Pregenerated sensors for BVES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071317Ensembl transcript IDs: ENSMUST00000095715.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGCTAGTGTCTGTGGCCCTCCCTCACTTCCCTTCTGGAGGGACTaGAGCAAACCACCCAAAGGTCACAACAGAGTGTGGGACTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: TASVCGPPSLPFWRD*SKPPKGHNRVWDFS Trigger: GGAGAAGTCCCACACTCTGTTGTGACCTTTGGGTGGTTTGCTTCAGTCCCTCCAGAAGGGAAGTGAGGGAGGGCCACAGACACTAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 90 bp | TGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTaGCTGTTAAAGCATAACAGGGTGATGGGTGGGGACAGAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: WWPLTHIKPQTTDGT*LLKHNRVMGGDREL Trigger: GAGTTCTCTGTCCCCACCCATCACCCTGTTATGCTTTAACAGGCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 90 bp | CTTCCACACCTTACCGCAGGTCCAGGCTCCAGAGTCACTGATAAATaGCATGGGATGAGGTCATTCACGGCCCATTCAGATAAAGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LPHLTAGPGSRVTDK*HGMRSFTAHSDKGS Trigger: ACTGCCTTTATCTGAATGGGCCGTGAATGACCTCATCCCATGCCATTTATCAGTGACTCTGGAGCCTGGACCTGCGGTAAGGTGTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR TCA 90 bp | TCCAAATTCCAAGACAGAAAGTCTGGTTTAGCTGAGAGTTGGCACTaGGCTCAGAAATGCTTCCACACCTTACCGCAGGTCCAGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SKFQDRKSGLAESWH*AQKCFHTLPQVQAP Trigger: TGGAGCCTGGACCTGCGGTAAGGTGTGGAAGCATTTCTGAGCTCAGTGCCAACTCTCAGCTAAACCAGACTTTCTGTCTTGGAATTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 90 bp | GAAGCACCACACATGAAGACTGGTCACAGTGGAATCCGATATTCCTaGCTTCTCAGGGGGTGTTATTTGCAGAATGACTGTAAATTAGCC | + |
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Preference number: 1 (lower is better) Translates to: EAPHMKTGHSGIRYS*LLRGCYLQNDCKLA Trigger: GGCTAATTTACAGTCATTCTGCAAATAACACCCCCTGAGAAGGCAGGAATATCGGATTCCACTGTGACCAGTCTTCATGTGTGGTGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 90 bp | AAGTTGTCCGTAGGCCTAACTTGGAACTATTTTCCTGTTCTTTTCTaGTCCTTTGCAGTCAGGTCTATGTGGGAGGGCTATTCAATGGCT | + |
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Preference number: 1 (lower is better) Translates to: KLSVGLTWNYFPVLF*SFAVRSMWEGYSMA Trigger: AGCCATTGAATAGCCCTCCCACATAGACCTGACTGCAAAGGAGCAGAAAAGAACAGGAAAATAGTTCCAAGTTAGGCCTACGGACAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 90 bp | GCTCTGCCCCGTGGATTTGCTCTTGACCACAGTTCTGGAAACAGCTaGCCCTTAAATAAATATTCTGTTGTTTGGAGACAAAGTCTTACT | + |
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Preference number: 1 (lower is better) Translates to: ALPRGFALDHSSGNS*PLNKYSVVWRQSLT Trigger: AGTAAGACTTTGTCTCCAAACAACAGAATATTTATTTAAGGGCCAGCTGTTTCCAGAACTGTGGTCAAGAGCAAATCCACGGGGCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR TCA 90 bp | CCCTTAAATAAATATTCTGTTGTTTGGAGACAAAGTCTTACTAAGTaGCCCCAGGTGGACCTCAAACTCTTCATGCTCCTACCTCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: PLNKYSVVWRQSLTK*PQVDLKLFMLLPQP Trigger: AGGCTGAGGTAGGAGCATGAAGAGTTTGAGGTCCACCTGGGGTCACTTAGTAAGACTTTGTCTCCAAACAACAGAATATTTATTTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 90 bp | TGCTCATCTGTGGCAATGAATCTAAAGTTGTCCGTAGGCCTAACTTaGAACTATTTTCCTGTTCTTTTCTGCTCCTTTGCAGTCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: CSSVAMNLKLSVGLT*NYFPVLFCSFAVRS Trigger: AGACCTGACTGCAAAGGAGCAGAAAAGAACAGGAAAATAGTTCCAAGTTAGGCCTACGGACAACTTTAGATTCATTGCCACAGATGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 90 bp | TTCAATGGCTCAGAGCTCCTGTTCGCCAAGTCTCTTTGTCGTCCTTaGAGGTCTTTAAAAATAGTTTCATGTTTCTTACTCAGACTAAAT | + |
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Preference number: 1 (lower is better) Translates to: FNGSELLFAKSLCRP*RSLKIVSCFLLRLN Trigger: ATTTAGTCTGAGTAAGAAACATGAAACTATTTTTAAAGACCTCCAAGGACGACAAAGAGACTTGGCGAACAGGAGCTCTGAGCCATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 90 bp | TTGGAGGTCTTTAAAAATAGTTTCATGTTTCTTACTCAGACTAAATaGCTCTCTGAAGATCCCTCGCCACAAGATTCTGATCTTTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LEVFKNSFMFLTQTK*LSEDPSPQDSDLCY Trigger: ATAACAAAGATCAGAATCTTGTGGCGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTTAAAGACCTCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | CCAATCAGTGGCCTTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGGTCACAACAGAGTGTaGGACTTCTCCTGCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: PISGLSWVACAPLSAEANGHNRV*DFSCSL Trigger: GAGTGAGCAGGAGAAGTCCCACACTCTGTTGTGACC...ATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAAGGCCACTGATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCGCTAACACAAGGAGCTaGCTGACAGGACAGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCANTRS*LTGQVA Trigger: TGCTACCTGTCCTGTCAGCCAGCTCCTTGTGTTAGC...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCCTAAGTGACCCCAGGTaGACCTCAAACTCTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCLSDPR*TSNSSC Trigger: GCATGAAGAGTTTGAGGTCCACCTGGGGTCACTTAG...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAACCTAGTTGGTGCCACAGCCTGTaGTATTCACTCAGCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GWPVRHCQLKQMIWAKPSWCHSL*YSLSPS Trigger: AGATGGGCTGAGTGAATATCACAGGCTGTGGCACCA...ACTAGGTTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGCCACAGTGTCTGGCTCAGTACATCTGCTTCTGTGATCCCAGAAGCCGAGCTGAGAGTTGGCACTaGGCTCAGAAATGCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CKPQCLAQYICFCDPRSRAESWH*AQKCFH Trigger: GTGGAAGCATTTCTGAGCTCAGTGCCAACTCTCAGC...TCGGCTTCTGGGATCACAGAAGCAGATGTACTGAGCCAGACACTGTGGCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | GACCCCCTGGTCACTCCAACCTTAAAGCCAAGGCTAAGTCACCACTGCCTTCATGTACATCTGCTTCTGTaGTCCCAGAAGCCGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: DPLVTPTLKPRLSHHCLHVHLLL*SQKPTE Trigger: TTCAGTCGGCTTCTGGGATCACAGAAGCAGATGTAC...ATGAAGGCAGTGGTGACTTAGCCTTGGCTTTAAGGTTGGAGTGACCAGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCACTCCAACCTTAAAGCCAAGGCTAAGTCACCACTGCCTTCATTGTTTCAAGGAGAGTGGCCCCAGTaGGGGAATCACTTCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GHSNLKAKAKSPLPSLFQGEWPQ*GNHFWS Trigger: AGACCAGAAGTGATTCCCTCACTGGGGCCACTCTCC...TTGAAACAATGAAGGCAGTGGTGACTTAGCCTTGGCTTTAAGGTTGGAGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCCTGTTAAAGCAGTAAGCCACAGTGTCTaGCTCAGTACATCTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ASDPHQASDDRWYLPVKAVSHSV*LSTSAS Trigger: AGAAGCAGATGTACTGAGCCAGACACTGTGGCTTAC...TGCTTTAACAGGCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | GACCCCCTGGTCACTCCAACCTTAAAGCCAAGGCTAAGTCACCACTGCCTTCATATGTTCCAGTTGGTTTaGGCAGATGAAGCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: DPLVTPTLKPRLSHHCLHMFQLV*ADEANV Trigger: CACATTTGCTTCATCTGCTCAAACCAACTGGAACAT...ATGAAGGCAGTGGTGACTTAGCCTTGGCTTTAAGGTTGGAGTGACCAGGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAAAATCACTTCTGGTCTTaGGGTGGGAAACAAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LAGWPVRHCQLKQMIWAKNHFWS*GGKQEQ Trigger: CTGTTCTTGTTTCCCACCCCAAGACCAGAAGTGATT...TTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCAGTTCTGGAAACAGCTaGCCCTTAAATAAATATTCT | + |
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Preference number: 2 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCSSGNS*PLNKYS Trigger: AGAATATTTATTTAAGGGCCAGCTGTTTCCAGAACT...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGATCAGTGGCCTTAGCTaGGTGGCCTGTGCGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSISGLS*VACAPL Trigger: CAGTGGCGCACAGGCCACCCAGCTAAGGCCACTGAT...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGGTCTTAACTGTATCTGAAGATGGCTCCAAATTCCAAGACAGAAAGTCTGTGTGGGACTTCTCCTaGTCACTCATCAGGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SKVLTVSEDGSKFQDRKSVWDFS*SLIRAA Trigger: AGCTGCCCTGATGAGTGAGCAGGAGAAGTCCCACAC...AGACTTTCTGTCTTGGAATTTGGAGCCATCTTCAGATACAGTTAAGACCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CAA 90 bp | GGGAGGGCTATTCAATGGCTCAGAGCTCCTGTTCGCCAAGTCTCTTaGTCGTCCTTGGAGGTCTTTAAAAATAGTTTCATGTTTCTTACT | + |
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Preference number: 2 (lower is better) Translates to: GRAIQWLRAPVRQVS*SSLEVFKNSFMFLT Trigger: AGTAAGAAACATGAAACTATTTTTAAAGACCTCCAAGGACGACAAAGAGACTTGGCGAACAGGAGCTCTGAGCCATTGAATAGCCCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGCCCTTCTGGAGGGACTaGAGCAAACCACCCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSPFWRD*SKPPKG Trigger: ACCTTTGGGTGGTTTGCTTCAGTCCCTCCAGAAGGG...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGCTTCTGGTCTTGGGGTaGGAAACAAGAACAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: NTSTRSWQISRGKLFYYQLLVLG*ETRTDK Trigger: CTTGTCTGTTCTTGTTTCCCACCCCAAGACCAGAAG...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CAA 90 bp | TTGCTCATCTGTGGCAATGAATCTAAAGTTGTCCGTAGGCCTAACTaGGAACTATTTTCCTGTTCTTTTCTGCTCCTTTGCAGTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLICGNESKVVRRPN*ELFSCSFLLLCSQV Trigger: GACCTGACTGCAAAGGAGCAGAAAAGAACAGGAAAATAGTTCCAAGTTAGGCCTACGGACAACTTTAGATTCATTGCCACAGATGAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CCA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGACCACACATGAAGACTaGTCACAGTGGAATCCGATA | + |
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Preference number: 2 (lower is better) Translates to: NTSTRSWQISRGKLFYYQTTHED*SQWNPI Trigger: TATCGGATTCCACTGTGACCAGTCTTCATGTGTGGT...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR TCA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGGGTCTTAACTGTATCTaGAGATGGCTCCAAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: NTSTRSWQISRGKLFYYQGLNCI*RWLQIP Trigger: TGGAATTTGGAGCCATCTTCAGATACAGTTAAGACC...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CAA 90 bp | ATTCAATGGCTCAGAGCTCCTGTTCGCCAAGTCTCTTTGTCGTCCTaGGAGGTCTTTAAAAATAGTTTCATGTTTCTTACTCAGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: IQWLRAPVRQVSLSS*EVFKNSFMFLTQTK Trigger: TTTAGTCTGAGTAAGAAACATGAAACTATTTTTAAAGACCTCCAAGGACGACAAAGAGACTTGGCGAACAGGAGCTCTGAGCCATTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 72 bp | CCACCCAAAGGTCACAACAGAGTGTGGGACTTCTCCTaGTCACTCATCAGGGCAGCTCCATCGTGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: PPKGHNRVWDFS*SLIRAAPSWSP Trigger: TGGTGACCACGATGGAGCTGCCCTGATGAGTGAGCAGGAGAAGTCCCACACTCTGTTGTGACCTTTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CAA 90 bp | TACCAAGGCCCTCAGATCACCACTCCGGTTAGATGCCTCTGGCCTCAGGTAAAGCCCGTGGATTTGCTCTaGACCACAGTTCTGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: YQGPQITTPVRCLWPQVKPVDLL*TTVLET Trigger: TGTTTCCAGAACTGTGGTCAAGAGCAAATCCACGGG...CTTTACCTGAGGCCAGAGGCATCTAACCGGAGTGGTGATCTGAGGGCCTTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | CCTTTGCAGTCAGGTCTATGTGGGAGGGCTATTCAATaGCTCAGAGCTCCTGTTCGCCAAGTCTCTTTGTCG | + |
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Preference number: 3 (lower is better) Translates to: PLQSGLCGRAIQ*LRAPVRQVSLS Trigger: CGACAAAGAGACTTGGCGAACAGGAGCTCTGAGCCATTGAATAGCCCTCCCACATAGACCTGACTGCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR TCA 72 bp | GTCCAGGCTCCAGAGTCACTGATAAATGGCATGGGATaGGGTCATTCACGGCCCATTCAGATAAAGGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: VQAPESLINGMG*GHSRPIQIKAV Trigger: GACTGCCTTTATCTGAATGGGCCGTGAATGACCTCATCCCATGCCATTTATCAGTGACTCTGGAGCCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 72 bp | TACAGGTGTAAGCCACAGTGTCTGGCTCAGTACATCTaGTTCTGTGATCCCAGAAGCCGACTGAAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: YRCKPQCLAQYI*FCDPRSRLKGK Trigger: CTTTCCCTTCAGTCGGCTTCTGGGATCACAGAAGCAGATGTACTGAGCCAGACACTGTGGCTTACACCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | CCTGTTCTTTTCTGCTCCTTTGCAGTCAGGTCTATGTaGGAGGGCTATTCAATGGCTCAGAGCTCCTGTTCG | + |
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Preference number: 3 (lower is better) Translates to: PVLFCSFAVRSM*EGYSMAQSSCS Trigger: CGAACAGGAGCTCTGAGCCATTGAATAGCCCTCCCACATAGACCTGACTGCAAAGGAGCAGAAAAGAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR TCA 72 bp | CAAGACAGAAAGTCTGGTTTAGCTGAGAGTTGGCACTaGGCTCAGAAATGCTTCCACACCTTACCGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QDRKSGLAESWH*AQKCFHTLPQV Trigger: GACCTGCGGTAAGGTGTGGAAGCATTTCTGAGCTCAGTGCCAACTCTCAGCTAAACCAGACTTTCTGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | TTGTTTGGAGACAAAGTCTTACTAAGTGACCCCAGGTaGACCTCAAACTCTTCATGCTCCTACCTCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LFGDKVLLSDPR*TSNSSCSYLSL Trigger: GAGGCTGAGGTAGGAGCATGAAGAGTTTGAGGTCCACCTGGGGTCACTTAGTAAGACTTTGTCTCCAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | TTCTTAGCTATGGAACATGATGGGAGGCAGGAGGGGTaGCTTGTATGTTCCAGTTGGTTTGAGCAGATGAAG | + |
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Preference number: 3 (lower is better) Translates to: FLAMEHDGRQEG*LVCSSWFEQMK Trigger: CTTCATCTGCTCAAACCAACTGGAACATACAAGCCACCCCTCCTGCCTCCCATCATGTTCCATAGCTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR GCA 72 bp | CACATGAAGACTGGTCACAGTGGAATCCGATATTCCTaGCTTCTCAGGGGGTGTTATTTGCAGAATGACTGT | + |
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Preference number: 3 (lower is better) Translates to: HMKTGHSGIRYS*LLRGCYLQNDC Trigger: ACAGTCATTCTGCAAATAACACCCCCTGAGAAGGCAGGAATATCGGATTCCACTGTGACCAGTCTTCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | TGCTCAGTGTTTAGGGCATCAATCGGGGGCAGGAAGTaGAAACGCGTGGCTTTGAGTAAAATAAACCAACAA | + |
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Preference number: 3 (lower is better) Translates to: CSVFRASIGGRK*KRVALSKINQQ Trigger: TTGTTGGTTTATTTTACTCAAAGCCACGCGTTTCCACTTCCTGCCCCCGATTGATGCCCTAAACACTGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CAA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGGAATCACTTCTGGTCTaGGGGTGGGAAACAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: NTSTRSWQISRGKLFYYQESLLV*GWETRT Trigger: TGTTCTTGTTTCCCACCCCAAGACCAGAAGTGATTC...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | TCCATTCCCAGCACTACAAATACCTCAACTAGATCCTaGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAG | + |
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Preference number: 3 (lower is better) Translates to: SIPSTTNTSTRS*QISRGKLFYYQ Trigger: CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATTTGTAGTGCTGGGAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR TCA 72 bp | AAATATTCTGTTGTTTGGAGACAAAGTCTTACTAAGTaGCCCCAGGTGGACCTCAAACTCTTCATGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: KYSVVWRQSLTK*PQVDLKLFMLL Trigger: TAGGAGCATGAAGAGTTTGAGGTCCACCTGGGGTCACTTAGTAAGACTTTGTCTCCAAACAACAGAATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | CGTGGATTTGCTCTTGACCACAGTTCTGGAAACAGCTaGCCCTTAAATAAATATTCTGTTGTTTGGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: RGFALDHSSGNS*PLNKYSVVWRQ Trigger: TTGTCTCCAAACAACAGAATATTTATTTAAGGGCCAGCTGTTTCCAGAACTGTGGTCAAGAGCAAATCCACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR-3UTR CAA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGCTCAGGGGGTGTTATTaGCAGAATGACTGTAAATTA | + |
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Preference number: 3 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSLRGCY*QNDCKL Trigger: TAATTTACAGTCATTCTGCAAATAACACCCCCTGAG...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| 3UTR CCA 72 bp | TTTAAAAATAGTTTCATGTTTCTTACTCAGACTAAATaGCTCTCTGAAGATCCCTCGCCACAAGATTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FKNSFMFLTQTK*LSEDPSPQDSD Trigger: ATCAGAATCTTGTGGCGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| 3UTR TCA 72 bp | TTATGTCAGCCTCGATTTCAACTTACATCATTAAAATaGTCAGAAGAACAACTCGTTCTAAATTCCCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCQPRFQLTSLK*SEEQLVLNSHD Trigger: GTCATGGGAATTTAGAACGAGTTGTTCTTCTGATCATTTTAATGATGTAAGTTGAAATCGAGGCTGACATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAACCTAGTGCTGCGGGGAGGACATaGGGAGAGACGCCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWPVRHCQLKQMIWAKPSAAGRT*GETPCW Trigger: CCAGCACGGCGTCTCTCCCCATGTCCTCCCCGCAGC...ACTAGGTTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAACCTAGTGCAGAGGCTCGCTGCTaGGGGGAGGACATGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWPVRHCQLKQMIWAKPSAEARC*GEDMGR Trigger: TCTCCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGC...ACTAGGTTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAATTGGCAGAGGCTCGCTaGTGCGGGGAGGACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGWPVRHCQLKQMIWAKLAEAR*CGEDMG Trigger: CCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAA...TTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | CCAATCAGTGGCCTTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATTCCTCATCTCCAGCATaGAGATCTGTGTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PISGLSWVACAPLSAEANSSSPA*RSVCRG Trigger: GCCTCTGCACACAGATCTCCATGCTGGAGATGAGGA...ATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAAGGCCACTGATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCTACCCCTTCCTCGATTaGCTTCATCTTGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCYPFLD*LHLGRG Trigger: GCCTCTGCCAAGATGAAGCCAATCGAGGAAGGGGTA...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGTAAGCCACAGTGTCTGGCTCAGTACATCTGCTTCTGTGATCCCAGACACAGCGGTAGAGAGTaGCCCAGACCACATAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRCKPQCLAQYICFCDPRHSGRE*PRPHKG Trigger: CCCTTTATGTGGTCTGGGCCACTCTCTACCGCTGTG...TCTGGGATCACAGAAGCAGATGTACTGAGCCAGACACTGTGGCTTACACCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | CCAATCAGTGGCCTTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATATACAGAAAAGGCTCTaGCTCCAGAAAGTAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PISGLSWVACAPLSAEANIQKRL*LQKVSQ Trigger: CTGACTTACTTTCTGGAGTCAGAGCCTTTTCTGTAT...ATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAAGGCCACTGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | TTAGCTGGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAAAGGTTTTGTCCTCTGTaGCGTAAACCTGGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGWPVRHCQLKQMIWAKRFCPL*RKPGPF Trigger: AAAGGGGCCAGGTTTACGCCACAGAGGACAAAACCT...TTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCCAGCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | GGTCACTCCAACCTTAAAGCCAAGGCTAAGTCACCACTGCCTTCATTGTTTCAACGATTGGCTTCATCTTaGCAGAGGCTCGCTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHSNLKAKAKSPLPSLFQRLASS*QRLAAA Trigger: CGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCG...TTGAAACAATGAAGGCAGTGGTGACTTAGCCTTGGCTTTAAGGTTGGAGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCCTGTGCGCCACTGTCAGCTGAAGCAAATGATTTGGGCAAAACCTAGTAGTAGGGTCATTCAGTaGGTACAGCTTATTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWPVRHCQLKQMIWAKPSSRVIQ*VQLICN Trigger: ATTACAAATAAGCTGTACTCACTGAATGACCCTACT...ACTAGGTTTTGCCCAAATCATTTGCTTCAGCTGACAGTGGCGCACAGGCCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | TACAGGTGTAAGCCACAGTGTCTGGCTCAGTACATCTGCTTCTGTGATCCCAGAAAAGATGCAAAATATTaGTACCCAAGAACACCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRCKPQCLAQYICFCDPRKDAKY*YPRTPS Trigger: ACTCGGTGTTCTTGGGTATCAATATTTTGCATCTTT...TCTGGGATCACAGAAGCAGATGTACTGAGCCAGACACTGTGGCTTACACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGCGTCGCTGGAGCTGGTaGTACTGTTCCTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSRRWSW*YCSSSP Trigger: TGGAGATGAGGAACAGTATCACCAGCTCCAGCGACG...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGCTGATGGACTTTGAGTaGGTCTGGAGACACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTSTRSWQISRGKLFYYQLMDFE*VWRHKD Trigger: GTCTTTGTGTCTCCAGACGCACTCAAAGTCCATCAG...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | AATACCTCAACTAGATCCTGGCAGATCAGCAGAGGTAAGCTTTTCTACTATCAGTTTGTGCATCTGCGTTaGTCTGAATTCGGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NTSTRSWQISRGKLFYYQFVHLR*SEFGRI Trigger: GATTCTCCCGAATTCAGATCAACGCAGATGCACAAA...CTGATAGTAGAAAAGCTTACCTCTGCTGATCTGCCAGGATCTAGTTGAGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACGTGCAGAGGCTCATCTaGGGCTCCAGCTTCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLALCVSELSSFMEIETHVQRLI*GSSFLT Trigger: AGTTAAGAAGCTGGAGCCCCAGATGAGCCTCTGCAC...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| 3UTR CAA 72 bp | GGAATCCGATATTCCTGCCTTCTCAGGGGGTGTTATTaGCAGAATGACTGTAAATTAGCCTTATGTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRYSCLLRGCY*QNDCKLALCVS Trigger: ACTCACACATAAGGCTAATTTACAGTCATTCTGCAAATAACACCCCCTGAGAAGGCAGGAATATCGGATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| 3UTR CAA 72 bp | ATTCAATGGCTCAGAGCTCCTGTTCGCCAAGTCTCTTaGTCGTCCTTGGAGGTCTTTAAAAATAGTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IQWLRAPVRQVS*SSLEVFKNSFM Trigger: CATGAAACTATTTTTAAAGACCTCCAAGGACGACAAAGAGACTTGGCGAACAGGAGCTCTGAGCCATTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| 3UTR CAA 72 bp | CTCAGAGCTCCTGTTCGCCAAGTCTCTTTGTCGTCCTaGGAGGTCTTTAAAAATAGTTTCATGTTTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LRAPVRQVSLSS*EVFKNSFMFLT Trigger: AGTAAGAAACATGAAACTATTTTTAAAGACCTCCAAGGACGACAAAGAGACTTGGCGAACAGGAGCTCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR TCA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACAAGACGATCATCAACTaGGGTTTTGTCCTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLALCVSELSSFMEIETHKTIIN*GFVLCG Trigger: GCCACAGAGGACAAAACCTCAGTTGATGATCGTCTT...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGTCGCCTTTGTGCATCTaGGTTGATCTGAATTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSSPLCI*VDLNSG Trigger: TCCCGAATTCAGATCAACGCAGATGCACAAAGGCGA...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACGGAGGTGAAGAGTGGTaGGAATTAGCAAACCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KLALCVSELSSFMEIETHGGEEW*ELANQL Trigger: CAGTTGGTTTGCTAATTCCCACCACTCTTCACCTCC...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACCCTGCAGTTATCATCTaGAACAATGGTGACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLALCVSELSSFMEIETHPAVII*NNGDLE Trigger: TTCCAGGTCACCATTGTTGCAGATGATAACTGCAGG...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGTCTTAACTGTATCTGAAGATGGCTCCAAATTCCAAGACAGAAAGTCTACCAGCATAAGAACCTaGAGTTATCATCTGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKVLTVSEDGSKFQDRKSTSIRT*SYHLQQ Trigger: TTGTTGCAGATGATAACTGCAGGTTCTTATGCTGGT...AGACTTTCTGTCTTGGAATTTGGAGCCATCTTCAGATACAGTTAAGACCTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CCA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACTATGGAGGTGAAGAGTaGTGGGAATTAGCAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLALCVSELSSFMEIETHYGGEE*WELANQ Trigger: TTGGTTTGCTAATTCCCACCACTCTTCACCTCCATA...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| 3UTR CAA 72 bp | AAATACACTTGCTCATCTGTGGCAATGAATCTAAAGTaGTCCGTAGGCCTAACTTGGAACTATTTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KYTCSSVAMNLK*SVGLTWNYFPV Trigger: AACAGGAAAATAGTTCCAAGTTAGGCCTACGGACAACTTTAGATTCATTGCCACAGATGAGCAAGTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGTTTCATGTTTCTTACTCAGACTAAATGGCTCTCTGAAGATCCCTCGTGCAAAGCAAACGTTTaGTACATGAAAAACCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KNSFMFLTQTKWLSEDPSCKANV*YMKNQM Trigger: CATCTGGTTTTTCATGTAGCAAACGTTTGCTTTGCA...CGAGGGATCTTCAGAGAGCCATTTAGTCTGAGTAAGAAACATGAAACTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 90 bp | CGATTGGCTTCATCTTGGCAGAGGCTCGCTGCTGCGGGGAGGACATaGGGAGAGACGCCGTGCTGGAGGAGCCCCGCAGAAAGTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLASSWQRLAAAGRT*GETPCWRSPAESGA Trigger: TGCACCACTTTCTGCGGGGCTCCTCCAGCACGGCGTCTCTCCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS TCA 90 bp | CCCGCAGAAAGTGGTGCAGGCCGTCCTCGCCGTCGCTGGAGCTGGTaGTACTGTTCCTCATCTCCAGCATGGAGATCTGTGTGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAESGAGRPRRRWSW*YCSSSPAWRSVCRG Trigger: GCCTCTGCACACAGATCTCCATGCTGGAGATGAGGAACAGTATCACCAGCTCCAGCGACGGCGAGGACGGCCTGCACCACTTTCTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCTCGATTGGCTTCATCTaGGCAGAGGCTCGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCSIGFI*AEARCC Trigger: GCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGA...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 90 bp | TGGAGACACAAAGACCTCATCGTCATCTTCTACCCCTTCCTCGATTaGCTTCATCTTGGCAGAGGCTCGCTGCTGCGGGGAGGACATGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRHKDLIVIFYPFLD*LHLGRGSLLRGGHG Trigger: CCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAGGAAGGGGTAGAAGATGACGATGAGGTCTTTGTGTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | TACCAAGGCCCTCAGATCACCACTCCGGTTAGATGCCTCTGGCCTCAGGTAAAGTGGAATTTTTCGCCTTaGTGCATCTGCGTTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YQGPQITTPVRCLWPQVKWNFSP*CICVDL Trigger: CAGATCAACGCAGATGCACAAAGGCGAAAAATTCCA...CTTTACCTGAGGCCAGAGGCATCTAACCGGAGTGGTGATCTGAGGGCCTTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | CTAAGGTGGTGGCCTCTGACCCACATCAAGCCTCAGACGACAGATGGTACCTGCCTGCAAAGCAAACGTTaGCTACATGAAAAACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRWWPLTHIKPQTTDGTCLQSKR*LHEKPD Trigger: ATCTGGTTTTTCATGTAGCAAACGTTTGCTTTGCAG...GCAGGTACCATCTGTCGTCTGAGGCTTGATGTGGGTCAGAGGCCACCACCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | TGTAAGCCACAGTGTCTGGCTCAGTACATCTGCTTCTGTGATCCCAGAAGCCGAAAGTCAGTCTTTCTCTaGACCAGCATAAGAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CKPQCLAQYICFCDPRSRKSVFL*TSIRTC Trigger: GCAGGTTCTTATGCTGGTCAAGAGAAAGACTGACTT...TCGGCTTCTGGGATCACAGAAGCAGATGTACTGAGCCAGACACTGTGGCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 90 bp | CTGTTCCTCATCTCCAGCATGGAGATCTGTGTGCAGAGGCTCATCTaGGGCTCCAGCTTCTTAACTTTCTTATCATTTAAAGTAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLISSMEICVQRLI*GSSFLTFLSFKVGS Trigger: TGACCCTACTTTAAATGATAAGAAAGTTAAGAAGCTGGAGCCCCAGATGAGCCTCTGCACACAGATCTCCATGCTGGAGATGAGGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS TCA 90 bp | TGCAACAATGGTGACCTGGAATTTTTCGCCTTTGTGCATCTGCGTTaGTCTGAATTCGGGAGAATCTATAAAGGCACACGGGTAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CNNGDLEFFAFVHLR*SEFGRIYKGTRVNV Trigger: AACATTTACCCGTGTGCCTTTATAGATTCTCCCGAATTCAGATCAACGCAGATGCACAAAGGCGAAAAATTCCAGGTCACCATTGTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGTCTTAACTGTATCTGAAGATGGCTCCAAATTCCAAGACAGAAAGTCTGAAAGATGCAAAATATaGATACCCAAGAACACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKVLTVSEDGSKFQDRKSERCKI*IPKNTE Trigger: CTCGGTGTTCTTGGGTATCAATATTTTGCATCTTTC...AGACTTTCTGTCTTGGAATTTGGAGCCATCTTCAGATACAGTTAAGACCTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS-3UTR CAA 90 bp | AAATTAGCCTTATGTGTGAGTGAGCTAAGTAGTTTCATGGAAATTGAGACTCACAGCTCCTTTTCAATTTaGACCGGTCTTTTCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KLALCVSELSSFMEIETHSSFSI*TGLFLY Trigger: GTACAAGAAAAGACCGGTCAAAATTGAAAAGGAGCT...GTGAGTCTCAATTTCCATGAAACTACTTAGCTCACTCACACATAAGGCTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS GCA 72 bp | AGAGACGCCGTGCTGGAGGAGCCCCGCAGAAAGTGGTaGAGGCCGTCCTCGCCGTCGCTGGAGCTGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: RDAVLEEPRRKW*RPSSPSLELVI Trigger: TATCACCAGCTCCAGCGACGGCGAGGACGGCCTGCACCACTTTCTGCGGGGCTCCTCCAGCACGGCGTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 72 bp | TCATCTTGGCAGAGGCTCGCTGCTGCGGGGAGGACATaGGGAGAGACGCCGTGCTGGAGGAGCCCCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSWQRLAAAGRT*GETPCWRSPAE Trigger: TTCTGCGGGGCTCCTCCAGCACGGCGTCTCTCCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS GCA 72 bp | CCTTCCTCGATTGGCTTCATCTTGGCAGAGGCTCGCTaGTGCGGGGAGGACATGGGGAGAGACGCCGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSIGFILAEAR*CGEDMGRDAVL Trigger: CAGCACGGCGTCTCTCCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS TCA 72 bp | AGTGGTGCAGGCCGTCCTCGCCGTCGCTGGAGCTGGTaGTACTGTTCCTCATCTCCAGCATGGAGATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGAGRPRRRWSW*YCSSSPAWRSV Trigger: CACAGATCTCCATGCTGGAGATGAGGAACAGTATCACCAGCTCCAGCGACGGCGAGGACGGCCTGCACCACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CAA 72 bp | TCGTCATCTTCTACCCCTTCCTCGATTGGCTTCATCTaGGCAGAGGCTCGCTGCTGCGGGGAGGACATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSTPSSIGFI*AEARCCGEDMG Trigger: CCCCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAGGAAGGGGTAGAAGATGACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CAA 90 bp | CTGGAGACACAAAGACCTCATCGTCATCTTCTACCCCTTCCTCGATaGGCTTCATCTTGGCAGAGGCTCGCTGCTGCGGGGAGGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: LETQRPHRHLLPLPR*ASSWQRLAAAGRTW Trigger: CCATGTCCTCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAGGAAGGGGTAGAAGATGACGATGAGGTCTTTGTGTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 72 bp | AAAGACCTCATCGTCATCTTCTACCCCTTCCTCGATTaGCTTCATCTTGGCAGAGGCTCGCTGCTGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KDLIVIFYPFLD*LHLGRGSLLRG Trigger: TCCCCGCAGCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAGGAAGGGGTAGAAGATGACGATGAGGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS CCA 72 bp | TCCAGATCATCACATCCAAGGCACAGCGGTAGAGAGTaGCCCAGACCACATAAAGGGTACATCCTAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSHPRHSGRE*PRPHKGYILET Trigger: TGTCTCTAGGATGTACCCTTTATGTGGTCTGGGCCACTCTCTACCGCTGTGCCTTGGATGTGATGATCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
||
| CDS TCA 72 bp | GGTGACCTGGAATTTTTCGCCTTTGTGCATCTGCGTTaGTCTGAATTCGGGAGAATCTATAAAGGCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: GDLEFFAFVHLR*SEFGRIYKGTR Trigger: CCGTGTGCCTTTATAGATTCTCCCGAATTCAGATCAACGCAGATGCACAAAGGCGAAAAATTCCAGGTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS CAA 90 bp | GGTGAAGAGTGGTGGGAATTAGCAAACCAACTGCAAAGCAAACGTTaGCTACATGAAAAACCAGATGGTGAATCTCTCGCCAGTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GEEWWELANQLQSKR*LHEKPDGESLASSH Trigger: GTGAGAACTGGCGAGAGATTCACCATCTGGTTTTTCATGTAGCAAACGTTTGCTTTGCAGTTGGTTTGCTAATTCCCACCACTCTTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS CCA 72 bp | ATCTCCAGCATGGAGATCTGTGTGCAGAGGCTCATCTaGGGCTCCAGCTTCTTAACTTTCTTATCATTTAAA | + |
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Preference number: 6 (lower is better) Translates to: ISSMEICVQRLI*GSSFLTFLSFK Trigger: TTTAAATGATAAGAAAGTTAAGAAGCTGGAGCCCCAGATGAGCCTCTGCACACAGATCTCCATGCTGGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS CAA 72 bp | TGGTGGGAATTAGCAAACCAACTGCAAAGCAAACGTTaGCTACATGAAAAACCAGATGGTGAATCTCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: WWELANQLQSKR*LHEKPDGESLA Trigger: GGCGAGAGATTCACCATCTGGTTTTTCATGTAGCAAACGTTTGCTTTGCAGTTGGTTTGCTAATTCCCACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS CAA 72 bp | TCATCTGCAACAATGGTGACCTGGAATTTTTCGCCTTaGTGCATCTGCGTTGATCTGAATTCGGGAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: SSATMVTWNFSP*CICVDLNSGES Trigger: AGATTCTCCCGAATTCAGATCAACGCAGATGCACAAAGGCGAAAAATTCCAGGTCACCATTGTTGCAGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS GCA 72 bp | ACAATGGTGACCTGGAATTTTTCGCCTTTGTGCATCTaGGTTGATCTGAATTCGGGAGAATCTATAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TMVTWNFSPLCI*VDLNSGESIKA Trigger: TGCCTTTATAGATTCTCCCGAATTCAGATCAACGCAGATGCACAAAGGCGAAAAATTCCAGGTCACCATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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| CDS GCA 72 bp | TCTGCAACAATGGTGACCTGGAATTTTTCGCCTTTGTaGATCTGCGTTGATCTGAATTCGGGAGAATCTATA | + |
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Preference number: 6 (lower is better) Translates to: SATMVTWNFSPL*ICVDLNSGESI Trigger: TATAGATTCTCCCGAATTCAGATCAACGCAGATGCACAAAGGCGAAAAATTCCAGGTCACCATTGTTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095715.5 |
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