Pregenerated sensors for BTNL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024340Ensembl transcript IDs: ENSMUST00000025198.15, ENSMUST00000178562.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCCTTTCTCTTGAGGACGGAGGAAAGAAACCCTCTCCTCCCACCTaGTTTGTCCCTCTAGTGCTACTGGATTGGGCATTTCTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: VLSLEDGGKKPSPPT*FVPLVLLDWAFLEK Trigger: TTTTTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGAGGGTTTCTTTCCTCCGTCCTCAAGAGAAAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR GCA 90 bp | GTTATGACCTGCCATATGGGTGCTAGGAATGAAACTCAGGTCCTCTaGAAGAACAGCAAGTGCTTTTACCCCCTTAGTTATTTCTACAAT | + |
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Preference number: 1 (lower is better) Translates to: VMTCHMGARNETQVL*KNSKCFYPLSYFYN Trigger: ATTGTAGAAATAACTAAGGGGGTAAAAGCACTTGCTGTTCTTGCAGAGGACCTGAGTTTCATTCCTAGCACCCATATGGCAGGTCATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR TCA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGCCCCCACCCCCGGTCTaGTTTGTAGTGCAAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKPPPPV*FVVQVS Trigger: TGACACTTGCACTACAAATCAGACCGGGGGTGGGGG...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATTGGGCATTTCTAGAACATCCAGGACTCAGATaGGTGACATTTCTCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPPTCFVPLVLLDWAFLEHPGLR*VTFLCR Trigger: CCTGCAGAGAAATGTCACTCATCTGAGTCCTGGATG...TTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGTGATGAGATAAAGCAAAGGGAGAGAAGATaGCATCACTGTGAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AGLSSSILTVGPEGDEIKQRERR*HHCERG Trigger: CCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTTG...CTTTATCTCATCACCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATTGGGCATTTCTAGAACAGGACTCAGATGAGTaGCATTTCTCTGCAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SPPTCFVPLVLLDWAFLEQDSDE*HFSAGL Trigger: TAGACCTGCAGAGAAATGTCACTCATCTGAGTCCTG...TTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGTAACCATGAATCACAGTCCCTCTCCTCCCACCTaGTTTGTCCCTCTAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PGLICSASVKSFVTMNHSPSPPT*FVPLVL Trigger: TAGCACTAGAGGGACAAAGCAGGTGGGAGGAGAGGG...ACTGTGATTCATGGTTACAAAAGACTTGACACTTGCACTACAAATCAGACCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTCAGGACTCAGATGAGTaGCATTTCTCTGCAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: FYNSPTPGLICSASVKSFQDSDE*HFSAGL Trigger: TAGACCTGCAGAGAAATGTCACTCATCTGAGTCCTG...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTAAGATGCCATCACTGTaGGAGAGGGATCAAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: FYNSPTPGLICSASVKSFKMPSL*ERDQDY Trigger: ATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTT...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGCACTCCTATGTCAGTaGAGCTTATTGAGGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: FYNSPTPGLICSASVKSFALLCQ*SLLRGK Trigger: TTTTCCCCTCAATAAGCTGCACTGACATAGGAGTGC...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTTCCATGAAGAACCTTTaGAGAGCAGCAAGTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: FYNSPTPGLICSASVKSFSMKNL*RAASES Trigger: GCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGA...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTTCCATGAAGAACCTTTaGAGAGCAGCAAGTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KGREDAITVREGSRLLWVSMKNL*RAASES Trigger: GCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGA...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGTAACCATGAATCACAGTGCACTCCTATGTCAGTaGAGCTTATTGAGGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PGLICSASVKSFVTMNHSALLCQ*SLLRGK Trigger: TTTTCCCCTCAATAAGCTGCACTGACATAGGAGTGC...ACTGTGATTCATGGTTACAAAAGACTTGACACTTGCACTACAAATCAGACCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR TCA 72 bp | TGGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCGTaGTGGTTGCATCAGGTACGGACAGGGTCCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: WVGSGRGAPNCA*WLHQVRTGSMK Trigger: CTTCATGGACCCTGTCCGTACCTGATGCAACCATCACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCAGGAAATGGGGTGCGTaGGGCTTGCGGGGTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: TVREGSRLLWVGSGRGAPRKWGA*GLRGAF Trigger: AAATGCACCCCGCAAGCCCAACGCACCCCATTTCCT...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR CCA 72 bp | GATGCCATCACTGTGAGAGAGGGATCAAGACTATTATaGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCG | + |
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Preference number: 3 (lower is better) Translates to: DAITVREGSRLL*VGSGRGAPNCA Trigger: CGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR CCA 72 bp | CATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTaGCTCAGGTCGAGGTGCTCCCAACTGTGCGTGATG | + |
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Preference number: 3 (lower is better) Translates to: HHCERGIKTIMG*LRSRCSQLCVM Trigger: CATCACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCTGTCAGTGCAGCTTATaGAGGGGAAAAGATGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TVREGSRLLWVGSGRGAPCQCSL*RGKDGR Trigger: CCTCCCATCTTTTCCCCTCAATAAGCTGCACTGACA...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR TCA 72 bp | TGTGCCTGGTGCCCTCAGAGGCTAGAAAAGGGCATCTaGCCCCCTAGAACTGGAGTTATAGATGGTTATGAC | + |
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Preference number: 3 (lower is better) Translates to: CAWCPQRLEKGI*PPRTGVIDGYD Trigger: GTCATAACCATCTATAACTCCAGTTCTAGGGGGTCAGATGCCCTTTTCTAGCCTCTGAGGGCACCAGGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATTGGGCATTTCTAGAATGTCAGTGCAGCTTATaGAGGGGAAAAGATGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SPPTCFVPLVLLDWAFLECQCSL*RGKDGR Trigger: CCTCCCATCTTTTCCCCTCAATAAGCTGCACTGACA...TTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CAA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGGGGATAGTCCCTAGATaGAGGGATAGCAGAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRGIVPR*RDSRKR Trigger: TCTCTTTCTGCTATCCCTCAATCTAGGGACTATCCC...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR GCA 72 bp | TGTTTTGCCTACATCTATGTCTGTGTACCACATGTGTaGCTGGTGCCCTCAGAGGCTAGAAAAGGGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: CFAYIYVCVPHV*LVPSEARKGHL Trigger: CAGATGCCCTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGTAGGCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR CCA 72 bp | TTGCATCAGGTACGGACAGGGTCCATGAAGAACCTTTaGAGAGCAGCAAGTGAAAGCACTCCTATGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LHQVRTGSMKNL*RAASESTPMSV Trigger: CACTGACATAGGAGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR CCA 72 bp | CCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATTaGGCATTTCTAGAAAAACCCATCCAGGACTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: PPTCFVPLVLLD*AFLEKPIQDSD Trigger: ATCTGAGTCCTGGATGGGTTTTTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR-3UTR CAA 90 bp | CCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGTAACCATGAATCACAGTAGGAAATGGGGTGCGTaGGGCTTGCGGGGTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: PGLICSASVKSFVTMNHSRKWGA*GLRGAF Trigger: AAATGCACCCCGCAAGCCCAACGCACCCCATTTCCT...ACTGTGATTCATGGTTACAAAAGACTTGACACTTGCACTACAAATCAGACCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR GCA 72 bp | TTTGGAGAGCAGCAAGTGAAAGCACTCCTATGTCAGTaGAGCTTATTGAGGGGAAAAGATGGGAGGAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: FGEQQVKALLCQ*SLLRGKDGRRD Trigger: ATCCCTCCTCCCATCTTTTCCCCTCAATAAGCTGCACTGACATAGGAGTGCTTTCACTTGCTGCTCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR GCA 72 bp | TGCCATATGGGTGCTAGGAATGAAACTCAGGTCCTCTaGAAGAACAGCAAGTGCTTTTACCCCCTTAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: CHMGARNETQVL*KNSKCFYPLSY Trigger: ATAACTAAGGGGGTAAAAGCACTTGCTGTTCTTGCAGAGGACCTGAGTTTCATTCCTAGCACCCATATGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| 3UTR TCA 72 bp | GCATTTCTAGAAAAACCCATCCAGGACTCAGATGAGTaGCATTTCTCTGCAGGTCTAAGTTCTTCCATCCTC | + |
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Preference number: 3 (lower is better) Translates to: AFLEKPIQDSDE*HFSAGLSSSIL Trigger: GAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCACTCATCTGAGTCCTGGATGGGTTTTTCTAGAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTTAGTCCTTTCTCTTGAGGACGGAGGAAAGAAACCCTCTCCTCCCACCCCTCACCTCCATGTGTaGCGTGGTCCTCTTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SQLVLSLEDGGKKPSPPTPHLHV*RGPLGE Trigger: CTCCCCAAGAGGACCACGGCACACATGGAGGTGAGG...GGTGGGAGGAGAGGGTTTCTTTCCTCCGTCCTCAAGAGAAAGGACTAACTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCGTGCCGTGGTCCTCTTaGGGAGGAGCTGACACGTTA | + |
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Preference number: 4 (lower is better) Translates to: TVREGSRLLWVGSGRGAPVPWSS*GGADTL Trigger: TAACGTGTCAGCTCCTCCCCAAGAGGACCACGGCAC...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | AGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCGTGAAGCCAGTTCGGTCTaGAGCCTCTCTGACAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: RDQDYYGLAQVEVLPTVREASSV*SLSDRA Trigger: CGCTCTGTCAGAGAGGCTCCAGACCGAACTGGCTTC...ACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025198.15 |
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| CDS-3UTR TCA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGCTCTTGGGGAGGAGCTaGCACGTTAGCAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRLLGRS*HVSRAS Trigger: AGATGCCCTGCTAACGTGTCAGCTCCTCCCCAAGAG...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGCAGATGCCTTCCCAGTaGACCTCAGGCTCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRQMPSQ*TSGSGN Trigger: GTTCCCTGAGCCTGAGGTGCACTGGGAAGGCATCTG...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | CAGGTACGGACAGGGTCCATGAAGAACCTTTGGAGAGCAGCAAGTGAAAGCACTCACGTGGGTGCCATTTaGATACACGTGGACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVRTGSMKNLWRAASESTHVGAI*IHVDCR Trigger: CCTGCAGTCCACGTGTATGCAAATGGCACCCACGTG...AGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGCACGTGGGTGCCATTTaGATACACGTGGACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKHVGAI*IHVDCR Trigger: CCTGCAGTCCACGTGTATGCAAATGGCACCCACGTG...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGCCGGTACATAATCACTaGCATGTCAGGGTCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKPVHNH*HVRVGA Trigger: CGCTCCGACCCTGACATGCCAGTGATTATGTACCGG...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATTGGGCATTTCTAGAACCGGTACATAATCACTaGCATGTCAGGGTCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SPPTCFVPLVLLDWAFLEPVHNH*HVRVGA Trigger: CGCTCCGACCCTGACATGCCAGTGATTATGTACCGG...TTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGCCTAGAGCAGCCACTTaGAGTAGCACGCTTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRPRAAT*SSTLVS Trigger: AGAGACAAGCGTGCTACTCCAAGTGGCTGCTCTAGG...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | TCACAGTTAGTCCTTTCTCTTGAGGACGGAGGAAAGAAACCCTCTCCTCCCACCCGACTTGAACAGGGCTaGGCTGGGAATGTCCGATTA | + |
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Preference number: 4 (lower is better) Translates to: SQLVLSLEDGGKKPSPPTRLEQG*AGNVRL Trigger: TAATCGGACATTCCCAGCCCAGCCCTGTTCAAGTCG...GGTGGGAGGAGAGGGTTTCTTTCCTCCGTCCTCAAGAGAAAGGACTAACTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | CAGGTACGGACAGGGTCCATGAAGAACCTTTGGAGAGCAGCAAGTGAAAGCACTCGACTTGAACAGGGCTaGGCTGGGAATGTCCGATTA | + |
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Preference number: 4 (lower is better) Translates to: QVRTGSMKNLWRAASESTRLEQG*AGNVRL Trigger: TAATCGGACATTCCCAGCCCAGCCCTGTTCAAGTCG...AGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGAGAAGTGTCTCCACCTaGAACAGCTCCTGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKRSVST*NSSWLP Trigger: AGGGAGCCAGGAGCTGTTCCAGGTGGAGACACTTCT...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR TCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTCTCTTGGGGAGGAGCTaGCACGTTAGCAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: FYNSPTPGLICSASVKSFLLGRS*HVSRAS Trigger: AGATGCCCTGCTAACGTGTCAGCTCCTCCCCAAGAG...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR TCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCCCAGAGGGAGGCTaGTGGAGCAGGTCACATTCA | + |
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Preference number: 4 (lower is better) Translates to: KGREDAITVREGSRLLWVGPEGG*WSRSHS Trigger: TGAATGTGACCTGCTCCATCAGCCTCCCTCTGGGCC...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTTCTCTGTCCCTCCACTaGACATGGGGCCGTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KGREDAITVREGSRLLWVSLSLH*TWGRGN Trigger: GTTCCCACGGCCCCATGTGCAGTGGAGGGACAGAGA...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGCCGAGTCCCTCCACATaGATATTTGGGGAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRPSPST*IFGEDP Trigger: AGGATCTTCCCCAAATATCCATGTGGAGGGACTCGG...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | CAGGTACGGACAGGGTCCATGAAGAACCTTTGGAGAGCAGCAAGTGAAAGCACTCCGAGTCCCTCCACATaGATATTTGGGGAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVRTGSMKNLWRAASESTPSPST*IFGEDP Trigger: AGGATCTTCCCCAAATATCCATGTGGAGGGACTCGG...AGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTCGGGCTGTTTTCTCCTaGCCCAGAGGGAGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGREDAITVREGSRLLWVRAVFS*PRGRLM Trigger: CATCAGCCTCCCTCTGGGCCAGGAGAAAACAGCCCG...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | AGACAAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGCGGGCTGTTTTCTCCTaGCCCAGAGGGAGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQRERRCHHCERGIKTIMRAVFS*PRGRLM Trigger: CATCAGCCTCCCTCTGGGCCAGGAGAAAACAGCCCG...CATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR TCA 90 bp | AGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCGTTCTTCACCTGGCACATaGTTCTCAGAGAAACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RDQDYYGLAQVEVLPTVRSSPGT*FSEKLI Trigger: GATGAGTTTCTCTGAGAATCATGTGCCAGGTGAAGA...ACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | AGACAAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGTGCCGTGGTCCTCTTaGGGAGGAGCTGACACGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQRERRCHHCERGIKTIMVPWSS*GGADTL Trigger: TAACGTGTCAGCTCCTCCCCAAGAGGACCACGGCAC...CATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTTCTCTGACAGAGCGATaGTGGCCTCCTGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGREDAITVREGSRLLWVSLTER*WPPGSL Trigger: GAGAGACCCAGGAGGCCACCATCGCTCTGTCAGAGA...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025198.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCCTTCATCCGAAGTTCTaGCATTGTGAATTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSRLLWVGSGRGAPLHPKF*HCEFAG Trigger: CCCTGCAAATTCACAATGCCAGAACTTCGGATGAAG...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| 3UTR CAA 72 bp | TCCTCCCACCTGCTTTGTCCCTCTAGTGCTACTGGATaGGGCATTTCTAGAAAAACCCATCCAGGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHLLCPSSATG*GISRKTHPGLR Trigger: TCTGAGTCCTGGATGGGTTTTTCTAGAAATGCCCAATCCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCGAAGTTCTGGCATTGTaGATTTGCAGGGTCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVREGSRLLWVGSGRGAPEVLAL*ICRVSF Trigger: AAAACTGACCCTGCAAATTCACAATGCCAGAACTTC...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGTAACCATGAATCACAGTCAGATGCCTTCCCAGTaGACCTCAGGCTCAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGLICSASVKSFVTMNHSQMPSQ*TSGSGN Trigger: GTTCCCTGAGCCTGAGGTGCACTGGGAAGGCATCTG...ACTGTGATTCATGGTTACAAAAGACTTGACACTTGCACTACAAATCAGACCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGAGAAGTGTCTCCACCTaGAACAGCTCCTGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRERRCHHCERGIKTIMRSVST*NSSWLP Trigger: AGGGAGCCAGGAGCTGTTCCAGGTGGAGACACTTCT...CATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGTGATGAGATAAAGGGAAGTCGCCGCCTGTaGTTTTCGTCATTCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSSILTVGPEGDEIKGSRRL*FSSFLL Trigger: TAACAAGAATGACGAAAACCACAGGCGGCGACTTCC...CTTTATCTCATCACCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCAAGTCTTTTGTAACCATGAATCACAGTTAGTCCTTTCTCTTGAGGACCCTCACCTCCATGTGTaGCGTGGTCCTCTTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCQVFCNHESQLVLSLEDPHLHV*RGPLGE Trigger: CTCCCCAAGAGGACCACGGCACACATGGAGGTGAGG...GTCCTCAAGAGAAAGGACTAACTGTGATTCATGGTTACAAAAGACTTGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTACTTTTCTCCCCAGATaGCTTCCCAGTGCACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGREDAITVREGSRLLWVTFLPR*LPSAPQ Trigger: CTGAGGTGCACTGGGAAGGCATCTGGGGAGAAAAGT...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CCA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGCTTCATCCGAAGTTCTaGCATTGTGAATTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKLHPKF*HCEFAG Trigger: CCCTGCAAATTCACAATGCCAGAACTTCGGATGAAG...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCAAGTCTTTTGTAACCATGAATCACAGTTAGTCCTTTCTCTTGAGGACTTGCTGACAGAGCGATaGTGGCCTCCTGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCQVFCNHESQLVLSLEDLLTER*WPPGSL Trigger: GAGAGACCCAGGAGGCCACCATCGCTCTGTCAGCAA...GTCCTCAAGAGAAAGGACTAACTGTGATTCATGGTTACAAAAGACTTGACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178562.2 |
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| CDS-3UTR TCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTTCTTCACCTGGCACATaGTTCTCAGAGAAACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FYNSPTPGLICSASVKSFSSPGT*FSEKLI Trigger: GATGAGTTTCTCTGAGAATCATGTGCCAGGTGAAGA...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR TCA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGTTCTTGTTATTTTCCTaGTTGCTGCTGTGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRFLLFS*LLLCVC Trigger: ACAAACACACAGCAGCAATCAGGAAAATAACAAGAA...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTACGGACAGGGTCCATGAAGAACCTTTGGAGAGCAGCAAGTGAAAGCACTTTCTTGTTATTTTCCTaGTTGCTGCTGTGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVRTGSMKNLWRAASESTFLLFS*LLLCVC Trigger: ACAAACACACAGCAGCAATCAGGAAAATAACAAGAA...AGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTGTAACCATGAATCACAGTTTGTATTCTACCATCTaGTCTCCAGCCACGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLICSASVKSFVTMNHSLYSTI*SPATWV Trigger: CACCCACGTGGCTGGAGAGCAGATGGTAGAATACAA...ACTGTGATTCATGGTTACAAAAGACTTGACACTTGCACTACAAATCAGACCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | CAGGTACGGACAGGGTCCATGAAGAACCTTTGGAGAGCAGCAAGTGAAAGCACTTGTTATTTTCCTGATTaGTGCTGTGTGTTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVRTGSMKNLWRAASESTCYFPD*CCVFVH Trigger: ATGAACAAACACACAGCAGCAATCAGGAAAATAACA...AGTGCTTTCACTTGCTGCTCTCCAAAGGTTCTTCATGGACCCTGTCCGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCAAGTCTTTTGTAACCATGAATCACAGTTAGTCCTTTCTCTTGAGGACTTGTATTCTACCATCTaGTCTCCAGCCACGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCQVFCNHESQLVLSLEDLYSTI*SPATWV Trigger: CACCCACGTGGCTGGAGAGCAGATGGTAGAATACAA...GTCCTCAAGAGAAAGGACTAACTGTGATTCATGGTTACAAAAGACTTGACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR GCA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTTGTTATTTTCCTGATTaGTGCTGTGTGTTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYNSPTPGLICSASVKSFCYFPD*CCVFVH Trigger: ATGAACAAACACACAGCAGCAATCAGGAAAATAACA...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 90 bp | TGCCTTCCCAGTGCACCTCAGGCTCAGGGAACCAGCCTCGGGACGTaGATACAAGCTGGACCTCTCCTTCTCCGAGTCCCTCCACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLPSAPQAQGTSLGT*IQAGPLLLRVPPHG Trigger: TCCATGTGGAGGGACTCGGAGAAGGAGAGGTCCAGCTTGTATGCACGTCCCGAGGCTGGTTCCCTGAGCCTGAGGTGCACTGGGAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | TCCCCCTCCTGGAAGCGGCACCAGTACTGGCCATCGTCACTTGGCTaGACCTGGCGAATCTTCAGAGCCACACTGCCCTCTTCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSWKRHQYWPSSLG*TWRIFRATLPSSVL Trigger: CAGCACTGAAGAGGGCAGTGTGGCTCTGAAGATTCGCCAGGTCCAGCCAAGTGACGATGGCCAGTACTGGTGCCGCTTCCAGGAGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | TCCTGGAAGCGGCACCAGTACTGGCCATCGTCACTTGGCTGGACCTaGCGAATCTTCAGAGCCACACTGCCCTCTTCAGTGCTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWKRHQYWPSSLGWT*RIFRATLPSSVLSS Trigger: GGAGGACAGCACTGAAGAGGGCAGTGTGGCTCTGAAGATTCGCCAGGTCCAGCCAAGTGACGATGGCCAGTACTGGTGCCGCTTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | TGCACCTCAGGCTCAGGGAACCAGCCTCGGGACGTGCATACAAGCTaGACCTCTCCTTCTCCGAGTCCCTCCACATGGATATTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTSGSGNQPRDVHTS*TSPSPSPSTWIFGE Trigger: TTCCCCAAATATCCATGTGGAGGGACTCGGAGAAGGAGAGGTCCAGCTTGTATGCACGTCCCGAGGCTGGTTCCCTGAGCCTGAGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 90 bp | GCCAAGATTGGGAGGTTAGGACCGACCACTCTGAAGTCATCTGGGTaGTTTATAGTCAGCAGGACGAAGAGGAAGGAGGCAGCCACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKIGRLGPTTLKSSG*FIVSRTKRKEAATP Trigger: TGGCGTGGCTGCCTCCTTCCTCTTCGTCCTGCTGACTATAAAGCACCCAGATGACTTCAGAGTGGTCGGTCCTAACCTCCCAATCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | GAGGCAGCACCACAACAGGCAGGGTCATCCATAGCAAAGCTATCTTaGAGTCTGAGAGAGGGAAACGGGCTGTTTTCTCCTGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EAAPQQAGSSIAKLS*SLREGNGLFSPGPE Trigger: CTCTGGGCCAGGAGAAAACAGCCCGTTTCCCTCTCTCAGACTCCAAGATAGCTTTGCTATGGATGACCCTGCCTGTTGTGGTGCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | AGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCGTCAGCTCCTGGCTCCCTaGCTGAAAGGCCTCGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDQDYYGLAQVEVLPTVRQLLAP*LKGLGK Trigger: TTTTCCGAGGCCTTTCAGCAAGGGAGCCAGGAGCTG...ACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | GACGTGCATACAAGCTGGACCTCTCCTTCTCCGAGTCCCTCCACATaGATATTTGGGGAAGATCCTAGAGCAGCCACTTGGAGTAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DVHTSWTSPSPSPST*IFGEDPRAATWSST Trigger: CGTGCTACTCCAAGTGGCTGCTCTAGGATCTTCCCCAAATATCCATGTGGAGGGACTCGGAGAAGGAGAGGTCCAGCTTGTATGCACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 90 bp | AAAGCTATCTTGGAGTCTGAGAGAGGGAAACGGGCTGTTTTCTCCTaGCCCAGAGGGAGGCTGATGGAGCAGGTCACATTCACCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAILESERGKRAVFS*PRGRLMEQVTFTME Trigger: CTCCATGGTGAATGTGACCTGCTCCATCAGCCTCCCTCTGGGCCAGGAGAAAACAGCCCGTTTCCCTCTCTCAGACTCCAAGATAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | TCACAGTTAGTCCTTTCTCTTGAGGACGGAGGAAAGAAACCCTCTCCTCCCACCCTTGGAGTAGCACGCTaGTCTCTCTCCAGTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLVLSLEDGGKKPSPPTLGVAR*SLSSSP Trigger: GGGACTACTGGAGAGAGACAAGCGTGCTACTCCAAG...GGTGGGAGGAGAGGGTTTCTTTCCTCCGTCCTCAAGAGAAAGGACTAACTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | ACATCTATGTCTGTGTACCACATGTGTGCCTGGTGCCCTCAGAGGCTAGAAAAGCCACGTGGGTGCCATTaGCATACACGTGGACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSMSVYHMCAWCPQRLEKPRGCH*HTRGLQ Trigger: CTGCAGTCCACGTGTATGCAAATGGCACCCACGTGG...CTTTTCTAGCCTCTGAGGGCACCAGGCACACATGTGGTACACAGACATAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGTGATGAGATAAAGCAGCTCCTGGCTCCCTaGCTGAAAGGCCTCGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSSILTVGPEGDEIKQLLAP*LKGLGK Trigger: TTTTCCGAGGCCTTTCAGCAAGGGAGCCAGGAGCTG...CTTTATCTCATCACCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS TCA 90 bp | CCAAAAAGGCACCGGTACTGCCCTTCATCCGAAGTTCTGGCATTGTaGATTTGCAGGGTCAGTTTTCCCTCGTGGATGGCATCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PKRHRYCPSSEVLAL*ICRVSFPSWMASVT Trigger: GGTGACTGATGCCATCCACGAGGGAAAACTGACCCTGCAAATTCACAATGCCAGAACTTCGGATGAAGGGCAGTACCGGTGCCTTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS CCA 90 bp | TTTAGCCAAGATTGGGAGGTTAGGACCGACCACTCTGAAGTCATCTaGGTGCTTTATAGTCAGCAGGACGAAGAGGAAGGAGGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSQDWEVRTDHSEVI*VLYSQQDEEEGGSH Trigger: GTGGCTGCCTCCTTCCTCTTCGTCCTGCTGACTATAAAGCACCCAGATGACTTCAGAGTGGTCGGTCCTAACCTCCCAATCTTGGCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTGAGAGAGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCCCTCCACATGGATATTaGGGGAAGATCCTAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVREGSRLLWVGSGRGAPPPHGY*GKILEQ Trigger: CTGCTCTAGGATCTTCCCCAAATATCCATGTGGAGG...GGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCTCTCTCACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CAA 90 bp | AGGGATCAAGACTATTATGGGTTGGCTCAGGTCGAGGTGCTCCCAACTGTGCGTCCTCCACATGGATATTaGGGGAAGATCCTAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDQDYYGLAQVEVLPTVRPPHGY*GKILEQ Trigger: CTGCTCTAGGATCTTCCCCAAATATCCATGTGGAGG...ACGCACAGTTGGGAGCACCTCGACCTGAGCCAACCCATAATAGTCTTGATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGTGATGAGATAAAGATTGCTGCTGTGTGTTaGTTCATTGGTCCGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSSILTVGPEGDEIKIAAVC*FIGPPP Trigger: TGGCGGCGGACCAATGAACAAACACACAGCAGCAAT...CTTTATCTCATCACCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS TCA 90 bp | GAAGGAAGTCGCCGCCTGTGGTTTTCGTCATTCTTGTTATTTTCCTaGTTGCTGCTGTGTGTTTGTTCATTGGTCCGCCGCCACCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGSRRLWFSSFLLFS*LLLCVCSLVRRHRF Trigger: GAAACGGTGGCGGCGGACCAATGAACAAACACACAGCAGCAATCAGGAAAATAACAAGAATGACGAAAACCACAGGCGGCGACTTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS GCA 90 bp | GAAGTCGCCGCCTGTGGTTTTCGTCATTCTTGTTATTTTCCTGATTaGTGCTGTGTGTTTGTTCATTGGTCCGCCGCCACCGTTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: EVAACGFRHSCYFPD*CCVFVHWSAATVSP Trigger: AGGTGAAACGGTGGCGGCGGACCAATGAACAAACACACAGCAGCAATCAGGAAAATAACAAGAATGACGAAAACCACAGGCGGCGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
||
| CDS-3UTR CAA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTCTTGGAGTAGCACGCTaGTCTCTCTCCAGTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FYNSPTPGLICSASVKSFLGVAR*SLSSSP Trigger: GGGACTACTGGAGAGAGACAAGCGTGCTACTCCAAG...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | AGACAAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGCCACGTGGGTGCCATTaGCATACACGTGGACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RQRERRCHHCERGIKTIMPRGCH*HTRGLQ Trigger: CTGCAGTCCACGTGTATGCAAATGGCACCCACGTGG...CATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGAGAGAAGATGCCATCACTGTGAGAGAGGGATCAAGACTATTATGGGTTTATGTTCTCTCCGACTaGAACAGGGCTGGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KGREDAITVREGSRLLWVYVLSD*NRAGLG Trigger: TCCCAGCCCAGCCCTGTTCAAGTCGGAGAGAACATA...AACCCATAATAGTCTTGATCCCTCTCTCACAGTGATGGCATCTTCTCTCCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | TTCTACAATTCCCCCACCCCCGGTCTGATTTGTAGTGCAAGTGTCAAGTCTTTTATTGCTGCTGTGTGTTaGTTCATTGGTCCGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: FYNSPTPGLICSASVKSFIAAVC*FIGPPP Trigger: TGGCGGCGGACCAATGAACAAACACACAGCAGCAAT...AAAAGACTTGACACTTGCACTACAAATCAGACCGGGGGTGGGGGAATTGTAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | GTGACATTTCTCTGCAGGTCTAAGTTCTTCCATCCTCACGGTGGGTCCAGAAGGAATGAAGTCCTCCCTTaGTATTCTACCATCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VTFLCRSKFFHPHGGSRRNEVLP*YSTICS Trigger: AGAGCAGATGGTAGAATACAAAGGGAGGACTTCATT...CCTTCTGGACCCACCGTGAGGATGGAAGAACTTAGACCTGCAGAGAAATGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTCAAGTCTTTTGTAACCATGAATCACAGTTAGTCCTTTCTCTTGAGGACAATGAAGTCCTCCCTTaGTATTCTACCATCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KCQVFCNHESQLVLSLEDNEVLP*YSTICS Trigger: AGAGCAGATGGTAGAATACAAAGGGAGGACTTCATT...GTCCTCAAGAGAAAGGACTAACTGTGATTCATGGTTACAAAAGACTTGACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | AGTGCACCTCAGGCTCAGGGAACCAGCCTCGGGACGTaGATACAAGCTGGACCTCTCCTTCTCCGAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SAPQAQGTSLGT*IQAGPLLLRVP Trigger: AGGGACTCGGAGAAGGAGAGGTCCAGCTTGTATGCACGTCCCGAGGCTGGTTCCCTGAGCCTGAGGTGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS TCA 72 bp | TACGCTAACGGAAGCCAGTTCGGTCTGGAGCCTCTCTaGCAGAGCGATGGTGGCCTCCTGGGTCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YANGSQFGLEPL*QSDGGLLGLSE Trigger: CTCAGAGAGACCCAGGAGGCCACCATCGCTCTGTCAGAGAGGCTCCAGACCGAACTGGCTTCCGTTAGCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025198.15 |
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| CDS TCA 72 bp | TCAGCTGCATGCCTCCATCTTTCAAGACCTCCCTGGTaGTCCGTGGGGTGGAACCCACCGCCATCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SAACLHLSRPPW*SVGWNPPPSPA Trigger: TGCAGGTGATGGCGGTGGGTTCCACCCCACGGATCACCAGGGAGGTCTTGAAAGATGGAGGCATGCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | CACTTGGCTGGACCTGGCGAATCTTCAGAGCCACACTaGCCTCTTCAGTGCTGTCCTCCATCCACTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLAGPGESSEPH*PLQCCPPSTLP Trigger: GGGCAGAGTGGATGGAGGACAGCACTGAAGAGGGCAGTGTGGCTCTGAAGATTCGCCAGGTCCAGCCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | TCCAGCCACGTGGGTGCCATTTGCATACACGTGGACTaGAGGGTAATAGCGGGATCGGAGCCACCTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SSHVGAICIHVD*RVIAGSEPPHL Trigger: GAGGTGAGGTGGCTCCGATCCCGCTATTACCCTGCAGTCCACGTGTATGCAAATGGCACCCACGTGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | CCCAGTCACCTCAGCTCCATCCCGGTACATAATCACTaGCATGTCAGGGTCGGAGCGGTACCACCTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: PSHLSSIPVHNH*HVRVGAVPPHL Trigger: GAGGTGAGGTGGTACCGCTCCGACCCTGACATGCCAGTGATTATGTACCGGGATGGAGCTGAGGTGACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | TGGAAGCGGCACCAGTACTGGCCATCGTCACTTGGCTaGACCTGGCGAATCTTCAGAGCCACACTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: WKRHQYWPSSLG*TWRIFRATLPS Trigger: AGAGGGCAGTGTGGCTCTGAAGATTCGCCAGGTCCAGCCAAGTGACGATGGCCAGTACTGGTGCCGCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | GGCTCAGGGAACCAGCCTCGGGACGTGCATACAAGCTaGACCTCTCCTTCTCCGAGTCCCTCCACATGGATA | + |
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Preference number: 6 (lower is better) Translates to: GSGNQPRDVHTS*TSPSPSPSTWI Trigger: TATCCATGTGGAGGGACTCGGAGAAGGAGAGGTCCAGCTTGTATGCACGTCCCGAGGCTGGTTCCCTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | CATGCCTCCATCTTTCAAGACCTCCCTGGTGATCCGTaGGGTGGAACCCACCGCCATCACCTGCACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: HASIFQDLPGDP*GGTHRHHLHIH Trigger: GTGGATGTGCAGGTGATGGCGGTGGGTTCCACCCCACGGATCACCAGGGAGGTCTTGAAAGATGGAGGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 72 bp | GGGAAGATCCTAGAGCAGCCACTTGGAGTAGCACGCTaGTCTCTCTCCAGTAGTCCCCCTCCTGGAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GKILEQPLGVAR*SLSSSPPPGSG Trigger: GCCGCTTCCAGGAGGGGGACTACTGGAGAGAGACAAGCGTGCTACTCCAAGTGGCTGCTCTAGGATCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | GGCCGTGGGAACCACCCATCAGACGTACACCTCAGCTaGATGCCTCCATCTTTCAAGACCTCCCTGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: GRGNHPSDVHLS*MPPSFKTSLVI Trigger: GATCACCAGGGAGGTCTTGAAAGATGGAGGCATGCAGCTGAGGTGTACGTCTGATGGGTGGTTCCCACGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | GAATGTCCGATTACGCTAACGGAAGCCAGTTCGGTCTaGAGCCTCTCTGACAGAGCGATGGTGGCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ECPITLTEASSV*SLSDRAMVASW Trigger: CCAGGAGGCCACCATCGCTCTGTCAGAGAGGCTCCAGACCGAACTGGCTTCCGTTAGCGTAATCGGACATTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025198.15 |
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| CDS GCA 72 bp | AAACTCATCAACTTTTCTCCCCAGATGCCTTCCCAGTaGACCTCAGGCTCAGGGAACCAGCCTCGGGACGTG | + |
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Preference number: 6 (lower is better) Translates to: KLINFSPQMPSQ*TSGSGNQPRDV Trigger: CACGTCCCGAGGCTGGTTCCCTGAGCCTGAGGTGCACTGGGAAGGCATCTGGGGAGAAAAGTTGATGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CCA 72 bp | TTGGAGTCTGAGAGAGGGAAACGGGCTGTTTTCTCCTaGCCCAGAGGGAGGCTGATGGAGCAGGTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: LESERGKRAVFS*PRGRLMEQVTF Trigger: GAATGTGACCTGCTCCATCAGCCTCCCTCTGGGCCAGGAGAAAACAGCCCGTTTCCCTCTCTCAGACTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | TTCTACCATCTGCTCTCCAGCCACGTGGGTGCCATTTaGATACACGTGGACTGCAGGGTAATAGCGGGATCG | + |
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Preference number: 6 (lower is better) Translates to: FYHLLSSHVGAI*IHVDCRVIAGS Trigger: CGATCCCGCTATTACCCTGCAGTCCACGTGTATGCAAATGGCACCCACGTGGCTGGAGAGCAGATGGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 90 bp | AGAGGCAGCACCACAACAGGCAGGGTCATCCATAGCAAAGCTATCTaGGAGTCTGAGAGAGGGAAACGGGCTGTTTTCTCCTGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGSTTTGRVIHSKAI*ESERGKRAVFSWPR Trigger: TCTGGGCCAGGAGAAAACAGCCCGTTTCCCTCTCTCAGACTCCAAGATAGCTTTGCTATGGATGACCCTGCCTGTTGTGGTGCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 72 bp | GGACCTCTCCTTCTCCGAGTCCCTCCACATGGATATTaGGGGAAGATCCTAGAGCAGCCACTTGGAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPLLLRVPPHGY*GKILEQPLGVA Trigger: TGCTACTCCAAGTGGCTGCTCTAGGATCTTCCCCAAATATCCATGTGGAGGGACTCGGAGAAGGAGAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 72 bp | ATTCTACCATCTGCTCTCCAGCCACGTGGGTGCCATTaGCATACACGTGGACTGCAGGGTAATAGCGGGATC | + |
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Preference number: 6 (lower is better) Translates to: ILPSALQPRGCH*HTRGLQGNSGI Trigger: GATCCCGCTATTACCCTGCAGTCCACGTGTATGCAAATGGCACCCACGTGGCTGGAGAGCAGATGGTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 72 bp | CAGAAGTGTCTCCACCTGGAACAGCTCCTGGCTCCCTaGCTGAAAGGCCTCGGAAAACGATGGCATTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QKCLHLEQLLAP*LKGLGKRWHCL Trigger: AAGACAATGCCATCGTTTTCCGAGGCCTTTCAGCAAGGGAGCCAGGAGCTGTTCCAGGTGGAGACACTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS TCA 72 bp | CACCGGTACTGCCCTTCATCCGAAGTTCTGGCATTGTaGATTTGCAGGGTCAGTTTTCCCTCGTGGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRYCPSSEVLAL*ICRVSFPSWMA Trigger: TGCCATCCACGAGGGAAAACTGACCCTGCAAATTCACAATGCCAGAACTTCGGATGAAGGGCAGTACCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS TCA 72 bp | TACGCTAACGGAAGGCAATTTAAAGAAGAGCCTTGCTaGCAGAGCGATGGTGGCCTCCTGGGTCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YANGRQFKEEPC*QSDGGLLGLSE Trigger: CTCAGAGAGACCCAGGAGGCCACCATCGCTCTGTCAGCAAGGCTCTTCTTTAAATTGCCTTCCGTTAGCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178562.2 |
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| CDS CCA 72 bp | GATTGGGAGGTTAGGACCGACCACTCTGAAGTCATCTaGGTGCTTTATAGTCAGCAGGACGAAGAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: DWEVRTDHSEVI*VLYSQQDEEEG Trigger: TCCTTCCTCTTCGTCCTGCTGACTATAAAGCACCCAGATGACTTCAGAGTGGTCGGTCCTAACCTCCCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS TCA 72 bp | CGCCGCCTGTGGTTTTCGTCATTCTTGTTATTTTCCTaGTTGCTGCTGTGTGTTTGTTCATTGGTCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRLWFSSFLLFS*LLLCVCSLVRR Trigger: GCGGCGGACCAATGAACAAACACACAGCAGCAATCAGGAAAATAACAAGAATGACGAAAACCACAGGCGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 72 bp | GTACTGCCCTTCATCCGAAGTTCTGGCATTGTGAATTaGCAGGGTCAGTTTTCCCTCGTGGATGGCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: VLPFIRSSGIVN*QGQFSLVDGIS Trigger: ACTGATGCCATCCACGAGGGAAAACTGACCCTGCAAATTCACAATGCCAGAACTTCGGATGAAGGGCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS CAA 90 bp | GTGGTTTTCGTCATTCTTGTTATTTTCCTGATTGCTGCTGTGTGTTaGTTCATTGGTCCGCCGCCACCGTTTCACCTTGATCAGGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: VVFVILVIFLIAAVC*FIGPPPPFHLDQVD Trigger: ATCGACCTGATCAAGGTGAAACGGTGGCGGCGGACCAATGAACAAACACACAGCAGCAATCAGGAAAATAACAAGAATGACGAAAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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| CDS GCA 72 bp | TGTGGTTTTCGTCATTCTTGTTATTTTCCTGATTGCTaGTGTGTGTTTGTTCATTGGTCCGCCGCCACCGTT | + |
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Preference number: 6 (lower is better) Translates to: CGFRHSCYFPDC*CVFVHWSAATV Trigger: AACGGTGGCGGCGGACCAATGAACAAACACACAGCAGCAATCAGGAAAATAACAAGAATGACGAAAACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025198.15 ENSMUST00000178562.2 |
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