Pregenerated sensors for BUD31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038722Ensembl transcript IDs: ENSMUST00000159018.8, ENSMUST00000160075.2, ENSMUST00000162308.8, ENSMUST00000162594.8
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCCCAGCCATCTGGAGGTaGTTTCCGGCTTCTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LGLFSEHHSEKSCFRQWPPAIWR*FPASFD Trigger: GTCAAAAGAAGCCGGAAAGCACCTCCAGATGGCTGG...GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCACAACTCCCAGCCATCTaGAGGTGCTTTCCGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: WVFSLSTTLRRVASGSGPQLPAI*RCFPAS Trigger: AGAAGCCGGAAAGCACCTCCAGATGGCTGGGAGTTG...TGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATTTGGTGTCCCGAGTCTaGATGCAGCGTAGGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLFSEHHSEKSCFRQWPNLVSRV*MQRRQH Trigger: ATGCTGCCTACGCTGCATTCAGACTCGGGACACCAA...ATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR GCA 90 bp | TGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCACCAGCCATCTGGAGGTaGTTTCCGGCTTCTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: WVFSLSTTLRRVASGSGPPAIWR*FPASFD Trigger: GTCAAAAGAAGCCGGAAAGCACCTCCAGATGGCTGG...TGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CCA 90 bp | GGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATCAACTCCCAGCCATCTaGAGGTGCTTTCCGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLFSEHHSEKSCFRQWPNQLPAI*RCFPAS Trigger: AGAAGCCGGAAAGCACCTCCAGATGGCTGGGAGTTG...ATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCCTTCCAGCTTGCTTTTaGGAACCCGGCAAATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LGLFSEHHSEKSCFRQWPLPACF*EPGKCS Trigger: ACTGCATTTGCCGGGTTCCCAAAAGCAAGCTGGAAG...GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR TCA 90 bp | GTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATATTGGTGTCCCGAGTCTaGATGCAGCGTAGGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VFSLSTTLRRVASGSGPILVSRV*MQRRQH Trigger: ATGCTGCCTACGCTGCATTCAGACTCGGGACACCAA...TATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATACCAGCCATCTGGAGGTaGTTTCCGGCTTCTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: VFSLSTTLRRVASGSGPIPAIWR*FPASFD Trigger: GTCAAAAGAAGCCGGAAAGCACCTCCAGATGGCTGG...TATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATAGACCCACTTCCAGCTTaGTTTTGGGAACCCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VFSLSTTLRRVASGSGPIDPLPA*FWEPGK Trigger: TTTGCCGGGTTCCCAAAAGCAAGCTGGAAGTGGGTC...TATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CCA 90 bp | GGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATTTCCTCTTTCCCTCATaGGGTTCAGTTTCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLFSEHHSEKSCFRQWPNFLFPS*GSVSAS Trigger: AGAAGCTGAAACTGAACCCCATGAGGGAAAGAGGAA...ATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162594.8 |
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| CDS-3UTR CCA 90 bp | GTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATATTCCTCTTTCCCTCATaGGGTTCAGTTTCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VFSLSTTLRRVASGSGPIFLFPS*GSVSAS Trigger: AGAAGCTGAAACTGAACCCCATGAGGGAAAGAGGAA...TATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162594.8 |
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| CDS-3UTR TCA 90 bp | AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACATTGGTGTCCCGAGTCTaGATGCAGCGTAGGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RFYFYRSQLVNTKVVTCTLVSRV*MQRRQH Trigger: ATGCTGCCTACGCTGCATTCAGACTCGGGACACCAA...TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR GCA 90 bp | AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACAGACCCACTTCCAGCTTaGTTTTGGGAACCCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RFYFYRSQLVNTKVVTCTDPLPA*FWEPGK Trigger: TTTGCCGGGTTCCCAAAAGCAAGCTGGAAGTGGGTC...TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCACGACCCACTTCCAGCTaGCTTTTGGGAACCCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: WVFSLSTTLRRVASGSGPRPTSS*LLGTRQ Trigger: TTGCCGGGTTCCCAAAAGCAAGCTGGAAGTGGGTCG...TGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCACTTCCAGCTTGCTTTaGGGAACCCGGCAAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LGLFSEHHSEKSCFRQWPTSSLL*GTRQMQ Trigger: CTGCATTTGCCGGGTTCCCAAAAGCAAGCTGGAAGT...GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAACTTCCAGCTTGCTTTaGGGAACCCGGCAAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: WVFSLSTTLRRVASGSGPTSSLL*GTRQMQ Trigger: CTGCATTTGCCGGGTTCCCAAAAGCAAGCTGGAAGT...TGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | GTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATACGACCCACTTCCAGCTaGCTTTTGGGAACCCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: VFSLSTTLRRVASGSGPIRPTSS*LLGTRQ Trigger: TTGCCGGGTTCCCAAAAGCAAGCTGGAAGTGGGTCG...TATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCCTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LGLFSEHHSEKSCFRQWPLVHPT*VQSTPS Trigger: GCTGGGAGTTGATTGAACCAACGTTGGATGAACTAG...GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCACTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WVFSLSTTLRRVASGSGPLVHPT*VQSTPS Trigger: GCTGGGAGTTGATTGAACCAACGTTGGATGAACTAG...TGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | GGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATCTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLFSEHHSEKSCFRQWPNLVHPT*VQSTPS Trigger: GCTGGGAGTTGATTGAACCAACGTTGGATGAACTAG...ATTGGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACACGACCCACTTCCAGCTaGCTTTTGGGAACCCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RFYFYRSQLVNTKVVTCTRPTSS*LLGTRQ Trigger: TTGCCGGGTTCCCAAAAGCAAGCTGGAAGTGGGTCG...TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162308.8 ENSMUST00000162594.8 |
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| CDS CAA 72 bp | CAGCTTCTCTCATCTTTTGATCTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGCCATCTGGAGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLLSSFDLVHPT*VQSTPSHLEVL Trigger: AAGCACCTCCAGATGGCTGGGAGTTGATTGAACCAACGTTGGATGAACTAGATCAAAAGATGAGAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159018.8 ENSMUST00000160075.2 ENSMUST00000162594.8 |
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| CDS CAA 90 bp | ATTCATAGAGTTCTTCTCTCATCTTTTGATCTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGCCATCTGGAGGTGCTTTCCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IHRVLLSSFDLVHPT*VQSTPSHLEVLSGF Trigger: GAAGCCGGAAAGCACCTCCAGATGGCTGGGAGTTGATTGAACCAACGTTGGATGAACTAGATCAAAAGATGAGAGAAGAACTCTATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162308.8 |
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| CDS CAA 72 bp | GTTCTTCTCTCATCTTTTGATCTAGTTCATCCAACGTaGGTTCAATCAACTCCCAGCCATCTGGAGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLLSSFDLVHPT*VQSTPSHLEVL Trigger: AAGCACCTCCAGATGGCTGGGAGTTGATTGAACCAACGTTGGATGAACTAGATCAAAAGATGAGAGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162308.8 |
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