Pregenerated sensors for BZW1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051223Ensembl transcript IDs: ENSMUST00000050552.15, ENSMUST00000186949.2, ENSMUST00000188630.7
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGGTAGAACGTTTGTGTGAGGAGTTATCAACCTGTTCTACCTaGAAAGATACAAATGAACCTAGAAGTTTCCAGAAAAAGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: PGVERLCEELSTCST*KDTNEPRSFQKKTQ Trigger: CTGAGTCTTTTTCTGGAAACTTCTAGGTTCATTTGTATCTTTCCAGGTAGAACAGGTTGATAACTCCTCACACAAACGTTCTACCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR TCA 90 bp | CCAAAACACTCAACAATCGTATGGTTTAGTGACAAGACATTTCCTTaGTTCAGTCCTTGTGGGAACTCTTATAACAGTCTAGCTGTATCC | + |
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Preference number: 1 (lower is better) Translates to: PKHSTIVWFSDKTFP*FSPCGNSYNSLAVS Trigger: GGATACAGCTAGACTGTTATAAGAGTTCCCACAAGGACTGAATCAAGGAAATGTCTTGTCACTAAACCATACGATTGTTGAGTGTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR TCA 90 bp | TACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTaGACGACGGTTAACATGCAAGGATCTGGTTGTAGAAATGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: YTLFHYTQYIINGAF*TTVNMQGSGCRNGN Trigger: ATTGCCATTTCTACAACCAGATCCTTGCATGTTAACCGTCGTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR GCA 90 bp | ATGATACCCAGAAATCAAACATCTGGGGTTAAGAATATAAGAAAATaGTCACATATAACCAACGTCAGGGTTCATGTTATGGATTCAATC | + |
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Preference number: 1 (lower is better) Translates to: MIPRNQTSGVKNIRK*SHITNVRVHVMDSI Trigger: GATTGAATCCATAACATGAACCCTGACGTTGGTTATATGTGAGCATTTTCTTATATTCTTAACCCCAGATGTTTGATTTCTGGGTATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR TCA 90 bp | CAAATTCACCCCACCCACCAATGTTTTTGCTACAGTGCTCTTAAGGTTACTATAATGGCAGACCGCGAATaGCTGTCCTTCACCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QIHPTHQCFCYSALKVTIMADRE*LSFTFT Trigger: TGTGAAGGTGAAGGACAGTCATTCGCGGTCTGCCAT...TATAGTAACCTTAAGAGCACTGTAGCAAAAACATTGGTGGGTGGGGTGAATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTGAACAAATGGCAACTAGGGTaGGTTACTAGGTGCTTGACT | + |
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Preference number: 2 (lower is better) Translates to: RLHTLSLYTVYNKRCVLNKWQLG*VTRCLT Trigger: AGTCAAGCACCTAGTAACTCACCCTAGTTGCCATTT...GTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTGAACTACACAGTTGACATCTaGAAGCAGGACATACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RLHTLSLYTVYNKRCVLNYTVDI*KQDIQH Trigger: GTGCTGTATGTCCTGCTTTCAGATGTCAACTGTGTA...GTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTGAACGAGGTAGAAGGTAACTaGAAACCAATGCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: RLHTLSLYTVYNKRCVLNEVEGN*KPMQHQ Trigger: CTGATGTTGCATTGGTTTTCAGTTACCTTCTACCTC...GTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR CCA 90 bp | AGACTACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTGAACTCAACCTGTTCTACCTaGAAAGATACAAATGAACCT | + |
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Preference number: 2 (lower is better) Translates to: RLHTLSLYTVYNKRCVLNSTCST*KDTNEP Trigger: AGGTTCATTTGTATCTTTCCAGGTAGAACAGGTTGA...GTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR-3UTR CAA 90 bp | GAATGGCAGACCGCGAATGACTGTCCTTCACCTTCACAAAGGAAAATGGAGTCGTACGGCTCCTGCAGCTaGCTCCTCACACGTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: EWQTANDCPSPSQRKMESYGSCS*LLTRGF Trigger: GAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTA...CGACTCCATTTTCCTTTGTGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR GCA 72 bp | TGCAACATCAGATTCAATTCTACGGCTCCTGCAGCTTaGTCCTCACACGTGGTTTCAGAAACCAAAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: CNIRFNSTAPAA*SSHVVSETKAN Trigger: GTTGGCTTTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGAATTGAATCTGATGTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050552.15 ENSMUST00000188630.7 |
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| 3UTR GCA 72 bp | AAACCAATGCAACATCAGATTCAATTCTACGGCTCCTaGAGCTTGCTCCTCACACGTGGTTTCAGAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: KPMQHQIQFYGS*SLLLTRGFRNQ Trigger: TTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGAATTGAATCTGATGTTGCATTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050552.15 ENSMUST00000188630.7 |
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| 3UTR TCA 72 bp | AACAGTCTAGCTGTATCCTGGGGTAGAACGTTTGTGTaGGGAGTTATCAACCTGTTCTACCTGGAAAGATAC | + |
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Preference number: 3 (lower is better) Translates to: NSLAVSWGRTFV*GVINLFYLERY Trigger: GTATCTTTCCAGGTAGAACAGGTTGATAACTCCTCACACAAACGTTCTACCCCAGGATACAGCTAGACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR TCA 72 bp | TCAACAATCGTATGGTTTAGTGACAAGACATTTCCTTaGTTCAGTCCTTGTGGGAACTCTTATAACAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: STIVWFSDKTFP*FSPCGNSYNSL Trigger: TAGACTGTTATAAGAGTTCCCACAAGGACTGAATCAAGGAAATGTCTTGTCACTAAACCATACGATTGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR TCA 72 bp | TTTCACTATACACAGTATATAATAAACGGTGCGTTTTaGACGACGGTTAACATGCAAGGATCTGGTTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: FHYTQYIINGAF*TTVNMQGSGCR Trigger: TCTACAACCAGATCCTTGCATGTTAACCGTCGTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR GCA 72 bp | AGAAATCAAACATCTGGGGTTAAGAATATAAGAAAATaGTCACATATAACCAACGTCAGGGTTCATGTTATG | + |
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Preference number: 3 (lower is better) Translates to: RNQTSGVKNIRK*SHITNVRVHVM Trigger: CATAACATGAACCCTGACGTTGGTTATATGTGAGCATTTTCTTATATTCTTAACCCCAGATGTTTGATTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR CCA 72 bp | TGGAAAAAGCTTGAACACTGTTATAAGTTAATTACTTaGTCACATGCATTTCCCCTCACCATCAATCATTAT | + |
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Preference number: 3 (lower is better) Translates to: WKKLEHCYKLIT*SHAFPLTINHY Trigger: ATAATGATTGATGGTGAGGGGAAATGCATGTGACCAAGTAATTAACTTATAACAGTGTTCAAGCTTTTTCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCCCAGACAACTGAATGGCAGACCGCGAATGACTGTCCTTCACCTTCACGGGACATCTGCTCCTaGAGCTCCTTTTGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GQAQTTEWQTANDCPSPSRDICS*SSFWSS Trigger: GGAGCTCCAAAAGGAGCTGCAGGAGCAGATGTCCCG...TGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTCAGTTGTCTGGGCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR TCA 90 bp | GGCCAGGCCCAGACAACTGAATGGCAGACCGCGAATGACTGTCCTTCACCTTCAATAAAATTATGTCCTTaGATGGGTCCCCACGGGACA | + |
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Preference number: 4 (lower is better) Translates to: GQAQTTEWQTANDCPSPSIKLCP*MGPHGT Trigger: TGTCCCGTGGGGACCCATTCAAGGACATAATTTTAT...TGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTCAGTTGTCTGGGCCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR TCA 90 bp | TCTACGGCTCCTGCAGCTTGCTCCTCACACGTGGTTTCAGAAACCAAAGCCAACACCAGACTATCCCAATaGCCACTGGTTCTGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: STAPAACSSHVVSETKANTRLSQ*PLVLEC Trigger: ACATTCCAGAACCAGTGGTCATTGGGATAGTCTGGT...GTTGGCTTTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR GCA 90 bp | ATGGAGTCGTACAGAGATCCTGTTAGAACACGCTCACCCAAAACACTCAACAATTCCCCACGGGACATCTaGTCCTGCAGCTCCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: MESYRDPVRTRSPKTLNNSPRDI*SCSSFW Trigger: CCAAAAGGAGCTGCAGGAGCAGATGTCCCGTGGGGA...ATTGTTGAGTGTTTTGGGTGAGCGTGTTCTAACAGGATCTCTGTACGACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR GCA 90 bp | TCTACGGCTCCTGCAGCTTGCTCCTCACACGTGGTTTCAGAAACCAAAGCCAACGCGGTAGTCAAGTTTTaGTCCAGAAGCATCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: STAPAACSSHVVSETKANAVVKF*SRSIKK Trigger: TTTCTTGATGCTTCTGGAGCAAAACTTGACTACCGC...GTTGGCTTTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050552.15 ENSMUST00000188630.7 |
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| CDS-3UTR CCA 90 bp | GAATGGCAGACCGCGAATGACTGTCCTTCACCTTCACAAAGGAAAATGGAGTCGCAACACTTTGTTTATTaGCAGGGAACAGCTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: EWQTANDCPSPSQRKMESQHFVY*QGTAPS Trigger: TGATGGAGCTGTTCCCTGCCAATAAACAAAGTGTTG...CGACTCCATTTTCCTTTGTGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CCA 90 bp | ACCAACGTCAGGGTTCATGTTATGGATTCAATCATCTACAGGATTTTCACTGATTCCTGCAGCTCCTTTTaGAGCTCCTTCCGTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TNVRVHVMDSIIYRIFTDSCSSF*SSFRAP Trigger: TGGGGCACGGAAGGAGCTCCAAAAGGAGCTGCAGGA...ATCAGTGAAAATCCTGTAGATGATTGAATCCATAACATGAACCCTGACGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| 3UTR CAA 72 bp | ATGCAACATCAGATTCAATTCTACGGCTCCTGCAGCTaGCTCCTCACACGTGGTTTCAGAAACCAAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: MQHQIQFYGSCS*LLTRGFRNQSQ Trigger: TTGGCTTTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGAATTGAATCTGATGTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050552.15 ENSMUST00000188630.7 |
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| CDS-3UTR GCA 90 bp | GAATGGCAGACCGCGAATGACTGTCCTTCACCTTCACAAAGGAAAATGGAGTCGGACACTTTTGCCCTTTaGAACATGTGCGTCTTTATA | + |
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Preference number: 4 (lower is better) Translates to: EWQTANDCPSPSQRKMESDTFAL*NMCVFI Trigger: TATAAAGACGCACATGTTGCAAAGGGCAAAAGTGTC...CGACTCCATTTTCCTTTGTGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR TCA 90 bp | ATGGAGTCGTACAGAGATCCTGTTAGAACACGCTCACCCAAAACACTCAACAATAGCTTGTTAAAAACCTaGGCGAATGCTTGCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: MESYRDPVRTRSPKTLNNSLLKT*ANACMV Trigger: GACCATGCAAGCATTCGCTCAGGTTTTTAACAAGCT...ATTGTTGAGTGTTTTGGGTGAGCGTGTTCTAACAGGATCTCTGTACGACTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR GCA 90 bp | ATGGAGTCGTACAGAGATCCTGTTAGAACACGCTCACCCAAAACACTCAACAATGCGGTAGTCAAGTTTTaGTCCAGAAGCATCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: MESYRDPVRTRSPKTLNNAVVKF*SRSIKK Trigger: TTTCTTGATGCTTCTGGAGCAAAACTTGACTACCGC...ATTGTTGAGTGTTTTGGGTGAGCGTGTTCTAACAGGATCTCTGTACGACTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR TCA 90 bp | CATGTTATGGATTCAATCATCTACAGGATTTTCACTGATGAACAGGGCTCTGGACCTCCTCAGCATTTTTaGGCCATTCTACAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: HVMDSIIYRIFTDEQGSGPPQHF*AILQTS Trigger: AGAAGTTTGTAGAATGGCTCAAAAATGCTGAGGAGG...TCCAGAGCCCTGTTCATCAGTGAAAATCCTGTAGATGATTGAATCCATAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CCA 90 bp | CATGTTATGGATTCAATCATCTACAGGATTTTCACTGATGAACAGGGCTCTGGATATCCCAATGACCACTaGTTCTGGAATGTTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: HVMDSIIYRIFTDEQGSGYPNDH*FWNVIF Trigger: AAAAATAACATTCCAGAACCAGTGGTCATTGGGATA...TCCAGAGCCCTGTTCATCAGTGAAAATCCTGTAGATGATTGAATCCATAACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCCCAGACAACTGAATGGCAGACCGCGAATGACTGTCCTTCACCTTCACTCCTGCAGCTCCTTTaGGAGCTCCTTCCGTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GQAQTTEWQTANDCPSPSLLQLL*ELLPCP Trigger: GGGGCACGGAAGGAGCTCCAAAAGGAGCTGCAGGAG...TGAAGGTGAAGGACAGTCATTCGCGGTCTGCCATTCAGTTGTCTGGGCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CAA 90 bp | TCTACGGCTCCTGCAGCTTGCTCCTCACACGTGGTTTCAGAAACCAAAGCCAACGGCGGTAGTCAAGTTTaGCTCCAGAAGCATCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: STAPAACSSHVVSETKANGGSQV*LQKHQE Trigger: TTCTTGATGCTTCTGGAGCAAAACTTGACTACCGCC...GTTGGCTTTGGTTTCTGAAACCACGTGTGAGGAGCAAGCTGCAGGAGCCGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050552.15 ENSMUST00000188630.7 |
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| CDS-3UTR CAA 90 bp | CATGTTATGGATTCAATCATCTACAGGATTTTCACTGATGAACAGGGCTCTGGAGGCGGTAGTCAAGTTTaGCTCCAGAAGCATCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: HVMDSIIYRIFTDEQGSGGGSQV*LQKHQE Trigger: TTCTTGATGCTTCTGGAGCAAAACTTGACTACCGCC...TCCAGAGCCCTGTTCATCAGTGAAAATCCTGTAGATGATTGAATCCATAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CAA 90 bp | AGACTACACACTCTTTCACTATACACAGTATATAATAAACGGTGCGTTTTGAACAAGGAGAGGGCTGTATaGCTTCAAGTGCTTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: RLHTLSLYTVYNKRCVLNKERAV*LQVLDG Trigger: GCCATCAAGCACTTGAAGCAATACAGCCCTCTCCTT...GTTCAAAACGCACCGTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS-3UTR CAA 90 bp | ACCAACGTCAGGGTTCATGTTATGGATTCAATCATCTACAGGATTTTCACTGATTCCTCCTCAGCATTTTaGAGCCATTCTACAAACTTC | + |
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Preference number: 5 (lower is better) Translates to: TNVRVHVMDSIIYRIFTDSSSAF*SHSTNF Trigger: GAAGTTTGTAGAATGGCTCAAAAATGCTGAGGAGGA...ATCAGTGAAAATCCTGTAGATGATTGAATCCATAACATGAACCCTGACGTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050552.15 |
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| CDS CCA 72 bp | ATTATTCATAAAAGACACCCCTGTCGCCTGCGGTGGTaGCCGCCGCGCCGAGCGGACCACAGGCGCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: IIHKRHPCRLRW*PPRRADHRRRG Trigger: GCCTCGGCGCCTGTGGTCCGCTCGGCGCGGCGGCCACCACCGCAGGCGACAGGGGTGTCTTTTATGAATAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186949.2 |
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| CDS CCA 72 bp | TTGATTATTCATAAAAGACACCCCTGTCGCCTGCGGTaGTGGCCGCCGCGCCGAGCGGACCACAGGCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: LIIHKRHPCRLR*WPPRRADHRRR Trigger: TCGGCGCCTGTGGTCCGCTCGGCGCGGCGGCCACCACCGCAGGCGACAGGGGTGTCTTTTATGAATAATCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186949.2 |
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