTTG...GCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGGCCCTTGGTTAGGATCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGAGGAGGAAGGGGAACTaGTGTCCCAACAGGCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RMLNWEGSRALGMVKGSLRRKGN*CPNRQE Trigger: CTCTTGCCTGTTGGGACATCAGTTCCCCTTCCTCCT...CAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACCAGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGATCCCAGACAGGATGCTaGACTGGGAAGGAAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SDQQKPLRRWHIRTLSSRSQTGC*TGKEAG Trigger: CCCTGCTTCCTTCCCAGTTCAGCATCCTGTCTGGGA...TCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTATTTTTGGGGCAAGCAGGATaGTGCCACCAGCCCAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGKWSRAERYWDIVGALFLGQAG*CHQPRA Trigger: GGCTCTGGGCTGGTGGCAGCATCCTGCTTGCCCCAA...AAATAAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACCAGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGACAGGATCCTGTGAGTTaGGGCAAGCAGGATGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SDQQKPLRRWHIRTLSSRQDPVS*GKQDAA Trigger: GGCAGCATCCTGCTTGCCCCAACTCACAGGATCCTG...TCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTATTTAGCTGCAGGAGTCCCTaGGGTTCCCAGCTGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGKWSRAERYWDIVGALFSCRSP*GSQLLS Trigger: TGACAGCAGCTGGGAACCTCAGGGACTCCTGCAGCT...AAATAAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACCAGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGAGGGATCAACACGGGGTaGGATGGGGAAAGAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: SDQQKPLRRWHIRTLSSRGINTG*DGERTQ Trigger: CTGTGTTCTTTCCCCATCTCACCCCGTGTTGATCCC...TCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGACTTGTGTCCAGGAATaGGAACACACAGGGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RMLNWEGSRALGMVKGSLTCVQE*EHTGAV Trigger: CACAGCCCCTGTGTGTTCCCATTCCTGGACACAAGT...CAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCACTTGTGTCCAGGAATaGGAACACACAGGGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PPGSSKQGLVGTKQISSGTCVQE*EHTGAV Trigger: CACAGCCCCTGTGTGTTCCCATTCCTGGACACAAGT...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCCAGGCAGAACACAGGCTCTCTaGAATCAGAGAATCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GSSKQGLVGTKQISSGPGRTQAL*NQRIRP Trigger: AGGCCTGATTCTCTGATTGCAGAGAGCCTGTGTTCT...GCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACGCCCTGGTCCTTCCATaGTTAATTCACCAAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AELGRKQGTRDGEGQFGNALVLP*LIHQEG Trigger: TCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGC...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACTCCAAACCCACAAACTaGAGCTACTCTGTTGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: AELGRKQGTRDGEGQFGNSKPTN*SYSVAI Trigger: AATGGCAACAGAGTAGCTGCAGTTTGTGGGTTTGGA...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCGCCCTGGTCCTTCCATaGTTAATTCACCAAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PPGSSKQGLVGTKQISSGALVLP*LIHQEG Trigger: TCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGC...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGGATCCTAACCAAGGGCCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCCTGCAGCTACTCTGTTaGCATTCATGTTTTTCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: ERDPNQGPPGSSKQGLVGLQLLC*HSCFSY Trigger: ATAGGAAAAACATGAATGGCAACAGAGTAGCTGCAG...GCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGGCCCTTGGTTAGGATCCCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCTCCAAACCCACAAACTaGAGCTACTCTGTTGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: PPGSSKQGLVGTKQISSGSKPTN*SYSVAI Trigger: AATGGCAACAGAGTAGCTGCAGTTTGTGGGTTTGGA...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGACTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTCAAAAGCCAAAACTTTaGAAGCCAAGGCCAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTGEVEQSREVLGHSRSFQKPKL*KPRPRK Trigger: CTTCCTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTG...AAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGAAGGAAAAGAGAGGGCAAAAGCCAAAACTTTaGAAGCCAAGGCCAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: APSEVAYTYIELQKEKRGQKPKL*KPRPRK Trigger: CTTCCTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTG...CCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGCTGCAGCTACTCTGTTaGCATTCATGTTTTTCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TQALCNQRIRPEAFPESELQLLC*HSCFSY Trigger: ATAGGAAAAACATGAATGGCAACAGAGTAGCTGCAG...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CGAGCCCTGGTCCTTCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTGATAGAGCAGAGAGGTACTaGGACATAGTAGGAGCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RALVLPWLIHQEGGRGTDRAERY*DIVGAL Trigger: TAAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCT...ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGTTCATGTTTTTCCTATaGCTCAGTTTCCCCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: RMLNWEGSRALGMVKGSLFMFFL*LSFPNT Trigger: TGTATTGGGGAAACTGAGGCATAGGAAAAACATGAA...CAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CGAGCCCTGGTCCTTCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTGATACCCTTTTACTAGTGTaGCTCAGAAAGATTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: RALVLPWLIHQEGGRGTDTLLLV*LRKIDQ Trigger: CTGGTCAATCTTTCTGAGCCACACTAGTAAAAGGGT...ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTTTCATGTTTTTCCTATaGCTCAGTTTCCCCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: VTGEVEQSREVLGHSRSFFMFFL*LSFPNT Trigger: TGTATTGGGGAAACTGAGGCATAGGAAAAACATGAA...AAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTATTTACCCTTTTACTAGTGTaGCTCAGAAAGATTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGKWSRAERYWDIVGALFTLLLV*LRKIDQ Trigger: CTGGTCAATCTTTCTGAGCCACACTAGTAAAAGGGT...AAATAAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGGCAAGAGAGCCCTCCCACCCTGGGGTCCAGAGTGACTGGGGAAGTGGAGGATCGCACCGTCCTTaGGGATTCCCAGTGGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QQAREPSHPGVQSDWGSGGSHRP*GFPVAK Trigger: CTTGGCCACTGGGAATCCCAAAGGACGGTGCGATCC...TCCACTTCCCCAGTCACTCTGGACCCCAGGGTGGGAGGGCTCTCTTGCCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | GAGTCCCTGAGGTTCCCAGCTGCTGTCAGGATCCTGTaGGTTGGGGCAAGCAGGATGCTGCCACCAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ESLRFPAAVRIL*VGASRMLPPAQ Trigger: CTGGGCTGGTGGCAGCATCCTGCTTGCCCCAACTCACAGGATCCTGACAGCAGCTGGGAACCTCAGGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR GCA 72 bp | GGGTCAGCCCGGGGCAGGACTCCAGTGTCTGTAGAATaGAGGGATAGGTCAGGGTGCCAGGCAAGGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSARGRTPVSVE*RDRSGCQARRS Trigger: TGACCTCCTTGCCTGGCACCCTGACCTATCCCTGCATTCTACAGACACTGGAGTCCTGCCCCGGGCTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | CCAAGGGCCACCAGGAAGCAGCAAGCAAGGCCTAGTTaGCACAAAGCAGATATCCAGTGGCCCAGGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRATRKQQARPS*HKADIQWPRPW Trigger: CCAGGGCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGGCCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | TGTGTCCAGGAATGGGAACACACAGGGGCTGTGCTCTaGAACACCCTGTGGCCACGGGACAACACAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: CVQEWEHTGAVL*NTLWPRDNTAQ Trigger: CTGTGCTGTGTTGTCCCGTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | GCTGTAGGCACACCCATGGAAGTGGCTTGGAGAGTCTaGCCAGCAGAAGCCCCTTCGGAGGTGGCATATACG | + |
|
Preference number: 3 (lower is better) Translates to: AVGTPMEVAWRV*PAEAPSEVAYT Trigger: CGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGACTCTCCAAGCCACTTCCATGGGTGTGCCTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | CAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTaGCCCAGGCCCTGGGGATCAACACGGGGTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QARPSWHKADIQ*PRPWGSTRGEM Trigger: CATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGGCAAGAGAGCCCTCCCACCCTGGGGTCCAGAGTGACTGGGGAAGTGGAGTGGCCAAGGGCATCTaGTCAAAAGCCAAAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QQAREPSHPGVQSDWGSGVAKGI*SKAKTL Trigger: CAAAGTTTTGGCTTTTGACAAGATGCCCTTGGCCAC...TCCACTTCCCCAGTCACTCTGGACCCCAGGGTGGGAGGGCTCTCTTGCCTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGAAGGAAAAGAGAGGGGGATCGCACCGTCCTTaGGGATTCCCAGTGGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: APSEVAYTYIELQKEKRGGSHRP*GFPVAK Trigger: CTTGGCCACTGGGAATCCCAAAGGACGGTGCGATCC...CCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR GCA 72 bp | TTACTTGTGTCCAGGAATGGGAACACACAGGGGCTGTaGTCTGGAACACCCTGTGGCCACGGGACAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLVSRNGNTQGL*SGTPCGHGTTQ Trigger: CTGTGTTGTCCCGTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACACAAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | AGTTGGCACAAAGCAGATATCCAGTGGCCCAGGCCCTaGGGATCAACACGGGGTGAGATGGGGAAAGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SWHKADIQWPRP*GSTRGEMGKEH Trigger: GTGTTCTTTCCCCATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTGCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | GGTCTCAAAGGAAGTCCCTCTCACGTGTCCATAAGCTaGCTAGGGCTGTGTCAGGGCTGGGCAGGTCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLKGSPSHVSIS*LGLCQGWAGLS Trigger: TGATAGACCTGCCCAGCCCTGACACAGCCCTAGTCAGCTTATGGACACGTGAGAGGGACTTCCTTTGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | TCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTaGTGTCCCAACAGGCAAGAGAGCCCTCCCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SMVNSPRRRKGN*CPNRQESPPTL Trigger: CAGGGTGGGAGGGCTCTCTTGCCTGTTGGGACATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACGTGGCCAAGGGCATCTaGTCAAAAGCCAAAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AELGRKQGTRDGEGQFGNVAKGI*SKAKTL Trigger: CAAAGTTTTGGCTTTTGACAAGATGCCCTTGGCCAC...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | CAGTGGCCAAGGGCATCTTGTCAAAAGCCAAAACTTTaGAAGCCAAGGCCAAGGAAGCCAGGATGGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QWPRASCQKPKL*KPRPRKPGWSR Trigger: TCTGCTCCATCCTGGCTTCCTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTGACAAGATGCCCTTGGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | CAGATCTGGGATCGCACCGTCCTTTGGGATTCCCAGTaGCCAAGGGCATCTTGTCAAAAGCCAAAACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QIWDRTVLWDSQ*PRASCQKPKLW Trigger: CCAAAGTTTTGGCTTTTGACAAGATGCCCTTGGCCACTGGGAATCCCAAAGGACGGTGCGATCCCAGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | CTTGGAGAGTCTGACCAGCAGAAGCCCCTTCGGAGGTaGCATATACGTACATTGAGCTCCAGAAGGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGESDQQKPLRR*HIRTLSSRRKR Trigger: TCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGACTCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | AGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTaGGCTCCAGAAGGAAAAGAGAGGGATCCTAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRSPFGGGIYVH*APEGKERDPNQ Trigger: TTGGTTAGGATCCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CCA 72 bp | AGTTTGGGAACCCAAATCCGAGCCCTGGTCCTTCCATaGTTAATTCACCAAGAAGGAGGAAGGGGAACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLGTQIRALVLP*LIHQEGGRGTD Trigger: ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCGGATTTGGGTTCCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | GAGGTCAGTCCTGCTGTCCCCAGGAAAGCTCATATGTaGTCTAGAGTTAAGTCAGATGTGGTTTCCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: EVSPAVPRKAHM*SRVKSDVVSKP Trigger: GGGTTTGGAAACCACATCTGACTTAACTCTAGATCACATATGAGCTTTCCTGGGGACAGCAGGACTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTATGATATTTGCTTACTaGTGTCCAGGAATGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: VTGEVEQSREVLGHSRSFMIFAY*CPGMGT Trigger: TGTTCCCATTCCTGGACACAAGTAAGCAAATATCAT...AAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR TCA 72 bp | TCTCTTTTCTGCTTGACTTCGTTCCTAAGAAACCCATaGTATTTGCTTACTTGTGTCCAGGAATGGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SLFCLTSFLRNP*YLLTCVQEWEH Trigger: GTGTTCCCATTCCTGGACACAAGTAAGCAAATATCATGGGTTTCTTAGGAACGAAGTCAAGCAGAAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR GCA 72 bp | AGAGTTAAGTCAGATGTGGTTTCCAAACCCACAAACTaGAGCTACTCTGTTGCCATTCATGTTTTTCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: RVKSDVVSKPTN*SYSVAIHVFPM Trigger: CATAGGAAAAACATGAATGGCAACAGAGTAGCTGCAGTTTGTGGGTTTGGAAACCACATCTGACTTAACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCCAGGAATGGGAACACACAGGGGCTGTGCTCTGGAACACCCTGTGGCCACGGATGGGGCCCCAGGTaGTGGCCAGCAGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRNGNTQGLCSGTPCGHGWGPR*WPAAGS Trigger: GCTGCCTGCTGCTGGCCATCACCTGGGGCCCCATCC...GTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCCAGGAATGGGAACACACAGGGGCTGTGCTCTGGAACACCCTGTGGCCACGGCAGCATCCCAGCATaGATCCCTGTGCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRNGNTQGLCSGTPCGHGSIPA*IPVHRS Trigger: GCTCCTGTGCACAGGGATTCATGCTGGGATGCTGCC...GTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCCAGGAATGGGAACACACAGGGGCTGTGCTCTGGAACACCCTGTGGCCACGGCTCTGACTCTGCATaGTGCTGCGGTCGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRNGNTQGLCSGTPCGHGSDSA*CCGRSP Trigger: AGGTGAGCGACCGCAGCATCATGCAGAGTCAGAGCC...GTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GTGTCCAGGAATGGGAACACACAGGGGCTGTGCTCTGGAACACCCTGTGGCCACATCCCTTCTGCCCTTTaGGGCCAACATGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRNGNTQGLCSGTPCGHIPSAL*GQHGPW Trigger: CCAGGGGCCATGTTGGCCCCAAAGGGCAGAAGGGAT...GTGGCCACAGGGTGTTCCAGAGCACAGCCCCTGTGTGTTCCCATTCCTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCACCAGCCCAGAGCCAACCACAGGGGGCACTTGCTGTTCTCCCCCAATCCCAGGGGCTCCAATaGATCCCTTCTGCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLPPAQSQPQGALAVLPQSQGLQ*IPSALW Trigger: CCAAAGGGCAGAAGGGATCCATTGGAGCCCCTGGGA...TTGGGGGAGAACAGCAAGTGCCCCCTGTGGTTGGCTCTGGGCTGGTGGCAGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCCAGGCTTGCCGTACTTCCCCTaGAGGCCTCGATCCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSKQGLVGTKQISSGPGLPYFP*RPRSPR Trigger: CCGAGGGGATCGAGGCCTCCAGGGGAAGTACGGCAA...GCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CAA 72 bp | AGCAGCCTCTGCTGTAGGCACACCCATGGAAGTGGCTaGGAGAGTCTGACCAGCAGAAGCCCCTTCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCCRHTHGSG*ESLTSRSPFGG Trigger: ACCTCCGAAGGGGCTTCTGCTGGTCAGACTCTCCAAGCCACTTCCATGGGTGTGCCTACAGCAGAGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCATCTTGTCAAAAGCCAAAACTTTGGAAGCCAAGGCCAAGGAAGCCAGGAGGATGGGGCCCCAGGTaGTGGCCAGCAGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RASCQKPKLWKPRPRKPGGWGPR*WPAAGS Trigger: GCTGCCTGCTGCTGGCCATCACCTGGGGCCCCATCC...TCCTGGCTTCCTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTGACAAGATGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | AGACAGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTCTCACGCTCGCCCTTaGAGAGACGCACCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQDAELGRKQGTRDGEGQSHARP*RDAPRP Trigger: AGGTCTGGGTGCGTCTCTTCAAGGGCGAGCGTGAGA...CTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | CAACAGGCAAGAGAGCCCTCCCACCCTGGGGTCCAGAGTGACTGGGGAAGTGGAAGGATCCAGAGGAGATaGCAGCTCCTCTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQAREPSHPGVQSDWGSGRIQRR*QLLCLF Trigger: GAAGAGACAGAGGAGCTGCCATCTCCTCTGGATCCT...TCCACTTCCCCAGTCACTCTGGACCCCAGGGTGGGAGGGCTCTCTTGCCTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCAGATATCCAGTGGCCCAGGCCCTGGGGATCAACACGGGGTGAGATGCCTTTGGGGCCAACATaGCCCCTGGGACCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKADIQWPRPWGSTRGEMPLGPT*PLGPVE Trigger: TTCTACAGGTCCCAGGGGCCATGTTGGCCCCAAAGG...CATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACATCCCTTCTGCCCTTTaGGGCCAACATGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELGRKQGTRDGEGQFGNIPSAL*GQHGPW Trigger: CCAGGGGCCATGTTGGCCCCAAAGGGCAGAAGGGAT...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGGGCAGCATCCCAGCATaGATCCCTGTGCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQALCNQRIRPEAFPESEGSIPA*IPVHRS Trigger: GCTCCTGTGCACAGGGATTCATGCTGGGATGCTGCC...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR TCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCTCTCACGCTCGCCCTTaGAGAGACGCACCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSKQGLVGTKQISSGSHARP*RDAPRP Trigger: AGGTCTGGGTGCGTCTCTTCAAGGGCGAGCGTGAGA...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCAGATATCCAGTGGCCCAGGCCCTGGGGATCAACACGGGGTGAGATGTTCCTCCTGAACTCGTaGCACAAGGCTCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HKADIQWPRPWGSTRGEMFLLNS*HKAQDG Trigger: CCCATCCTGAGCCTTGTGCCACGAGTTCAGGAGGAA...CATCTCACCCCGTGTTGATCCCCAGGGCCTGGGCCACTGGATATCTGCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACCTAGGGCTCAGAGGCTaGCTTGACCAGGTAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AELGRKQGTRDGEGQFGNLGLRG*LDQVAT Trigger: AGTGGCTACCTGGTCAAGCCAGCCTCTGAGCCCTAG...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CAA 72 bp | GAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTaGGGAACCCAAATCCGAGCCCTGGTCCTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSRALGMVKGS*GTQIRALVLPW Trigger: CCATGGAAGGACCAGGGCTCGGATTTGGGTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | CGAGCCCTGGTCCTTCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTGATTTGCCGTACTTCCCCTaGAGGCCTCGATCCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RALVLPWLIHQEGGRGTDLPYFP*RPRSPR Trigger: CCGAGGGGATCGAGGCCTCCAGGGGAAGTACGGCAA...ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCTCTCTGCAATCAGAGAATCAGGCCTGAGGCCTTCCCTGAGTCTGAGTTCCTCCTGAACTCGTaGCACAAGGCTCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQALCNQRIRPEAFPESEFLLNS*HKAQDG Trigger: CCCATCCTGAGCCTTGTGCCACGAGTTCAGGAGGAA...CTCAGACTCAGGGAAGGCCTCAGGCCTGATTCTCTGATTGCAGAGAGCCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACCAGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGACCTTTGGGGCCAACATaGCCCCTGGGACCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQQKPLRRWHIRTLSSRPLGPT*PLGPVE Trigger: TTCTACAGGTCCCAGGGGCCATGTTGGCCCCAAAGG...TCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGAAGGAAAAGAGAGGGTACTGGCTCTTGCAGTaGTTCCCAGGGGCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: APSEVAYTYIELQKEKRGYWLLQ*FPGAPM Trigger: CATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTA...CCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGGGAACATGGTGATGTTGATCTaGGGTGGAGGAATTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELGRKQGTRDGEGQFGNMVMLI*GGGIVW Trigger: CCAGACAATTCCTCCACCCCAGATCAACATCACCAT...GTTCCCAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCATCTTGTCAAAAGCCAAAACTTTGGAAGCCAAGGCCAAGGAAGCCAGGACTAGGGCTCAGAGGCTaGCTTGACCAGGTAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RASCQKPKLWKPRPRKPGLGLRG*LDQVAT Trigger: AGTGGCTACCTGGTCAAGCCAGCCTCTGAGCCCTAG...TCCTGGCTTCCTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTGACAAGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| 3UTR CAA 72 bp | CACCGTCCTTTGGGATTCCCAGTGGCCAAGGGCATCTaGTCAAAAGCCAAAACTTTGGAAGCCAAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRPLGFPVAKGI*SKAKTLEAKAK Trigger: CTTGGCCTTGGCTTCCAAAGTTTTGGCTTTTGACAAGATGCCCTTGGCCACTGGGAATCCCAAAGGACGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCTCGTTCTTCATGATGTaGAGGTACGTCTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGSSKQGLVGTKQISSGSFFMM*RYVSFW Trigger: CCAGAAGGAGACGTACCTGCACATCATGAAGAACGA...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR GCA 90 bp | AGGATGCTGAACTGGGAAGGAAGCAGGGCACTAGGGATGGTGAAGGGCAGTTTGTCGTTCTTCATGATGTaGAGGTACGTCTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMLNWEGSRALGMVKGSLSFFMM*RYVSFW Trigger: CCAGAAGGAGACGTACCTGCACATCATGAAGAACGA...CAAACTGCCCTTCACCATCCCTAGTGCCCTGCTTCCTTCCCAGTTCAGCATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTATTTAGGATCCAGAGGAGATaGCAGCTCCTCTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKWSRAERYWDIVGALFRIQRR*QLLCLF Trigger: GAAGAGACAGAGGAGCTGCCATCTCCTCTGGATCCT...AAATAAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 90 bp | GCCTTCTTCCGGCCCACGGAGAAGGCTGCGTACTGGCTCTTGCAGTaGTTCCCAGGGGCTCCAATGGATCCCTTCTGCCCTTTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AFFRPTEKAAYWLLQ*FPGAPMDPFCPLGP Trigger: TGGCCCCAAAGGGCAGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS GCA 90 bp | GCAAAGCCTTCTTCCGGCCCACGGAGAAGGCTGCGTACTGGCTCTTaGAGTGGTTCCCAGGGGCTCCAATGGATCCCTTCTGCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKPSSGPRRRLRTGS*SGSQGLQWIPSALW Trigger: CCAAAGGGCAGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAAGGCTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS GCA 90 bp | GTAGTCGTTGCTGTGCAAAGCCTTCTTCCGGCCCACGGAGAAGGCTaGGTACTGGCTCTTGCAGTGGTTCCCAGGGGCTCCAATGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VVVAVQSLLPAHGEG*VLALAVVPRGSNGS Trigger: GGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAAGGCTTTGCACAGCAACGACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCCAGGCGCTGCGTACTGGCTCTaGCAGTGGTTCCCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSKQGLVGTKQISSGPGAAYWL*QWFPGA Trigger: AGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGC...GCCTGGGCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 90 bp | GGTATACAGGTGTGCTGGGGTCACAGCATCGGTAGCACCGAGAAGTaGGGAGGTCCTCACCCTGGCGAGGGCTATACTTCTCTCGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIQVCWGHSIGSTEK*GGPHPGEGYTSLVF Trigger: AAACACGAGAGAAGTATAGCCCTCGCCAGGGTGAGGACCTCCCCACTTCTCGGTGCTACCGATGCTGTGACCCCAGCACACCTGTATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGATCCTAACCAAGGGCCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCTCTGGGGTGGAGGAATaGTCTGGTATACAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERDPNQGPPGSSKQGLVGSGVEE*SGIQVC Trigger: GCACACCTGTATACCAGACAATTCCTCCACCCCAGA...GCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGGCCCTTGGTTAGGATCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | CGAGCCCTGGTCCTTCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTGATGCTGCGTACTGGCTCTaGCAGTGGTTCCCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RALVLPWLIHQEGGRGTDAAYWL*QWFPGA Trigger: AGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGC...ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTGGGGAAGTGGAGCAGAGCAGAGAGGTACTGGGACATAGTAGGAGCTTTTTCTCACGCTCGCCCTaGAAGAGACGCACCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VTGEVEQSREVLGHSRSFFSRSP*KRRTQT Trigger: GGTCTGGGTGCGTCTCTTCAAGGGCGAGCGTGAGAA...AAAGCTCCTACTATGTCCCAGTACCTCTCTGCTCTGCTCCACTTCCCCAGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | TCTGACCAGCAGAAGCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGATTCTCACGCTCGCCCTaGAAGAGACGCACCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SDQQKPLRRWHIRTLSSRFSRSP*KRRTQT Trigger: GGTCTGGGTGCGTCTCTTCAAGGGCGAGCGTGAGAA...TCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGCTTCTGCTGGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | CCACCAGGAAGCAGCAAGCAAGGCCTAGTTGGCACAAAGCAGATATCCAGTGGCCTCTTCCCACTCCTGTaGTTCCTCCTGAACTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGSSKQGLVGTKQISSGLFPLL*FLLNSW Trigger: CCACGAGTTCAGGAGGAACAACAGGAGTGGGAAGAG...GCCACTGGATATCTGCTTTGTGCCAACTAGGCCTTGCTTGCTGCTTCCTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | GCCCCTTCGGAGGTGGCATATACGTACATTGAGCTCCAGAAGGAAAAGAGAGGGCTCTTCCCACTCCTGTaGTTCCTCCTGAACTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: APSEVAYTYIELQKEKRGLFPLL*FLLNSW Trigger: CCACGAGTTCAGGAGGAACAACAGGAGTGGGAAGAG...CCCTCTCTTTTCCTTCTGGAGCTCAATGTACGTATATGCCACCTCCGAAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 90 bp | TCGGTCACCTTTCTCGCCTTTCAGGATGGTGATGTTGATCTGGGGTaGAGGAATTGTCTGGTATACAGGTGTGCTGGGGTCACAGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SVTFLAFQDGDVDLG*RNCLVYRCAGVTAS Trigger: CGATGCTGTGACCCCAGCACACCTGTATACCAGACAATTCCTCCACCCCAGATCAACATCACCATCCTGAAAGGCGAGAAAGGTGACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTGCTGTCCCCAGGAAAGCTCATATGTGATCTAGAGTTAAGTCAGATGGATCCCTTCTGCCCTTaGGGGCCAACATGGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLSPGKLICDLELSQMDPFCP*GPTWPL Trigger: CAGGGGCCATGTTGGCCCCAAAGGGCAGAAGGGATC...CATCTGACTTAACTCTAGATCACATATGAGCTTTCCTGGGGACAGCAGGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS-3UTR CAA 90 bp | CGAGCCCTGGTCCTTCCATGGTTAATTCACCAAGAAGGAGGAAGGGGAACTGATTCTGGGGTGGAGGAATaGTCTGGTATACAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RALVLPWLIHQEGGRGTDSGVEE*SGIQVC Trigger: GCACACCTGTATACCAGACAATTCCTCCACCCCAGA...ATCAGTTCCCCTTCCTCCTTCTTGGTGAATTAACCATGGAAGGACCAGGGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | CGGCCCACGGAGAAGGCTGCGTACTGGCTCTTGCAGTaGTTCCCAGGGGCTCCAATGGATCCCTTCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPTEKAAYWLLQ*FPGAPMDPFCP Trigger: AGGGCAGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | CGTACTGGCTCTTGCAGTGGTTCCCAGGGGCTCCAATaGATCCCTTCTGCCCTTTGGGGCCAACATGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTGSCSGSQGLQ*IPSALWGQHGP Trigger: GGGGCCATGTTGGCCCCAAAGGGCAGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS GCA 72 bp | TCTTCCGGCCCACGGAGAAGGCTGCGTACTGGCTCTTaGAGTGGTTCCCAGGGGCTCCAATGGATCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGPRRRLRTGS*SGSQGLQWIPS Trigger: AGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | GTGTGCTGGGGTCACAGCATCGGTAGCACCGAGAAGTaGGGAGGTCCTCACCCTGGCGAGGGCTATACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCWGHSIGSTEK*GGPHPGEGYTS Trigger: AGAAGTATAGCCCTCGCCAGGGTGAGGACCTCCCCACTTCTCGGTGCTACCGATGCTGTGACCCCAGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CAA 72 bp | TTCTTCCGGCCCACGGAGAAGGCTGCGTACTGGCTCTaGCAGTGGTTCCCAGGGGCTCCAATGGATCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFRPTEKAAYWL*QWFPGAPMDPF Trigger: GAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CAA 90 bp | TGCAAAGCCTTCTTCCGGCCCACGGAGAAGGCTGCGTACTGGCTCTaGCAGTGGTTCCCAGGGGCTCCAATGGATCCCTTCTGCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CKAFFRPTEKAAYWL*QWFPGAPMDPFCPL Trigger: CAAAGGGCAGAAGGGATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAAGGCTTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | TGTCTCTTCCCACTCCTGTTGTTCCTCCTGAACTCGTaGCACAAGGCTCAGGATGGGGCCCCAGGTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLFPLLLFLLNS*HKAQDGAPGDG Trigger: GCCATCACCTGGGGCCCCATCCTGAGCCTTGTGCCACGAGTTCAGGAGGAACAACAGGAGTGGGAAGAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 ENSMUST00000124861.2 ENSMUST00000133558.3 |
||
| CDS CCA 72 bp | AAAGCCTTCTTCCGGCCCACGGAGAAGGCTGCGTACTaGCTCTTGCAGTGGTTCCCAGGGGCTCCAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KAFFRPTEKAAY*LLQWFPGAPMD Trigger: ATCCATTGGAGCCCCTGGGAACCACTGCAAGAGCCAGTACGCAGCCTTCTCCGTGGGCCGGAAGAAGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | TCTGGGGTGGAGGAATTGTCTGGTATACAGGTGTGCTaGGGTCACAGCATCGGTAGCACCGAGAAGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGVEELSGIQVC*GHSIGSTEKWG Trigger: TCCCCACTTCTCGGTGCTACCGATGCTGTGACCCCAGCACACCTGTATACCAGACAATTCCTCCACCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CCA 72 bp | TTTCTCGCCTTTCAGGATGGTGATGTTGATCTGGGGTaGAGGAATTGTCTGGTATACAGGTGTGCTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLAFQDGDVDLG*RNCLVYRCAGV Trigger: GACCCCAGCACACCTGTATACCAGACAATTCCTCCACCCCAGATCAACATCACCATCCTGAAAGGCGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||
| CDS CAA 72 bp | CCTCGGTCACCTTTCTCGCCTTTCAGGATGGTGATGTaGATCTGGGGTGGAGGAATTGTCTGGTATACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSPFSPFRMVM*IWGGGIVWYTG Trigger: ACCTGTATACCAGACAATTCCTCCACCCCAGATCAACATCACCATCCTGAAAGGCGAGAAAGGTGACCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017590.9 ENSMUST00000106286.3 |
||