Pregenerated sensors for BUB1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040084Ensembl transcript IDs: ENSMUST00000038341.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGCACCTCCGACACGGCTaGTGGGCGCTCTGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWHLRHG*WALWPS Trigger: AGATGGCCAGAGCGCCCATCAGCCGTGTCGGAGGTG...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCACGTTCTCTTTGGCCCTaGGCACAGGGGGTGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPRSLWP*AQGVPS Trigger: GGATGGCACCCCCTGTGCCCAGGGCCAAAGAGAACG...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGGGCTGCTTGTCTTGCTaGGTGAGCAAAGCTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWGCLSC*VSKASG Trigger: CCCGGAAGCTTTGCTCACTCAGCAAGACAAGCAGCC...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGCCCACCCATTTCTGCTaGCAGCTCCCCCAGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWPTHFC*QLPQNR Trigger: TCTGTTCTGGGGGAGCTGGCAGCAGAAATGGGTGGG...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGGAAGTTCGTTCTCTTTaGCCCTGGGCACAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWEVRSL*PWAQGV Trigger: CACCCCCTGTGCCCAGGGCCAAAGAGAACGAACTTC...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGCCCGTTTCTGCTGCTaGAGAGCAGTGTGGCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAARFCC*RAVWPA Trigger: AGCCGGCCACACTGCTCTGCAGCAGCAGAAACGGGC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAGGCCCCGAAGCAATCTaGAATCTGGCTGGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPGPEAI*NLAGSS Trigger: AGAGGACCCAGCCAGATTGCAGATTGCTTCGGGGCC...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGCCCTCTTCTTTGCACTaGTCAACAGCTCGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWPSSLH*STARLP Trigger: GGGAAGCCGAGCTGTTGACCAGTGCAAAGAAGAGGG...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGCCTGAAGTGTGGACATaGCCCGCCCGTGCCGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEPEVWT*PARAVR Trigger: CCTTACGGCACGGGCGGGTCATGTCCACACTTCAGG...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAGTCTTCTCTGGGCATTaGGAACCTGTGGACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPVFSGH*EPVDHL Trigger: CAGGTGGTCCACAGGTTCTCAATGCCCAGAGAAGAC...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCAGGGGGTGCCATCCATaGCTGGGCTACAGGCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAARGCHP*LGYRLR Trigger: TCTAAGCCTGTAGCCCAGCCATGGATGGCACCCCCT...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAATCTTCTCTTCTTGCTaGCCCCCAGCTCCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPIFSSC*PPAPSC Trigger: GCAAGAAGGAGCTGGGGGCCAGCAAGAAGAGAAGAT...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| 3UTR CAA 72 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTaGAATAAACCAGATGAGGCTGCCAGGGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNL*NKPDEAARAQP Trigger: TGGCTGTGCCCTGGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCAGGAACCCTCTGCTCTaGCCTGGAGCTTTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAARNPLL*PGAFRA Trigger: TGCTCTGAAAGCTCCAGGTCAGAGCAGAGGGTTCCT...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGTGTAGTTTTGAGAACTaGAAGGGGTCTTCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWCSFEN*KGSSLG Trigger: GCCCAGAGAAGACCCCTTTCAGTTCTCAAAACTACA...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGCATTTAGGAACCCTCTaGTCTGACCTGGAGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWHLGTL*SDLELS Trigger: TGAAAGCTCCAGGTCAGAGCAGAGGGTTCCTAAATG...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCTGGGCACAGGGGGTaGCATCCATGGCTGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPGHRG*HPWLGY Trigger: GTAGCCCAGCCATGGATGGCACCCCCTGTGCCCAGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCGCCGGCCTGTCTGTaGTCCATGGGCCTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPPACL*SMGLAE Trigger: TTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCTGGAACTGTCTGTGCTaGGACTGCAGTCTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAWNCLC*DCSLSR Trigger: CCTGGACAGACTGCAGTCCCAGCACAGACAGTTCCA...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGCTGTGGACTTGTCACTaGCATTCAGAATCCGCACAA | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWLWTCH*HSESAQ Trigger: TTGTGCGGATTCTGAATGCCAGTGACAAGTCCACAG...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGGAGGCTCAAGTTCTGTaGGTTCATCACAAATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWEAQVL*VHHKYR Trigger: CCGATATTTGTGATGAACTCACAGAACTTGAGCCTC...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCTGGAGAAGCCAGATaGGTGGGTGGCCTCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPGEAR*VGGLTA Trigger: AGCCGTGAGGCCACCCACTCATCTGGCTTCTCCAGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGGATGTACTGGGAGCTaGGGAAGAAGACCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAGCTGS*GRRPGE Trigger: TTCTCCAGGTCTTCTTCCTCAGCTCCCAGTACATCC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGAGCTTTTCCAGAAGCTaGAAGCCTTTGATGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWSFSRS*KPLMED Trigger: ATCCTCCATCAAAGGCTTTCAGCTTCTGGAAAAGCT...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGACTGGAACTGTCTGTaGTGGGACTGCAGTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEDWNCL*WDCSLS Trigger: GGACAGACTGCAGTCCCAGCACAGACAGTTCCAGTC...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCCCATCTTCTTCCCTCTaGTCTTCAGCTCAGCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAPSSSL*SSAQLA Trigger: CGCTAGCTGAGCTGAAGAGCAGAGGGAAGAAGATGG...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGGCATCTTCTCTTCTTaGTGGCCCCCAGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEGIFSS*WPPAPS Trigger: AGAAGGAGCTGGGGGCCAGCAAGAAGAGAAGATGCC...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAATGGAAAGGAGTAGATaGCAAACGAGCTGCTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPMERSR*QTSCSS Trigger: GCTAGAGCAGCTCGTTTGGCATCTACTCCTTTCCAT...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCTCCCTCCAGGCACATaGCTTCACTCGCCTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSLPPGT*LHSPPP Trigger: TGGCGGAGGCGAGTGAAGCCATGTGCCTGGAGGGAG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCTCCTTCTTCTCTCCCTaGCTTCCTGGTGCTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAASFFSP*LPGAEN Trigger: GTTCTCAGCACCAGGAAGCCAGGGAGAGAAGAAGGA...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAAGCTTAGTGGACAGATaGAACAGGACAGAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPSLVDR*NRTEEL Trigger: GAGTTCCTCTGTCCTGTTCCATCTGTCCACTAAGCT...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGTGTTGGAGAAGATTCTaGAGGGTGGAGCAGTTTATA | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWCWRRF*RVEQFI Trigger: TATAAACTGCTCCACCCTTCAGAATCTTCTCCAACA...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATCTTCGATCTGCTTCTaGATCTCCTCCCTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPSSICF*ISSLFF Trigger: AAAGAAGAGGGAGGAGATGCAGAAGCAGATCGAAGA...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAAGATGCCAAACGAGCTaGTCTAGCAAAGTCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPRCQTS*SSKVTS Trigger: ACTTGTGACTTTGCTAGAGCAGCTCGTTTGGCATCT...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCGCTCTGGGAGCCGCCTaGCTGCTTGTCTTGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSALGAA*LLVLLS Trigger: ACTCAGCAAGACAAGCAGCCAGGCGGCTCCCAGAGC...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAAATGTTCTCAGCAGGTaGAATTTCCCTAGGATTCGA | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPNVLSR*NFPRIR Trigger: TCGAATCCTAGGGAAATTTCACCTGCTGAGAACATT...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCAATGCCCGTTTCTGCTaGTGCAGAGCAGTGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSNARFC*CRAVWP Trigger: CGGCCACACTGCTCTGCAGCAGCAGAAACGGGCATT...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCAGGGGCTCAGCCTTaGGTTCAATCCCTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPGAQP*VQSLPG Trigger: TCCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCTGTCTGTGCTGGGACTaGAGTCTGTCCAGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSCLCWD*SLSRGS Trigger: TGAGCCCCTGGACAGACTGCAGTCCCAGCACAGACA...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAGAATCAGGCTGTTCTTaGAAAATGTTCTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPESGCS*KMFSAG Trigger: ACCTGCTGAGAACATTTTGCAAGAACAGCCTGATTC...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCTCCTTCCAGGATCTGTaGAGTCCGAAAGCCACTATA | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAASFQDL*SPKATI Trigger: TATAGTGGCTTTCGGACTGCACAGATCCTGGAAGGA...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCACGTTCAATCCCTTCCTaGAATATTATGTCCGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KCALNKSQQPQTSSSPYPRSIPS*NIMSAF Trigger: GAAAGCGGACATAATATTCCAGGAAGGGATTGAACG...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCGAGAAGCCAGATGAGTaGGTGGCCTCACGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSEKPDE*VASRLS Trigger: AGAGAGCCGTGAGGCCACCCACTCATCTGGCTTCTC...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCATGGGAAGATTCTGAAGGGTaGAGCAGTTTATATACTGGT | + |
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Preference number: 4 (lower is better) Translates to: CALNKSQQPQTSSSPYPWEDSEG*SSLYTG Trigger: ACCAGTATATAAACTGCTCCACCCTTCAGAATCTTC...CCATGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCCTGTTCAGGTGGCTATaGAATGTGGCATCAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAALFRWL*NVASKA Trigger: GGCTTTTGATGCCACATTCCATAGCCACCTGAACAG...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGAGGGCTCTGTTCAGGTaGCTATGGAATGTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDERALFR*LWNVAS Trigger: TGATGCCACATTCCATAGCCACCTGAACAGAGCCCT...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCAGCTCCTTCTTGCTaGACAGCCTGCATTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPAPSC*TACIAF Trigger: GAAGGCAATGCAGGCTGTTCAGCAAGAAGGAGCTGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGATTTCAGATTCAAATaGCCGTTTCTGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAADFRFK*PFLLLQ Trigger: CTGCAGCAGCAGAAACGGGCATTTGAATCTGAAATC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCTCCTCCCTCTTCTTTaGACTGGTCAACAGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSLLPLL*TGQQLG Trigger: GCCGAGCTGTTGACCAGTGCAAAGAAGAGGGAGGAG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGCAGAAGACATGGAGGTaGTCCTTGAACAGGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEQKTWR*SLNRSK Trigger: CTTACTCCTGTTCAAGGAGCACCTCCATGTCTTCTG...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGTTACCGTGTACTGGCTaGGGAACTGCATTTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDELPCTG*GTAFRN Trigger: GTTCCTAAATGCAGTTCCCCAGCCAGTACACGGTAA...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR TCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGTATTCTTCAGCCCATaGAATATAGAACTGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAVFFSP*NIELGK Trigger: CTTGCCCAGTTCTATATTTCATGGGCTGAAGAATAC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCTGAACAGCCTGCATTaGCTTCAGCCTCCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSLNSLH*LQPPLH Trigger: ATGGAGAGGAGGCTGAAGGCAATGCAGGCTGTTCAG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCGGCATTGAGAACCTGTaGACCACCTGTAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSGIENL*TTCSRT Trigger: AGTCCTGCTACAGGTGGTCCACAGGTTCTCAATGCC...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCTGAGGAAGAAGACCTaGAGAAGCCAGATGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSLRKKT*RSQMSG Trigger: CCCACTCATCTGGCTTCTCCAGGTCTTCTTCCTCAG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCCATCCCAGAAGACATaGAGGTGCTCCTTGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSPSQKT*RCSLNR Trigger: CCTGTTCAAGGAGCACCTCCATGTCTTCTGGGATGG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCTGTGCTCCATGGGCCTaGCTGAAGTTCGTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSCAPWA*LKFVLF Trigger: AAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACA...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGAGCAGTTTATATACTaGTACCAAACAACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAEQFIY*YQTTWP Trigger: TGGCCATGTTGTTTGGTACCAGTATATAAACTGCTC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGAGACTCATCAAAAATaGAGAAAGGCATACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEETHQK*RKAYWN Trigger: GTTCCAGTATGCCTTTCTCCATTTTTGATGAGTCTC...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCGAGGACAGTATCTCATaGAAAGGAGTAGATGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSERRVHVIKLQKREGRSEDSIS*KGVDAK Trigger: TTTGGCATCTACTCCTTTCCATGAGATACTGTCCTC...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTCTCTTCAATAATTaGGCTCAGTTTCTTTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEALFNN*AQFLYD Trigger: ATCATAAAGAAACTGAGCCCAATTATTGAAGAGAGC...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 90 bp | CTGGGAAGCACGCTGGGAATCGACGTCACAGAGGCTGGATTGTCATaGGGCCTGCGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSTLGIDVTEAGLS*GLRPAGLSVLHGPG Trigger: GCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCAGCCTCTGTGACGTCGATTCCCAGCGTGCTTCCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | GTCATGAGGCCTGCGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTaGCTGAAGTTCGTTCTCTTTGGCCCTGGGCACAGGGGGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VMRPASRRPVCAPWA*LKFVLFGPGHRGCH Trigger: ATGGCACCCCCTGTGCCCAGGGCCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | TGGATTGTCATGAGGCCTGCGTCCCGCCGGCCTGTCTGTGCTCCATaGGCCTGGCTGAAGTTCGTTCTCTTTGGCCCTGGGCACAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WIVMRPASRRPVCAP*AWLKFVLFGPGHRG Trigger: CCCCCTGTGCCCAGGGCCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | CAGAGGCTGGATTGTCATGAGGCCTGCGTCCCGCCGGCCTGTCTGTaGTCCATGGGCCTGGCTGAAGTTCGTTCTCTTTGGCCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRLDCHEACVPPACL*SMGLAEVRSLWPWA Trigger: TGCCCAGGGCCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCAGCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | GCACGCTGGGAATCGACGTCACAGAGGCTGGATTGTCATGAGGCCTaGGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTGGCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARWESTSQRLDCHEA*VPPACLCSMGLAEV Trigger: AACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCAGCCTCTGTGACGTCGATTCCCAGCGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | AAAGCTTGTCGCGACACTCGAGACTGGAACTGTCTGTGCTGGGACTaGAGTCTGTCCAGGGGCTCAGCCTTGCGTTCAATCCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KACRDTRDWNCLCWD*SLSRGSALRSIPSW Trigger: CCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGGACAGACTGCAGTCCCAGCACAGACAGTTCCAGTCTCGAGTGTCGCGACAAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | AACTCCCGACATTTCCTGAGGCCCCGAAGCAATCTGCAATCTGGCTaGGTCCTCTGTAGGCATCTTCTCTTCTTGCTGGCCCCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSRHFLRPRSNLQSG*VLCRHLLFLLAPSS Trigger: GGAGCTGGGGGCCAGCAAGAAGAGAAGATGCCTACAGAGGACCCAGCCAGATTGCAGATTGCTTCGGGGCCTCAGGAAATGTCGGGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 90 bp | GGCCGGCTGACTCTTGCTTTGCCAAAGCTCCCTGAAGTGTGGACATaGCCCGCCCGTGCCGTAAGGGCTGTATGTTTTCTTTACTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLTLALPKLPEVWT*PARAVRAVCFLYSA Trigger: AGCTGAGTAAAGAAAACATACAGCCCTTACGGCACGGGCGGGTCATGTCCACACTTCAGGGAGCTTTGGCAAAGCAAGAGTCAGCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 90 bp | AGATTCAAATGCCCGTTTCTGCTGCTGCAGAGCAGTGTGGCCGGCTaGCTCTTGCTTTGCCAAAGCTCCCTGAAGTGTGGACATGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RFKCPFLLLQSSVAG*LLLCQSSLKCGHDP Trigger: CGGGTCATGTCCACACTTCAGGGAGCTTTGGCAAAGCAAGAGTCAGCCGGCCACACTGCTCTGCAGCAGCAGAAACGGGCATTTGAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | CTCTTCTTGCTGGCCCCCAGCTCCTTCTTGCTGAACAGCCTGCATTaGCTTCAGCCTCCTCTCCATCTCTTCGATCTGCTTCTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLLAPSSFLLNSLH*LQPPLHLFDLLLHL Trigger: GAGATGCAGAAGCAGATCGAAGAGATGGAGAGGAGGCTGAAGGCAATGCAGGCTGTTCAGCAAGAAGGAGCTGGGGGCCAGCAAGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | TGGTTGATACTAGGCTCAATCTTGCATGGTGTCATGACTGTCTGCTaGGCGCTCTCTTCCACGTACGGCGTAAAGCTGGGAAGCACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLILGSILHGVMTVC*ALSSTYGVKLGSTL Trigger: CAGCGTGCTTCCCAGCTTTACGCCGTACGTGGAAGAGAGCGCCCAGCAGACAGTCATGACACCATGCAAGATTGAGCCTAGTATCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | ACATGGTTGATACTAGGCTCAATCTTGCATGGTGTCATGACTGTCTaGTGGGCGCTCTCTTCCACGTACGGCGTAAAGCTGGGAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TWLILGSILHGVMTV*WALSSTYGVKLGST Trigger: CGTGCTTCCCAGCTTTACGCCGTACGTGGAAGAGAGCGCCCAGCAGACAGTCATGACACCATGCAAGATTGAGCCTAGTATCAACCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | GGGAGAAGAACAGTTAGCCAGGATCTTTTGTCCTTCCAGGATCTGTaGAGTCCGAAAGCCACTATAGGCAAACGCATCCAGCTGCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRTVSQDLLSFQDL*SPKATIGKRIQLHP Trigger: AGGGTGCAGCTGGATGCGTTTGCCTATAGTGGCTTTCGGACTGCACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | CTCTGGCTAAGTTTCCAGAGGAGTCCATCCCAGAAGACATGGAGGTaGTCCTTGAACAGGAGTAAGTGCGCTAGGTCTGCTATACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LWLSFQRSPSQKTWR*SLNRSKCARSAIPN Trigger: GTTGGGTATAGCAGACCTAGCGCACTTACTCCTGTTCAAGGAGCACCTCCATGTCTTCTGGGATGGACTCCTCTGGAAACTTAGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | AGTCCCTCGGGATCAGCAGCGATGCCCTTCGAGGACAGTATCTCATaGAAAGGAGTAGATGCCAAACGAGCTGCTCTAGCAAAGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSGSAAMPFEDSIS*KGVDAKRAALAKSQ Trigger: TTGTGACTTTGCTAGAGCAGCTCGTTTGGCATCTACTCCTTTCCATGAGATACTGTCCTCGAAGGGCATCGCTGCTGATCCCGAGGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | GAGGTGCTCTGGCTAAGTTTCCAGAGGAGTCCATCCCAGAAGACATaGAGGTGCTCCTTGAACAGGAGTAAGTGCGCTAGGTCTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: EVLWLSFQRSPSQKT*RCSLNRSKCARSAI Trigger: TATAGCAGACCTAGCGCACTTACTCCTGTTCAAGGAGCACCTCCATGTCTTCTGGGATGGACTCCTCTGGAAACTTAGCCAGAGCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTGCTCTAAACAAATCACAGCAGCCCCAGACCAGTTCTTCACCATACCCAGCTGAACAGCCTGCATaGCCTTCAGCCTCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCALNKSQQPQTSSSPYPAEQPA*PSASSP Trigger: TGGAGAGGAGGCTGAAGGCAATGCAGGCTGTTCAGC...TGGGTATGGTGAAGAACTGGTCTGGGGCTGCTGTGATTTGTTTAGAGCACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | CCTCTCCATCTCTTCGATCTGCTTCTGCATCTCCTCCCTCTTCTTTaGACTGGTCAACAGCTCGGCTTCCCTTCGTTCTTTCAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLHLFDLLLHLLPLL*TGQQLGFPSFFQLL Trigger: AAGAAGCTGAAAGAACGAAGGGAAGCCGAGCTGTTGACCAGTGCAAAGAAGAGGGAGGAGATGCAGAAGCAGATCGAAGAGATGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | AGCAGCGATGCCCTTCGAGGACAGTATCTCATGGAAAGGAGTAGATaGCAAACGAGCTGCTCTAGCAAAGTCACAAGTGTCCTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSDALRGQYLMERSR*QTSCSSKVTSVLRV Trigger: AACCCTGAGGACACTTGTGACTTTGCTAGAGCAGCTCGTTTGGCATCTACTCCTTTCCATGAGATACTGTCCTCGAAGGGCATCGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | GATGTACTGGGAGCTGAGGAAGAAGACCTGGAGAAGCCAGATGAGTaGGTGGCCTCACGGCTCTCTTCAATAATTGGGCTCAGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DVLGAEEEDLEKPDE*VASRLSSIIGLSFF Trigger: AAAGAAACTGAGCCCAATTATTGAAGAGAGCCGTGAGGCCACCCACTCATCTGGCTTCTCCAGGTCTTCTTCCTCAGCTCCCAGTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | AAGCCCCACCCATTTCTGCTGCCAGCTCCCCCAGAACAGACACTGTaGACTTGTCACTGGCATTCAGAATCCGCACAAAGAATTTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPHPFLLPAPPEQTL*TCHWHSESAQRIYS Trigger: GGAATAAATTCTTTGTGCGGATTCTGAATGCCAGTGACAAGTCCACAGTGTCTGTTCTGGGGGAGCTGGCAGCAGAAATGGGTGGGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCGCCCCCAGCTCCTTCTaGCTGAACAGCCTGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSCLHRNLLNKPDEAAAPSSF*LNSLHC Trigger: GCAATGCAGGCTGTTCAGCAAGAAGGAGCTGGGGGC...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 90 bp | ACGCATCCAGCTGCACCCTCAGGTCAACACTGTAGGAGAAGTCCATaGTCCTCACAGCGTGATCGTCCTTATTTACATAGTCATAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: THPAAPSGQHCRRSP*SSQRDRPYLHSHRG Trigger: ACCCCTATGACTATGTAAATAAGGACGATCACGCTGTGAGGATCATGGACTTCTCCTACAGTGTTGACCTGAGGGTGCAGCTGGATGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | CTGATGACTCTGAACTCTCTGCAAGGGGTCTCCTTCTTCTCTCCCTaGCTTCCTGGTGCTGAGAACATGGTTGATACTAGGCTCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LMTLNSLQGVSFFSP*LPGAENMVDTRLNL Trigger: AAGATTGAGCCTAGTATCAACCATGTTCTCAGCACCAGGAAGCCAGGGAGAGAAGAAGGAGACCCCTTGCAGAGAGTTCAGAGTCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGTCTCCTCCCTCTTCTTaGCACTGGTCAACAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLKSSCLHRNLLNKPDESPPSS*HWSTAR Trigger: CCGAGCTGTTGACCAGTGCAAAGAAGAGGGAGGAGA...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 90 bp | GACTGCAGTCTGTCCAGGGGCTCAGCCTTGCGTTCAATCCCTTCCTaGAATATTATGTCCGCTTTCTTGAAATTTTCTCTAGCTTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DCSLSRGSALRSIPS*NIMSAFLKFSLASY Trigger: ATACGAAGCTAGAGAAAATTTCAAGAAAGCGGACATAATATTCCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGGACAGACTGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | CTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGGCTGCCAACAACATGGCCATCTaGGTACTGACAGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSCLHRNLLNKPDEAANNMAI*VLTAAA Trigger: TGCAGCTGCTGTCAGTACCAAGATGGCCATGTTGTT...GGCAGCCTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCCAAGTGTCCTCAGGGTaGGGACAGAGAGTGACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSERRVHVIKLQKREGRSQVSSG*GQRVTF Trigger: GAACGTCACTCTCTGTCCCAACCCTGAGGACACTTG...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | CACAGTGAAAGGAGAGTACATGTTATAAAATTACAAAAGAGAGAAGGCAGAAGCGCCTGGCTGCTTGTCTaGCTGAGTGAGCAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSERRVHVIKLQKREGRSAWLLV*LSEQSF Trigger: GAAGCTTTGCTCACTCAGCAAGACAAGCAGCCAGGC...GCTTCTGCCTTCTCTCTTTTGTAATTTTATAACATGTACTCTCCTTTCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGCCTGTAGCAGGACTTTaGTCCTTTTTGTCTGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLKSSCLHRNLLNKPDEPVAGL*SFLSER Trigger: TCTTTCAGACAAAAAGGACAAAAGTCCTGCTACAGG...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS-3UTR CAA 90 bp | AGAGGGCTAAAAAGCAGCTGTCTGCACAGAAACCTTTTGAATAAACCAGATGAGAACAAATTCGCTGTGTaGGAGAAGATTCTGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RGLKSSCLHRNLLNKPDENKFAV*EKILKG Trigger: ACCCTTCAGAATCTTCTCCAACACAGCGAATTTGTT...CTCATCTGGTTTATTCAAAAGGTTTCTGTGCAGACAGCTGCTTTTTAGCCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 90 bp | AAAATGGAGAAAGGCATACTGGAACCTTTAGAATCAGGCTGTTCTTaGAAAATGTTCTCAGCAGGTGAAATTTCCCTAGGATTCGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: KMEKGILEPLESGCS*KMFSAGEISLGFEL Trigger: AAGCTCGAATCCTAGGGAAATTTCACCTGCTGAGAACATTTTGCAAGAACAGCCTGATTCTAAAGGTTCCAGTATGCCTTTCTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | CGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTGGCTaGAGTTCGTTCTCTTTGGCCCTGGGCACAGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RPAGLSVLHGPG*SSFSLALGTGG Trigger: ACCCCCTGTGCCCAGGGCCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | CCTGCGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTaGCTGAAGTTCGTTCTCTTTGGCCCTGGGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PASRRPVCAPWA*LKFVLFGPGHR Trigger: CCTGTGCCCAGGGCCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | GAATCGACGTCACAGAGGCTGGATTGTCATGAGGCCTaGGTCCCGCCGGCCTGTCTGTGCTCCATGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ESTSQRLDCHEA*VPPACLCSMGL Trigger: CAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCAGCCTCTGTGACGTCGATTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | ACGCTGGGAATCGACGTCACAGAGGCTGGATTGTCATaGGGCCTGCGTCCCGCCGGCCTGTCTGTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TLGIDVTEAGLS*GLRPAGLSVLH Trigger: ATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATCCAGCCTCTGTGACGTCGATTCCCAGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | GATTGTCATGAGGCCTGCGTCCCGCCGGCCTGTCTGTaGTCCATGGGCCTGGCTGAAGTTCGTTCTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: DCHEACVPPACL*SMGLAEVRSLW Trigger: CCAAAGAGAACGAACTTCAGCCAGGCCCATGGAGCACAGACAGGCCGGCGGGACGCAGGCCTCATGACAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | TCTGACCTGGAGCTTTCAGAGCACCTCCGACACGGCTaGTGGGCGCTCTGGCCATCTTCTTCCCTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SDLELSEHLRHG*WALWPSSSLCS Trigger: AGAGCAGAGGGAAGAAGATGGCCAGAGCGCCCATCAGCCGTGTCGGAGGTGCTCTGAAAGCTCCAGGTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | CGCGACACTCGAGACTGGAACTGTCTGTGCTGGGACTaGAGTCTGTCCAGGGGCTCAGCCTTGCGTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: RDTRDWNCLCWD*SLSRGSALRSI Trigger: GATTGAACGCAAGGCTGAGCCCCTGGACAGACTGCAGTCCCAGCACAGACAGTTCCAGTCTCGAGTGTCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | TGCCCGTTTCTGCTGCTGCAGAGCAGTGTGGCCGGCTaGCTCTTGCTTTGCCAAAGCTCCCTGAAGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CPFLLLQSSVAG*LLLCQSSLKCG Trigger: TCCACACTTCAGGGAGCTTTGGCAAAGCAAGAGTCAGCCGGCCACACTGCTCTGCAGCAGCAGAAACGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | AAAGCTTGTCGCGACACTCGAGACTGGAACTGTCTGTaGTGGGACTGCAGTCTGTCCAGGGGCTCAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KACRDTRDWNCL*WDCSLSRGSAL Trigger: CAAGGCTGAGCCCCTGGACAGACTGCAGTCCCAGCACAGACAGTTCCAGTCTCGAGTGTCGCGACAAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | CCAAGGGCCAAGAAAGCTTGTCGCGACACTCGAGACTaGAACTGTCTGTGCTGGGACTGCAGTCTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRAKKACRDTRD*NCLCWDCSLSR Trigger: CCTGGACAGACTGCAGTCCCAGCACAGACAGTTCCAGTCTCGAGTGTCGCGACAAGCTTTCTTGGCCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | AGGCTCCAAAGCCTCCTCCTCTTCATTCCCAAGGGCCAAGAAAGCTaGTCGCGACACTCGAGACTGGAACTGTCTGTGCTGGGACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RLQSLLLFIPKGQES*SRHSRLELSVLGLQ Trigger: CTGCAGTCCCAGCACAGACAGTTCCAGTCTCGAGTGTCGCGACAAGCTTTCTTGGCCCTTGGGAATGAAGAGGAGGAGGCTTTGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | CGTGTACTGGCTGGGGAACTGCATTTAGGAACCCTCTaGTCTGACCTGGAGCTTTCAGAGCACCTCCGACAC | + |
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Preference number: 6 (lower is better) Translates to: RVLAGELHLGTL*SDLELSEHLRH Trigger: GTGTCGGAGGTGCTCTGAAAGCTCCAGGTCAGAGCAGAGGGTTCCTAAATGCAGTTCCCCAGCCAGTACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | CTGGCCCCCAGCTCCTTCTTGCTGAACAGCCTGCATTaGCTTCAGCCTCCTCTCCATCTCTTCGATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LAPSSFLLNSLH*LQPPLHLFDLL Trigger: AAGCAGATCGAAGAGATGGAGAGGAGGCTGAAGGCAATGCAGGCTGTTCAGCAAGAAGGAGCTGGGGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 72 bp | CAATCTGGCTGGGTCCTCTGTAGGCATCTTCTCTTCTaGCTGGCCCCCAGCTCCTTCTTGCTGAACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QSGWVLCRHLLF*LAPSSFLLNSL Trigger: CAGGCTGTTCAGCAAGAAGGAGCTGGGGGCCAGCAAGAAGAGAAGATGCCTACAGAGGACCCAGCCAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | CATTTCCTGAGGCCCCGAAGCAATCTGCAATCTGGCTaGGTCCTCTGTAGGCATCTTCTCTTCTTGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: HFLRPRSNLQSG*VLCRHLLFLLA Trigger: GGCCAGCAAGAAGAGAAGATGCCTACAGAGGACCCAGCCAGATTGCAGATTGCTTCGGGGCCTCAGGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | GCTTCCACAGGGCTCTGTTCAGGTGGCTATGGAATGTaGCATCAAAAGCCCCACCCATTTCTGCTGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ASTGLCSGGYGM*HQKPHPFLLPA Trigger: AGCTGGCAGCAGAAATGGGTGGGGCTTTTGATGCCACATTCCATAGCCACCTGAACAGAGCCCTGTGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 72 bp | CTGTGCTGGGACTGCAGTCTGTCCAGGGGCTCAGCCTaGCGTTCAATCCCTTCCTGGAATATTATGTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LCWDCSLSRGSA*RSIPSWNIMSA Trigger: AGCGGACATAATATTCCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGGACAGACTGCAGTCCCAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 72 bp | AGCCTCCTCCTCTTCATTCCCAAGGGCCAAGAAAGCTaGTCGCGACACTCGAGACTGGAACTGTCTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLLFIPKGQES*SRHSRLELSVL Trigger: CAGCACAGACAGTTCCAGTCTCGAGTGTCGCGACAAGCTTTCTTGGCCCTTGGGAATGAAGAGGAGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | AGCAATCTGCAATCTGGCTGGGTCCTCTGTAGGCATCTTCTCTTCTaGCTGGCCCCCAGCTCCTTCTTGCTGAACAGCCTGCATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SNLQSGWVLCRHLLF*LAPSSFLLNSLHCL Trigger: AAGGCAATGCAGGCTGTTCAGCAAGAAGGAGCTGGGGGCCAGCAAGAAGAGAAGATGCCTACAGAGGACCCAGCCAGATTGCAGATTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | AAGCGGATTTCAGATTCAAATGCCCGTTTCTGCTGCTaGAGAGCAGTGTGGCCGGCTGACTCTTGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: KRISDSNARFCC*RAVWPADSCFA Trigger: GGCAAAGCAAGAGTCAGCCGGCCACACTGCTCTGCAGCAGCAGAAACGGGCATTTGAATCTGAAATCCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | TGTGCTGGGACTGCAGTCTGTCCAGGGGCTCAGCCTTaGGTTCAATCCCTTCCTGGAATATTATGTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: CAGTAVCPGAQP*VQSLPGILCPL Trigger: AAGCGGACATAATATTCCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGGACAGACTGCAGTCCCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | ACTCTTGCTTTGCCAAAGCTCCCTGAAGTGTGGACATaGCCCGCCCGTGCCGTAAGGGCTGTATGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TLALPKLPEVWT*PARAVRAVCFL Trigger: AAGAAAACATACAGCCCTTACGGCACGGGCGGGTCATGTCCACACTTCAGGGAGCTTTGGCAAAGCAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | GGATCAGCAGCGATGCCCTTCGAGGACAGTATCTCATaGAAAGGAGTAGATGCCAAACGAGCTGCTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSAAMPFEDSIS*KGVDAKRAALA Trigger: TGCTAGAGCAGCTCGTTTGGCATCTACTCCTTTCCATGAGATACTGTCCTCGAAGGGCATCGCTGCTGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | TGGCTAAGTTTCCAGAGGAGTCCATCCCAGAAGACATaGAGGTGCTCCTTGAACAGGAGTAAGTGCGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: WLSFQRSPSQKT*RCSLNRSKCAR Trigger: CCTAGCGCACTTACTCCTGTTCAAGGAGCACCTCCATGTCTTCTGGGATGGACTCCTCTGGAAACTTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | GCTGAGAACATGGTTGATACTAGGCTCAATCTTGCATaGTGTCATGACTGTCTGCTGGGCGCTCTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AENMVDTRLNLA*CHDCLLGALFH Trigger: GTGGAAGAGAGCGCCCAGCAGACAGTCATGACACCATGCAAGATTGAGCCTAGTATCAACCATGTTCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | AACAGTTGTAGGCGATACTGTGAACACCAGGGTGACTaGATAGCATCTTCTGCCCCGTCATTAGTCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NSCRRYCEHQGD*IASSAPSLVSS Trigger: GGAGCTGACTAATGACGGGGCAGAAGATGCTATTCAGTCACCCTGGTGTTCACAGTATCGCCTACAACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | GCCCTTCGAGGACAGTATCTCATGGAAAGGAGTAGATaGCAAACGAGCTGCTCTAGCAAAGTCACAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ALRGQYLMERSR*QTSCSSKVTSV Trigger: GACACTTGTGACTTTGCTAGAGCAGCTCGTTTGGCATCTACTCCTTTCCATGAGATACTGTCCTCGAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | ACAGTTAGCCAGGATCTTTTGTCCTTCCAGGATCTGTaGAGTCCGAAAGCCACTATAGGCAAACGCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: TVSQDLLSFQDL*SPKATIGKRIQ Trigger: CTGGATGCGTTTGCCTATAGTGGCTTTCGGACTGCACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS GCA 72 bp | CAGAAGACATGGAGGTGCTCCTTGAACAGGAGTAAGTaGGCTAGGTCTGCTATACCCAACAGATCTACATGG | + |
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Preference number: 6 (lower is better) Translates to: QKTWRCSLNRSK*ARSAIPNRSTW Trigger: CCATGTAGATCTGTTGGGTATAGCAGACCTAGCGCACTTACTCCTGTTCAAGGAGCACCTCCATGTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | CCTTCTTCTCTCCCTGGCTTCCTGGTGCTGAGAACATaGTTGATACTAGGCTCAATCTTGCATGGTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: PSSLPGFLVLRT*LILGSILHGVM Trigger: CATGACACCATGCAAGATTGAGCCTAGTATCAACCATGTTCTCAGCACCAGGAAGCCAGGGAGAGAAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS TCA 72 bp | GCTGCACCCTCAGGTCAACACTGTAGGAGAAGTCCATaGTCCTCACAGCGTGATCGTCCTTATTTACATAGT | + |
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Preference number: 6 (lower is better) Translates to: AAPSGQHCRRSP*SSQRDRPYLHS Trigger: ACTATGTAAATAAGGACGATCACGCTGTGAGGATCATGGACTTCTCCTACAGTGTTGACCTGAGGGTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 72 bp | TCTTCTCTCCCTGGCTTCCTGGTGCTGAGAACATGGTaGATACTAGGCTCAATCTTGCATGGTGTCATGACT | + |
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Preference number: 6 (lower is better) Translates to: SSLPGFLVLRTW*ILGSILHGVMT Trigger: AGTCATGACACCATGCAAGATTGAGCCTAGTATCAACCATGTTCTCAGCACCAGGAAGCCAGGGAGAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | CTTCTCCTTACAGTACATCATCTTCTCCTTCTTCTCCTCACAGCCTaGCTGATGACTCTGAACTCTCTGCAAGGGGTCTCCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLLTVHHLLLLLLTA*LMTLNSLQGVSFFS Trigger: AGAGAAGAAGGAGACCCCTTGCAGAGAGTTCAGAGTCATCAGCAAGGCTGTGAGGAGAAGAAGGAGAAGATGATGTACTGTAAGGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | ATATCGGGAGACACATCCTCATTTGTGGTGCCCACTTCTGTAGTTTaGAGAACTGAAAGGGGTCTTCTCTGGGCATTGAGAACCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ISGDTSSFVVPTSVV*RTERGLLWALRTCG Trigger: TCCACAGGTTCTCAATGCCCAGAGAAGACCCCTTTCAGTTCTCAAAACTACAGAAGTGGGCACCACAAATGAGGATGTGTCTCCCGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | AAGGGTGGAGCAGTTTATATACTGGTACCAAACAACATGGCCATCTaGGTACTGACAGCAGCTGCAAAGCTGGTCATAGTCCTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: KGGAVYILVPNNMAI*VLTAAAKLVIVLIQ Trigger: CTGAATGAGGACTATGACCAGCTTTGCAGCTGCTGTCAGTACCAAGATGGCCATGTTGTTTGGTACCAGTATATAAACTGCTCCACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 90 bp | CAACAGATCTACATGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTGCAGTCCGAAAGCCACTATAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: QQIYMVGRRTVSQDL*SFQDLCSPKATIGK Trigger: TTTGCCTATAGTGGCTTTCGGACTGCACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCATGTAGATCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CCA 72 bp | CTGTCCAGGGGCTCAGCCTTGCGTTCAATCCCTTCCTaGAATATTATGTCCGCTTTCTTGAAATTTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LSRGSALRSIPS*NIMSAFLKFSL Trigger: TAGAGAAAATTTCAAGAAAGCGGACATAATATTCCAGGAAGGGATTGAACGCAAGGCTGAGCCCCTGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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| CDS CAA 72 bp | GCATTGAGAACCTGTGGACCACCTGTAGCAGGACTTTaGTCCTTTTTGTCTGAAAGAGACTCATCAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: ALRTCGPPVAGL*SFLSERDSSKM Trigger: CATTTTTGATGAGTCTCTTTCAGACAAAAAGGACAAAAGTCCTGCTACAGGTGGTCCACAGGTTCTCAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038341.8 |
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