Pregenerated sensors for BTNL9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040283Ensembl transcript IDs: ENSMUST00000046522.13, ENSMUST00000066531.13, ENSMUST00000153999.3
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATACATTCATCTGTATAGGCCCTCTCTCTCTGTCCTCTTTCTGCTaGCTCTGCTTTGGCTGCAGGAGAGCAAAGCGCTGTCCAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: YTFICIGPLSLSSFC*LCFGCRRAKRCPGV Trigger: AACTCCTGGACAGCGCTTTGCTCTCCTGCAGCCAAAGCAGAGTCAGCAGAAAGAGGACAGAGAGAGAGGGCCTATACAGATGAATGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 90 bp | AGCTGCAAGAACACCACCAGAAGTTCTTTGGTGTGTTTCTCTCTGTaGAGTCATGACAAAGACCAGCAAGGAGTAGCAAGGCGAACCAAT | + |
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Preference number: 1 (lower is better) Translates to: SCKNTTRSSLVCFSL*SHDKDQQGVARRTN Trigger: ATTGGTTCGCCTTGCTACTCCTTGCTGGTCTTTGTCATGACTTCACAGAGAGAAACACACCAAAGAACTTCTGGTGGTGTTCTTGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CCA 90 bp | TTAATAGGGCAAAGGAGGGTGTGGACCTGTTTAGAAATTGTTCTTTaGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LIGQRRVWTCLEIVL*RESDLCCQNNSSSV Trigger: AACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAAGAACAATTTCTAAACAGGTCCACACCCTCCTTTGCCCTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 90 bp | ATGTATTTATACCTTCTCCAAACATCACATGTTCTCTCAAGCATCTaGTCTAGCAAAACATCATATACCCCTTTCCAGGCAGCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: MYLYLLQTSHVLSSI*SSKTSYTPFQAASR Trigger: TCTGGAAGCTGCCTGGAAAGGGGTATATGATGTTTTGCTAGAGCAGATGCTTGAGAGAACATGTGATGTTTGGAGAAGGTATAAATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAAATCGGCAGTGAAGTTGAAGATGTGTGCTATCCCTCGGGCTAGGCAACTGCTGACTCTGCTTTaGCTGCAGGAGAGCAAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LGKSAVKLKMCAIPRARQLLTLL*LQESKA Trigger: CGCTTTGCTCTCCTGCAGCCAAAGCAGAGTCAGCAG...TTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CAA 90 bp | TCTCGATCCACTTGCAAACACCATTCACGAATCAGCAGTGGCAGGTaGATCCAGGAGAAACCTCAAGGCTCTGTCAATCTGCTGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRSTCKHHSRISSGR*IQEKPQGSVNLLES Trigger: AGACTCCAGCAGATTGACAGAGCCTTGAGGTTTCTCCTGGATCAACCTGCCACTGCTGATTCGTGAATGGTGTTTGCAAGTGGATCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGAGGTAGTGGGAAAGAAGGTTAATAGGGCAAAGGAGGGTGTGGACCTGGTGTGTTTCTCTCTGTaGAGTCATGACAAAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: PPEVVGKKVNRAKEGVDLVCFSL*SHDKDQ Trigger: CTGGTCTTTGTCATGACTTCACAGAGAGAAACACAC...CAGGTCCACACCCTCCTTTGCCCTATTAACCTTCTTTCCCACTACCTCTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CAA 90 bp | ACAGCAGTTCAGTTCACACAAATCAGCAGCAGTATCTCGATCCACTaGCAAACACCATTCACGAATCAGCAGTGGCAGGTTGATCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TAVQFTQISSSISIH*QTPFTNQQWQVDPG Trigger: TCCTGGATCAACCTGCCACTGCTGATTCGTGAATGGTGTTTGCAAGTGGATCGAGATACTGCTGCTGATTTGTGTGAACTGAACTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CAA 90 bp | AGCTTATTTGATTCTGTGGGCTTTGTTCATACAGTGTCCTTGTCCTaGACCCTTCTGGCTTCTATAAACCTTCCTCCTCCCTTTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLFDSVGFVHTVSLS*TLLASINLPPPFQE Trigger: CTCCTGAAAGGGAGGAGGAAGGTTTATAGAAGCCAGAAGGGTCAAGGACAAGGACACTGTATGAACAAAGCCCACAGAATCAAATAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | CAATACCACACAGTGTTGTTCACTGTTGGGATGTATTTATACCTTCTCCAAACATCCCTTCAGTCTCTGTaGACCCCTATGAGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QYHTVLFTVGMYLYLLQTSLQSL*TPMSPA Trigger: AGCTGGGCTCATAGGGGTTCACAGAGACTGAAGGGA...TGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACACTGTGTGGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACCAGCAAGGAGTAGCAAGGCGAACCAATACCACACAGTGTTGTTCACTCTGGTACAAAGGAGATaGAAACTCTGGCATGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QRPARSSKANQYHTVLFTLVQRR*KLWHAK Trigger: TTTTGCATGCCAGAGTTTTCATCTCCTTTGTACCAG...AGTGAACAACACTGTGTGGTATTGGTTCGCCTTGCTACTCCTTGCTGGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | CTGCACACTCCAGAATCCTGCTATATACACAAACAATCTTTCATTTGTCTGTTTCTGTCCTCTTTCTGCTaGCTCTGCTTTGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHTPESCYIHKQSFICLFLSSFC*LCFGCR Trigger: CCTGCAGCCAAAGCAGAGTCAGCAGAAAGAGGACAG...AAACAGACAAATGAAAGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATAGGATGCTAGTAAGCTaGGGAAAGAGTCTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: WRESDLCCQNNSSSVHTNRMLVS*GKSLKS Trigger: GGACTTCAGACTCTTTCCTCAGCTTACTAGCATCCT...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCATCCTGCAAATTATCATTGCAATAGTACTATCCCCATTTCCCTTTTCCAGGCAGGAGGATTTCTaGGTTCAAGGTCATCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: WLILQIIIAIVLSPFPFSRQEDF*VQGHPG Trigger: ACCAGGATGACCTTGAACTCAGAAATCCTCCTGCCT...GGAAAAGGGAAATGGGGATAGTACTATTGCAATGATAATTTGCAGGATGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGCATCTCTAAAGCTCTCAACACTTATTTTTGAAGAACAATATTTCCCTGCACAAGCACTCTACCACTaGTTACCCCCAGCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QASLKLSTLIFEEQYFPAQALYH*LPPASH Trigger: GTGGCTGGCTGGGGGTAAGCAGTGGTAGAGTGCTTG...TGCAGGGAAATATTGTTCTTCAAAAATAAGTGTTGAGAGCTTTAGAGATGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCAGCAAAACATCTTCTACGTGTCTGCTTCAGCAAAAACATCCTCTGATTCTTCATATCAAGGCTaGGCAAGGCAACCCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CSQQNIFYVSASAKTSSDSSYQG*ARQPSR Trigger: CCTACTGGGTTGCCTTGCCCAGCCTTGATATGAAGA...ATCAGAGGATGTTTTTGCTGAAGCAGACACGTAGAAGATGTTTTGCTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGTTTCCAGAAAAGCATTACATGACACAACTGAGTCTCCGAAGAAACCAGTGGGTCTCTGTGTCTaGTCCTATCAATTGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: KTVSRKALHDTTESPKKPVGLCV*SYQLLD Trigger: ATCCAGCAATTGATAGGAGCAGACACAGAGACCCAC...TGGTTTCTTCGGAGACTCAGTTGTGTCATGTAATGCTTTTCTGGAAACTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTTCACTGTTGGGATGTATTTATACCTTCTCCAAACATCACATGTTCTCTTCCCATCTTCTACACTaGACACTCCAGAATCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CCSLLGCIYTFSKHHMFSSHLLH*TLQNPA Trigger: AGCAGGATTCTGGAGTGTGCAGTGTAGAAGATGGGA...AGAGAACATGTGATGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGTTTCCAGAAAAGCATTACATGACACAACTGAGTCTCCGAAGAAACCACCTCAAATTCTCCTATaGCTCACTTCTAGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KTVSRKALHDTTESPKKPPQILL*LTSSSL Trigger: AAGAGAGCTAGAAGTGAGGCATAGGAGAATTTGAGG...TGGTTTCTTCGGAGACTCAGTTGTGTCATGTAATGCTTTTCTGGAAACTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCAGCAAAACATCTTCTACGTGTCTGCTTCAGCAAAAACATCCTCTGATCACACTCCAGAATCCTaGTATATACACAAACAATCT | + |
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Preference number: 2 (lower is better) Translates to: CSQQNIFYVSASAKTSSDHTPES*YIHKQS Trigger: AGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTG...ATCAGAGGATGTTTTTGCTGAAGCAGACACGTAGAAGATGTTTTGCTGAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR GCA 90 bp | TTTGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAACCTGCAAATTATCATTaGAATAGTACTATCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: FGGNPICVVRITAVQFTQPANYH*NSTIPI Trigger: AATGGGGATAGTACTATTGCAATGATAATTTGCAGG...TTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCAGCAAAACATCTTCTACGTGTCTGCTTCAGCAAAAACATCCTCTGATGCTTATTTGATTCTGTaGGCTTTGTTCATACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSQQNIFYVSASAKTSSDAYLIL*ALFIQC Trigger: ACACTGTATGAACAAAGCCCACAGAATCAAATAAGC...ATCAGAGGATGTTTTTGCTGAAGCAGACACGTAGAAGATGTTTTGCTGAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAAGTGTTGTTCACTGTTaGGATGTATTTATACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FGGNPICVVRITAVQFTQSVVHC*DVFIPS Trigger: AGAAGGTATAAATACATCCCAACAGTGAACAACACT...TTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTTCACTGTTGGGATGTATTTATACCTTCTCCAAACATCACATGTTCTCTCATCACTGCCATTATTaGATTTCATGTTCGAATTGC | + |
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Preference number: 2 (lower is better) Translates to: CCSLLGCIYTFSKHHMFSHHCHY*ISCSNC Trigger: GCAATTCGAACATGAAATTCAATAATGGCAGTGATG...AGAGAACATGTGATGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 72 bp | TGTGCTATCCCTCGGGCTAGGCAAGCACTCTACCACTaGTTACCCCCAGCCAGCCACATCACTGCCATTATT | + |
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Preference number: 3 (lower is better) Translates to: CAIPRARQALYH*LPPASHITAII Trigger: AATAATGGCAGTGATGTGGCTGGCTGGGGGTAAGCAGTGGTAGAGTGCTTGCCTAGCCCGAGGGATAGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 72 bp | CTTGCAAACACCATTCACGAATCAGCAGTGGCAGGTTaGTCCAGGAGAAACCTCAAGGCTCTGTCAATCTGC | + |
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Preference number: 3 (lower is better) Translates to: LANTIHESAVAG*SRRNLKALSIC Trigger: GCAGATTGACAGAGCCTTGAGGTTTCTCCTGGATCAACCTGCCACTGCTGATTCGTGAATGGTGTTTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 72 bp | CTCAAGGCTCTGTCAATCTGCTGGAGTCTGCAGAAGTaGCAAGAAGCTGCAAGAACACCACCAGAAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LKALSICWSLQK*QEAARTPPEVL Trigger: AAGAACTTCTGGTGGTGTTCTTGCAGCTTCTTGGCACTTCTGCAGACTCCAGCAGATTGACAGAGCCTTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CCA 72 bp | TCGATCCACTTGCAAACACCATTCACGAATCAGCAGTaGCAGGTTGATCCAGGAGAAACCTCAAGGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SIHLQTPFTNQQ*QVDPGETSRLC Trigger: ACAGAGCCTTGAGGTTTCTCCTGGATCAACCTGCCACTGCTGATTCGTGAATGGTGTTTGCAAGTGGATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | CCACCAGAGGTAGTGGGAAAGAAGGTTAATAGGGCAAAGGAGGGTGTGGACCTGTTCCACTTCAGCTCTTaGAATCTGACACACTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PPEVVGKKVNRAKEGVDLFHFSS*NLTHLK Trigger: CTTCAAGTGTGTCAGATTCAAAGAGCTGAAGTGGAA...CAGGTCCACACCCTCCTTTGCCCTATTAACCTTCTTTCCCACTACCTCTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 72 bp | GATGAGTTAACCAGAGACGCTATCAATCACCACCTTTaGTTTCTGGGGTTTGGGGGAGCACCTGAGAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: DELTRDAINHHL*FLGFGGAPESK Trigger: TTTACTCTCAGGTGCTCCCCCAAACCCCAGAAAGCAAAGGTGGTGATTGATAGCGTCTCTGGTTAACTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 72 bp | GTCAATCTGCTGGAGTCTGCAGAAGTGCCAAGAAGCTaGAAGAACACCACCAGAAGTTCTTTGGTGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: VNLLESAEVPRS*KNTTRSSLVCF Trigger: GAAACACACCAAAGAACTTCTGGTGGTGTTCTTGCAGCTTCTTGGCACTTCTGCAGACTCCAGCAGATTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | AAAATAAGATGCCGTGAGACTAGGCACATCTCTTCATATCAAGGCTGGGCAAGGAAATCGGCAGTGAAGTaGAAGATGTGTGCTATCCCT | + |
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Preference number: 3 (lower is better) Translates to: KIRCRETRHISSYQGWARKSAVK*KMCAIP Trigger: AGGGATAGCACACATCTTCAACTTCACTGCCGATTT...CCTTGCCCAGCCTTGATATGAAGAGATGTGCCTAGTCTCACGGCATCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCAGCAAAACATCTTCTACGTGTCTGCTTCAGCAAAAACATCCTCTGATTTTGCTTTCTGGGGTTaGGGGGAGCACCTGAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: CSQQNIFYVSASAKTSSDFAFWG*GEHLRV Trigger: TACTCTCAGGTGCTCCCCCAAACCCCAGAAAGCAAA...ATCAGAGGATGTTTTTGCTGAAGCAGACACGTAGAAGATGTTTTGCTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 72 bp | CAGAAGTTCTTTGGTGTGTTTCTCTCTGTGAAGTCATaGCAAAGACCAGCAAGGAGTAGCAAGGCGAACCAA | + |
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Preference number: 3 (lower is better) Translates to: QKFFGVFLSVKS*QRPARSSKANQ Trigger: TTGGTTCGCCTTGCTACTCCTTGCTGGTCTTTGTCATGACTTCACAGAGAGAAACACACCAAAGAACTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 72 bp | AACACCACCAGAAGTTCTTTGGTGTGTTTCTCTCTGTaGAGTCATGACAAAGACCAGCAAGGAGTAGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: NTTRSSLVCFSL*SHDKDQQGVAR Trigger: CCTTGCTACTCCTTGCTGGTCTTTGTCATGACTTCACAGAGAGAAACACACCAAAGAACTTCTGGTGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CCA 72 bp | TGCCAAGAAGCTGCAAGAACACCACCAGAAGTTCTTTaGTGTGTTTCTCTCTGTGAAGTCATGACAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: CQEAARTPPEVL*CVSLCEVMTKT Trigger: GGTCTTTGTCATGACTTCACAGAGAGAAACACACCAAAGAACTTCTGGTGGTGTTCTTGCAGCTTCTTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATCAGCCACTGCACCTATaGTTAGGAGCATCACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: WRESDLCCQNNSSSVHTNQPLHL*LGASQE Trigger: TTCTTGTGATGCTCCTAACAATAGGTGCAGTGGCTG...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 72 bp | CTGCTTACCCCCAGCCAGCCACATCACTGCCATTATTaGATTTCATGTTCGAATTGCCACATACATGATCAA | + |
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Preference number: 3 (lower is better) Translates to: LLTPSQPHHCHY*ISCSNCHIHDQ Trigger: TTGATCATGTATGTGGCAATTCGAACATGAAATTCAATAATGGCAGTGATGTGGCTGGCTGGGGGTAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CCA 72 bp | CAAAGGAGGGTGTGGACCTGTTTAGAAATTGTTCTTTaGAGGGAATCCGATCTGTGTTGTCAGAATAACAGC | + |
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Preference number: 3 (lower is better) Translates to: QRRVWTCLEIVL*RESDLCCQNNS Trigger: GCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAAGAACAATTTCTAAACAGGTCCACACCCTCCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR TCA 72 bp | AAAAGCTCTCCCAAGAATGTGAGGATGCTAGTAAGCTaGGGAAAGAGTCTGAAGTCCTTTCCCCTACTTAAA | + |
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Preference number: 3 (lower is better) Translates to: KSSPKNVRMLVS*GKSLKSFPLLK Trigger: TTTAAGTAGGGGAAAGGACTTCAGACTCTTTCCTCAGCTTACTAGCATCCTCACATTCTTGGGAGAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR GCA 72 bp | TACCTTCTCCAAACATCACATGTTCTCTCAAGCATCTaGTCTAGCAAAACATCATATACCCCTTTCCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YLLQTSHVLSSI*SSKTSYTPFQA Trigger: TGCCTGGAAAGGGGTATATGATGTTTTGCTAGAGCAGATGCTTGAGAGAACATGTGATGTTTGGAGAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR CCA 72 bp | CAAGGCGAACCAATACCACACAGTGTTGTTCACTGTTaGGATGTATTTATACCTTCTCCAAACATCACATGT | + |
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Preference number: 3 (lower is better) Translates to: QGEPIPHSVVHC*DVFIPSPNITC Trigger: ACATGTGATGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACACTGTGTGGTATTGGTTCGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | CTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATGGCAAAATGAGCCCAGCTTATTaGATTCTGTGGGCTTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: LLFQKRADLPRISTKHGKMSPAY*ILWALF Trigger: GAACAAAGCCCACAGAATCAAATAAGCTGGGCTCAT...TTTGCCATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | AAGACAGTTTCCAGAAAAGCATTACATGACACAACTGAGTCTCCGAAGAAACCACTACACATAGAAACCTaGTCTCAAAGGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KTVSRKALHDTTESPKKPLHIET*SQRRER Trigger: TCTCTCTCTCCTTTGAGACAAGGTTTCTATGTGTAG...TGGTTTCTTCGGAGACTCAGTTGTGTCATGTAATGCTTTTCTGGAAACTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| 3UTR-3UTR CAA 90 bp | CTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATGGCAAATTGATTCTGTGGGCTTaGTTCATACAGTGTCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LLFQKRADLPRISTKHGKLILWA*FIQCPC Trigger: ACAAGGACACTGTATGAACAAAGCCCACAGAATCAA...TTTGCCATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS-3UTR CCA 90 bp | CTGGGGAAATCGGCAGTGAAGTTGAAGATGTGTGCTATCCCTCGGGCTAGGCAAAGTAGTGGCGGCCGCTaGAGAAGCGCTCCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LGKSAVKLKMCAIPRARQSSGGR*RSAPGS Trigger: TGAGCCGGGAGCGCTTCTCCAGCGGCCGCCACTACT...TTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS-3UTR CCA 90 bp | CCACCAGAGGTAGTGGGAAAGAAGGTTAATAGGGCAAAGGAGGGTGTGGACCTGCGCCCCTGCGGCTCCTaGTACAGGTACACCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: PPEVVGKKVNRAKEGVDLRPCGS*YRYTTL Trigger: CAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCG...CAGGTCCACACCCTCCTTTGCCCTATTAACCTTCTTTCCCACTACCTCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS-3UTR TCA 90 bp | CCACCAGAGGTAGTGGGAAAGAAGGTTAATAGGGCAAAGGAGGGTGTGGACCTGAGCCATCAGACACGTTaGAGAAAGACAGCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PPEVVGKKVNRAKEGVDLSHQTR*RKTASR Trigger: CCGGGAAGCTGTCTTTCTTCAACGTGTCTGATGGCT...CAGGTCCACACCCTCCTTTGCCCTATTAACCTTCTTTCCCACTACCTCTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAATCGGCAGTGAAGTTGAAGATGTGTGCTATCCCTCGGGCTAGGCAACGGACCTCCTCTCCCTaGTTCACCTGTTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSAVKLKMCAIPRARQRTSSP*FTCFSW Trigger: CCAAGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCG...TTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATCGGAACTGTGCCATCTaGAGGCTGGAGCGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRESDLCCQNNSSSVHTNRNCAI*RLERPC Trigger: GCAGGGGCGCTCCAGCCTGCAGATGGCACAGTTCCG...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATCTCAGCACGCAGGTCTaGTCCGAGAACCGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRESDLCCQNNSSSVHTNLSTQV*SENRCG Trigger: CCCGCAGCGGTTCTCGGAGCAGACCTGCGTGCTGAG...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | ACTCCTCTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATCCAGGAACCAGCGGCTaGGCCGGCCCACGTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLLFQKRADLPRISTKHPGTSG*AGPRAP Trigger: AGGTGCACGTGGGCCGGCGCAGCCGCTGGTTCCTGG...ATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAGAGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | TGGCTCATCCTGCAAATTATCATTGCAATAGTACTATCCCCATTTCCCTTTTCCCTGCGGGTCCCCAGCTaGAATACTGGGCACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLILQIIIAIVLSPFPFSLRVPS*NTGHPQ Trigger: CTGGGGGTGCCCAGTATTGCAGCTGGGGACCCGCAG...GGAAAAGGGAAATGGGGATAGTACTATTGCAATGATAATTTGCAGGATGAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAATCGGCAGTGAAGTTGAAGATGTGTGCTATCCCTCGGGCTAGGCAAGTTCACGCTTCCCTCTaGAATGTCATAGGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSAVKLKMCAIPRARQVHASL*NVIGFK Trigger: TTTGAAGCCTATGACATTGCAGAGGGAAGCGTGAAC...TTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | ATCCAATGCACTTTTCTGGGGAAATCGGCAGTGAAGTaGAAGATGTGTGCTATCCCTCGGGCTAGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQCTFLGKSAVK*KMCAIPRARQA Trigger: TGCTTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAGAAAAGTGCATTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATTCCGCTGCATATTGCTaGGCTGCTCTCCACTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRESDLCCQNNSSSVHTNSAAYC*AALHSA Trigger: GGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGGA...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | GATTCTGTGGGCTTTGTTCATACAGTGTCCTTGTCCTaGACCCTTCTGGCTTCTATAAACCTTCCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSVGFVHTVSLS*TLLASINLPPP Trigger: GGGAGGAGGAAGGTTTATAGAAGCCAGAAGGGTCAAGGACAAGGACACTGTATGAACAAAGCCCACAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATGGCAAACGACGCGGGCCAAAATaGACTCCTCAGGGCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFQKRADLPRISTKHGKRRGPK*TPQGPT Trigger: TGTTGGGCCCTGAGGAGTCCATTTTGGCCCGCGTCG...TTTGCCATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCATCCTGCAAATTATCATTGCAATAGTACTATCCCCATTTCCCTTTTCCGCTCTCCACTCAGCCTaGCCTTCAGACCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLILQIIIAIVLSPFPFSALHSA*PSDLLQ Trigger: CTGGAGAAGGTCTGAAGGCCAGGCTGAGTGGAGAGC...GGAAAAGGGAAATGGGGATAGTACTATTGCAATGATAATTTGCAGGATGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | AGCAGGAAAAAGAACCAGCAGCAGCCACTGCACCTATaGTTAGGAGCATCACAAGAACACCAAGCTACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKKNQQQPLHL*LGASQEHQATQ Trigger: TTGAGTAGCTTGGTGTTCTTGTGATGCTCCTAACAATAGGTGCAGTGGCTGCTGCTGGTTCTTTTTCCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | CAGTTCACACAAATCAGCAGCAGTATCTCGATCCACTaGCAAACACCATTCACGAATCAGCAGTGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QFTQISSSISIH*QTPFTNQQWQV Trigger: AACCTGCCACTGCTGATTCGTGAATGGTGTTTGCAAGTGGATCGAGATACTGCTGCTGATTTGTGTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR TCA 90 bp | ATACATGATCAAGGAAGTCGCTATAAACTGTATTCTGAGCCAAAGGTGAACTCACGGATGTCTCCAGACTaGACAGGCCTTGGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHDQGSRYKLYSEPKVNSRMSPD*TGLGHS Trigger: AGAATGCCCAAGGCCTGTTCAGTCTGGAGACATCCG...TGAGTTCACCTTTGGCTCAGAATACAGTTTATAGCGACTTCCTTGATCATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | CAATACCACACAGTGTTGTTCACTGTTGGGATGTATTTATACCTTCTCCAAACATCTCCACTGAAGCCCTaGAGGGAGATGTGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYHTVLFTVGMYLYLLQTSPLKP*REMCGS Trigger: AGACCCACACATCTCCCTCCAGGGCTTCAGTGGAGA...TGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACACTGTGTGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCATCCTGCAAATTATCATTGCAATAGTACTATCCCCATTTCCCTTTTCCGATGGCTTCAGACTCTaGAGAAAGGCACTGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLILQIIIAIVLSPFPFSDGFRL*RKALTL Trigger: CAGGGTCAGTGCCTTTCTCCAGAGTCTGAAGCCATC...GGAAAAGGGAAATGGGGATAGTACTATTGCAATGATAATTTGCAGGATGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | AGACATTTCCACTTCAGCTCTTTGAATCTGACACACTaGAAGCCTACCTCAAGGTATGTCAAGTCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHFHFSSLNLTH*KPTSRYVKSLQ Trigger: CTGCAGGGACTTGACATACCTTGAGGTAGGCTTCAAGTGTGTCAGATTCAAAGAGCTGAAGTGGAAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | CAAGCATCTCTAAAGCTCTCAACACTTATTTTTGAAGAACAATATTTCCCTGCATGCATATTGCTGGGCTaGTCTCCACTCAGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QASLKLSTLIFEEQYFPACILLG*SPLSLA Trigger: GGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCA...TGCAGGGAAATATTGTTCTTCAAAAATAAGTGTTGAGAGCTTTAGAGATGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | ACTCCTCTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATACATCCGCTGCATATTaGTGGGCTGCTCTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLLFQKRADLPRISTKHTSAAY*WAALHS Trigger: TGAGTGGAGAGCAGCCCAGCAATATGCAGCGGATGT...ATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAGAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | AAGACAGTTTCCAGAAAAGCATTACATGACACAACTGAGTCTCCGAAGAAACCAGTGAAGCTGAAGATGTaGGAGCCATCAGACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTVSRKALHDTTESPKKPVKLKM*EPSDTL Trigger: CAACGTGTCTGATGGCTCGCACATCTTCAGCTTCAC...TGGTTTCTTCGGAGACTCAGTTGTGTCATGTAATGCTTTTCTGGAAACTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTTCAGAAAAGAGCAGACCTCCCAAGGATATCAACCAAACATGGCAAATCTCCACTGAACCTTTaGCTTGGGGTACCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLFQKRADLPRISTKHGKSPLNL*LGVPAT Trigger: AGTGGCTGGTACCCCAAGCCAAAGGTTCAGTGGAGA...TTTGCCATGTTTGGTTGATATCCTTGGGAGGTCTGCTCTTTTCTGAAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCATCCTGCAAATTATCATTGCAATAGTACTATCCCCATTTCCCTTTTCCTCCAGGGGGACATTCTaGGTAGGAACACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLILQIIIAIVLSPFPFSSRGTF*VGTHLQ Trigger: TTGCAGATGTGTTCCTACCCAGAATGTCCCCCTGGA...GGAAAAGGGAAATGGGGATAGTACTATTGCAATGATAATTTGCAGGATGAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | AGTTTAGCTGTGGGTCTCTGTGTCTGCTCCTATCAATaGCTGGATGAAGCCTCTCTGATAATGATGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLAVGLCVCSYQ*LDEASLIMMML Trigger: TAGCATCATCATTATCAGAGAGGCTTCATCCAGCAATTGATAGGAGCAGACACAGAGACCCACAGCTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | GTCTCCGAAGAAACCAGACATTTCCACTTCAGCTCTTaGAATCTGACACACTTGAAGCCTACCTCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSEETRHFHFSS*NLTHLKPTSRY Trigger: ATACCTTGAGGTAGGCTTCAAGTGTGTCAGATTCAAAGAGCTGAAGTGGAAATGTCTGGTTTCTTCGGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | GCAAGGAGTAGCAAGGCGAACCAATACCACACAGTGTaGTTCACTGTTGGGATGTATTTATACCTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARSSKANQYHTV*FTVGMYLYLLQ Trigger: TTGGAGAAGGTATAAATACATCCCAACAGTGAACAACACTGTGTGGTATTGGTTCGCCTTGCTACTCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR TCA 90 bp | CTGCACACTCCAGAATCCTGCTATATACACAAACAATCTTTCATTTGTCTGTTTGAATACCTTCTCCACTaGAGCCCTGGAGGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTPESCYIHKQSFICLFEYLLH*SPGGRC Trigger: ACATCTCCCTCCAGGGCTTCAGTGGAGAAGGTATTC...AAACAGACAAATGAAAGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR TCA 90 bp | CAAGCATCTCTAAAGCTCTCAACACTTATTTTTGAAGAACAATATTTCCCTGCACTTGGGCATTCTGGGTaGTGGCTTCAGACTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QASLKLSTLIFEEQYFPALGHSG*WLQTLE Trigger: CTCCAGAGTCTGAAGCCATCACCCAGAATGCCCAAG...TGCAGGGAAATATTGTTCTTCAAAAATAAGTGTTGAGAGCTTTAGAGATGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAATAGGCACCGAGGTATTTaGTTCAGAAACCCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WRESDLCCQNNSSSVHTNRHRGI*FRNPRN Trigger: ATTTCTGGGGTTTCTGAAGCAAATACCTCGGTGCCT...ATTTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| 3UTR CAA 72 bp | GCAAGGCGAACCAATACCACACAGTGTTGTTCACTGTaGGGATGTATTTATACCTTCTCCAAACATCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ARRTNTTQCCSL*GCIYTFSKHHM Trigger: CATGTGATGTTTGGAGAAGGTATAAATACATCCCAACAGTGAACAACACTGTGTGGTATTGGTTCGCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR TCA 90 bp | CTGCACACTCCAGAATCCTGCTATATACACAAACAATCTTTCATTTGTCTGTTTGAACTGCACTGCAGCTaGATACCTTCTCCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTPESCYIHKQSFICLFELHCS*IPSPLK Trigger: CTTCAGTGGAGAAGGTATTCAGCTGCAGTGCAGTTC...AAACAGACAAATGAAAGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR GCA 90 bp | CTGCACACTCCAGAATCCTGCTATATACACAAACAATCTTTCATTTGTCTGTTTACCAGCCACTGGAACTaGACTGCAGCTGAATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTPESCYIHKQSFICLFTSHWN*TAAEYL Trigger: AAGGTATTCAGCTGCAGTGCAGTTCCAGTGGCTGGT...AAACAGACAAATGAAAGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | CAAGCATCTCTAAAGCTCTCAACACTTATTTTTGAAGAACAATATTTCCCTGCACTTCCAGCTCCCACGTaGCTTCACCAGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QASLKLSTLIFEEQYFPALPAPT*LHQRSC Trigger: ACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAG...TGCAGGGAAATATTGTTCTTCAAAAATAAGTGTTGAGAGCTTTAGAGATGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CCA 90 bp | ATACATGATCAAGGAAGTCGCTATAAACTGTATTCTGAGCCAAAGGTGAACTCAAACACATCTGCAATCTaGATCACGAATTCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHDQGSRYKLYSEPKVNSNTSAI*ITNSFF Trigger: GAAGAAAGAATTCGTGATCCAGATTGCAGATGTGTT...TGAGTTCACCTTTGGCTCAGAATACAGTTTATAGCGACTTCCTTGATCATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS GCA 90 bp | GCTCAGCACGCAGGTCTGCTCCGAGAACCGCTGCGGGTCCCCAGCTaGAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQHAGLLREPLRVPS*NTGHPQAGGHGLAV Trigger: AACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGACCCGCAGCGGTTCTCGGAGCAGACCTGCGTGCTGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS CCA 90 bp | CGCAGGTCTGCTCCGAGAACCGCTGCGGGTCCCCAGCTGCAATACTaGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTTGTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSAPRTAAGPQLQY*APPGGRTRSCRCWR Trigger: TCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGACCCGCAGCGGTTCTCGGAGCAGACCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS GCA 90 bp | AAGGTCCTGTTTCGGAACTGTGCCATCTGCAGGCTGGAGCGCCCCTaGGGCTCCTGGTACAGGTACACCACGTTGGAGACCTGGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KVLFRNCAICRLERP*GSWYRYTTLETWAR Trigger: TCGGGCCCAGGTCTCCAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCGCTCCAGCCTGCAGATGGCACAGTTCCGAAACAGGACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
||
| CDS GCA 90 bp | GGACACGGTCTTGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTaGATATTGCTGGGCTGCTCTCCACTCAGCCTGGCCTTCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: GHGLAVVGDLQARVR*ILLGCSPLSLAFRP Trigger: AGGTCTGAAGGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS GCA 90 bp | GTTGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATTGCTGGGCTaGTCTCCACTCAGCCTGGCCTTCAGACCTTCTCCAGTCTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VVGDLQARVRCILLG*SPLSLAFRPSPVSD Trigger: GTCCGAGACTGGAGAAGGTCTGAAGGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS CCA 90 bp | ATAAGCGACATGGGAACTCCACCGCTTCCCCGACGCGGGCCAAAATaGACTCCTCAGGGCCCAACACCCAGACCTTGTCTGAGTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISDMGTPPLPRRGPK*TPQGPTPRPCLSSP Trigger: AGGTGAACTCAGACAAGGTCTGGGTGTTGGGCCCTGAGGAGTCCATTTTGGCCCGCGTCGGGGAAGCGGTGGAGTTCCCATGTCGCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
||
| CDS CCA 90 bp | TTGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATTGCTaGGCTGCTCTCCACTCAGCCTGGCCTTCAGACCTTCTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLETSRLGCAAYC*AALHSAWPSDLLQS Trigger: AGACTGGAGAAGGTCTGAAGGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS CCA 90 bp | AGGCTTCAAATAAGGTCCTGTTTCGGAACTGTGCCATCTGCAGGCTaGAGCGCCCCTGCGGCTCCTGGTACAGGTACACCACGTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLQIRSCFGTVPSAG*SAPAAPGTGTPRWR Trigger: TCTCCAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCGCTCCAGCCTGCAGATGGCACAGTTCCGAAACAGGACCTTATTTGAAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAAATCGGCAGTGAAGTTGAAGATGTGTGCTATCCCTCGGGCTAGGCAACACATCCGCTGCATATaGCTGGGCTGCTCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LGKSAVKLKMCAIPRARQHIRCI*LGCSPL Trigger: GAGTGGAGAGCAGCCCAGCAATATGCAGCGGATGTG...TTGCCTAGCCCGAGGGATAGCACACATCTTCAACTTCACTGCCGATTTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS TCA 90 bp | GCGGGCCAAAATGGACTCCTCAGGGCCCAACACCCAGACCTTGTCTaGGTTCACCTCCCACAACTGAAGGAAGAGAAGGTAGGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGQNGLLRAQHPDLV*VHLPQLKEEKVGEE Trigger: TTCTTCACCTACCTTCTCTTCCTTCAGTTGTGGGAGGTGAACTCAGACAAGGTCTGGGTGTTGGGCCCTGAGGAGTCCATTTTGGCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
||
| CDS CCA 90 bp | AGATGTGTGGGTCTGAGCCCGATCCTGCTACTTCCAGCTCCCACGTaGCTTCACCAGAGAAGTTGTCAGAAAGAAAGCGGCACCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: RCVGLSPILLLPAPT*LHQRSCQKESGTHI Trigger: GATATGGGTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGCAGGATCGGGCTCAGACCCACACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS TCA 90 bp | CTCCACTCAGCCTGGCCTTCAGACCTTCTCCAGTCAAGCTCTGTCTaGAGTTTCTCTCGGACCTCCTCTCCCTGCTTCACCTGTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHSAWPSDLLQSSSV*SFSRTSSPCFTCFS Trigger: AGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCGAGAGAAACTTCAGACAGAGCTTGACTGGAGAAGGTCTGAAGGCCAGGCTGAGTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CCA 90 bp | TTCTGGGGCAGCAAGGGGTTCTGGATTATACAAGACACATTGCTATaGGCTCCTCCTCGGACAATCACGGATGTCTCCAGACTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWGSKGFWIIQDTLL*APPRTITDVSRLNR Trigger: CCTGTTCAGTCTGGAGACATCCGTGATTGTCCGAGGAGGAGCCCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS CCA 90 bp | GGGACATTCTGGGTAGGAACACATCTGCTACTTCCAGCTCCCACGTaGCTTCACCAGAGAAGTTGTCAGAAAGAAAGCGGCACCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: GTFWVGTHLLLPAPT*LHQRSCQKESGTHI Trigger: GATATGGGTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGCAGATGTGTTCCTACCCAGAATGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153999.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGACCAGCAAGGAGTAGCAAGGCGAACCAATACCACACAGTGTTGTTCACTCCCAACACCCAGACCTaGTCTGAGTTCACCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRPARSSKANQYHTVLFTPNTQT*SEFTSH Trigger: GTGGGAGGTGAACTCAGACAAGGTCTGGGTGTTGGG...AGTGAACAACACTGTGTGGTATTGGTTCGCCTTGCTACTCCTTGCTGGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CCA 90 bp | GCAATCTGGATCACGAATTCTTTCTTCTGGGGCAGCAAGGGGTTCTaGATTATACAAGACACATTGCTATGGGCTCCTCCTCGGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: AIWITNSFFWGSKGF*IIQDTLLWAPPRTI Trigger: GATTGTCCGAGGAGGAGCCCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS-3UTR CAA 90 bp | TTTGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAACTCTCCACTGAACCTTaGGCTTGGGGTACCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FGGNPICVVRITAVQFTQLSTEP*AWGTSH Trigger: GTGGCTGGTACCCCAAGCCAAAGGTTCAGTGGAGAG...TTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAACAGACTGAACAGGCCTaGGGCATTCTGGGTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGGNPICVVRITAVQFTQQTEQA*GILGDG Trigger: GCCATCACCCAGAATGCCCAAGGCCTGTTCAGTCTG...TTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGGAATCCGATCTGTGTTGTCAGAATAACAGCAGTTCAGTTCACACAAGACACGGTCTTGCCGTaGTTGGAGACCTCCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FGGNPICVVRITAVQFTQDTVLP*LETSRL Trigger: TAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTC...TTGTGTGAACTGAACTGCTGTTATTCTGACAACACAGATCGGATTCCCTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CCA 90 bp | CTGGGTAGGAACACATCTGCAATCTGGATCACGAATTCTTTCTTCTaGGGCAGCAAGGGGTTCTGGATTATACAAGACACATTGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRNTSAIWITNSFF*GSKGFWIIQDTLLW Trigger: CCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGATGTGTTCCTACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CCA 90 bp | ATTAGTGTGCTCAGACCTGCAATCTGGATCACGAATTCTTTCTTCTaGGGCAGCAAGGGGTTCTGGATTATACAAGACACATTGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLRPAIWITNSFF*GSKGFWIIQDTLLW Trigger: CCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGGTCTGAGCACACTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS CCA 90 bp | ATGAACTGCTCTATCTCAGTTATTAGTGTGCTCAGACCTGCAATCTaGATCACGAATTCTTTCTTCTGGGGCAGCAAGGGGTTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: MNCSISVISVLRPAI*ITNSFFWGSKGFWI Trigger: AATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGGTCTGAGCACACTAATAACTGAGATAGAGCAGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS-3UTR CAA 90 bp | CTGCACACTCCAGAATCCTGCTATATACACAAACAATCTTTCATTTGTCTGTTTTACAGGTACACCACGTaGGAGACCTGGGCCCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTPESCYIHKQSFICLFYRYTT*ETWARN Trigger: GTTTCGGGCCCAGGTCTCCAACGTGGTGTACCTGTA...AAACAGACAAATGAAAGATTGTTTGTGTATATAGCAGGATTCTGGAGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCAGCAAAACATCTTCTACGTGTCTGCTTCAGCAAAAACATCCTCTGATGCTTCACCAGAGAAGTaGTCAGAAAGAAAGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSQQNIFYVSASAKTSSDASPEK*SERKRH Trigger: GTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGC...ATCAGAGGATGTTTTTGCTGAAGCAGACACGTAGAAGATGTTTTGCTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS-3UTR CAA 90 bp | ATACATGATCAAGGAAGTCGCTATAAACTGTATTCTGAGCCAAAGGTGAACTCACTTCACCTGTTTTTCTaGGAAGCTCCGCAGCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IHDQGSRYKLYSEPKVNSLHLFF*EAPQLV Trigger: TACAAGCTGCGGAGCTTCCAAGAAAAACAGGTGAAG...TGAGTTCACCTTTGGCTCAGAATACAGTTTATAGCGACTTCCTTGATCATGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS-3UTR CAA 90 bp | CAAGCATCTCTAAAGCTCTCAACACTTATTTTTGAAGAACAATATTTCCCTGCATGTAGCCAGTTGTCGTaGTCGTTCTCTTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QASLKLSTLIFEEQYFPACSQLS*SFSSRT Trigger: GGTCCTCGAAGAGAACGACAACGACAACTGGCTACA...TGCAGGGAAATATTGTTCTTCAAAAATAAGTGTTGAGAGCTTTAGAGATGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS GCA 72 bp | GCAGGTCTGCTCCGAGAACCGCTGCGGGTCCCCAGCTaGAATACTGGGCACCCCCAGGCGGGAGGACACGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGLLREPLRVPS*NTGHPQAGGHG Trigger: ACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGACCCGCAGCGGTTCTCGGAGCAGACCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS GCA 72 bp | CTCCGGGGAGGCACGCGTAGCGCCAGTGCCACGCGATaGGGGTCCAGCACGAAGTACTCGCAGCGGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRGGTRSASATR*GSSTKYSQRFH Trigger: GTGGAACCGCTGCGAGTACTTCGTGCTGGACCCGCATCGCGTGGCACTGGCGCTACGCGTGCCTCCCCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CCA 72 bp | GCTCCGAGAACCGCTGCGGGTCCCCAGCTGCAATACTaGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: APRTAAGPQLQY*APPGGRTRSCR Trigger: ACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGACCCGCAGCGGTTCTCGGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CAA 90 bp | TCCCCAGCTGCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTaGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTGTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPAAILGTPRREDTV*PLLETSRLGCAVAG Trigger: TCCTGCCACAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CAA 72 bp | GCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTaGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AILGTPRREDTV*PLLETSRLGCA Trigger: AGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CAA 90 bp | GCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTTGTaGGAGACCTCCAGGCTAGGGTGCGCTGTGGCAGGATCCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AILGTPRREDTVLPL*ETSRLGCAVAGSKV Trigger: GACCTTGGATCCTGCCACAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CAA 90 bp | GCTGCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTaGTTGGAGACCTCCAGGCTAGGGTGCGCTGTGGCAGGATCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAILGTPRREDTVLP*LETSRLGCAVAGSK Trigger: CTTGGATCCTGCCACAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
||
| CDS CAA 90 bp | GCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTTGTaGGAGACCTCCAGGCTAGGGTGCGCTGCATATTGCTGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AILGTPRREDTVLPL*ETSRLGCAAYCWAA Trigger: AGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CAA 90 bp | GCTGCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTTGCCGTaGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATTGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAILGTPRREDTVLP*LETSRLGCAAYCWA Trigger: AGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CAA 90 bp | TCCCCAGCTGCAATACTGGGCACCCCCAGGCGGGAGGACACGGTCTaGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPAAILGTPRREDTV*PLLETSRLGCAAYC Trigger: GCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGTGTCCTCCCGCCTGGGGGTGCCCAGTATTGCAGCTGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS GCA 72 bp | TTTCGGAACTGTGCCATCTGCAGGCTGGAGCGCCCCTaGGGCTCCTGGTACAGGTACACCACGTTGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: FRNCAICRLERP*GSWYRYTTLET Trigger: GGTCTCCAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCGCTCCAGCCTGCAGATGGCACAGTTCCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS GCA 72 bp | AGGGTGCGCTGTGGCAGGATCCAAGGTCACATCCGCTaGATATTGCTGGGCTGCTCTCCACTCAGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RVRCGRIQGHIR*ILLGCSPLSLA Trigger: GGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGGATGTGACCTTGGATCCTGCCACAGCGCACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS GCA 72 bp | CTTGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTaGATATTGCTGGGCTGCTCTCCACTCAGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAVVGDLQARVR*ILLGCSPLSLA Trigger: GGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CAA 72 bp | GAGCGCCCCTGCGGCTCCTGGTACAGGTACACCACGTaGGAGACCTGGGCCCGAAACCAGCGAATTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ERPCGSWYRYTT*ETWARNQRISM Trigger: CATGGAAATTCGCTGGTTTCGGGCCCAGGTCTCCAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS TCA 72 bp | TTCTCCACTGAAGCCCTGGAGGGAGATGTGTGGGTCTaGGCCCGATCCTGCTACTTCCAGCTCCCACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSTEALEGDVWV*ARSCYFQLPRG Trigger: GCCACGTGGGAGCTGGAAGTAGCAGGATCGGGCTCAGACCCACACATCTCCCTCCAGGGCTTCAGTGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS GCA 72 bp | ACGGTCTTGCCGTTGTTGGAGACCTCCAGGCTAGGGTaGGCTGCATATTGCTGGGCTGCTCTCCACTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVLPLLETSRLG*AAYCWAALHSA Trigger: GGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | AGCGCCCCTGCGGCTCCTGGTACAGGTACACCACGTTaGAGACCTGGGCCCGAAACCAGCGAATTTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SAPAAPGTGTPR*RPGPETSEFPC Trigger: ACATGGAAATTCGCTGGTTTCGGGCCCAGGTCTCCAACGTGGTGTACCTGTACCAGGAGCCGCAGGGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS CAA 90 bp | GGTCTTGCCGTTGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATaGCTGGGCTGCTCTCCACTCAGCCTGGCCTTCAGACCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAVVGDLQARVRCI*LGCSPLSLAFRPSP Trigger: TGGAGAAGGTCTGAAGGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAACGGCAAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS GCA 72 bp | TTGTTGGAGACCTCCAGGCTAGGGTGCGCTGCATATTaGTGGGCTGCTCTCCACTCAGCCTGGCCTTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLETSRLGCAAY*WAALHSAWPSD Trigger: GTCTGAAGGCCAGGCTGAGTGGAGAGCAGCCCAGCAATATGCAGCGCACCCTAGCCTGGAGGTCTCCAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | ATAAGGTCCTGTTTCGGAACTGTGCCATCTGCAGGCTaGAGCGCCCCTGCGGCTCCTGGTACAGGTACACCA | + |
|
Preference number: 6 (lower is better) Translates to: IRSCFGTVPSAG*SAPAAPGTGTP Trigger: TGGTGTACCTGTACCAGGAGCCGCAGGGGCGCTCCAGCCTGCAGATGGCACAGTTCCGAAACAGGACCTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS CAA 90 bp | CCCGATCCTGCTACTTCCAGCTCCCACGTGGCTTCACCAGAGAAGTaGTCAGAAAGAAAGCGGCACCCATATCGGCCCTCGTCGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PDPATSSSHVASPEK*SERKRHPYRPSSEG Trigger: TCCCTCCGACGAGGGCCGATATGGGTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGCAGGATCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS CCA 72 bp | CAGGCCTTGGGCATTCTGGGTGATGGCTTCAGACTCTaGAGAAAGGCACTGACCCTGGTGACCTCTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QALGILGDGFRL*RKALTLVTSPL Trigger: CAGTGGAGAGGTCACCAGGGTCAGTGCCTTTCTCCAGAGTCTGAAGCCATCACCCAGAATGCCCAAGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS TCA 72 bp | GCCTGGCCTTCAGACCTTCTCCAGTCAAGCTCTGTCTaGAGTTTCTCTCGGACCTCCTCTCCCTGCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: AWPSDLLQSSSV*SFSRTSSPCFT Trigger: GGTGAAGCAGGGAGAGGAGGTCCGAGAGAAACTTCAGACAGAGCTTGACTGGAGAAGGTCTGAAGGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS CAA 72 bp | GCTACTTCCAGCTCCCACGTGGCTTCACCAGAGAAGTaGTCAGAAAGAAAGCGGCACCCATATCGGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ATSSSHVASPEK*SERKRHPYRPS Trigger: CGAGGGCCGATATGGGTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS CAA 90 bp | AACACATCTGCTACTTCCAGCTCCCACGTGGCTTCACCAGAGAAGTaGTCAGAAAGAAAGCGGCACCCATATCGGCCCTCGTCGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NTSATSSSHVASPEK*SERKRHPYRPSSEG Trigger: TCCCTCCGACGAGGGCCGATATGGGTGCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGCAGATGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153999.3 |
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| CDS TCA 72 bp | AGGATGGGTCCCTGCTCAAGAATGCGACAGCCAGCCTaGTGGCACTGCGTCTTTGCCTGTTCCCAAATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RMGPCSRMRQPA*WHCVFACSQMN Trigger: GTTCATTTGGGAACAGGCAAAGACGCAGTGCCATCAGGCTGGCTGTCGCATTCTTGAGCAGGGACCCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS GCA 72 bp | CCTTCAGACCTTCTCCAGTCTCGGACCTCCTCTCCCTaGTTCACCTGTTTTTCTTGGAAGCTCCGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSDLLQSRTSSP*FTCFSWKLRSL Trigger: CAAGCTGCGGAGCTTCCAAGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCGAGACTGGAGAAGGTCTGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS CCA 72 bp | GGGTTCCCACAAACGCTTTCTTCCAGGGGGACATTCTaGGTAGGAACACATCTGCTACTTCCAGCTCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GFPQTLSSRGTF*VGTHLLLPAPT Trigger: CGTGGGAGCTGGAAGTAGCAGATGTGTTCCTACCCAGAATGTCCCCCTGGAAGAAAGCGTTTGTGGGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153999.3 |
||
| CDS CCA 72 bp | CGGACAATCACGGATGTCTCCAGACTGAACAGGCCTTaGGCATTCTGGGTGATGGCTTCAGACTCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTITDVSRLNRP*AFWVMASDSGE Trigger: TTCTCCAGAGTCTGAAGCCATCACCCAGAATGCCCAAGGCCTGTTCAGTCTGGAGACATCCGTGATTGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS CCA 72 bp | CTTGGACCCCACATCATGATGTCTTGGACCTTAGGGTaGCCAGTTACATCTTCAGTGGGAGCCTCTCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPHIMMSWTLG*PVTSSVGASLA Trigger: GGCTAGAGAGGCTCCCACTGAAGATGTAACTGGCCACCCTAAGGTCCAAGACATCATGATGTGGGGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS CAA 72 bp | TCGGACAATCACGGATGTCTCCAGACTGAACAGGCCTaGGGCATTCTGGGTGATGGCTTCAGACTCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDNHGCLQTEQA*GILGDGFRLWR Trigger: TCTCCAGAGTCTGAAGCCATCACCCAGAATGCCCAAGGCCTGTTCAGTCTGGAGACATCCGTGATTGTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
||
| CDS CAA 90 bp | CCTTCTCCAGTCTCGGACCTCCTCTCCCTGCTTCACCTGTTTTTCTaGGAAGCTCCGCAGCTTGTAAAAATATCGCAGCGCCAGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSPVSDLLSLLHLFF*EAPQLVKISQRQHG Trigger: ACCATGCTGGCGCTGCGATATTTTTACAAGCTGCGGAGCTTCCAAGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCGAGACTGGAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
||
| CDS TCA 72 bp | AATGGACTCCTCAGGGCCCAACACCCAGACCTTGTCTaGGTTCACCTCCCACAACTGAAGGAAGAGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: NGLLRAQHPDLV*VHLPQLKEEKV Trigger: TACCTTCTCTTCCTTCAGTTGTGGGAGGTGAACTCAGACAAGGTCTGGGTGTTGGGCCCTGAGGAGTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS GCA 72 bp | AGCGCCCCTGAGAAAGTGTCGGTGAAGCTGAAGATGTaGGAGCCATCAGACACGTTGAAGAAAGACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAPEKVSVKLKM*EPSDTLKKDSF Trigger: GAAGCTGTCTTTCTTCAACGTGTCTGATGGCTCGCACATCTTCAGCTTCACCGACACTTTCTCAGGGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CCA 72 bp | GCCCGAAACCAGCGAATTTCCATGTGCTCTGCGTCTTaGTATGATGATAAGCGACATGGGAACTCCACCGCT | + |
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Preference number: 6 (lower is better) Translates to: ARNQRISMCSAS*YDDKRHGNSTA Trigger: AGCGGTGGAGTTCCCATGTCGCTTATCATCATACCAAGACGCAGAGCACATGGAAATTCGCTGGTTTCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 ENSMUST00000153999.3 |
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| CDS CCA 72 bp | CAGGGGGACATTCTGGGTAGGAACACATCTGCAATCTaGATCACGAATTCTTTCTTCTGGGGCAGCAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: QGDILGRNTSAI*ITNSFFWGSKG Trigger: CCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGATGTGTTCCTACCCAGAATGTCCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS CCA 72 bp | TGGGTAGGAACACATCTGCTACTTCCAGCTCCCACGTaGCTTCACCAGAGAAGTTGTCAGAAAGAAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: WVGTHLLLPAPT*LHQRSCQKESG Trigger: GCCGCTTTCTTTCTGACAACTTCTCTGGTGAAGCCACGTGGGAGCTGGAAGTAGCAGATGTGTTCCTACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153999.3 |
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| CDS CAA 72 bp | CTCTCGGACCTCCTCTCCCTGCTTCACCTGTTTTTCTaGGAAGCTCCGCAGCTTGTAAAAATATCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSDLLSLLHLFF*EAPQLVKISQR Trigger: GCGCTGCGATATTTTTACAAGCTGCGGAGCTTCCAAGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS CAA 72 bp | GTCTCGGACCTCCTCTCCCTGCTTCACCTGTTTTTCTaGGAAGCTCCGCAGCTTGTAAAAATATCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VSDLLSLLHLFF*EAPQLVKISQR Trigger: GCGCTGCGATATTTTTACAAGCTGCGGAGCTTCCAAGAAAAACAGGTGAAGCAGGGAGAGGAGGTCCGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CAA 90 bp | TCTTTCTTCTGGGGCAGCAAGGGGTTCTGGATTATACAAGACACATaGCTATGGGCTCCTCCTCGGACAATCACGGATGTCTCCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: SFFWGSKGFWIIQDT*LWAPPRTITDVSRL Trigger: CAGTCTGGAGACATCCGTGATTGTCCGAGGAGGAGCCCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CAA 72 bp | GAAGCAAGAACGTCTTGGACCCCACATCATGATGTCTaGGACCTTAGGGTGGCCAGTTACATCTTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EARTSWTPHHDV*DLRVASYIFSG Trigger: CCCACTGAAGATGTAACTGGCCACCCTAAGGTCCAAGACATCATGATGTGGGGTCCAAGACGTTCTTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | AGCAAGGGGTTCTGGATTATACAAGACACATTGCTATaGGCTCCTCCTCGGACAATCACGGATGTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SKGFWIIQDTLL*APPRTITDVSR Trigger: TCTGGAGACATCCGTGATTGTCCGAGGAGGAGCCCATAGCAATGTGTCTTGTATAATCCAGAACCCCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046522.13 ENSMUST00000066531.13 |
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| CDS CCA 72 bp | GGGTTCCCACAAACGCTTTCTTCCAGGGGGACATTCTaGGTAGGAACACATCTGCAATCTGGATCACGAATT | + |
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Preference number: 6 (lower is better) Translates to: GFPQTLSSRGTF*VGTHLQSGSRI Trigger: AATTCGTGATCCAGATTGCAGATGTGTTCCTACCCAGAATGTCCCCCTGGAAGAAAGCGTTTGTGGGAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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| CDS TCA 72 bp | CAGCCTGATGGCACTGCGTCTTTGCCTGTTCCCAAATaGACTGCTCTATCTCAGTTATTAGTGTGCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: QPDGTASLPVPK*TALSQLLVCSD Trigger: GTCTGAGCACACTAATAACTGAGATAGAGCAGTTCATTTGGGAACAGGCAAAGACGCAGTGCCATCAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS GCA 72 bp | AAGAATGCGACAGCCAGCCTGATGGCACTGCGTCTTTaGCTGTTCCCAAATGAACTGCTCTATCTCAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: KNATASLMALRL*LFPNELLYLSY Trigger: ATAACTGAGATAGAGCAGTTCATTTGGGAACAGGCAAAGACGCAGTGCCATCAGGCTGGCTGTCGCATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS TCA 72 bp | TGGCAGAATTCACTACTGTGGAGGAAGGGAAGGCTGTaGATTGAAGATAAAGGATGGGTCCCTGCTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: WQNSLLWRKGRL*IEDKGWVPAQE Trigger: TTCTTGAGCAGGGACCCATCCTTTATCTTCAATTCACAGCCTTCCCTTCCTCCACAGTAGTGAATTCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | CTCAGACCTGCAATCTGGATCACGAATTCTTTCTTCTaGGGCAGCAAGGGGTTCTGGATTATACAAGACACA | + |
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Preference number: 6 (lower is better) Translates to: LRPAIWITNSFF*GSKGFWIIQDT Trigger: TGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGGTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | TCTATCTCAGTTATTAGTGTGCTCAGACCTGCAATCTaGATCACGAATTCTTTCTTCTGGGGCAGCAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SISVISVLRPAI*ITNSFFWGSKG Trigger: CCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGGTCTGAGCACACTAATAACTGAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CAA 72 bp | AGAATTCACTACTGTGGAGGAAGGGAAGGCTGTGAATaGAAGATAAAGGATGGGTCCCTGCTCAAGAATGCG | + |
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Preference number: 6 (lower is better) Translates to: RIHYCGGREGCE*KIKDGSLLKNA Trigger: CGCATTCTTGAGCAGGGACCCATCCTTTATCTTCAATTCACAGCCTTCCCTTCCTCCACAGTAGTGAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066531.13 |
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| CDS CCA 72 bp | AACACATCTGCAATCTGGATCACGAATTCTTTCTTCTaGGGCAGCAAGGGGTTCTGGATTATACAAGACACA | + |
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Preference number: 6 (lower is better) Translates to: NTSAIWITNSFF*GSKGFWIIQDT Trigger: TGTGTCTTGTATAATCCAGAACCCCTTGCTGCCCCAGAAGAAAGAATTCGTGATCCAGATTGCAGATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046522.13 |
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