Pregenerated sensors for BUD23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005378Ensembl transcript IDs: ENSMUST00000071677.10, ENSMUST00000085984.11, ENSMUST00000111205.8, ENSMUST00000129691.8, ENSMUST00000148549.2, ENSMUST00000202478.4
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGGTCCCGGGCTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTaGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GRSRAGQLPLSEQSG*PGRLQDWLQVWVAR Trigger: CCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAGCCCGGGACCTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CCA 90 bp | ATACAGCGCACTCAGAAGCGGGGCTTGCGCTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCCTTGCCCTGGCGCCTGCGCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: IQRTQKRGLRFRPVY*VSGLTSLPWRLRLS Trigger: GGAGAGGCGCAGGCGCCAGGGCAAGGAGGTCAGACCTGACACCCAGTACACCGGCCGAAAGCGCAAGCCCCGCTTCTGAGTGCGCTGTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 90 bp | CTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTaGAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: LGSSHSLNRVGGQDG*RTGCRCGWPGSISN Trigger: ATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR GCA 90 bp | GTGTGGGGCCCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAGCCCCTTTGGCAGGGAGGTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VWGPLTGEHGLGGLV*ILTFSQPLWQGGGR Trigger: CCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGGGCCCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR TCA 90 bp | GCCCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTTGGCAGGGAGGTGGAAGGCCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ARSLVNMDSEAWSAS*LSVSPFGREVEGPE Trigger: TTCTGGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 90 bp | TTTGGCACTGTTGGGGAAGTCTACCACCACGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGTGATCAGCTCCAGCTGCTCCGAGTT | + |
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Preference number: 1 (lower is better) Translates to: FGTVGEVYHHAASEA*PRGLGCDQLQLLRV Trigger: AACTCGGAGCAGCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGCGTGGTGGTAGACTTCCCCAACAGTGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR TCA 90 bp | TCACCAGGTCCCTCCGTGCCTTCTTGTGTGGGGCCCGCTCACTGGTaGACATGGACTCGGAGGCCTGGTCTGCATCCTGACTTTCAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: SPGPSVPSCVGPAHW*TWTRRPGLHPDFQS Trigger: TGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 90 bp | TGGGTTGTGATCAGCTCCAGCTGCTCCGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCACGGACAAGGGCAGAGTACAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: WVVISSSCSEFSGYS*RTARAPRTRAEYKE Trigger: TTCCTTGTACTCTGCCCTTGTCCGTGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCGGAGCAGCTGGAGCTGATCACAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR TCA 90 bp | TGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTaGTTAGATACAGCGCACTCAGAAGCGGGGCTTGCGCTTTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: CRTGCRCGWPGSISN*LDTAHSEAGLALSA Trigger: GGCCGAAAGCGCAAGCCCCGCTTCTGAGTGCGCTGTATCTAATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR CCA 90 bp | CTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTaGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTAGA | + |
|
Preference number: 1 (lower is better) Translates to: LPLSEQSGWPGRLQD*LQVWVARLYLQLIR Trigger: TCTAATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCGGACGGCTGCAGGACTaGCTGCAGGTGTGGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIGRLQD*LQVWVA Trigger: GGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCC...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 ENSMUST00000202478.4 |
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| 3UTR-3UTR GCA 90 bp | TACAGCTGCAGGACAGCTCGGGCCCCACGGACAAGGGCAGAGTACAAGGAAGAAGGCTGCAGGACTGGCTaGAGGTGTGGGTGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: YSCRTARAPRTRAEYKEEGCRTG*RCGWPG Trigger: GCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCC...TTCTTCCTTGTACTCTGCCCTTGTCCGTGGGGCCCGAGCTGTCCTGCAGCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCCCTGGCGCCTGCGCCTCTCCTTCTTCTCTAGGACCCATTCCCGGCTCTTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PCPGACASPSSLGPIPGSFSGYS*RTARAP Trigger: TGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...AGAGCCGGGAATGGGTCCTAGAGAAGAAGGAGAGGCGCAGGCGCCAGGGCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR CCA 90 bp | CGGGGCTTGCGCTTTCGGCCGGTGTACTGGGTGTCAGGTCTGACCTCCTTGCCCCCTTTGGCAGGGAGGTaGAAGGCCCAGAAAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: RGLRFRPVYWVSGLTSLPPLAGR*KAQKTD Trigger: GTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGG...GGGCAAGGAGGTCAGACCTGACACCCAGTACACCGGCCGAAAGCGCAAGCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR TCA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATGCAGCTCCCACTCTCTaGACAGAGTGGGTGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TAAGLAAGVGGQALSPIDAAPTL*TEWVAR Trigger: CCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGC...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCTGCGCCTCTCCTTCTTCTCTAGGACCCATTCCCGGCTCTTCTTCACCAGGGACTGGCTGCAGGTGTaGGTGGCCAGGCTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: RLRLSFFSRTHSRLFFTRDWLQV*VARLYL Trigger: GAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTC...CCTGGTGAAGAAGAGCCGGGAATGGGTCCTAGAGAAGAAGGAGAGGCGCAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCCTGTGTTGCCCAGACTaGCCTGGAACTTTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: GGQDGCRTGCRCGWPGSILCCPD*PGTFHL Trigger: AAGATGGAAAGTTCCAGGCCAGTCTGGGCAACACAG...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGCTGCAGGACTGGCTaGAGGTGTGGGTGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLPRLAWNFPSSCLRLPGGCRTG*RCGWPG Trigger: GCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCC...TCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTGGCTGCAGGACTGGCTaGAGGTGTGGGTGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EGVGITGSELPNPDPWNSGCRTG*RCGWPG Trigger: GCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCC...AGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTTGCCCAGACTGGCCTaGAACTTTCCATCTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GGQDGCRTGCRCGWPGSILPRLA*NFPSSC Trigger: ACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAA...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CAA 90 bp | CTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATaGATTAGATACAGCGCACTCAGAAGCGGGGCTTGCGCTTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LQDWLQVWVARLYLQ*IRYSALRSGACAFG Trigger: GCCGAAAGCGCAAGCCCCGCTTCTGAGTGCGCTGTATCTAATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR GCA 90 bp | CGCCTGCGCCTCTCCTTCTTCTCTAGGACCCATTCCCGGCTCTTCTTCACCAGGGCGTTGCAGAGCCACTaGACAGCAGAGATGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: RLRLSFFSRTHSRLFFTRALQSH*TAEMLM Trigger: CATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGC...CCTGGTGAAGAAGAGCCGGGAATGGGTCCTAGAGAAGAAGGAGAGGCGCAGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR CAA 90 bp | GAAAAGAAGCAGTACAGGCGCCTGGCAGGGACGTCCGACTTCTTGTaGGCGTTGCAGAGCCACTGCACAGCAGAGATGCTGATGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: EKKQYRRLAGTSDFL*ALQSHCTAEMLMQP Trigger: TGGCTGCATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCTTCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGGACGGCTGCAGGACTaGCTGCAGGTGTGGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LELSIFLSQTPRRVLGLQGRLQD*LQVWVA Trigger: GGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCC...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CAA 90 bp | GAAGAAAAGAAGCAGTACAGGCGCCTGGCAGGGACGTCCGACTTCTaGTTGGCGTTGCAGAGCCACTGCACAGCAGAGATGCTGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: EEKKQYRRLAGTSDF*LALQSHCTAEMLMQ Trigger: CTGCATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCTTCTTTTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGGTGGCCAGGACGGCTaGAGGACTGGCTGCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LELSIFLSQTPRRVLGLQGGQDG*RTGCRC Trigger: ACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGGACTGGCTGCAGGTGTaGGTGGCCAGGCTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: CVAQTGLELSIFLSQTPRDWLQV*VARLYL Trigger: GAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTC...CCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGGCAGCTCCCACTCTCTaGACAGAGTGGGTGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WNFPSSCLRLPGGCWDYRAAPTL*TEWVAR Trigger: CCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGC...CCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTGACTGGCTGCAGGTGTaGGTGGCCAGGCTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: GVGITGSELPNPDPWNSFDWLQV*VARLYL Trigger: GAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTC...AAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CAA 90 bp | GGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTaGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: GLELSIFLSQTPRRV*GLQDLSCQTQIPGT Trigger: AGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CAA 90 bp | GGTTTTTGCTGTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTaGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GFCCVAQTGLELSIF*SQTPRRVLGLQDLS Trigger: GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACACAGCAAAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTAGTGAAAAAGGTGGCCAGGACGGCTaGAGGACTGGCTGCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ITGSELPNPDPWNSFSEKGGQDG*RTGCRC Trigger: ACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC...TTTTTCACTAAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCCCAAACCCAGATCCCTaGAACTCTTTTAGTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SIFLSQTPRRVLGLQDLSPNPDP*NSFSEK Trigger: TTTTTCACTAAAAGAGTTCCAGGGATCTGGGTTTGG...GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CCA 72 bp | CGGGCTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTaGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: RAGQLPLSEQSG*PGRLQDWLQVW Trigger: CCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR CCA 72 bp | ACTCAGAAGCGGGGCTTGCGCTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCCTTGCCCTGGCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TQKRGLRFRPVY*VSGLTSLPWRL Trigger: CAGGCGCCAGGGCAAGGAGGTCAGACCTGACACCCAGTACACCGGCCGAAAGCGCAAGCCCCGCTTCTGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR TCA 72 bp | CCCTCCGTGCCTTCTTGTGTGGGGCCCGCTCACTGGTaGACATGGACTCGGAGGCCTGGTCTGCATCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: PSVPSCVGPAHW*TWTRRPGLHPD Trigger: GTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGGGCCCCACACAAGAAGGCACGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 72 bp | ATCAGCTCCAGCTGCTCCGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCACGGACAAGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ISSSCSEFSGYS*RTARAPRTRAE Trigger: CTCTGCCCTTGTCCGTGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCGGAGCAGCTGGAGCTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 72 bp | GTTGGGGAAGTCTACCACCACGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGTGATCAGCTCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VGEVYHHAASEA*PRGLGCDQLQL Trigger: CAGCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGCGTGGTGGTAGACTTCCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR CCA 72 bp | ACCACCACGCCGCCAGTGAAGCCTGCCCTCGTGGCCTaGGTTGTGATCAGCTCCAGCTGCTCCGAGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TTTPPVKPALVA*VVISSSCSEFS Trigger: TGAGAACTCGGAGCAGCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGCGTGGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR-3UTR CAA 90 bp | GCCGGTGTACTGGGTGTCAGGTCTGACCTCCTTGCCCTGGCGCCTGCGCCTCTCGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: AGVLGVRSDLLALAPAPLDFLLA*QSHCTA Trigger: TGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTC...GAGAGGCGCAGGCGCCAGGGCAAGGAGGTCAGACCTGACACCCAGTACACCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR CCA 72 bp | TCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTaGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SEQSGWPGRLQD*LQVWVARLYLQ Trigger: TTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| 3UTR-3UTR CAA 90 bp | CGCCTGCGCCTCTCCTTCTTCTCTAGGACCCATTCCCGGCTCTTCTTCACCAGGTTTCAGTCAGCCCCTTaGGCAGGGAGGTGGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RLRLSFFSRTHSRLFFTRFQSAP*AGRWKA Trigger: GGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAA...CCTGGTGAAGAAGAGCCGGGAATGGGTCCTAGAGAAGAAGGAGAGGCGCAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 72 bp | GACCCATTCCCGGCTCTTCTTCACCAGGTCCCTCCGTaGCTTCTTGTGTGGGGCCCGCTCACTGGTGAACAT | + |
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Preference number: 3 (lower is better) Translates to: DPFPALLHQVPP*LLVWGPLTGEH Trigger: ATGTTCACCAGTGAGCGGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAGAGCCGGGAATGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| 3UTR GCA 72 bp | CCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAGCCCCTTTGGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLTGEHGLGGLV*ILTFSQPLWQG Trigger: TCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATACTCCCAGGAGGGTGTaGGGATTACAGGATCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TAAGLAAGVGGQALSPIDTPRRV*GLQDLS Trigger: GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGT...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| 3UTR TCA 72 bp | CTGGTGAACATGGACTCGGAGGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTTGGCAGGGAGGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LVNMDSEAWSAS*LSVSPFGREVE Trigger: TTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| 3UTR CCA 72 bp | GGCCTGGTCTGCATCCTGACTTTCAGTCAGCCCCTTTaGCAGGGAGGTGGAAGGCCCAGAAAACAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLVCILTFSQPL*QGGGRPRKQTE Trigger: CTCTGTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGATTAGATACAGCGCACTCAGAAGCGGGGCTTGCGCTTTCGGCCGGTGTACTACGTCCGACTTCTTGTaGGCGTTGCAGAGCCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIRYSALRSGACAFGRCTTSDFL*ALQSHC Trigger: GCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGT...AGTACACCGGCCGAAAGCGCAAGCCCCGCTTCTGAGTGCGCTGTATCTAATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| 3UTR CCA 72 bp | GCCCAGAAAACAGACAGAGGTAGAACTTCTTTGCTTTaGCACTGTTGGGGAAGTCTACCACCACGCCGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQKTDRGRTSLL*HCWGSLPPRRQ Trigger: CTGGCGGCGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAAGAAGTTCTACCTCTGTCTGTTTTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCGCACAGGGACAGCCCTaGGGCTCCCTCTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIAQGQP*GSLFPS Trigger: AGAAGGGAAGAGGGAGCCTCAGGGCTGTCCCTGTGC...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLPLSEQSGWPGRLQDWAASEA*PRGLGC Trigger: ACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGC...CCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISFSGYS*RTARAP Trigger: TGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSHSLNRVGGQDGCRTAASEA*PRGLGC Trigger: ACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGC...AGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTTCAGTCAGCCCCTTTaGCAGGGAGGTGGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIFSQPL*QGGGRP Trigger: GGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAA...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCCCAACATGGCAGGGCTaGTGTCAATGCCCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIPTWQG*CQCPPS Trigger: ACTGGGTGGGCATTGACATCAGCCCTGCCATGTTGG...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGAGCAGTACAGGCGCCTaGCAGGGACGTCCGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLPLSEQSGWPGRLQDWSSTGA*QGRPTS Trigger: AGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCT...CCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCCTGCCCTCGTGGCCTaGGTTGTGATCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPLSEQSGWPGRLQDWLPALVA*VVISSS Trigger: GCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGG...CAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISAWSAS*LSVSPF Trigger: AAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGC...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCTTCAGTCAGCCCCTTTaGCAGGGAGGTGGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSLNRVGGQDGCRTGCFSQPL*QGGGRP Trigger: GGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAA...GCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQLPLSEQSGWPGRLQDWFRPVY*VSGLTS Trigger: GGAGGTCAGACCTGACACCCAGTACACCGGCCGAAA...CCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCCCGTGCCTTCTTGTGTaGGGCCTTCTTTGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISPCLLV*GLLCFG Trigger: GCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGG...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCACTTCTTGTTGGCGTTaGAGAGCCACTGCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQDGCRTGCRCGWPGSITSCWR*RATAQQ Trigger: CTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGT...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQDWLQVWVARLYLQLIAASEA*PRGLGC Trigger: ACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGC...AATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSHSLNRVGGQDGCRTFRPVY*VSGLTS Trigger: GGAGGTCAGACCTGACACCCAGTACACCGGCCGAAA...AGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCGCGTTGCAGAGCCACTaGACAGCAGAGATGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSHSLNRVGGQDGCRTGCALQSH*TAEMLM Trigger: CATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGC...GCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTCTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSHSLNRVGGQDGCRTLGGLV*ILTFSQ Trigger: CTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAG...AGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR GCA 90 bp | CCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGCTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSEQSGWPGRLQDWLQVLGGLV*ILTFSQ Trigger: CTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAG...CACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGCCTTTGGCAGGGAGGTaGAAGGCCCAGAAAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSEQSGWPGRLQDWLQVPLAGR*KAQKTD Trigger: GTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGG...CACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| 3UTR CAA 72 bp | AGGCGCCTGGCAGGGACGTCCGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCAGAGATGCTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLAGTSDFLLA*QSHCTAEMLMQ Trigger: CTGCATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| 3UTR CAA 72 bp | CAGTACAGGCGCCTGGCAGGGACGTCCGACTTCTTGTaGGCGTTGCAGAGCCACTGCACAGCAGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYRRLAGTSDFL*ALQSHCTAEML Trigger: CAGCATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLQDWLQVWVARLYLQLIFSGYS*RTARAP Trigger: TGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...AATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTTCTCAGGGTACAGCTaGAGGACAGCTCGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAAGLAAGVGGQALSPIDFSGYS*RTARAP Trigger: TGGGGCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| 3UTR CAA 72 bp | AAGCAGTACAGGCGCCTGGCAGGGACGTCCGACTTCTaGTTGGCGTTGCAGAGCCACTGCACAGCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KQYRRLAGTSDF*LALQSHCTAEM Trigger: CATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCGTAGTGTCCCTCTTCTaGGATATAATCTCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISVVSLF*DIISTQ Trigger: CTGAGTGGAGATTATATCTCAGAAGAGGGACACTAC...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCGTAGTGTCCCTCTTCTaGGATATAATCTCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIVVSLF*DIISTQ Trigger: CTGAGTGGAGATTATATCTCAGAAGAGGGACACTAC...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR TCA 90 bp | CGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTCCAACATGGCAGGGCTaGTGTCAATGCCCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQDWLQVWVARLYLQLIPTWQG*CQCPPS Trigger: ACTGGGTGGGCATTGACATCAGCCCTGCCATGTTGG...AATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISSVILV*MSIIRE Trigger: CTCACGGATGATTGACATCCAGACCAAGATGACTGA...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTGCGTTGCAGAGCCACTaGACAGCAGAGATGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLQDWLQVWVARLYLQLIALQSH*TAEMLM Trigger: CATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGC...AATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTGCCGCCAGTGAAGCCTaGCCTCGTGGCCTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLGLQDLSCQTQIPGTLAASEA*PRGLGC Trigger: ACAACCCAGGCCACGAGGGCAGGCTTCACTGGCGGC...AAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCATCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTAAGLAAGVGGQALSPSVILV*MSIIRE Trigger: CTCACGGATGATTGACATCCAGACCAAGATGACTGA...TGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAGAACTTCTTTGCTTTaGCACTGTTGGGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GQDGCRTGCRCGWPGSISRTSLL*HCWGSL Trigger: TAGACTTCCCCAACAGTGCCAAAGCAAAGAAGTTCT...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATCCTTTGGCAGGGAGGTaGAAGGCCCAGAAAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAAGLAAGVGGQALSPIDPLAGR*KAQKTD Trigger: GTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGG...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPLSEQSGWPGRLQDWLSVILV*MSIIRE Trigger: CTCACGGATGATTGACATCCAGACCAAGATGACTGA...CAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCCCTGCCCTCGTGGCCTaGGTTGTGATCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIFLSQTPRRVLGLQDLSPALVA*VVISSS Trigger: GCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGG...GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| 3UTR CAA 72 bp | AGGCCTGGTCTGCATCCTGACTTTCAGTCAGCCCCTTaGGCAGGGAGGTGGAAGGCCCAGAAAACAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPGLHPDFQSAP*AGRWKAQKTDR Trigger: TCTGTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTGGCGCCTGCGCCTCTCCTTCTTCTCTAGGACCCATTCCCGGCTCTTCTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPWRLRLSFFSRTHSRLFSVILV*MSIIRE Trigger: CTCACGGATGATTGACATCCAGACCAAGATGACTGA...GAAGAGCCGGGAATGGGTCCTAGAGAAGAAGGAGAGGCGCAGGCGCCAGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| CDS-3UTR CCA 90 bp | TCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCAGCAGTACAGGCGCCTaGCAGGGACGTCCGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIFLSQTPRRVLGLQDLSSSTGA*QGRPTS Trigger: AGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCT...GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTAGCAGTACAGGCGCCTaGCAGGGACGTCCGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVLGLQDLSCQTQIPGTLSSTGA*QGRPTS Trigger: AGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCT...AAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTCAGTCAGCCCCTTTaGCAGGGAGGTGGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGLQDLSCQTQIPGTLFSQPL*QGGGRP Trigger: GGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAA...AAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGVGITGSELPNPDPWNSAWSAS*LSVSPF Trigger: AAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGC...AGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR CCA 90 bp | TGTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGCCTTTGGCAGGGAGGTaGAAGGCCCAGAAAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVAQTGLELSIFLSQTPRPLAGR*KAQKTD Trigger: GTCTGTTTTCTGGGCCTTCCACCTCCCTGCCAAAGG...CCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGLQDLSCQTQIPGTLFRPVY*VSGLTS Trigger: GGAGGTCAGACCTGACACCCAGTACACCGGCCGAAA...AAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCTGTTTCGGCCGGTGTACTaGGTGTCAGGTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLVSDSQEGVGITGSELFRPVY*VSGLTS Trigger: GGAGGTCAGACCTGACACCCAGTACACCGGCCGAAA...CAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR TCA 90 bp | AGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLGLQDLSCQTQIPGTLAWSAS*LSVSPF Trigger: AAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGC...AAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR GCA 90 bp | GTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAACTTCTTGTTGGCGTTaGAGAGCCACTGCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPRLAWNFPSSCLRLPGTSCWR*RATAQQ Trigger: CTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGT...TCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCTGCGTCCGACTTCTTGTTaGCGTTGCAGAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLVSDSQEGVGITGSELRPTSC*RCRATA Trigger: TGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACG...CAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | GGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTAGTGAAACCTGCCCTCGTGGCCTaGGTTGTGATCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQDLSCQTQIPGTLLVKPALVA*VVISSS Trigger: GCTGGAGCTGATCACAACCCAGGCCACGAGGGCAGG...TTTCACTAAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGCTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LELSIFLSQTPRRVLGLQLGGLV*ILTFSQ Trigger: CTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAG...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGAGGATGGCTAAGATGTaGACAGGGACAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELSIFLSQTPRRVLGLQRMAKM*TGTALR Trigger: CCTCAGGGCTGTCCCTGTGCACATCTTAGCCATCCT...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
||
| CDS-3UTR CCA 90 bp | CATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCTGGGGCCTTCTTTGCTTTaGCACTGTTGGGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLLVSDSQEGVGITGSELGPSLL*HCWGSL Trigger: TAGACTTCCCCAACAGTGCCAAAGCAAAGAAGGCCC...CAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| 3UTR CAA 72 bp | CTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTaGGGATTACAGGATCTGAGCTGCCAAACCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSIFLSQTPRRV*GLQDLSCQTQI Trigger: GATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR TCA 90 bp | CATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCTGGTAGTGTCCCTCTTCTaGGATATAATCTCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLVSDSQEGVGITGSELVVSLF*DIISTQ Trigger: CTGAGTGGAGATTATATCTCAGAAGAGGGACACTAC...CAGCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTAGAACTTCTTTGCTTTaGCACTGTTGGGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGVGITGSELPNPDPWNSRTSLL*HCWGSL Trigger: TAGACTTCCCCAACAGTGCCAAAGCAAAGAAGTTCT...AGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR GCA 90 bp | ATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTAGTGAAAAAGCGTTGCAGAGCCACTaGACAGCAGAGATGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ITGSELPNPDPWNSFSEKALQSH*TAEMLM Trigger: CATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGC...TTTTTCACTAAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCAGAACTTCTTTGCTTTaGCACTGTTGGGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SIFLSQTPRRVLGLQDLSRTSLL*HCWGSL Trigger: TAGACTTCCCCAACAGTGCCAAAGCAAAGAAGTTCT...GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | GGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTTTCAGTCAGCCCCTTaGGCAGGGAGGTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGQDGCRTGCRCGWPGSIFQSAP*AGRWKA Trigger: GGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAA...GATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTACGTCCGACTTCTTGTaGGCGTTGCAGAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSSHSLNRVGGQDGCRTTSDFL*ALQSHC Trigger: GCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGT...AGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCTTTGCTTTGGCACTGTaGGGGAAGTCTACCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GQDGCRTGCRCGWPGSISFALAL*GKSTTT Trigger: CGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAA...GGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGTCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | CGGGCTGGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGTTTGCTTTGGCACTGTaGGGGAAGTCTACCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: RAGQLPLSEQSGWPGRLQFALAL*GKSTTT Trigger: CGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAA...CTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCCAGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGTGTGTGGGGCCTTCTTaGCTTTGGCACTGTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQLPLSEQSGWPGRLQDWCVGPS*LWHCWG Trigger: TCCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACA...CCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | CCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGCTGCAGGTGGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSEQSGWPGRLQDWLQVDFLLA*QSHCTA Trigger: TGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTC...CACCTGCAGCCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTTTCAGTCAGCCCCTTaGGCAGGGAGGTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAAGLAAGVGGQALSPIDFQSAP*AGRWKA Trigger: GGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAA...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS TCA 90 bp | ACTCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTGCATCCTaGCTTTCAGTCAGCCCCTTTGGCAGGGAGGTGGAAGGCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TRSLVNMDSEAWSAS*LSVSPFGREVEGPE Trigger: TTCTGGGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCTCCCACTCTCTGAACAGAGTGGGTGGCCAGGACGGCTGCAGGACTGGAGAGGTAGAACTTCTTaGCTTTGGCACTGTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQLPLSEQSGWPGRLQDWRGRTS*LWHCWG Trigger: TCCCCAACAGTGCCAAAGCAAAGAAGTTCTACCTCT...CCAGTCCTGCAGCCGTCCTGGCCACCCACTCTGTTCAGAGAGTGGGAGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS GCA 90 bp | CTTCTTCACCAGGTCCCTCCGTGCCTTCTTGTGTGGGGCCTTCTTTaGTTTGGCACTGTTGGGGAAGTCTACCACCACGCCGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLHQVPPCLLVWGLL*FGTVGEVYHHAASE Trigger: TTCACTGGCGGCGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS GCA 90 bp | GATTTCCACTCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAGCCCCTTTGGCAGGGAGGTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DFHSLTGEHGLGGLV*ILTFSQPLWQGGGR Trigger: CCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGAGTGGAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
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| CDS CCA 90 bp | GACCCTCTGGTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTaGTCTGGATGTCAATCATCCGTGAGCTGGTCTTGGGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DPLVNRGAPALAQSS*SGCQSSVSWSWAAP Trigger: TGGTGCTGCCCAAGACCAGCTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTACCAGAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071677.10 |
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| CDS-3UTR CAA 90 bp | GTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAACGTCCGACTTCTTGTaGGCGTTGCAGAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPRLAWNFPSSCLRLPGTSDFL*ALQSHC Trigger: GCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGT...TCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | ACGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAAGLAAGVGGQALSPIDSIIRE*RTYFRA Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...ATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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| CDS-3UTR CAA 90 bp | TTTGCTTTGGCACTGTTGGGGAAGTCTACCACCACGCCGCCAGTGAAGCCTGCCTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FALALLGKSTTTPPVKPASIIRE*RTYFRA Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...GGCAGGCTTCACTGGCGGCGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202478.4 |
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| CDS TCA 90 bp | CCCCCTCTGTATCTCGGTCCAAGGCGGCATCCAACATGGCAGGGCTaGTGTCAATGCCCACCCAGTAGTGTCCCTCTTCTGAGATATAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLYLGPRRHPTWQG*CQCPPSSVPLLRYN Trigger: ATTATATCTCAGAAGAGGGACACTACTGGGTGGGCATTGACATCAGCCCTGCCATGTTGGATGCCGCCTTGGACCGAGATACAGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000148549.2 |
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| CDS CCA 90 bp | GACCCTCTGGTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTaGTCTGGATGTCAATCATCCGTGAGTTGCGAACGTATTTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPLVNRGAPALAQSS*SGCQSSVSCERISG Trigger: CCCGGAAATACGTTCGCAACTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTACCAGAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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| CDS-3UTR CAA 90 bp | CGGCTGCAGGACTGGCTGCAGGTGTGGGTGGCCAGGCTCTATCTCCAATTGATTAGAGGTAGAACTTCTTaGCTTTGGCACTGTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLQDWLQVWVARLYLQLIRGRTS*LWHCWG Trigger: TCCCCAACAGTGCCAAAGCAAAGAAGTTCTACCTCT...AATCAATTGGAGATAGAGCCTGGCCACCCACACCTGCAGCCAGTCCTGCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGTTTCAGTCAGCCCCTTaGGCAGGGAGGTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WNFPSSCLRLPGGCWDYRFQSAP*AGRWKA Trigger: GGCCTTCCACCTCCCTGCCAAAGGGGCTGACTGAAA...CCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGCCCAGACTGGCCTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGTTTGCTTTGGCACTGTaGGGGAAGTCTACCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: CVAQTGLELSIFLSQTPRFALAL*GKSTTT Trigger: CGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAA...CCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAGGCCAGTCTGGGCAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS CCA 90 bp | TCTGGTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAGTTGCGAACGTATTTCCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGKQRSSSARSVILV*MSIIRELRTYFRAS Trigger: TGAAGCCCGGAAATACGTTCGCAACTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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| CDS-3UTR CAA 90 bp | GGTGTTGGGATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVGITGSELPNPDPWNSFDFLLA*QSHCTA Trigger: TGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTC...AAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAATCCCAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGTTTGCTTTGGCACTGTaGGGGAAGTCTACCACCACG | + |
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Preference number: 5 (lower is better) Translates to: LELSIFLSQTPRRVLGLQFALAL*GKSTTT Trigger: CGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAA...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | TCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGGATCTGAGCTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SIFLSQTPRRVLGLQDLSSIIRE*RTYFRA Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...GCTCAGATCCTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS-3UTR CAA 90 bp | CTGGAACTTTCCATCTTCTTGTCTCAGACTCCCAGGAGGGTGTTGGGATTACAGAGAGGTAGAACTTCTTaGCTTTGGCACTGTTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LELSIFLSQTPRRVLGLQRGRTS*LWHCWG Trigger: TCCCCAACAGTGCCAAAGCAAAGAAGTTCTACCTCT...CTGTAATCCCAACACCCTCCTGGGAGTCTGAGACAAGAAGATGGAAAGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000129691.8 |
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| CDS-3UTR CAA 90 bp | ATTACAGGATCTGAGCTGCCAAACCCAGATCCCTGGAACTCTTTTAGTGAAAAAGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: ITGSELPNPDPWNSFSEKDFLLA*QSHCTA Trigger: TGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTC...TTTTTCACTAAAAGAGTTCCAGGGATCTGGGTTTGGCAGCTCAGATCCTGTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS GCA 72 bp | GACCCATTCCCGGCTCTTCTTCACCAGGTCCCTCCGTaGCTTCTTGTGTGGGGCCCTGGCCAGAGACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: DPFPALLHQVPP*LLVWGPGQRQS Trigger: GCTCTGTCTCTGGCCAGGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAGAGCCGGGAATGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
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| CDS GCA 72 bp | CCTGGCCAGAGACAGAGCGAGAGGATGGCTAAGATGTaGACAGGGACAGCCCTGAGGCTCCCTCTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGQRQSERMAKM*TGTALRLPLPF Trigger: GAAGGGAAGAGGGAGCCTCAGGGCTGTCCCTGTGCACATCTTAGCCATCCTCTCGCTCTGTCTCTGGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
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| CDS CCA 72 bp | CCCTCCGTGCCTTCTTGTGTGGGGCCTTCTTTGCTTTaGCACTGTTGGGGAAGTCTACCACCACGCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSVPSCVGPSLL*HCWGSLPPRRQ Trigger: CTGGCGGCGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS GCA 72 bp | CAGGTCCCTCCGTGCCTTCTTGTGTGGGGCCTTCTTTaGTTTGGCACTGTTGGGGAAGTCTACCACCACGCC | + |
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Preference number: 6 (lower is better) Translates to: QVPPCLLVWGLL*FGTVGEVYHHA Trigger: GGCGTGGTGGTAGACTTCCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS CAA 72 bp | TCCCGGCTCTTCTTCACCAGGTCCCTCCGTGCCTTCTaGTGTGGGGCCTTCTTTGCTTTGGCACTGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRLFFTRSLRAF*CGAFFALALLG Trigger: CCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAGAGCCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS CAA 90 bp | AGGACCCATTCCCGGCTCTTCTTCACCAGGTCCCTCCGTGCCTTCTaGTGTGGGGCCTTCTTTGCTTTGGCACTGTTGGGGAAGTCTACC | + |
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Preference number: 6 (lower is better) Translates to: RTHSRLFFTRSLRAF*CGAFFALALLGKST Trigger: GGTAGACTTCCCCAACAGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAGAGCCGGGAATGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS GCA 72 bp | GACCCATTCCCGGCTCTTCTTCACCAGGTCCCTCCGTaGCTTCTTGTGTGGGGCCTTCTTTGCTTTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: DPFPALLHQVPP*LLVWGLLCFGT Trigger: AGTGCCAAAGCAAAGAAGGCCCCACACAAGAAGGCACGGAGGGACCTGGTGAAGAAGAGCCGGGAATGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111205.8 |
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| CDS GCA 72 bp | TCGCTCACTGGTGAACATGGACTCGGAGGCCTGGTCTaGATCCTGACTTTCAGTCAGCCCCTTTGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLTGEHGLGGLV*ILTFSQPLWQG Trigger: TCCCTGCCAAAGGGGCTGACTGAAAGTCAGGATGCAGACCAGGCCTCCGAGTCCATGTTCACCAGTGAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129691.8 |
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| CDS CCA 72 bp | CAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAGCTGGTCTTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QRSSSARSVILV*MSIIRELVLGS Trigger: GCTGCCCAAGACCAGCTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071677.10 |
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| CDS CAA 90 bp | AAGCAGTACAGGCGCCTGGCAGGGACGTCCGACTTCTTGTTGGCGTaGCAGAGCCACTGCACAGCAGAGATGCTGATGCAGCCATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: KQYRRLAGTSDFLLA*QSHCTAEMLMQPSK Trigger: TTTTGATGGCTGCATCAGCATCTCTGCTGTGCAGTGGCTCTGCAACGCCAACAAGAAGTCGGACGTCCCTGCCAGGCGCCTGTACTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 |
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| CDS TCA 72 bp | TATCTCGGTCCAAGGCGGCATCCAACATGGCAGGGCTaGTGTCAATGCCCACCCAGTAGTGTCCCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YLGPRRHPTWQG*CQCPPSSVPLL Trigger: CAGAAGAGGGACACTACTGGGTGGGCATTGACATCAGCCCTGCCATGTTGGATGCCGCCTTGGACCGAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000148549.2 |
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| CDS TCA 72 bp | GCTGATGTCAATGCCCACCCAGTAGTGTCCCTCTTCTaGGATATAATCTCCACTCAGCCCAGAACCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ADVNAHPVVSLF*DIISTQPRTAA Trigger: GGCTGCGGTTCTGGGCTGAGTGGAGATTATATCTCAGAAGAGGGACACTACTGGGTGGGCATTGACATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071677.10 ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000148549.2 |
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| CDS CCA 72 bp | GTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTaGTCTGGATGTCAATCATCCGTGAGCTGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VNRGAPALAQSS*SGCQSSVSWSW Trigger: CCAAGACCAGCTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071677.10 |
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| CDS CAA 72 bp | GGTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTaGGTCTGGATGTCAATCATCCGTGAGCTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GKQRSSSARSVI*VWMSIIRELVL Trigger: CAAGACCAGCTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071677.10 |
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| CDS CAA 72 bp | GGTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTaGGTCTGGATGTCAATCATCCGTGAGTTGCGAACG | + |
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Preference number: 6 (lower is better) Translates to: GKQRSSSARSVI*VWMSIIRELRT Trigger: CGTTCGCAACTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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| CDS CCA 72 bp | CAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTGGTCTaGATGTCAATCATCCGTGAGTTGCGAACGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: QRSSSARSVILV*MSIIRELRTYF Trigger: GAAATACGTTCGCAACTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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| CDS CCA 72 bp | GTAAACAGAGGAGCTCCAGCGCTCGCTCAGTCATCTTaGTCTGGATGTCAATCATCCGTGAGTTGCGAACGT | + |
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Preference number: 6 (lower is better) Translates to: VNRGAPALAQSS*SGCQSSVSCER Trigger: ACGTTCGCAACTCACGGATGATTGACATCCAGACCAAGATGACTGAGCGAGCGCTGGAGCTCCTCTGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085984.11 ENSMUST00000111205.8 ENSMUST00000202478.4 |
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