RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTNL4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058435

Ensembl transcript IDs: ENSMUST00000065841.5

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCTGCGGAACCACCTCAACTCTTCCATGTTCTCCACATTCATGGCTaGAAACACGGAGCAGGGAAGGATGGCTTCCCCACCTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AAEPPQLFHVLHIHG*KHGAGKDGFPTWCS
Trigger: GCTGCACCAGGTGGGGAAGCCATCCTTCCCTGCTCCGTGTTTCCAGCCATGAATGTGGAGAACATGGAAGAGTTGAGGTGGTTCCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp ATCATGGTCAGGGTCACAAGAAAAGCTGGCTTCCAGGGAGAGGCCTaGGGGAAGAAGGGCTCTGGGATGAACATGGCTGTGGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IMVRVTRKAGFQGEA*GKKGSGMNMAVAFS
Trigger: GGAGAAAGCCACAGCCATGTTCATCCCAGAGCCCTTCTTCCCTCAGGCCTCTCCCTGGAAGCCAGCTTTTCTTGTGACCCTGACCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp TCCAAGCTGCCCTGTAAGCTGCTTTCCTTCGATCACGCTCCACCATaGGTGCGCCAGCAGTCCTCAGAGCATCATCCCTTGTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SKLPCKLLSFDHAPP*VRQQSSEHHPLSSV
Trigger: CACTGAAGACAAGGGATGATGCTCTGAGGACTGCTGGCGCACTCATGGTGGAGCGTGATCGAAGGAAAGCAGCTTACAGGGCAGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 90 bp ATCTGCTGCGGAACCACCTCAACTCTTCCATGTTCTCCACATTCATaGCTGGAAACACGGAGCAGGGAAGGATGGCTTCCCCACCTGGTG +
Preference number: 5 (lower is better)
Translates to: ICCGTTSTLPCSPHS*LETRSREGWLPHLV
Trigger: CACCAGGTGGGGAAGCCATCCTTCCCTGCTCCGTGTTTCCAGCCATGAATGTGGAGAACATGGAAGAGTTGAGGTGGTTCCGCAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 90 bp GAACAGAGAGTTCCTGGCATGCTGAAGGAATGGAGAGACTTCCTCTaGAAAAGAATCCACAACACAAGAGCCTGGAACCAGGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: EQRVPGMLKEWRDFL*KRIHNTRAWNQALP
Trigger: GGGGAGGGCCTGGTTCCAGGCTCTTGTGTTGTGGATTCTTTTCCAGAGGAAGTCTCTCCATTCCTTCAGCATGCCAGGAACTCTCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp CTATCTGATGCCTGGACATTTAGGATCCTCACAGCAGCTGTGCCTTaGTGGAACTGGTCCTTCACCAGCAAGGTGCGCTGTGAATACCCA +
Preference number: 5 (lower is better)
Translates to: LSDAWTFRILTAAVP*WNWSFTSKVRCEYP
Trigger: TGGGTATTCACAGCGCACCTTGCTGGTGAAGGACCAGTTCCATCAAGGCACAGCTGCTGTGAGGATCCTAAATGTCCAGGCATCAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp CATGAGTGCGCCAGCAGTCCTCAGAGCATCATCCCTTGTCTTCAGTaGCTCATCCTTCTCACGCTGAAAATTCACCGTTTCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: HECASSPQSIIPCLQ*LILLTLKIHRFLLH
Trigger: GTGCAGCAGGAAACGGTGAATTTTCAGCGTGAGAAGGATGAGTCACTGAAGACAAGGGATGATGCTCTGAGGACTGCTGGCGCACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 90 bp TCCCACTATCTGATGCCTGGACATTTAGGATCCTCACAGCAGCTGTaGCTTGATGGAACTGGTCCTTCACCAGCAAGGTGCGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: SHYLMPGHLGSSQQL*LDGTGPSPARCAVN
Trigger: ATTCACAGCGCACCTTGCTGGTGAAGGACCAGTTCCATCAAGGCACAGCTGCTGTGAGGATCCTAAATGTCCAGGCATCAGATAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp CCCTTCCTTCTGCTCCTCTTGGTCCCGATAGAAAAGTACTGCTTCTaGGAATCTGCTGCGGAACCACCTCAACTCTTCCATGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: PFLLLLLVPIEKYCF*ESAAEPPQLFHVLH
Trigger: GTGGAGAACATGGAAGAGTTGAGGTGGTTCCGCAGCAGATTCTCAGAAGCAGTACTTTTCTATCGGGACCAAGAGGAGCAGAAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp CTCAGAGCATCATCCCTTGTCTTCAGTGACTCATCCTTCTCACGCTaGAAATTCACCGTTTCCTGCTGCACCTTCAGCCTTGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: LRASSLVFSDSSFSR*KFTVSCCTFSLAEC
Trigger: GCATTCTGCAAGGCTGAAGGTGCAGCAGGAAACGGTGAATTTTCAGCGTGAGAAGGATGAGTCACTGAAGACAAGGGATGATGCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 90 bp ATCTTCTGGACCTTTGATGTGCACTTCAGGGACAGAGCCCATTGCTaGCACCTTCAGTTCCAAGATGGCCTCATCATAGAACACTCCTTG +
Preference number: 5 (lower is better)
Translates to: IFWTFDVHFRDRAHC*HLQFQDGLIIEHSL
Trigger: CAAGGAGTGTTCTATGATGAGGCCATCTTGGAACTGAAGGTGGCAGCAATGGGCTCTGTCCCTGAAGTGCACATCAAAGGTCCAGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp GGTCTCTGTGCTGAACAGTCCTTCAGCATCTTTAGTGTGGGTCTCTaGGGAGAATGCTGTGAGATTCTCTCCTCTGGAGTCTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: GLCAEQSFSIFSVGL*GECCEILSSGVFPM
Trigger: CATTGGAAAGACTCCAGAGGAGAGAATCTCACAGCATTCTCCTCAGAGACCCACACTAAAGATGCTGAAGGACTGTTCAGCACAGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp CTTCAGTGTAGTCCACAAACACCCCCACACTCTGCGGAGCTTGCCTaGGAGATAATAAAGCTGTCCCAGTGTCAATATAAGCCAAATATC +
Preference number: 5 (lower is better)
Translates to: LQCSPQTPPHSAELA*EIIKLSQCQYKPNI
Trigger: GATATTTGGCTTATATTGACACTGGGACAGCTTTATTATCTCTCAGGCAAGCTCCGCAGAGTGTGGGGGTGTTTGTGGACTACACTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 90 bp TCCCTCCCTCCCCTCAGATGCGCATGCCATGGATTGGATAATCATTaGAACATTTCCAGACTTAAGCCTGAAGTATGGAAAAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SLPPLRCACHGLDNH*NISRLKPEVWKKSP
Trigger: GGGACTCTTTTTCCATACTTCAGGCTTAAGTCTGGAAATGTTTCAATGATTATCCAATCCATGGCATGCGCATCTGAGGGGAGGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 90 bp CTTCTGTCTTCTCCCTCCCTCCCCTCAGATGCGCATGCCATGGATTaGATAATCATTGAAACATTTCCAGACTTAAGCCTGAAGTATGGA +
Preference number: 5 (lower is better)
Translates to: LLSSPSLPSDAHAMD*IIIETFPDLSLKYG
Trigger: TCCATACTTCAGGCTTAAGTCTGGAAATGTTTCAATGATTATCCAATCCATGGCATGCGCATCTGAGGGGAGGGAGGGAGAAGACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 72 bp CCACATTCATGGCTGGAAACACGGAGCAGGGAAGGATaGCTTCCCCACCTGGTGCAGCCACAATGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PHSWLETRSREG*LPHLVQPQWGL
Trigger: CAGACCCCATTGTGGCTGCACCAGGTGGGGAAGCCATCCTTCCCTGCTCCGTGTTTCCAGCCATGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp ATAGAGCTGGGCCTTCTTCCAAGCTGCCCTGTAAGCTaGTTTCCTTCGATCACGCTCCACCATGAGTGCGCC +
Preference number: 6 (lower is better)
Translates to: IELGLLPSCPVS*FPSITLHHECA
Trigger: GGCGCACTCATGGTGGAGCGTGATCGAAGGAAAGCAGCTTACAGGGCAGCTTGGAAGAAGGCCCAGCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp GAAAGTCCAGGCCTCGAAGTGCTCCTTGCGCCAATCTaGATAGAGCTGGGCCTTCTTCCAAGCTGCCCTGTA +
Preference number: 6 (lower is better)
Translates to: ESPGLEVLLAPI*IELGLLPSCPV
Trigger: TACAGGGCAGCTTGGAAGAAGGCCCAGCTCTATGCAGATTGGCGCAAGGAGCACTTCGAGGCCTGGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp GCCTGGACATTTAGGATCCTCACAGCAGCTGTGCCTTaGTGGAACTGGTCCTTCACCAGCAAGGTGCGCTGT +
Preference number: 6 (lower is better)
Translates to: AWTFRILTAAVP*WNWSFTSKVRC
Trigger: ACAGCGCACCTTGCTGGTGAAGGACCAGTTCCATCAAGGCACAGCTGCTGTGAGGATCCTAAATGTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp GTCTTTCCAATGCACCTGAGGCTCCGGGTACCACCCTaGGGTCATGCACACAACACACACTCCACCATCTTC +
Preference number: 6 (lower is better)
Translates to: VFPMHLRLRVPP*GHAHNTHSTIF
Trigger: GAAGATGGTGGAGTGTGTGTTGTGTGCATGACCTCAGGGTGGTACCCGGAGCCTCAGGTGCATTGGAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp GTGAGATTCTCTCCTCTGGAGTCTTTCCAATGCACCTaGGGCTCCGGGTACCACCCTGAGGTCATGCACACA +
Preference number: 6 (lower is better)
Translates to: VRFSPLESFQCT*GSGYHPEVMHT
Trigger: TGTGTGCATGACCTCAGGGTGGTACCCGGAGCCTCAGGTGCATTGGAAAGACTCCAGAGGAGAGAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp ATCCACAACACAAGAGCCTGGAACCAGGCCCTCCCCTaGAGGACTCAGAGACTCCTCCAAAGGAAGCAAAAC +
Preference number: 6 (lower is better)
Translates to: IHNTRAWNQALP*RTQRLLQRKQN
Trigger: GTTTTGCTTCCTTTGGAGGAGTCTCTGAGTCCTGCAGGGGAGGGCCTGGTTCCAGGCTCTTGTGTTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 72 bp CCACCTCAACTCTTCCATGTTCTCCACATTCATGGCTaGAAACACGGAGCAGGGAAGGATGGCTTCCCCACC +
Preference number: 6 (lower is better)
Translates to: PPQLFHVLHIHG*KHGAGKDGFPT
Trigger: GGTGGGGAAGCCATCCTTCCCTGCTCCGTGTTTCCAGCCATGAATGTGGAGAACATGGAAGAGTTGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 72 bp TGCCTAACACACAGAAGAGGTCATCCAAGCACAGAGTaGAATCCTTCCGGCTCACACTCAGCCTGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: CLTHRRGHPSTE*NPSGSHSACLG
Trigger: CCCCAGACAGGCTGAGTGTGAGCCGGAAGGATTCCACTCTGTGCTTGGATGACCTCTTCTGTGTGTTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp CTGATGCCTGGACATTTAGGATCCTCACAGCAGCTGTaGCTTGATGGAACTGGTCCTTCACCAGCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: LMPGHLGSSQQL*LDGTGPSPARC
Trigger: GCACCTTGCTGGTGAAGGACCAGTTCCATCAAGGCACAGCTGCTGTGAGGATCCTAAATGTCCAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp CCACACCTTCCCTACAGACCCCCAGAGTCCACTTGCTaGTGTCACCATTCCTTAGCTTCACCTCCCAGTAAT +
Preference number: 6 (lower is better)
Translates to: PHLPYRPPESTC*CHHSLASPPSN
Trigger: ATTACTGGGAGGTGAAGCTAAGGAATGGTGACAGCAGCAAGTGGACTCTGGGGGTCTGTAGGGAAGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 72 bp AAGGGCTCTGGGATGAACATGGCTGTGGCTTTCTCCTaGCCCAAGATAGGATTGAAGATGGAGCAGGTCACA +
Preference number: 6 (lower is better)
Translates to: KGSGMNMAVAFS*PKIGLKMEQVT
Trigger: TGTGACCTGCTCCATCTTCAATCCTATCTTGGGCCAGGAGAAAGCCACAGCCATGTTCATCCCAGAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp TGGACCTTTGATGTGCACTTCAGGGACAGAGCCCATTaGTGCCACCTTCAGTTCCAAGATGGCCTCATCATA +
Preference number: 6 (lower is better)
Translates to: WTFDVHFRDRAH*CHLQFQDGLII
Trigger: TATGATGAGGCCATCTTGGAACTGAAGGTGGCAGCAATGGGCTCTGTCCCTGAAGTGCACATCAAAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp GCTGAACAGTCCTTCAGCATCTTTAGTGTGGGTCTCTaGGGAGAATGCTGTGAGATTCTCTCCTCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: AEQSFSIFSVGL*GECCEILSSGV
Trigger: GACTCCAGAGGAGAGAATCTCACAGCATTCTCCTCAGAGACCCACACTAAAGATGCTGAAGGACTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp GCCAGCAGTCCTCAGAGCATCATCCCTTGTCTTCAGTaGCTCATCCTTCTCACGCTGAAAATTCACCGTTTC +
Preference number: 6 (lower is better)
Translates to: ASSPQSIIPCLQ*LILLTLKIHRF
Trigger: GAAACGGTGAATTTTCAGCGTGAGAAGGATGAGTCACTGAAGACAAGGGATGATGCTCTGAGGACTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp ACCTTTGATGTGCACTTCAGGGACAGAGCCCATTGCTaGCACCTTCAGTTCCAAGATGGCCTCATCATAGAA +
Preference number: 6 (lower is better)
Translates to: TFDVHFRDRAHC*HLQFQDGLIIE
Trigger: TTCTATGATGAGGCCATCTTGGAACTGAAGGTGGCAGCAATGGGCTCTGTCCCTGAAGTGCACATCAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp CTGAAAATTCACCGTTTCCTGCTGCACCTTCAGCCTTaGAGAATGCTCCCTTCTGAGAAGATAGCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: LKIHRFLLHLQP*RMLPSEKIACP
Trigger: GGGACAAGCTATCTTCTCAGAAGGGAGCATTCTGCAAGGCTGAAGGTGCAGCAGGAAACGGTGAATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp AGTCCACAAACACCCCCACACTCTGCGGAGCTTGCCTaGGAGATAATAAAGCTGTCCCAGTGTCAATATAAG +
Preference number: 6 (lower is better)
Translates to: SPQTPPHSAELA*EIIKLSQCQYK
Trigger: CTTATATTGACACTGGGACAGCTTTATTATCTCTCAGGCAAGCTCCGCAGAGTGTGGGGGTGTTTGTGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp GGTCCCGATAGAAAAGTACTGCTTCTGAGAATCTGCTaGGGAACCACCTCAACTCTTCCATGTTCTCCACAT +
Preference number: 6 (lower is better)
Translates to: GPDRKVLLLRIC*GTTSTLPCSPH
Trigger: ATGTGGAGAACATGGAAGAGTTGAGGTGGTTCCGCAGCAGATTCTCAGAAGCAGTACTTTTCTATCGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS GCA 72 bp CTTGGTCCCGATAGAAAAGTACTGCTTCTGAGAATCTaGTGCGGAACCACCTCAACTCTTCCATGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LGPDRKVLLLRI*CGTTSTLPCSP
Trigger: TGGAGAACATGGAAGAGTTGAGGTGGTTCCGCAGCAGATTCTCAGAAGCAGTACTTTTCTATCGGGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS CCA 72 bp CTATGGGAACAGAGAGTTCCTGGCATGCTGAAGGAATaGAGAGACTTCCTCTGGAAAAGAATCCACAACACA +
Preference number: 6 (lower is better)
Translates to: LWEQRVPGMLKE*RDFLWKRIHNT
Trigger: TGTGTTGTGGATTCTTTTCCAGAGGAAGTCTCTCCATTCCTTCAGCATGCCAGGAACTCTCTGTTCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5
CDS TCA 72 bp CCCCTCAGATGCGCATGCCATGGATTGGATAATCATTaGAACATTTCCAGACTTAAGCCTGAAGTATGGAAA +
Preference number: 6 (lower is better)
Translates to: PLRCACHGLDNH*NISRLKPEVWK
Trigger: TTTCCATACTTCAGGCTTAAGTCTGGAAATGTTTCAATGATTATCCAATCCATGGCATGCGCATCTGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065841.5