Pregenerated sensors for BYSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023988Ensembl transcript IDs: ENSMUST00000024783.9
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCCAGGATTAGGCCACGGCAGCCATAGTAGCCCTTCAGTGTCTTaGCCTAGGTCTTTAACTATACCAGCTGGGGTCCTGGGGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: CPGLGHGSHSSPSVS*PRSLTIPAGVLGWS Trigger: GGACCACCCCAGGACCCCAGCTGGTATAGTTAAAGACCTAGGTCAAGACACTGAAGGGCTACTATGGCTGCCGTGGCCTAATCCTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR TCA 90 bp | TTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTaGCAGAGCTATCTGGAGAGAGGGCAAGCCCTAGGGTCACAGGTC | + |
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Preference number: 1 (lower is better) Translates to: FIRAGLGWDGSMPWR*QSYLERGQALGSQV Trigger: GACCTGTGACCCTAGGGCTTGCCCTCTCTCCAGATAGCTCTGTCACCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 90 bp | GTGAGCAGGGACCAAAGCCTAAAATGGCAGAGAAAGCCAACCAGATaGAGTCCTCCCTGCCCAGGATTAGGCCACGGCAGCCATAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: VSRDQSLKWQRKPTR*SPPCPGLGHGSHSS Trigger: GCTACTATGGCTGCCGTGGCCTAATCCTGGGCAGGGAGGACTGCATCTGGTTGGCTTTCTCTGCCATTTTAGGCTTTGGTCCCTGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 90 bp | CAAAGCCTAAAATGGCAGAGAAAGCCAACCAGATGCAGTCCTCCCTaGCCAGGATTAGGCCACGGCAGCCATAGTAGCCCTTCAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QSLKWQRKPTRCSPP*PGLGHGSHSSPSVS Trigger: AGACACTGAAGGGCTACTATGGCTGCCGTGGCCTAATCCTGGGCAGGGAGGACTGCATCTGGTTGGCTTTCTCTGCCATTTTAGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 90 bp | GGACCCTTACACAGAACCCTAAGATTCATACGACATCAGGCATGGTaGTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: GPLHRTLRFIRHQAW*FLSTLRADRGRGLA Trigger: GGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTGATGTCGTATGAATCTTAGGGTTCTGTGTAAGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 90 bp | GCTGGACCCTTACACAGAACCCTAAGATTCATACGACATCAGGCATaGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: AGPLHRTLRFIRHQA*CFLSTLRADRGRGL Trigger: TAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTGATGTCGTATGAATCTTAGGGTTCTGTGTAAGGGTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 90 bp | AGGGCAAGCCCTAGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTaGGCTGGTGGCCCATTTCTATCATGCTGCCTTAATAAAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: RASPRVTGLSSGHKV*AGGPFLSCCLNKDF Trigger: GAAATCTTTATTAAGGCAGCATGATAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCTAGGGCTTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR TCA 90 bp | ACCAGACAGTATTCTTTGCTCATTAGTTATGCAGACACAGGAACCTaGCCTGGCGTCTCAGCCAGCCTAAAGCTCTGGTTGCTTGATAGC | + |
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Preference number: 1 (lower is better) Translates to: TRQYSLLISYADTGT*PGVSASLKLWLLDS Trigger: GCTATCAAGCAACCAGAGCTTTAGGCTGGCTGAGACGCCAGGTCAGGTTCCTGTGTCTGCATAACTAATGAGCAAAGAATACTGTCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 90 bp | CTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTATCATaGTGCCTTAATAAAGATTTCGGAATAAAGGTGGCTCTTGTGATC | + |
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Preference number: 1 (lower is better) Translates to: LSSGHKVWAGGPFLS*CLNKDFGIKVALVI Trigger: GATCACAAGAGCCACCTTTATTCCGAAATCTTTATTAAGGCAGCATGATAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGGGGAGGAGCCAGCAGTaGCTCCCACCTCTCCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SSPLLLLCGPGAATAWDGGRSQQ*LPPLPW Trigger: CCACGGGAGAGGTGGGAGTCACTGCTGGCTCCTCCC...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGCTCCCACCTCTCCCGTaGGTGACAGGGGAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPSSPLLLLCGPGAATAWLPPLP*VTGERG Trigger: GCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAG...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCAGACCTTATACCAACTaGCAGGTGGGTTGTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TPTSPVGDRGERQGPPGTRPYTN*QVGCGV Trigger: GACCCCACAACCCACCTGGCAGTTGGTATAAGGTCT...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCTACCAGCTGGGGTCCTaGGGTGGTCCTGCGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSYQLGS*GGPAPP Trigger: AGGGGGCGCAGGACCACCCCAGGACCCCAGCTGGTA...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCCCCGCTCTTCTGAGCTaGGGACAGGGAGGAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QAWCFLSTLRADRGRGLAPALLS*GQGGAS Trigger: GCTGGCTCCTCCCTGTCCCCAGCTCAGAAGAGCGGG...GGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCAAGAACCCGCTCTTCTaGGCTGGGGACAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QAWCFLSTLRADRGRGLAKNPLF*AGDREE Trigger: CTCCTCCCTGTCCCCAGCTCAGAAGAGCGGGTTCTT...GGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTATGGTCCTGCGCCCCCTaGGCCAACACAGGTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLWSCAP*ANTGDC Trigger: ACAGTCACCTGTGTTGGCCCAGGGGGCGCAGGACCA...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGTCGATGCCGTGGAGGTaGCAGAGCTATCTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPSSPLLLLCGPGAATAWSMPWR*QSYLER Trigger: TCTCTCCAGATAGCTCTGTCACCTCCACGGCATCGA...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGAGAAAGCCAACCAGATaGAGTCCTCCCTGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSPLLLLCGPGAATAWDGRKPTR*SPPCPG Trigger: TCCTGGGCAGGGAGGACTGCATCTGGTTGGCTTTCT...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGCTTCCTCAGTGGTGCTaGAAAGGAGCAGCCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LPSSPLLLLCGPGAATAWLPQWC*KGAALH Trigger: ATGCAGGGCTGCTCCTTTGCAGCACCACTGAGGAAG...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTGCCCTTCCTCAGTGGTaGTGCAAAGGAGCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: WCFLSTLRADRGRGLACAALPQW*CKGAAL Trigger: CAGGGCTGCTCCTTTGCAGCACCACTGAGGAAGGGC...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTGAACCATCAGGCAGGTaGGTGGCCAAGTTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WCFLSTLRADRGRGLACAEPSGR*VAKFKV Trigger: GACCTTGAACTTGGCCACCCACCTGCCTGATGGTTC...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGGCAGAGCACTTTTCCTaGGAAGGGTTAGAAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SSPLLLLCGPGAATAWDGAEHFS*EGLERC Trigger: GCACCTTTCTAACCCTTCCCAGGAAAAGTGCTCTGC...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGAGCACTGGCTACTCCTaGGAGCCTGGACTCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRSTGYS*EPGLNS Trigger: GGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTGCT...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | GGTAGTGTTTCACAGCAGTGGCTGGCCTCAAACTTACAGATCCATGGTTGGCTGAGATGCAGTCCTCCCTaGCCAGGATTAGGCCACGGC | + |
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Preference number: 2 (lower is better) Translates to: GSVSQQWLASNLQIHGWLRCSPP*PGLGHG Trigger: GCCGTGGCCTAATCCTGGGCAGGGAGGACTGCATCT...CAGCCAACCATGGATCTGTAAGTTTGAGGCCAGCCACTGCTGTGAAACACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGGCTGCGATAAATAAATaGCTGTTTTCTCCGCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SSPLLLLCGPGAATAWDGAAINK*LFSPHP Trigger: GGGGTGCGGAGAAAACAGGCATTTATTTATCGCAGC...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCCTGACAGTGAACCACTaGCACTTTTCCAACAGACAC | + |
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Preference number: 2 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSLTVNH*HFSNRH Trigger: GTGTCTGTTGGAAAAGTGGCAGTGGTTCACTGTCAG...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCAGCCCTTCAGTGTCTTaGCCTAGGTCTTTAACTATA | + |
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Preference number: 2 (lower is better) Translates to: QAWCFLSTLRADRGRGLASPSVS*PRSLTI Trigger: TATAGTTAAAGACCTAGGTCAAGACACTGAAGGGCT...GGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGCTGTGTAAGCAAATATaGACTCAACAGACCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: LPSSPLLLLCGPGAATAWLCKQI*TQQTKP Trigger: AGGTTTGGTCTGTTGAGTTCATATTTGCTTACACAG...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | GGTAGTGTTTCACAGCAGTGGCTGGCCTCAAACTTACAGATCCATGGTTGGCTGCCCCTAGCAAGGGCCTaGAATATAGTCTTCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSVSQQWLASNLQIHGWLPLARA*NIVFPD Trigger: GTCAGGGAAGACTATATTGCAGGCCCTTGCTAGGGG...CAGCCAACCATGGATCTGTAAGTTTGAGGCCAGCCACTGCTGTGAAACACTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTAAAGAGGGCTAGCCTGTaGTACATAGTGCAGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLKRASL*YIVQNF Trigger: AAAGTTCTGCACTATGTAGCACAGGCTAGCCCTCTT...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCGACCAAAGCCTAAAATaGCAGAGAAAGCCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSDQSLK*QRKPTR Trigger: TCTGGTTGGCTTTCTCTGCCATTTTAGGCTTTGGTC...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTGTTGTTGTTTTTGGTaGGGTAGTGTTTCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRCCCFW*GSVSQQ Trigger: CTGCTGTGAAACACTACCTCACCAAAAACAACAACA...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTCCAGACAGTATTCTTTaGTCATTAGTTATGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: WCFLSTLRADRGRGLACAPDSIL*SLVMQT Trigger: TGTCTGCATAACTAATGAGCAAAGAATACTGTCTGG...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCTACTCCTGAGAGCCTGGACTCAATTCCCAGCAGTTAACCATTTTAAATCAGCTGTGATGCAATaGTCTAAGGGTTTTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: HWLLLRAWTQFPAVNHFKSAVMQ*SKGFCC Trigger: ACAACAAAAACCCTTAGACCATTGCATCACAGCTGA...TTTAAAATGGTTAACTGCTGGGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCTACTCCTGAGAGCCTGGACTCAATTCCCAGCAGTTAACCATTTTAAACTCAGATATACAAACTaGATTGTTATAGACACACGT | + |
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Preference number: 2 (lower is better) Translates to: HWLLLRAWTQFPAVNHFKLRYTN*IVIDTR Trigger: ACGTGTGTCTATAACAATCCAGTTTGTATATCTGAG...TTTAAAATGGTTAACTGCTGGGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 72 bp | GCACTTCCCCTAGCAGGGAGGCAGGCCCTTCCTCAGTaGTGCTGCAAAGGAGCAGCCCTGCATGGGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ALPLAGRQALPQ*CCKGAALHGRG Trigger: TCCTCTCCCATGCAGGGCTGCTCCTTTGCAGCACCACTGAGGAAGGGCCTGCCTCCCTGCTAGGGGAAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 72 bp | CTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTaGGATGGGGGTCACGCCTTCCTCTCCTCACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLLLCGPGAATA*DGGHAFLSSPL Trigger: GAGGGGTGAGGAGAGGAAGGCGTGACCCCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 72 bp | TTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTaGTACAGCCTGGGATGGGGGTCACGCCTTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FFPSATALWPRS*YSLGWGSRLPL Trigger: GAGAGGAAGGCGTGACCCCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR TCA 72 bp | GCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTaGCAGAGCTATCTGGAGAGAGGGCAAGCCCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: AGLGWDGSMPWR*QSYLERGQALG Trigger: CCCTAGGGCTTGCCCTCTCTCCAGATAGCTCTGTCACCTCCACGGCATCGATCCATCCCAACCTAACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR TCA 72 bp | GGAGAGGAAGAGGGAGGGAGGAAGGGAGGGAGAGCTTaGGTGAGCTCAGGGAGTAATTTGGTTGGGTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GEEEGGRKGGRA*VSSGSNLVGLG Trigger: GCCCAACCCAACCAAATTACTCCCTGAGCTCACTCAAGCTCTCCCTCCCTTCCTCCCTCCCTCTTCCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CAA 90 bp | CAGGCATGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCCTAGCCCTCAAAAAGTaGAACCATCAGGCAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QAWCFLSTLRADRGRGLALALKK*NHQAGG Trigger: CCCACCTGCCTGATGGTTCAACTTTTTGAGGGCTAG...GGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 72 bp | AAATGGCAGAGAAAGCCAACCAGATGCAGTCCTCCCTaGCCAGGATTAGGCCACGGCAGCCATAGTAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: KWQRKPTRCSPP*PGLGHGSHSSP Trigger: AGGGCTACTATGGCTGCCGTGGCCTAATCCTGGGCAGGGAGGACTGCATCTGGTTGGCTTTCTCTGCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGTGGGTTGGGCTAGGTTaGTTCTCTTTGCTTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: SSPLLLLCGPGAATAWDGWVGLG*FSLLFP Trigger: AGGGAAAAGCAAAGAGAACAAACCTAGCCCAACCCA...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR GCA 72 bp | CACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTaGTACATAGTGCAGAACTTTGGCTCAGCGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: HTQGRQRKRASL*YIVQNFGSATA Trigger: TGCTGTCGCTGAGCCAAAGTTCTGCACTATGTAGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 72 bp | AAGGTGCCGCCTAGGCAGCATGGCCTGCTTTCCTTGTaGACGAATTACAGCGCTAAGGAGCAGCCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: KVPPRQHGLLSL*TNYSAKEQPAL Trigger: TAATGCTGGCTGCTCCTTAGCGCTGTAATTCGTCCACAAGGAAAGCAGGCCATGCTGCCTAGGCGGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 72 bp | TGTTTTCTCCGCACCCCAGCGAGCTTACACAGTATCTaGAGAGAGCAGACCTTATACCAACTGCCAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CFLRTPASLHSI*REQTLYQLPGG Trigger: CCCACCTGGCAGTTGGTATAAGGTCTGCTCTCTCCAGATACTGTGTAAGCTCGCTGGGGTGCGGAGAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR CCA 72 bp | CCTAGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTaGGCTGGTGGCCCATTTCTATCATGCTGCCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: PRVTGLSSGHKV*AGGPFLSCCLN Trigger: ATTAAGGCAGCATGATAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| 3UTR TCA 72 bp | TTAGGCCACGGCAGCCATAGTAGCCCTTCAGTGTCTTaGCCTAGGTCTTTAACTATACCAGCTGGGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGHGSHSSPSVS*PRSLTIPAGVL Trigger: CAGGACCCCAGCTGGTATAGTTAAAGACCTAGGTCAAGACACTGAAGGGCTACTATGGCTGCCGTGGCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR CCA 72 bp | AAGCCTAGCCCTCAAAAAGTTGAACCATCAGGCAGGTaGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPSPQKVEPSGR*VAKFKVSLVYR Trigger: TCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGATGGTTCAACTTTTTGAGGGCTAGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGCTTACAGATCCATGGTaGGCTGCTACTAAAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPSSPLLLLCGPGAATAWLTDPW*AATKIS Trigger: TGAAATTTTAGTAGCAGCCAACCATGGATCTGTAAG...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTTTTTCCTGATTCTGTaGTGTCACTGTCCCCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRFFLIL*CHCPLA Trigger: TGCTAGGGGACAGTGACACAACAGAATCAGGAAAAA...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR GCA 72 bp | CACAGAACCCTAAGATTCATACGACATCAGGCATGGTaGTTCCTTAGCACACTCAGGGCAGACAGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HRTLRFIRHQAW*FLSTLRADRGR Trigger: TCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCATGCCTGATGTCGTATGAATCTTAGGGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR CCA 72 bp | TTGGCTCAGCGACAGCACTGGCTACTCCTGAGAGCCTaGACTCAATTCCCAGCAGTTAACCATTTTAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LAQRQHWLLLRA*TQFPAVNHFKL Trigger: GAGTTTAAAATGGTTAACTGCTGGGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTGCTGTCGCTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR TCA 72 bp | ATTTATTGCTTTGAATACAACTGTAAGAGGGTACAGTaGGGCCTGTACCCCACAAGTGGTGGTAACCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IYCFEYNCKRVQ*GLYPTSGGNPG Trigger: GCCAGGGTTACCACCACTTGTGGGGTACAGGCCTCACTGTACCCTCTTACAGTTGTATTCAAAGCAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCACCCGGGGATCCAGCTaGGGCATAGGGAAGCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPTSPVGDRGERQGPPGTTRGSS*GIGKPD Trigger: ATCGGGCTTCCCTATGCCTCAGCTGGATCCCCGGGT...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCGCTGCAAAATCCGTCTaGTTAGCCGGGGTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPTSPVGDRGERQGPPGTAAKSV*LAGVPH Trigger: ATGTGGGACCCCGGCTAAGCAGACGGATTTTGCAGC...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGTCAGCAGGCACTGGTaGCAGAGGACAGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPLLLLCGPGAATAWVSRHW*QRTGSW Trigger: CCAGCTGCCTGTCCTCTGGCACCAGTGCCTGCTGAC...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGCTGGGGACAGCGCTCTaGAGCTCACGCCTGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLLLLCGPGAATAWDGLGTAL*SSRLIS Trigger: TGAGATCAGGCGTGAGCTTCAGAGCGCTGTCCCCAG...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCGTCCACGATCACCTCTaGCTGGTGGTCCACCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSVHDHL*LVVHPG Trigger: GCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGAC...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGATGGGCACGGAGGGTACAGGTaGCGGACTCACACAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLLLLCGPGAATAWDGHGGYR*RTHTVG Trigger: TCCCACTGTGTGAGTCCGGCACCTGTACCCTCCGTG...CCCATCCCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTAATGGCCGCACTGGAGTaGAGCACGGGGATGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLMAALE*STGMEH Trigger: GTGCTCCATCCCCGTGCTGCACTCCAGTGCGGCCAT...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTATTCCCAGCCAGGATCTaGTCGGCCAGAGGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLFPARI*SARGAC Trigger: GCATGCACCTCTGGCCGAGCAGATCCTGGCTGGGAA...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTCCCGGCCATTTTGGCTaGCTTCTCCAGGGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WCFLSTLRADRGRGLACAPGHFG*LLQGRP Trigger: TGGCCTACCCTGGAGAAGGCAGCCAAAATGGCCGGG...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGTGTCAGCAGGCACTaGTGCCAGAGGACAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSSVSRH*CQRTGS Trigger: GCTGCCTGTCCTCTGGCACCAGTGCCTGCTGACACT...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCGAGGATTCTTGTTCATaGACATTTCAATGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTSPVGDRGERQGPPGTEDSCS*TFQWHA Trigger: AGCGTGCCATTGAAATGTTCATGAACAAGAATCCTC...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGCAGACCTTATACCAACTGCCAGGTGGGTTGTGGGGTCGCTGAACCGAACAGGCCTCAGGCTCAGTaGCATAGAGGATCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPYTNCQVGCGVAEPNRPQAQ*HRGSAP Trigger: GGGAGCAGATCCTCTATGTCACTGAGCCTGAGGCCT...GTTCGGTTCAGCGACCCCACAACCCACCTGGCAGTTGGTATAAGGTCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGTCTCCACCTCTGTCTaGTTCTCCGTCAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPLLLLCGPGAATAWVSTSV*FSVNFS Trigger: GGAGAAGTTGACGGAGAAGCAGACAGAGGTGGAGAC...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGACCTTATACCAACTGCCAGGTGGGTTGTGGGGTCGCTGAACCGAACTTGATACATGGCGGCTaGAGTCCAGGCCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPYTNCQVGCGVAEPNLIHGG*SPGLRL Trigger: GAGCCTGAGGCCTGGACTGCAGCCGCCATGTATCAA...GTTCGGTTCAGCGACCCCACAACCCACCTGGCAGTTGGTATAAGGTCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTCGGAAGGCCAGAAAGTaGAAGACCAGAGCGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCFLSTLRADRGRGLACARKARK*KTRASS Trigger: GCTCGACGCTCTGGTCTTCCACTTTCTGGCCTTCCG...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTAGTTTCGAGCTCCTCCTaGTGTTGTCTGGCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLVSSSS*CCLACC Trigger: GCAGCAAGCCAGACAACAGCAGGAGGAGCTCGAAAC...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTGGTGGCTTGATACATaGCGGCTGCAGTCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRWWLDT*RLQSRP Trigger: AGGCCTGGACTGCAGCCGCCATGTATCAAGCCACCA...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGAGGCAAAAATCCTGGTaGCTTGATACATGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPLLLLCGPGAATAWRQKSW*LDTWRL Trigger: CAGCCGCCATGTATCAAGCCACCAGGATTTTTGCCT...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR CAA 72 bp | AGAAAGGTGCCGCCTAGGCAGCATGGCCTGCTTTCCTaGTGGACGAATTACAGCGCTAAGGAGCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKVPPRQHGLLS*WTNYSAKEQPA Trigger: TGCTGGCTGCTCCTTAGCGCTGTAATTCGTCCACAAGGAAAGCAGGCCATGCTGCCTAGGCGGCACCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTACCGATACCTCTGACATaGCAGTCTCCACCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLPIPLT*QSPPLS Trigger: AGACAGAGGTGGAGACTGTCATGTCAGAGGTATCGG...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | CACTGGCTACTCCTGAGAGCCTGGACTCAATTCCCAGCAGTTAACCATTTTAAAGGTCCCCGCGCGCACTaGGTTCCCAGCCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HWLLLRAWTQFPAVNHFKGPRAH*VPSQDL Trigger: CAGATCCTGGCTGGGAACGCAGTGCGCGCGGGGACC...TTTAAAATGGTTAACTGCTGGGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTTTCCTCGGGCCACAAGGTTTGGGCTGGTGGCCCATTTCTACCTCCTGCTGTTGTCTaGCTTGCTGCAAAATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLSSGHKVWAGGPFLPPAVV*LAAKSV Trigger: GACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGG...TAGAAATGGGCCACCAGCCCAAACCTTGTGGCCCGAGGAAAGACCTGTGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTTCTTCCCCTCTGCTACTGCTTTGTGGCCCAGGAGCTGCTACAGCCTGGGCAGGAAGATGCTGTTaGCACCGCTGTATTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPLLLLCGPGAATAWAGRCC*HRCIPF Trigger: AAATGGAATACAGCGGTGCCAACAGCATCTTCCTGC...CCAGGCTGTAGCAGCTCCTGGGCCACAAAGCAGTAGCAGAGGGGAAGAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGACCTTATACCAACTGCCAGGTGGGTTGTGGGGTCGCTGAACCGAACCTCCCAGTTGGACAGTaGAGGGATGACCTTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPYTNCQVGCGVAEPNLPVGQ*RDDLKS Trigger: GCTTTTAAGGTCATCCCTGCACTGTCCAACTGGGAG...GTTCGGTTCAGCGACCCCACAACCCACCTGGCAGTTGGTATAAGGTCTGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGACCTTATACCAACTGCCAGGTGGGTTGTGGGGTCGCTGAACCGAACGCTGTATTCCATTTCTaGGATCTTCAGCATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPYTNCQVGCGVAEPNAVFHF*DLQHGR Trigger: GCGGCCATGCTGAAGATCGCAGAAATGGAATACAGC...GTTCGGTTCAGCGACCCCACAACCCACCTGGCAGTTGGTATAAGGTCTGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGTGTAGAGGTGAAAGTTaGGTCGTTTGTATTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRCRGES*VVCIQQ Trigger: TTGCTGAATACAAACGACTCAACTTTCACCTCTACA...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGTCTGAAGCTCACGCCTaGTCTCAGGGGACAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKSEAHA*SQGTAA Trigger: CGCAGCTGTCCCCTGAGATCAGGCGTGAGCTTCAGA...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGCGATCACCAGCCCCATaGTCAGTTTCGAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKRSPAP*SVSSSS Trigger: GGAGGAGCTCGAAACTGACCATGGGGCTGGTGATCG...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| 3UTR CAA 72 bp | AATAATACAAAGATTGTAAGCCTAGCCCTCAAAAAGTaGAACCATCAGGCAGGTGGGTGGCCAAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTKIVSLALKK*NHQAGGWPSSR Trigger: CCTTGAACTTGGCCACCCACCTGCCTGATGGTTCAACTTTTTGAGGGCTAGGCTTACAATCTTTGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGCCTCCTTCTGCTCTGTaGCCAGGTCAGCCTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKPPSAL*PGQPYS Trigger: GCTATAAGGCTGACCTGGCCACAGAGCAGAAGGAGG...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR TCA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGCTCATCCTCCTCATCTaGTCCATCCTGTGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKLILLI*SILWQS Trigger: GGATTGCCACAGGATGGATCAGATGAGGAGGATGAG...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGCACGCGGTAGGGCAATaGGTACTTCTTATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKHAVGQ*VLLIQQ Trigger: CTGCTGGATAAGAAGTACGCATTGCCCTACCGCGTG...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS TCA 90 bp | TGGCAATCCCGGCCCCAGCCGCGTGGCGCGCTCTCGCGGTGGTGCTaGCCGATCACCAGCCCCATGGTCAGTTTCGAGCTCCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WQSRPQPRGALSRWC*PITSPMVSFELLLL Trigger: CAGCAGGAGGAGCTCGAAACTGACCATGGGGCTGGTGATCGGTCAGCACCACCGCGAGAGCGCGCCACGCGGCTGGGGCCGGGATTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS CCA 90 bp | CCTCCTCATCTGATCCATCCTGTGGCAATCCCGGCCCCAGCCGCGTaGCGCGCTCTCGCGGTGGTGCTGACCGATCACCAGCCCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPHLIHPVAIPAPAA*RALAVVLTDHQPHG Trigger: ACCATGGGGCTGGTGATCGGTCAGCACCACCGCGAGAGCGCGCCACGCGGCTGGGGCCGGGATTGCCACAGGATGGATCAGATGAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS TCA 90 bp | TTTGGCTGCCTTCTCCAGGGTAGGCCACTCCTCATCCTCCTCATCTaGTCCATCCTGTGGCAATCCCGGCCCCAGCCGCGTGGCGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGCLLQGRPLLILLI*SILWQSRPQPRGAL Trigger: GAGCGCGCCACGCGGCTGGGGCCGGGATTGCCACAGGATGGATCAGATGAGGAGGATGAGGAGTGGCCTACCCTGGAGAAGGCAGCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS CCA 90 bp | GGGGCTGCAGCCGAAGCAGCTCCAGGAGGGCCTCCTTCTGCTCTGTaGCCAGGTCAGCCTTATAGCGCTGCGCTAGTGTCAGCAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GAAAEAAPGGPPSAL*PGQPYSAALVSAGT Trigger: AGTGCCTGCTGACACTAGCGCAGCGCTATAAGGCTGACCTGGCCACAGAGCAGAAGGAGGCCCTCCTGGAGCTGCTTCGGCTGCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS GCA 90 bp | GCGCGCACTGCGTTCCCAGCCAGGATCTGCTCGGCCAGAGGTGCATaGTTCTCCCGATTGCTGGCCCCACGTGTCACCTTGAATTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTAFPARICSARGA*FSRLLAPRVTLNLG Trigger: GCCCAAATTCAAGGTGACACGTGGGGCCAGCAATCGGGAGAAGCATGCACCTCTGGCCGAGCAGATCCTGGCTGGGAACGCAGTGCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS GCA 90 bp | CCCCGCGCGCACTGCGTTCCCAGCCAGGATCTGCTCGGCCAGAGGTaGATGCTTCTCCCGATTGCTGGCCCCACGTGTCACCTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PRAHCVPSQDLLGQR*MLLPIAGPTCHLEF Trigger: AAATTCAAGGTGACACGTGGGGCCAGCAATCGGGAGAAGCATGCACCTCTGGCCGAGCAGATCCTGGCTGGGAACGCAGTGCGCGCGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCGGGATCAGGATTCCTTaGAACCAGGCTCCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPTSPVGDRGERQGPPGTGIRIP*NQAPGL Trigger: CAAGCCTGGAGCCTGGTTCAAAGGAATCCTGATCCC...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCCACCTCTCCCGTGGGTGACAGGGGAGAGAGGCAGGGACCTCCAGGGACCCGCAGGAAGATGCTGTaGGCACCGCTGTATTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TPTSPVGDRGERQGPPGTRRKML*APLYSI Trigger: AATGGAATACAGCGGTGCCAACAGCATCTTCCTGCG...GGTCCCTGGAGGTCCCTGCCTCTCTCCCCTGTCACCCACGGGAGAGGTGGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
||
| CDS CCA 90 bp | TCAATGGCACGCTCATCTTCAGGGTCCACGATCACCTCTGCCTGGTaGTCCACCCCGGCCATTTTGGCTGCCTTCTCCAGGGTAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMARSSSGSTITSAW*STPAILAAFSRVGH Trigger: GTGGCCTACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGAAGATGAGCGTGCCATTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 90 bp | CAGCAGGCGCAGGAAGATGCTGTTGGCACCGCTGTATTCCATTTCTaGGATCTTCAGCATGGCCGCACTGGAGTGCAGCACGGGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: QQAQEDAVGTAVFHF*DLQHGRTGVQHGDG Trigger: TCCATCCCCGTGCTGCACTCCAGTGCGGCCATGCTGAAGATCGCAGAAATGGAATACAGCGGTGCCAACAGCATCTTCCTGCGCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 90 bp | GGCCAGAAAGTGGAAGACCAGAGCGTCGAGCACGCGGTAGGGCAATaGGTACTTCTTATCCAGCAGCAGGCGCAGGAAGATGCTGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GQKVEDQSVEHAVGQ*VLLIQQQAQEDAVG Trigger: GCCAACAGCATCTTCCTGCGCCTGCTGCTGGATAAGAAGTACGCATTGCCCTACCGCGTGCTCGACGCTCTGGTCTTCCACTTTCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CCA 90 bp | ATTTCAATGGCACGCTCATCTTCAGGGTCCACGATCACCTCTGCCTaGTGGTCCACCCCGGCCATTTTGGCTGCCTTCTCCAGGGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISMARSSSGSTITSA*WSTPAILAAFSRVG Trigger: GCCTACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGAAGATGAGCGTGCCATTGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 90 bp | GAACATTTCAATGGCACGCTCATCTTCAGGGTCCACGATCACCTCTaGCTGGTGGTCCACCCCGGCCATTTTGGCTGCCTTCTCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: EHFNGTLIFRVHDHL*LVVHPGHFGCLLQG Trigger: ACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGAAGATGAGCGTGCCATTGAAATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 90 bp | TTTCGAGCTCCTCCTGCTGTTGTCTGGCTTGCTGCAAAATCCGTCTaGTTAGCCGGGGTCCCACATACTCTTCCTCCTCTTCGACCTCAC | + |
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Preference number: 5 (lower is better) Translates to: FRAPPAVVWLAAKSV*LAGVPHTLPPLRPH Trigger: GTGAGGTCGAAGAGGAGGAAGAGTATGTGGGACCCCGGCTAAGCAGACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGGAGCTCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS-3UTR CAA 90 bp | TGGTGCTTCCTTAGCACACTCAGGGCAGACAGAGGAAGAGGGCTAGCCTGTGCTATGACCTTAAAAGCCTaGGGCAGTTTCCCACTGCGG | + |
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Preference number: 5 (lower is better) Translates to: WCFLSTLRADRGRGLACAMTLKA*GSFPLR Trigger: CCGCAGTGGGAAACTGCCCAAGGCTTTTAAGGTCAT...AGCACAGGCTAGCCCTCTTCCTCTGTCTGCCCTGAGTGTGCTAAGGAAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS-3UTR CAA 90 bp | CACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCGATGCCGTGGAGGGAGCTCCTCCTGCTGTaGTCTGGCTTGCTGCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: HLIFIRAGLGWDGSMPWRELLLL*SGLLQN Trigger: ATTTTGCAGCAAGCCAGACAACAGCAGGAGGAGCTC...CCTCCACGGCATCGATCCATCCCAACCTAACCCTGCTCTGATGAAGATGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 90 bp | ATAGGGAAGCCCGATACCTCTGACATGACAGTCTCCACCTCTGTCTaGTTCTCCGTCAACTTCTCCATGATGATATCAGCCAGGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: IGKPDTSDMTVSTSV*FSVNFSMMISARVR Trigger: GCGCACCCTGGCTGATATCATCATGGAGAAGTTGACGGAGAAGCAGACAGAGGTGGAGACTGTCATGTCAGAGGTATCGGGCTTCCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS-3UTR CAA 90 bp | CACTGGCTACTCCTGAGAGCCTGGACTCAATTCCCAGCAGTTAACCATTTTAAAACGGGGATGGAGCACTaGGTGATGATGCTGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: HWLLLRAWTQFPAVNHFKTGMEH*VMMLPT Trigger: CGTGGGCAGCATCATCACCAAGTGCTCCATCCCCGT...TTTAAAATGGTTAACTGCTGGGAATTGAGTCCAGGCTCTCAGGAGTAGCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS-3UTR CAA 90 bp | TCAGGCAGGTGGGTGGCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCCTCACGGGAGGATTCTaGTTCATGAACATTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SGRWVAKFKVSLVYRVSSLTGGF*FMNISM Trigger: CATTGAAATGTTCATGAACAAGAATCCTCCCGTGAG...GGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGCCACCCACCTGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS-3UTR CAA 90 bp | CCAAACCTTCTCAGATATACAAACTGGATTGTTATAGACACACGTTTTCAAAAGTCCACCCCGGCCATTTaGGCTGCCTTCTCCAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PNLLRYTNWIVIDTRFQKSTPAI*AAFSRV Trigger: TACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGA...CTTTTGAAAACGTGTGTCTATAACAATCCAGTTTGTATATCTGAGAAGGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS TCA 72 bp | CGGCCCCAGCCGCGTGGCGCGCTCTCGCGGTGGTGCTaGCCGATCACCAGCCCCATGGTCAGTTTCGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RPQPRGALSRWC*PITSPMVSFEL Trigger: GAGCTCGAAACTGACCATGGGGCTGGTGATCGGTCAGCACCACCGCGAGAGCGCGCCACGCGGCTGGGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CGGGTCCCCGCGCGCACTGCGTTCCCAGCCAGGATCTaGTCGGCCAGAGGTGCATGCTTCTCCCGATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RVPARTAFPARI*SARGACFSRLL Trigger: CAGCAATCGGGAGAAGCATGCACCTCTGGCCGAGCAGATCCTGGCTGGGAACGCAGTGCGCGCGGGGACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS TCA 72 bp | ACACCACCATCCTCCACGTCTCTGGGGACAGCGCTCTaGAGCTCACGCCTGATCTCAGGGGACAGCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TPPSSTSLGTAL*SSRLISGDSCG Trigger: CCCGCAGCTGTCCCCTGAGATCAGGCGTGAGCTTCAGAGCGCTGTCCCCAGAGACGTGGAGGATGGTGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | GCGTTCCCAGCCAGGATCTGCTCGGCCAGAGGTGCATaGTTCTCCCGATTGCTGGCCCCACGTGTCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: AFPARICSARGA*FSRLLAPRVTL Trigger: CAAGGTGACACGTGGGGCCAGCAATCGGGAGAAGCATGCACCTCTGGCCGAGCAGATCCTGGCTGGGAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CACCTCTGCCTGGTGGTCCACCCCGGCCATTTTGGCTaGCTTCTCCAGGGTAGGCCACTCCTCATCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HLCLVVHPGHFG*LLQGRPLLILL Trigger: GAGGAGGATGAGGAGTGGCCTACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS TCA 72 bp | CTTCTCCAGGGTAGGCCACTCCTCATCCTCCTCATCTaGTCCATCCTGTGGCAATCCCGGCCCCAGCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: LLQGRPLLILLI*SILWQSRPQPR Trigger: ACGCGGCTGGGGCCGGGATTGCCACAGGATGGATCAGATGAGGAGGATGAGGAGTGGCCTACCCTGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CCA 72 bp | CGCTCATCTTCAGGGTCCACGATCACCTCTGCCTGGTaGTCCACCCCGGCCATTTTGGCTGCCTTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSSSGSTITSAW*STPAILAAFSR Trigger: CCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGAAGATGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CCA 72 bp | GCACGCTCATCTTCAGGGTCCACGATCACCTCTGCCTaGTGGTCCACCCCGGCCATTTTGGCTGCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ARSSSGSTITSA*WSTPAILAAFS Trigger: GGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGAAGATGAGCGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CCA 72 bp | GCCGAAGCAGCTCCAGGAGGGCCTCCTTCTGCTCTGTaGCCAGGTCAGCCTTATAGCGCTGCGCTAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: AEAAPGGPPSAL*PGQPYSAALVS Trigger: TGACACTAGCGCAGCGCTATAAGGCTGACCTGGCCACAGAGCAGAAGGAGGCCCTCCTGGAGCTGCTTCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CAA 90 bp | TCAGGGTCCACGATCACCTCTGCCTGGTGGTCCACCCCGGCCATTTaGGCTGCCTTCTCCAGGGTAGGCCACTCCTCATCCTCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SGSTITSAWWSTPAI*AAFSRVGHSSSSSS Trigger: AGATGAGGAGGATGAGGAGTGGCCTACCCTGGAGAAGGCAGCCAAAATGGCCGGGGTGGACCACCAGGCAGAGGTGATCGTGGACCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | GTGGAAGACCAGAGCGTCGAGCACGCGGTAGGGCAATaGGTACTTCTTATCCAGCAGCAGGCGCAGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VEDQSVEHAVGQ*VLLIQQQAQED Trigger: ATCTTCCTGCGCCTGCTGCTGGATAAGAAGTACGCATTGCCCTACCGCGTGCTCGACGCTCTGGTCTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CCA 72 bp | GGCTTCACGGAGGGTACAGGTGCCGGACTCACACAGTaGGATCAGGATTCCTTTGAACCAGGCTCCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GFTEGTGAGLTQ*DQDSFEPGSRL Trigger: AAGCCTGGAGCCTGGTTCAAAGGAATCCTGATCCCACTGTGTGAGTCCGGCACCTGTACCCTCCGTGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS TCA 72 bp | GGGATCCAGCTGAGGCATAGGGAAGCCCGATACCTCTaGCATGACAGTCTCCACCTCTGTCTGCTTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: GIQLRHREARYL*HDSLHLCLLLR Trigger: ACGGAGAAGCAGACAGAGGTGGAGACTGTCATGTCAGAGGTATCGGGCTTCCCTATGCCTCAGCTGGATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | TGGTCAGTTTCGAGCTCCTCCTGCTGTTGTCTGGCTTaGTGCAAAATCCGTCTGCTTAGCCGGGGTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: WSVSSSSCCCLA*CKIRLLSRGPT Trigger: TGTGGGACCCCGGCTAAGCAGACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGGAGCTCGAAACTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CCTCCTGCTGTTGTCTGGCTTGCTGCAAAATCCGTCTaGTTAGCCGGGGTCCCACATACTCTTCCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PPAVVWLAAKSV*LAGVPHTLPPL Trigger: AAGAGGAGGAAGAGTATGTGGGACCCCGGCTAAGCAGACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | TCAGTTTCGAGCTCCTCCTGCTGTTGTCTGGCTTGCTaGAAAATCCGTCTGCTTAGCCGGGGTCCCACATAC | + |
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Preference number: 6 (lower is better) Translates to: SVSSSSCCCLAC*KIRLLSRGPTY Trigger: GTATGTGGGACCCCGGCTAAGCAGACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGGAGCTCGAAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CGATCACCAGCCCCATGGTCAGTTTCGAGCTCCTCCTaGTGTTGTCTGGCTTGCTGCAAAATCCGTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RSPAPWSVSSSS*CCLACCKIRLL Trigger: AAGCAGACGGATTTTGCAGCAAGCCAGACAACAGCAGGAGGAGCTCGAAACTGACCATGGGGCTGGTGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CAGGAAGATGCTGTTGGCACCGCTGTATTCCATTTCTaGGATCTTCAGCATGGCCGCACTGGAGTGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QEDAVGTAVFHF*DLQHGRTGVQH Trigger: GTGCTGCACTCCAGTGCGGCCATGCTGAAGATCGCAGAAATGGAATACAGCGGTGCCAACAGCATCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CAA 90 bp | GGCAATGCGTACTTCTTATCCAGCAGCAGGCGCAGGAAGATGCTGTaGGCACCGCTGTATTCCATTTCTGCGATCTTCAGCATGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: GNAYFLSSSRRRKML*APLYSISAIFSMAA Trigger: TGCGGCCATGCTGAAGATCGCAGAAATGGAATACAGCGGTGCCAACAGCATCTTCCTGCGCCTGCTGCTGGATAAGAAGTACGCATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | AGAGGCAAAAATCCTGGTGGCTTGATACATGGCGGCTaGAGTCCAGGCCTCAGGCTCAGTGACATAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RGKNPGGLIHGG*SPGLRLSDIED Trigger: ATCCTCTATGTCACTGAGCCTGAGGCCTGGACTGCAGCCGCCATGTATCAAGCCACCAGGATTTTTGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CAA 90 bp | AGGATCTGCTCCCAGTTGGACAGTGCAGGGATGACCTTAAAAGCCTaGGGCAGTTTCCCACTGCGGTACTTACATAACACCTCCCGGACT | + |
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Preference number: 6 (lower is better) Translates to: RICSQLDSAGMTLKA*GSFPLRYLHNTSRT Trigger: AGTCCGGGAGGTGTTATGTAAGTACCGCAGTGGGAAACTGCCCAAGGCTTTTAAGGTCATCCCTGCACTGTCCAACTGGGAGCAGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CTCAGTGACATAGAGGATCTGCTCCCAGTTGGACAGTaGAGGGATGACCTTAAAAGCCTTGGGCAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSDIEDLLPVGQ*RDDLKSLGQFP Trigger: GGGAAACTGCCCAAGGCTTTTAAGGTCATCCCTGCACTGTCCAACTGGGAGCAGATCCTCTATGTCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS GCA 72 bp | CCCGATACCTCTGACATGACAGTCTCCACCTCTGTCTaGTTCTCCGTCAACTTCTCCATGATGATATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PDTSDMTVSTSV*FSVNFSMMISA Trigger: GGCTGATATCATCATGGAGAAGTTGACGGAGAAGCAGACAGAGGTGGAGACTGTCATGTCAGAGGTATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CAA 72 bp | TACTTCTTATCCAGCAGCAGGCGCAGGAAGATGCTGTaGGCACCGCTGTATTCCATTTCTGCGATCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: YFLSSSRRRKML*APLYSISAIFS Trigger: GCTGAAGATCGCAGAAATGGAATACAGCGGTGCCAACAGCATCTTCCTGCGCCTGCTGCTGGATAAGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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| CDS CAA 72 bp | ATGATATCAGCCAGGGTGCGCCTCACGGGAGGATTCTaGTTCATGAACATTTCAATGGCACGCTCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MISARVRLTGGF*FMNISMARSSS Trigger: TGAAGATGAGCGTGCCATTGAAATGTTCATGAACAAGAATCCTCCCGTGAGGCGCACCCTGGCTGATATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024783.9 |
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