Pregenerated sensors for BZW2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020547Ensembl transcript IDs: ENSMUST00000020856.6, ENSMUST00000220763.2, ENSMUST00000220828.2, ENSMUST00000221388.2, ENSMUST00000223382.2, ENSMUST00000223474.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACTGGTGCCCAGCGACTaGTGGACTCGGAGAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PWCKQKPSFPPQTLQHSQLVPSD*WTRRKS Trigger: GGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAG...TTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGGGTGAGGATGGTGGCTaGGAGGGTCCCATTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVGEDGG*EGPIAQ Trigger: CTGGGCAATGGGACCCTCCCAGCCACCATCCTCACC...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAGCTCGGACTGGCCTTaGGAACTGAACACGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQTEAKFPSPNASAFPTESSDWP*ELNTAS Trigger: GCTGGCCGTGTTCAGTTCCCAAGGCCAGTCCGAGCT...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTACTGGCCTTGGGAACTaGACACGGCCAGCAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KQKPSFPPQTLQHSQPKSTGLGN*TRPAAE Trigger: CTCCGCTGCTGGCCGTGTTCAGTTCCCAAGGCCAGT...ACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGTGGCGAAAGCACCACCTCCTTaGTGGGGCATTCCTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: KPSFPPQTLQHSQPKSVAKAPPP*WGIPET Trigger: TGTCTCAGGAATGCCCCATCAAGGAGGTGGTGCTTT...CGCCACACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | CCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACGGGTTTTGAACCGCTaGCCTGTTAGTACTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PWCKQKPSFPPQTLQHSQRVLNR*PVSTGF Trigger: GAAGCCAGTACTAACAGGCCAGCGGTTCAAAACCCG...TTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTCGCCTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCCTTTTCCGGGTTTTaGACCGCTGGCCTGTTAGTA | + |
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Preference number: 4 (lower is better) Translates to: RPRLSFISLVQTEAKFPSPFSGF*TAGLLV Trigger: TACTAACAGGCCAGCGGTTCAAAACCCGGAAAAGGG...GGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAGGCGAGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGAAGCTTGACAGCGAATaGGGCTGCGATGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVKLDSE*GCDAFF Trigger: AAAGAAGGCATCGCAGCCTCATTCGCTGTCAAGCTT...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | TGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAATCTGGAAGGCCTTCATaGAGTGGATGTTGTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKQKPSFPPQTLQHSQPKSGRPS*SGCCRS Trigger: GCTACGACAACATCCACTTCATGAAGGCCTTCCAGA...TTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGGATCCCAGACAGCATTaGCAACTTTGTCTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVDPRQH*QLCLLC Trigger: GCAGAGCAGACAAAGTTGGCAATGCTGTCTGGGATC...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | CTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTGCAGTTCTTTCCTGGTaGCCAGCGACTGCTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSFISLVQTEAKFPSPNAAVLSW*PATAGL Trigger: GAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGC...AGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | CCCAAGTGTAGTAGCCGACGCCTCAGGGCTCCATTGAAACAAAACAGAAATGAAGCGTATTGCTTTAGGTaGTTCAGTGCCTGCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKCSSRRLRAPLKQNRNEAYCFR*FSACSA Trigger: TGCGGAGCAGGCACTGAAGCACCTAAAGCAATACGC...TTCATTTCTGTTTTGTTTCAATGGAGCCCTGAGGCGTCGGCTACTACACTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGTGGCGGCTTCATTAAGCCCCTaGACAAGTGTATCCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KPSFPPQTLQHSQPKSVAASLSP*TSVSLK Trigger: TTTCAGGGATACACTTGTCCAGGGGCTTAATGAAGC...CGCCACACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAACTCTGTCTGTTCACTaGGAAGAGTTCAAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VQTEAKFPSPNASAFPTETLSVH*EEFKQP Trigger: AGGCTGCTTGAACTCTTCCCAGTGAACAGACAGAGT...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | TGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGACGCTCTTGCCTTTaGCGGCGTGTGCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CKQKPSFPPQTLQHSQPKRRSCL*RRVLLY Trigger: ATAAAGAAGCACACGCCGCCAAAGGCAAGAGCGTCT...TTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGTGGCGATTGGCATCTTTCTCTaGCATCCAGGCTTTGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KPSFPPQTLQHSQPKSVAIGIFL*HPGFEK Trigger: CTTTTCAAAGCCTGGATGGCAGAGAAAGATGCCAAT...CGCCACACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | CCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAAAGTGGTTGGTCATCTTaGTCTTGTCACCATCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: PWCKQKPSFPPQTLQHSQSGWSS*SCHHRL Trigger: TAGACGATGGTGACAAGACCAAGATGACCAACCACT...TTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | GGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GANRSQVSLPKRFSIPNRKTHSG*SSWSCH Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...TCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTACTTAGCGAAATaGTCCACACTCTGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQTEAKFPSPNASAFPTEKYLAK*STLCLF Trigger: GAACAGACAGAGTGTGGATCATTTCGCTAAGTACTT...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | TCACATACACGAGCAGAAGAAACACAACTATTGAAGTGGCCCTGTAACATAGACATTCCACCGCATTCATaGTGCAGGTCCACAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHTRAEETQLLKWPCNIDIPPHS*CRSTAA Trigger: GGCTGCTGTGGACCTGCATCATGAATGCGGTGGAAT...GTCTATGTTACAGGGCCACTTCAATAGTTGTGTTTCTTCTGCTCGTGTATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | CTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTGTCACCATCGTCTATaGGTGTTCCTCCAGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LSFISLVQTEAKFPSPNACHHRL*VFLQGQ Trigger: TTGCCCCTGGAGGAACACGCATAGACGATGGTGACA...AGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGGCCTCTTGTCTAAGTTaGCTTTTCTCAGTGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVASCLS*LFSVKR Trigger: CCTCTTCACTGAGAAAAGCCAACTTAGACAAGAGGC...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTCGCCTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCGTTGGCTTTTCTCAGTaGAGAGGTAACAGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPRLSFISLVQTEAKFPSVGFSQ*RGNRIG Trigger: GCCAATTCTGTTACCTCTTCACTGAGAAAAGCCAAC...GGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAGGCGAGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | TCACATACACGAGCAGAAGAAACACAACTATTGAAGTGGCCCTGTAACATAGACCAGGGGCAAGCATACTaGCAGCCACCAGGATATCAA | + |
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Preference number: 4 (lower is better) Translates to: SHTRAEETQLLKWPCNIDQGQAY*QPPGYQ Trigger: TTGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...GTCTATGTTACAGGGCCACTTCAATAGTTGTGTTTCTTCTGCTCGTGTATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTCGCCTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCTTTTCATTTCCTCTTTaGCGTAAAGCACCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RPRLSFISLVQTEAKFPSFSFPL*RKAPPP Trigger: AGGAGGTGGTGCTTTACGTCAAAGAGGAAATGAAAA...GGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAGGCGAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR GCA 90 bp | TGGCCCTGTAACATAGACACCAGTGGGGCGTTCACACAGTACCTGAAAATACAGATTGCCAACTTTGTCTaGTCTGCTTCAGAAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: WPCNIDTSGAFTQYLKIQIANFV*SASENA Trigger: AGCATTTTCTGAAGCAGAGCAGACAAAGTTGGCAAT...CTGTATTTTCAGGTACTGTGTGAACGCCCCACTGGTGTCTATGTTACAGGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | CTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTAGAACCACGATCTTCTaGAAGGCCTTCATGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSFISLVQTEAKFPSPNARTTIF*KAFMKW Trigger: CCACTTCATGAAGGCCTTCCAGAAGATCGTGGTTCT...AGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | CTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTGGACAAGTGTATCCCTaGAAACTGTGGGTTCGAATT | + |
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Preference number: 4 (lower is better) Translates to: LSFISLVQTEAKFPSPNAGQVYP*KLWVRI Trigger: AATTCGAACCCACAGTTTTCAGGGATACACTTGTCC...AGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | CAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: QTEAKFPSPNASAFPTEKFRMVS*SSFAEN Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...CTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR TCA 90 bp | TCACATACACGAGCAGAAGAAACACAACTATTGAAGTGGCCCTGTAACATAGACGCTTTCTTCGCCTTCTaGTTCAGATTCTTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHTRAEETQLLKWPCNIDAFFAF*FRFFFC Trigger: GCAGAAGAAGAATCTGAATCAGAAGGCGAAGAAAGC...GTCTATGTTACAGGGCCACTTCAATAGTTGTGTTTCTTCTGCTCGTGTATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | TCACATACACGAGCAGAAGAAACACAACTATTGAAGTGGCCCTGTAACATAGACGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SHTRAEETQLLKWPCNIDAENTQ*LVILVL Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...GTCTATGTTACAGGGCCACTTCAATAGTTGTGTTTCTTCTGCTCGTGTATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CCA 90 bp | CTATCATTTATTTCCTTGGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTACAAATTTCTTCATCTaGTCAAGAAAGACGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSFISLVQTEAKFPSPNATNFFI*SRKTLL Trigger: CAAGAGCGTCTTTCTTGACCAGATGAAGAAATTTGT...AGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACCAAGGAAATAAATGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 90 bp | CGCTCTTGCAGCTCCTTCTGCAGTTCTTTCCTGGTGCCCAGCGACTaGTGGACTCGGAGAAAGTCCGACAGCTCCTTCAGCCCCGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: RSCSSFCSSFLVPSD*WTRRKSDSSFSPAS Trigger: TGACGCGGGGCTGAAGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCTGCAAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CCA 90 bp | TCTTGCAGCTCCTTCTGCAGTTCTTTCCTGGTGCCCAGCGACTGCTaGACTCGGAGAAAGTCCGACAGCTCCTTCAGCCCCGCGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SCSSFCSSFLVPSDC*TRRKSDSSFSPASV Trigger: CACTGACGCGGGGCTGAAGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCTGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS TCA 90 bp | CCTGAACCTTCTGCAGGAGGACGAGCTCGGACTGGCCTTGGGAACTaGACACGGCCAGCAGCGGAGCGTATTGCTTTAGGTGCTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PEPSAGGRARTGLGN*TRPAAERIALGASV Trigger: CACTGAAGCACCTAAAGCAATACGCTCCGCTGCTGGCCGTGTTCAGTTCCCAAGGCCAGTCCGAGCTCGTCCTCCTGCAGAAGGTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 90 bp | CCTGAGACAGTCGCTCTTGCAGCTCCTTCTGCAGTTCTTTCCTGGTaGCCAGCGACTGCTGGACTCGGAGAAAGTCCGACAGCTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PETVALAAPSAVLSW*PATAGLGESPTAPS Trigger: TGAAGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCTGCAAGAGCGACTGTCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CCA 90 bp | ATTCCTGAGACAGTCGCTCTTGCAGCTCCTTCTGCAGTTCTTTCCTaGTGCCCAGCGACTGCTGGACTCGGAGAAAGTCCGACAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: IPETVALAAPSAVLS*CPATAGLGESPTAP Trigger: AGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCTGCAAGAGCGACTGTCTCAGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGGAGCTCGGACTGGCCTaGGGAACTGAACACGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVELGLA*GTEHGQ Trigger: CTGGCCGTGTTCAGTTCCCAAGGCCAGTCCGAGCTC...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | GGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGACTGAGACAGTCGCTCTaGCAGCTCCTTCTGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GANRSQVSLPKRFSIPNRLRQSL*QLLLQF Trigger: GAACTGCAGAAGGAGCTGCAAGAGCGACTGTCTCAG...TCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS TCA 90 bp | TCCGACAGCTCCTTCAGCCCCGCGTCAGTGAAGTACTTAGCGAAATaGTCCACACTCTGTCTGTTCACTGGGAAGAGTTCAAGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SDSSFSPASVKYLAK*STLCLFTGKSSSSL Trigger: GAGGCTGCTTGAACTCTTCCCAGTGAACAGACAGAGTGTGGATCATTTCGCTAAGTACTTCACTGACGCGGGGCTGAAGGAGCTGTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 |
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| CDS-3UTR CAA 90 bp | TGGCCCTGTAACATAGACACCAGTGGGGCGTTCACACAGTACCTGAAAATACAGTCCCTTTTCCGGGTTTaGAACCGCTGGCCTGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: WPCNIDTSGAFTQYLKIQSLFRV*NRWPVS Trigger: ACTAACAGGCCAGCGGTTCAAAACCCGGAAAAGGGA...CTGTATTTTCAGGTACTGTGTGAACGCCCCACTGGTGTCTATGTTACAGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | GGTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGATTGGTCATCTTGGTCTaGTCACCATCGTCTATGCGT | + |
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Preference number: 5 (lower is better) Translates to: GANRSQVSLPKRFSIPNRLVILV*SPSSMR Trigger: ACGCATAGACGATGGTGACAAGACCAAGATGACCAA...TCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | TGGCCCTGTAACATAGACACCAGTGGGGCGTTCACACAGTACCTGAAAATACAGCAGGCTTTGAAAAGCTaGACAGCGAATGAGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: WPCNIDTSGAFTQYLKIQQALKS*TANEAA Trigger: CGCAGCCTCATTCGCTGTCAAGCTTTTCAAAGCCTG...CTGTATTTTCAGGTACTGTGTGAACGCCCCACTGGTGTCTATGTTACAGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | TGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAACAGTGGTTGGTCATCTaGGTCTTGTCACCATCGTCT | + |
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Preference number: 5 (lower is better) Translates to: CKQKPSFPPQTLQHSQPKQWLVI*VLSPSS Trigger: AGACGATGGTGACAAGACCAAGATGACCAACCACTG...TTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | TGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAGCTGCGATGCCTTCTTaGACTAAGCTGTCTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CKQKPSFPPQTLQHSQPKAAMPS*TKLSVK Trigger: CTTCACAGACAGCTTAGTCAAAGAAGGCATCGCAGC...TTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: VQTEAKFPSPNASAFPTEENTQW*VILVLS Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VQTEAKFPSPNASAFPTESSSSL*SKLAFL Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | CCCAAGTGTAGTAGCCGACGCCTCAGGGCTCCATTGAAACAAAACAGAAATGAATCTGCCATCCAGGCTTaGAAAAGCTTGACAGCGAAT | + |
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Preference number: 5 (lower is better) Translates to: PKCSSRRLRAPLKQNRNESAIQA*KSLTAN Trigger: ATTCGCTGTCAAGCTTTTCAAAGCCTGGATGGCAGA...TTCATTTCTGTTTTGTTTCAATGGAGCCCTGAGGCGTCGGCTACTACACTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | AAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTACAGCATTGCCAACTTaGTCTGCTCTGCTTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KQKPSFPPQTLQHSQPKSTALPT*SALLQK Trigger: TTTCTGAAGCAGAGCAGACAAAGTTGGCAATGCTGT...ACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | CCCAAGTGTAGTAGCCGACGCCTCAGGGCTCCATTGAAACAAAACAGAAATGAAAGCCTCTTGTCTAAGTaGGCTTTTCTCAGTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: PKCSSRRLRAPLKQNRNESLLSK*AFLSEE Trigger: CTCTTCACTGAGAAAAGCCAACTTAGACAAGAGGCT...TTCATTTCTGTTTTGTTTCAATGGAGCCCTGAGGCGTCGGCTACTACACTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | GTGCAAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAGCCTTTTCCAAATACTaGTATCTCCTGATGAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: VQTEAKFPSPNASAFPTEAFSKY*YLLMSL Trigger: TAAACTCATCAGGAGATACAAGTATTTGGAAAAGGC...TTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 90 bp | ATTGCCCAGCAGGATCCCAGACAGCATTGCCAACTTTGTCTGCTCTaGTTCAGAAAATGCTTTAAGGAAGAGGAGAAGCTTTTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: IAQQDPRQHCQLCLL*FRKCFKEEEKLFHF Trigger: GAAATGAAAAAGCTTCTCCTCTTCCTTAAAGCATTTTCTGAAGCAGAGCAGACAAAGTTGGCAATGCTGTCTGGGATCCTGCTGGGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020856.6 ENSMUST00000220828.2 ENSMUST00000221388.2 ENSMUST00000223474.2 |
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| CDS-3UTR CAA 90 bp | AAACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGTAGAATCCAAAAATTaGGCTACAGCTTCAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KQKPSFPPQTLQHSQPKSVESKN*ATASRS Trigger: TGACCTTGAAGCTGTAGCCAAATTTTTGGATTCTAC...ACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS-3UTR CAA 90 bp | AACAGAAGCCAAGTTTCCCTCCCCAAACGCTTCAGCATTCCCAACCGAAAAGTGTTTCATGATCTTCATTaGCTGAAAACACACAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: NRSQVSLPKRFSIPNRKVFHDLH*LKTHSG Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...CACTTTTCGGTTGGGAATGCTGAAGCGTTTGGGGAGGGAAACTTGGCTTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CCA 90 bp | AATTTGGCTACAGCTTCAAGGTCATCACCAGCTTCATTAAGCCCCTaGACAAGTGTATCCCTGAAAACTGTGGGTTCGAATTTCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: NLATASRSSPASLSP*TSVSLKTVGSNFSF Trigger: AAAAGAGAAATTCGAACCCACAGTTTTCAGGGATACACTTGTCCAGGGGCTTAATGAAGCTGGTGATGACCTTGAAGCTGTAGCCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020856.6 ENSMUST00000220763.2 ENSMUST00000220828.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS-3UTR CAA 90 bp | TCACATACACGAGCAGAAGAAACACAACTATTGAAGTGGCCCTGTAACATAGACGAAGAGGTAACAGAATaGGCATCTTTCTCTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: SHTRAEETQLLKWPCNIDEEVTE*ASFSAI Trigger: GATGGCAGAGAAAGATGCCAATTCTGTTACCTCTTC...GTCTATGTTACAGGGCCACTTCAATAGTTGTGTTTCTTCTGCTCGTGTATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CAA 72 bp | CTGAACCTTCTGCAGGAGGACGAGCTCGGACTGGCCTaGGGAACTGAACACGGCCAGCAGCGGAGCGTATTG | + |
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Preference number: 6 (lower is better) Translates to: LNLLQEDELGLA*GTEHGQQRSVL Trigger: CAATACGCTCCGCTGCTGGCCGTGTTCAGTTCCCAAGGCCAGTCCGAGCTCGTCCTCCTGCAGAAGGTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS TCA 72 bp | TCTGCAGGAGGACGAGCTCGGACTGGCCTTGGGAACTaGACACGGCCAGCAGCGGAGCGTATTGCTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: SAGGRARTGLGN*TRPAAERIALG Trigger: ACCTAAAGCAATACGCTCCGCTGCTGGCCGTGTTCAGTTCCCAAGGCCAGTCCGAGCTCGTCCTCCTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 72 bp | CTGAACACGGCCAGCAGCGGAGCGTATTGCTTTAGGTaGTTCAGTGCCTGCTCCGCAACCAGCTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNTASSGAYCFR*FSACSATSSSF Trigger: GAAGGAGGAGCTGGTTGCGGAGCAGGCACTGAAGCACCTAAAGCAATACGCTCCGCTGCTGGCCGTGTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CCA 72 bp | TCCTTCTGCAGTTCTTTCCTGGTGCCCAGCGACTGCTaGACTCGGAGAAAGTCCGACAGCTCCTTCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SFCSSFLVPSDC*TRRKSDSSFSP Trigger: GGGGCTGAAGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 72 bp | AGCTCCTTCTGCAGTTCTTTCCTGGTGCCCAGCGACTaGTGGACTCGGAGAAAGTCCGACAGCTCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSFCSSFLVPSD*WTRRKSDSSFS Trigger: GCTGAAGGAGCTGTCGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CCA 72 bp | ACAGTCGCTCTTGCAGCTCCTTCTGCAGTTCTTTCCTaGTGCCCAGCGACTGCTGGACTCGGAGAAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: TVALAAPSAVLS*CPATAGLGESP Trigger: CGGACTTTCTCCGAGTCCAGCAGTCGCTGGGCACCAGGAAAGAACTGCAGAAGGAGCTGCAAGAGCGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS TCA 72 bp | CCAGCTCCTCCTTCTTGTTCCATTCCACCGCATTCATaGTGCAGGTCCACAGCAGCCCGATCACAGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PAPPSCSIPPHS*CRSTAARSQLF Trigger: AAACAGCTGTGATCGGGCTGCTGTGGACCTGCATCATGAATGCGGTGGAATGGAACAAGAAGGAGGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS GCA 72 bp | AGTGGTTGGTCATCTTGGTCTTGTCACCATCGTCTATaGGTGTTCCTCCAGGGGCAAGCATACTGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGWSSWSCHHRL*VFLQGQAYCQP Trigger: TGGCTGGCAGTATGCTTGCCCCTGGAGGAACACGCATAGACGATGGTGACAAGACCAAGATGACCAACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020856.6 ENSMUST00000220828.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS CAA 72 bp | TTTGCTGAAAACACACAGTGGTTGGTCATCTTGGTCTaGTCACCATCGTCTATGCGTGTTCCTCCAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FAENTQWLVILV*SPSSMRVPPGA Trigger: GGCCCCTGGAGGAACACGCATAGACGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221388.2 |
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| CDS TCA 72 bp | TCCTTCAGCCCCGCGTCAGTGAAGTACTTAGCGAAATaGTCCACACTCTGTCTGTTCACTGGGAAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFSPASVKYLAK*STLCLFTGKSS Trigger: TGAACTCTTCCCAGTGAACAGACAGAGTGTGGATCATTTCGCTAAGTACTTCACTGACGCGGGGCTGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 |
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| CDS CAA 72 bp | TTTGCTGAAAACACACAGTGGTTGGTCATCTTGGTCTaGTCACCATCGTCTATGCGTGTTCCTCCAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: FAENTQWLVILV*SPSSMRVPPGA Trigger: TGCCCCTGGAGGAACACGCATAGACGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020856.6 ENSMUST00000220828.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS CAA 72 bp | TTGGCATCTTTCTCTGCCATCCAGGCTTTGAAAAGCTaGACAGCGAATGAGGCTGCGATGCCTTCTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: LASFSAIQALKS*TANEAAMPSLT Trigger: AGTCAAAGAAGGCATCGCAGCCTCATTCGCTGTCAAGCTTTTCAAAGCCTGGATGGCAGAGAAAGATGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 ENSMUST00000223474.2 |
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| CDS CAA 90 bp | GTAACAGAATTGGCATCTTTCTCTGCCATCCAGGCTTTGAAAAGCTaGACAGCGAATGAGGCTGCGATGCCTTCTTTGACTAAGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VTELASFSAIQALKS*TANEAAMPSLTKLS Trigger: AGACAGCTTAGTCAAAGAAGGCATCGCAGCCTCATTCGCTGTCAAGCTTTTCAAAGCCTGGATGGCAGAGAAAGATGCCAATTCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 ENSMUST00000223474.2 |
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| CDS CAA 90 bp | AGTGAAGAGGTAACAGAATTGGCATCTTTCTCTGCCATCCAGGCTTaGAAAAGCTTGACAGCGAATGAGGCTGCGATGCCTTCTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: SEEVTELASFSAIQA*KSLTANEAAMPSLT Trigger: AGTCAAAGAAGGCATCGCAGCCTCATTCGCTGTCAAGCTTTTCAAAGCCTGGATGGCAGAGAAAGATGCCAATTCTGTTACCTCTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 ENSMUST00000223474.2 |
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| CDS CCA 72 bp | ACAGCTTCAAGGTCATCACCAGCTTCATTAAGCCCCTaGACAAGTGTATCCCTGAAAACTGTGGGTTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: TASRSSPASLSP*TSVSLKTVGSN Trigger: ATTCGAACCCACAGTTTTCAGGGATACACTTGTCCAGGGGCTTAATGAAGCTGGTGATGACCTTGAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020856.6 ENSMUST00000220763.2 ENSMUST00000220828.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS CCA 72 bp | CTTCATTTGCTGAAAACACACAGTGGTTGGTCATCTTaGTCTTGTCACCATCGTCTATGCGTGTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LHLLKTHSGWSS*SCHHRLCVFLQ Trigger: CTGGAGGAACACGCATAGACGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020856.6 ENSMUST00000220828.2 ENSMUST00000221388.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS CCA 72 bp | TCTGCATTTTGTAACCACTCCACAAATTTCTTCATCTaGTCAAGAAAGACGCTCTTGCCTTTGGCGGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: SAFCNHSTNFFI*SRKTLLPLAAC Trigger: ACACGCCGCCAAAGGCAAGAGCGTCTTTCTTGACCAGATGAAGAAATTTGTGGAGTGGTTACAAAATGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020856.6 |
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| CDS CAA 72 bp | TCTTCATTTGCTGAAAACACACAGTGGTTGGTCATCTaGGTCTTGTCACCATCGTCTATGCGTGTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSFAENTQWLVI*VLSPSSMRVPP Trigger: TGGAGGAACACGCATAGACGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020856.6 ENSMUST00000220828.2 ENSMUST00000221388.2 ENSMUST00000223382.2 ENSMUST00000223474.2 |
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| CDS CAA 90 bp | CTCTGTCTGTTCACTGGGAAGAGTTCAAGCAGCCTCTTGTCTAAGTaGGCTTTTCTCAGTGAAGAGGTAACAGAATTGGCATCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LCLFTGKSSSSLLSK*AFLSEEVTELASFS Trigger: AGAGAAAGATGCCAATTCTGTTACCTCTTCACTGAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACTCTTCCCAGTGAACAGACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 |
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| CDS CAA 72 bp | TTCACTGGGAAGAGTTCAAGCAGCCTCTTGTCTAAGTaGGCTTTTCTCAGTGAAGAGGTAACAGAATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FTGKSSSSLLSK*AFLSEEVTELA Trigger: TGCCAATTCTGTTACCTCTTCACTGAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACTCTTCCCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020856.6 ENSMUST00000221388.2 |
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