Pregenerated sensors for BTNL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020490Ensembl transcript IDs: ENSMUST00000020792.12, ENSMUST00000069941.13, ENSMUST00000108818.4, ENSMUST00000142499.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGAGCAGCACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTTaGAATGGAAGATTCTCAGGGAGCCGAGAGCTGGGTCCAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: TEQHPTPWALLLPQS*NGRFSGSRELGPAL Trigger: AAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CCA 90 bp | CTCAGTCCCTATGGAACAGGCACCACGGAGCAGCACCCCACTCCCTaGGCTCTTCTGCTGCCGCAGTCTTGGAATGGAAGATTCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LSPYGTGTTEQHPTP*ALLLPQSWNGRFSG Trigger: CCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGCCTGTTCCATAGGGACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR TCA 90 bp | TCAGTGTTCCCCCAAATATGTGGGAGTCAGGACCTCTCGCATCTGTaGCCAGGATCATTTGGAGGAAAGGGTCCTTACAGAGCAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SVFPQICGSQDLSHL*PGSFGGKGPYRAVK Trigger: CTTGACTGCTCTGTAAGGACCCTTTCCTCCAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTTGGGGGAACACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR TCA 90 bp | AGCCCAGGGGCTGCCTGTGCTTGTGACATTTCCTTGCTAATCCACTaGCTAACCATAACTGCTCTTGACTGGGAACCCAAAACACTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SPGAACACDISLLIH*LTITALDWEPKTLG Trigger: ACCTAGTGTTTTGGGTTCCCAGTCAAGAGCAGTTATGGTTAGTCAGTGGATTAGCAAGGAAATGTCACAAGCACAGGCAGCCCCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR GCA 90 bp | AGGGAGAGGGACTGGAGAGATGGTTCTATGATTAAGAGCCCTGGCTaGTGTTGCAAAAGAATGGAGTTTTGTTCCCAGCACCCTCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: RERDWRDGSMIKSPG*CCKRMEFCSQHPLS Trigger: TGACAGAGGGTGCTGGGAACAAAACTCCATTCTTTTGCAACAGCAGCCAGGGCTCTTAATCATAGAACCATCTCTCCAGTCCCTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR GCA 90 bp | AGATGGAGAGAGAGTGAGAAGGGAGGGTACGACTATTATTTACTGTaGAACCACAACACACCCACCACTGGGCTGGATGGTCTACATACA | + |
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Preference number: 1 (lower is better) Translates to: RWRESEKGGYDYYLL*NHNTPTTGLDGLHT Trigger: TGTATGTAGACCATCCAGCCCAGTGGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACTCTCTCTCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR GCA 90 bp | AGGGACTGGAGAGATGGTTCTATGATTAAGAGCCCTGGCTGCTGTTaGAAAAGAATGGAGTTTTGTTCCCAGCACCCTCTGTCAACGCAT | + |
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Preference number: 1 (lower is better) Translates to: RDWRDGSMIKSPGCC*KRMEFCSQHPLSTH Trigger: ATGCGTTGACAGAGGGTGCTGGGAACAAAACTCCATTCTTTTGCAACAGCAGCCAGGGCTCTTAATCATAGAACCATCTCTCCAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CCA 90 bp | CAAACCTCTGAATGGAGCCAGCTGGCGTTAACGCGGGCTCTGAGTTaGATTGCTAAGAGAAAATGTTTAAGGAGAACCAGAGAAGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: QTSEWSQLALTRALS*IAKRKCLRRTREEL Trigger: CAGCTCTTCTCTGGTTCTCCTTAAACATTTTCTCTTAGCAATCCAACTCAGAGCCCGCGTTAACGCCAGCTGGCTCCATTCAGAGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR GCA 90 bp | CCCCTTATCCACAATCTTTTTCAATGTCTCATCTCCAAATTACAATaGCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: PLIHNLFQCLISKLQ*LQKSLTLVGGVSIW Trigger: CCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCATTGTAATTTGGAGATGAGACATTGAAAAAGATTGTGGATAAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR TCA 90 bp | ACGTCTTTAGTCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTaGTCTACACATTTTCTATCTGGCCAATTTGTTACATATAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: TSLVSELKRWRQVVL*STHFLSGQFVTYKY Trigger: ATACTTATATGTAACAAATTGGCCAGATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGACTAAAGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CCA 90 bp | AAGTGTCCATTAAAACCCACTTCTCATCTGTTTTCTCTTTCAATATaGATGTGGTTTCTGTCCTCACTGAACTCTGACCAAAGTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: KCPLKPTSHLFSLSI*MWFLSSLNSDQSLR Trigger: CCTAAGACTTTGGTCAGAGTTCAGTGAGGACAGAAACCACATCCATATTGAAAGAGAAAACAGATGAGAAGTGGGTTTTAATGGACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR GCA 90 bp | GCACCACGGAGCAGCACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTTGGAGGCACCGCACCTGTGTaGGCAGACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: APRSSTPLPGLFCCRSLGGTAPV*ADTHTH Trigger: GTGTGTGTGTGTGTCTGCGCACACAGGTGCGGTGCC...TCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCACTCTGTAGACCAGGCTGGCATCGACCTCAGAGATCCGCCCTCCTTCAGCACCCCACTCCCTaGGCTCTTCTGCTGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: SNSLCRPGWHRPQRSALLQHPTP*ALLLPQ Trigger: CTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTG...AAGGAGGGCGGATCTCTGAGGTCGATGCCAGCCTGGTCTACAGAGTGAGTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCGCCTTCAGAAATCCCTaGCCCTGGTGGGTGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: KSWPYDHRASICSDVTASAFRNP*PWWVVS Trigger: TGACACCACCCACCAGGGTCAGGGATTTCTGAAGGC...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | GCACCACGGAGCAGCACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTTGGAATCTTTGCTTTTGTGTaGCTTGAACTAGTCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: APRSSTPLPGLFCCRSLGIFAFV*LELVCH Trigger: GTGACAGACTAGTTCAAGTCACACAAAAGCAAAGAT...TCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | GAGATTCCCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTAGCCTTCAGAAATCCCTaGCCCTGGTGGGTGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: EIPRILTWQEPLSRSQRLAFRNP*PWWVVS Trigger: TGACACCACCCACCAGGGTCAGGGATTTCTGAAGGC...TAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGGAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR TCA 90 bp | GGACTCCTCCAGACACTGGAAGGGAGGCCTGGTTTTCCCATGCTTTCAGGAGAAAGACCAGGGCATTGCTaGTCTCCTTGGCTAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GLLQTLEGRPGFPMLSGERPGHC*SPWLVS Trigger: ACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCT...TTCTCCTGAAAGCATGGGAAAACCAGGCCTCCCTTCCAGTGTCTGGAGGAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCAAGATGGAGAGAGAGTaGGAAGGGAGGGTACGACTA | + |
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Preference number: 2 (lower is better) Translates to: KSWPYDHRASICSDVTASKMERE*EGRVRL Trigger: TAGTCGTACCCTCCCTTCTCACTCTCTCTCCATCTT...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR GCA 90 bp | ATCGGATGCTATCCTCTGGCCTCTGTGGGCACCGCACCTGTGTGCGCAGACACAGACTATTATTTACTGTaGAACCACAACACACCCACC | + |
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Preference number: 2 (lower is better) Translates to: IGCYPLASVGTAPVCADTDYYLL*NHNTPT Trigger: GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTC...TGTGTCTGCGCACACAGGTGCGGTGCCCACAGAGGCCAGAGGATAGCATCCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | ACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACACACCCACCACTGGGCTaGATGGTCTACATACATACA | + |
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Preference number: 2 (lower is better) Translates to: TAARNPVSCSGLHRYTHTHPPLG*MVYIHT Trigger: TGTATGTATGTAGACCATCCAGCCCAGTGGTGGGTG...TGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGACCTTTCTCTTGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGCCTGACCCTGGTGGGTaGTGTCAGCATTTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: EDLSLASMYRLLQSLWTTPDPGG*CQHLAQ Trigger: CTGTGCCAAATGCTGACACCACCCACCAGGGTCAGG...CGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGAAGGGAGGGTACGACTATTATTTACTGTGCAACCACAACACACCCACCCCTGACCCTGGTGGGTaGTGTCAGCATTTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SEKGGYDYYLLCNHNTPTPDPGG*CQHLAQ Trigger: CTGTGCCAAATGCTGACACCACCCACCAGGGTCAGG...GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACACACACACCCAGGATTCTCACTTaGCAGGAACCACTTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: ARNPVSCSGLHRYTHTHTPRILT*QEPLSR Trigger: CCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGG...TGTGTGTGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATTCTCAGGGAGCCGAGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGTCCATATAGTTTGCCTCACTaGGAGAGGGCAGCCATAGTA | + |
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Preference number: 2 (lower is better) Translates to: KILREPRAGSSTCVLKCPYSLPH*ERAAIV Trigger: TACTATGGCTGCCCTCTCTCAGTGAGGCAAACTATA...TGGACACTTGAGAACACAAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | GGACTCCTCCAGACACTGGAAGGGAGGCCTGGTTTTCCCATGCTTTCAGGAGAACCAACCCTGACAATCTaGCTTCAGTTCAGATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GLLQTLEGRPGFPMLSGEPTLTI*LQFRFL Trigger: CAGAAATCTGAACTGAAGTCAGATTGTCAGGGTTGG...TTCTCCTGAAAGCATGGGAAAACCAGGCCTCCCTTCCAGTGTCTGGAGGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCCACCACTGGGCTGGATaGTCTACATACATACATACA | + |
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Preference number: 2 (lower is better) Translates to: KSWPYDHRASICSDVTASHHWAG*STYIHT Trigger: TGTATGTATGTATGTAGACCATCCAGCCCAGTGGTG...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTGGAACCCTAGACAGGGATCCAGTGTCCTGTTCTaGCCTCCACAGGTACACACA | + |
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Preference number: 2 (lower is better) Translates to: KHKLYRVSAYLEWNPRQGSSVLF*PPQVHT Trigger: TGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGA...TCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| 3UTR-3UTR TCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCGTTAAGGTACATAAATaGCTCCCCTTATCCACAATC | + |
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Preference number: 2 (lower is better) Translates to: ETRALLISLASEWHLSESVKVHK*LPLSTI Trigger: GATTGTGGATAAGGGGAGTCATTTATGTACCTTAAC...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCATCTCCAAATTACAATaGCTTCAGAAATCCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: ETRALLISLASEWHLSESISKLQ*LQKSLT Trigger: GGTCAGGGATTTCTGAAGGCATTGTAATTTGGAGAT...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATGAGACCAGGGCATTGGGTGGTGTCAGCATTTaGCACAGAAATTTGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRNHFLGPRGYKYETRALGGVSI*HRNLVG Trigger: CCCTACCAAATTTCTGTGCCAAATGCTGACACCACC...CAATGCCCTGGTCTCATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATGGCCTGGTTTTCCCATaGTTTCAGGAGAAGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYGLVFP*FQEKPT Trigger: GGTTGGCTTCTCCTGAAAGCATGGGAAAACCAGGCC...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CAA 90 bp | AAATATGTGGGAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTaGGAGGAAAGGGTCCTTACAGAGCAGTCAAGTTACAAACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KYVGVRTSRICDQDH*EERVLTEQSSYKPL Trigger: CAGAGGTTTGTAACTTGACTGCTCTGTAAGGACCCTTTCCTCCAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACACACACACACATCACTACATGGCAGGAATaGTTGTATAGTTTGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: NPVSCSGLHRYTHTHTHITTWQE*LYSLPH Trigger: GTGAGGCAAACTATACAATCATTCCTGCCATGTAGT...GATGTGTGTGTGTGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAGATTCTCAGGGAGCCGAGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGAGCATAGCCAGCCCCTaGTGTTTCATCATATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: MEDSQGAESWVQHLCSQVSIASP*CFIIFL Trigger: TAAAAATATGATGAAACACCAGGGGCTGGCTATGCT...CACTTGAGAACACAAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATCCCAGGATTCTCACTTaGCAGGAACCACTTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYPRILT*QEPLSR Trigger: CCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGG...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CAA 90 bp | CCCAAAACACTAGGTGACCTTTGTCTGTGTCTGAGGACCTTTCTCTaGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGATCT | + |
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Preference number: 2 (lower is better) Translates to: PKTLGDLCLCLRTFL*QACIGYYSPYGQRS Trigger: AGATCGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTCAGACACAGACAAAGGTCACCTAGTGTTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCTTGAACTTGCAACAAACAGCAAGAGGGAATGTTGGGTCTGCAGGATGGGTTAAGGTACATAAATaGCTCCCCTTATCCACAATC | + |
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Preference number: 2 (lower is better) Translates to: PCLNLQQTARGNVGSAGWVKVHK*LPLSTI Trigger: GATTGTGGATAAGGGGAGTCATTTATGTACCTTAAC...CCATCCTGCAGACCCAACATTCCCTCTTGCTGTTTGTTGCAAGTTCAAGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | GAGGACCTTTCTCTTGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGACGCGGGCTCTGAGTTaGATTGCTAAGAGAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: EDLSLASMYRLLQSLWTTTRALS*IAKRKC Trigger: ACATTTTCTCTTAGCAATCCAACTCAGAGCCCGCGT...CGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR GCA 90 bp | GAGGACCTTTCTCTTGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGATCTCCAAATTACAATaGCTTCAGAAATCCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: EDLSLASMYRLLQSLWTTISKLQ*LQKSLT Trigger: GGTCAGGGATTTCTGAAGGCATTGTAATTTGGAGAT...CGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATCACACCAACAATCCCTaGTTGAACTTGCAACAAACA | + |
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Preference number: 2 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYHTNNP*LNLQQT Trigger: TGTTTGTTGCAAGTTCAAGCAGGGATTGTTGGTGTG...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATAGCATAGCCAGCCCCTaGTGTTTCATCATATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYSIASP*CFIIFL Trigger: TAAAAATATGATGAAACACCAGGGGCTGGCTATGCT...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAATATGTGGGAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTTGTTTTCTCTTTCAATATaGATGTGGTTTCTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPKYVGVRTSRICDQDHLFSLSI*MWFLSS Trigger: TGAGGACAGAAACCACATCCATATTGAAAGAGAAAA...CAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTTGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATGTGTGTGTCTTTTATTaGGTCTCATCTCTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYVCVFY*VSSLLP Trigger: TGGGAGAAGAGATGAGACCCAATAAAAGACACACAC...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTTATAGTTTGCCTCACTaGGAGAGGGCAGCCATAGTA | + |
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Preference number: 2 (lower is better) Translates to: CRDISRRTGENESSPHCGYSLPH*ERAAIV Trigger: TACTATGGCTGCCCTCTCTCAGTGAGGCAAACTATA...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTATCAGTAATACTCCACAAAAGATGGAGAGAGAGTaGGAAGGGAGGGTACGACTA | + |
|
Preference number: 2 (lower is better) Translates to: RTGENESSPHCGISNTPQKMERE*EGRVRL Trigger: TAGTCGTACCCTCCCTTCTCACTCTCTCTCCATCTT...TTGTGGAGTATTACTGATACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTGACTATTATTTACTGTaGAACCACAACACACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: CRDISRRTGENESSPHCGDYYLL*NHNTPT Trigger: GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTC...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| 3UTR GCA 72 bp | CCACGGAGCAGCACCCCACTCCCTGGGCTCTTCTGCTaGCGCAGTCTTGGAATGGAAGATTCTCAGGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PRSSTPLPGLFC*RSLGMEDSQGA Trigger: GGCTCCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR GCA 72 bp | GCACCACGGAGCAGCACCCCACTCCCTGGGCTCTTCTaGTGCCGCAGTCTTGGAATGGAAGATTCTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: APRSSTPLPGLF*CRSLGMEDSQG Trigger: TCCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | CACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTTaGAATGGAAGATTCTCAGGGAGCCGAGAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HPTPWALLLPQS*NGRFSGSRELG Trigger: ACCCAGCTCTCGGCTCCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | TATGGAACAGGCACCACGGAGCAGCACCCCACTCCCTaGGCTCTTCTGCTGCCGCAGTCTTGGAATGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YGTGTTEQHPTP*ALLLPQSWNGR Trigger: TCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGCCTGTTCCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGTTTTTCTCAGTCCCTATGGAACAGGCACCACGGAGCAGCACCCCACTCCTCTGCTGCCGCAGTCTaGGAATGGAAGATTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERFSQSLWNRHHGAAPHSSAAAV*EWKILR Trigger: CCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGA...GGAGTGGGGTGCTGCTCCGTGGTGCCTGTTCCATAGGGACTGAGAAAAACGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR TCA 72 bp | GGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTaGCTGCCAGCTAAGAGGACTCCTCCAGACACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHMTTGPAFAVM*LPAKRTPPDTG Trigger: TCCAGTGTCTGGAGGAGTCCTCTTAGCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCTTGAACTTGCAACAAACAGCAAGAGGGAATGTTGGGTCTGCAGGATGGGAGACTCTGTTTCTCTaGGGGCCACCAGCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLNLQQTARGNVGSAGWETLFL*GPPASQ Trigger: CTGTGAAGCTGGTGGCCCCAAGAGAAACAGAGTCTC...CCATCCTGCAGACCCAACATTCCCTCTTGCTGTTTGTTGCAAGTTCAAGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR TCA 72 bp | GTCCCAGAGGCTACAAATATGAGACCAGGGCATTGCTaGTCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VPEATNMRPGHC*SPWLVSGISPS Trigger: ACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTCATATTTGTAGCCTCTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| 3UTR TCA 72 bp | CAAACAGCAAGAGGGAATGTTGGGTCTGCAGGATGGTaGGACTCTGTTTCTCTTGGGGCCACCAGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QTARGNVGSAGW*DSVSLGATSFT Trigger: TGTGAAGCTGGTGGCCCCAAGAGAAACAGAGTCTCACCATCCTGCAGACCCAACATTCCCTCTTGCTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR TCA 72 bp | CTCTCCAAAGCCCAGCCCAGGGGCTGCCTGTGCTTGTaGCATTTCCTTGCTAATCCACTGACTAACCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSKAQPRGCLCL*HFLANPLTNHN Trigger: GTTATGGTTAGTCAGTGGATTAGCAAGGAAATGTCACAAGCACAGGCAGCCCCTGGGCTGGGCTTTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR GCA 72 bp | CATCGACCTCAGAGATCCGCCCTCCTTTTTAGATTATaGATGTGTCACCTCCTGGTGTACAGGCATGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HRPQRSALLFRL*MCHLLVYRHAC Trigger: GCACGCATGCCTGTACACCAGGAGGTGACACATGCATAATCTAAAAAGGAGGGCGGATCTCTGAGGTCGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR TCA 72 bp | CCCCAAATATGTGGGAGTCAGGACCTCTCGCATCTGTaGCCAGGATCATTTGGAGGAAAGGGTCCTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQICGSQDLSHL*PGSFGGKGPYR Trigger: TCTGTAAGGACCCTTTCCTCCAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR GCA 72 bp | GAGAGTGAGAAGGGAGGGTACGACTATTATTTACTGTaGAACCACAACACACCCACCACTGGGCTGGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESEKGGYDYYLL*NHNTPTTGLDG Trigger: ACCATCCAGCCCAGTGGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| 3UTR CCA 72 bp | CTTAACTACGGCTGCAAGGAATCCAGTGTCCTGTTCTaGCCTCCACAGGTACACACACACACACACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LNYGCKESSVLF*PPQVHTHTHTH Trigger: ATGTGTGTGTGTGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTAGTTAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| 3UTR TCA 72 bp | ACAAGGGAAGGGAGAGGGACTGGAGAGATGGTTCTATaGTTAAGAGCCCTGGCTGCTGTTGCAAAAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: TREGRGTGEMVL*LRALAAVAKEW Trigger: CCATTCTTTTGCAACAGCAGCCAGGGCTCTTAATCATAGAACCATCTCTCCAGTCCCTCTCCCTTCCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | ATTACAATGCCTTCAGAAATCCCTGACCCTGGTGGGTaGTGTCAGCATTTGGCACAGAAATTTGGTAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ITMPSEIPDPGG*CQHLAQKFGRG Trigger: CCCCCTACCAAATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCATTGTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| 3UTR CCA 72 bp | GAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTTaGAGGAAAGGGTCCTTACAGAGCAGTCAAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: ESGPLASVTRII*RKGSLQSSQVT Trigger: TGTAACTTGACTGCTCTGTAAGGACCCTTTCCTCCAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | AGTCTTGGAATGGAAGATTCTCAGGGAGCCGAGAGCTaGGTCCAGCACTTGTGTTCTCAAGTGTCCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLGMEDSQGAES*VQHLCSQVSIK Trigger: TTTAATGGACACTTGAGAACACAAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTTCCATTCCAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | CTGCTTGAACTTGCAACAAACAGCAAGAGGGAATGTTaGGTCTGCAGGATGGTGAGACTCTGTTTCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLELATNSKREC*VCRMVRLCFSW Trigger: CCAAGAGAAACAGAGTCTCACCATCCTGCAGACCCAACATTCCCTCTTGCTGTTTGTTGCAAGTTCAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATTATGAGACCAGGGCATaGCTGATCTCCTTGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYYETRA*LISLAS Trigger: ACTAGCCAAGGAGATCAGCAATGCCCTGGTCTCATA...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATGAGCCCTGGCTGCTGTaGCAAAAGAATGGAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYEPWLL*QKNGVL Trigger: CAAAACTCCATTCTTTTGCAACAGCAGCCAGGGCTC...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTGATCTACACATTTTCTATCAAAAGAATGGAGTTTaGTTCCCAGCACCCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SQSSRGGGRWFSDLHIFYQKNGV*FPAPSV Trigger: GACAGAGGGTGCTGGGAACAAAACTCCATTCTTTTG...ATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR TCA 72 bp | GCTGCCTGTGCTTGTGACATTTCCTTGCTAATCCACTaGCTAACCATAACTGCTCTTGACTGGGAACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AACACDISLLIH*LTITALDWEPK Trigger: TTTGGGTTCCCAGTCAAGAGCAGTTATGGTTAGTCAGTGGATTAGCAAGGAAATGTCACAAGCACAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR GCA 72 bp | GACTGGAGAGATGGTTCTATGATTAAGAGCCCTGGCTaGTGTTGCAAAAGAATGGAGTTTTGTTCCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DWRDGSMIKSPG*CCKRMEFCSQH Trigger: GTGCTGGGAACAAAACTCCATTCTTTTGCAACAGCAGCCAGGGCTCTTAATCATAGAACCATCTCTCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR CCA 72 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTaGAACCCTAGACAGGGATCAAATTCCAACAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KHKLYRVSAYLE*NPRQGSNSNKS Trigger: GGACTTGTTGGAATTTGATCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| 3UTR TCA 72 bp | GTCTCAGAGCTCAAGAGGTGGAGGCAGGTGGTTCTCTaGTCTACACATTTTCTATCTGGCCAATTTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: VSELKRWRQVVL*STHFLSGQFVT Trigger: TGTAACAAATTGGCCAGATAGAAAATGTGTAGATCAGAGAACCACCTGCCTCCACCTCTTGAGCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTTATGAGACCAGGGCATaGCTGATCTCCTTGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: CRDISRRTGENESSPHCGYETRA*LISLAS Trigger: ACTAGCCAAGGAGATCAGCAATGCCCTGGTCTCATA...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| 3UTR CCA 72 bp | ATTTACTGTGCAACCACAACACACCCACCACTGGGCTaGATGGTCTACATACATACATACATACATACATAC | + |
|
Preference number: 3 (lower is better) Translates to: IYCATTTHPPLG*MVYIHTYIHTY Trigger: GTATGTATGTATGTATGTATGTATGTAGACCATCCAGCCCAGTGGTGGGTGTGTTGTGGTTGCACAGTAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| 3UTR TCA 72 bp | TTTCTCTTTCAATATGGATGTGGTTTCTGTCCTCACTaGACTCTGACCAAAGTCTTAGGAATCTTGGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: FLFQYGCGFCPH*TLTKVLGILGS Trigger: AGATCCCAAGATTCCTAAGACTTTGGTCAGAGTTCAGTGAGGACAGAAACCACATCCATATTGAAAGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR GCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCGGACGAGCCCCGCCCTaGCACCTTCAGCCACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRALLISLASEWHLSESGRAPP*HLQPQG Trigger: ACCCTGTGGCTGAAGGTGGCAGGGCGGGGCTCGTCC...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| 3UTR CAA 72 bp | GCACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTaGGAATGGAAGATTCTCAGGGAGCCGAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APHSLGSSAAAV*EWKILREPRAG Trigger: CCCAGCTCTCGGCTCCCTGAGAATCTTCCATTCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR GCA 90 bp | GCACCACGGAGCAGCACCCCACTCCCTGGGCTCTTCTGCTGCCGCAGTCTTGGACCAGAAGTCAGGAGTTaGAGGAAGATGAAGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: APRSSTPLPGLFCCRSLGPEVRS*RKMKLT Trigger: GGTCAGCTTCATCTTCCTGCAACTCCTGACTTCTGG...TCCAAGACTGCGGCAGCAGAAGAGCCCAGGGAGTGGGGTGCTGCTCCGTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR GCA 90 bp | ATCGGATGCTATCCTCTGGCCTCTGTGGGCACCGCACCTGTGTGCGCAGACACAGGGCCACGAGGCCAGTaGTGGCTGAAACTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGCYPLASVGTAPVCADTGPRGQ*WLKLRS Trigger: ACTTCTCAGTTTCAGCCAGCACTGGCCTCGTGGCCC...TGTGTCTGCGCACACAGGTGCGGTGCCCACAGAGGCCAGAGGATAGCATCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR CCA 90 bp | TACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACCCAGCCACTCCACCTTaGGCTCGGGGTACCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGCKESSVLFWPPQVHTHPATPP*ARGTSL Trigger: CAGGCTGGTACCCCGAGCCCAAGGTGGAGTGGCTGG...GTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCGAGGCCATGCTGGGGTaGCTTGGGGATCCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRALLISLASEWHLSESEAMLG*LGDPSF Trigger: GAAGGAAGGATCCCCAAGTCACCCCAGCATGGCCTC...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCATGGCCAGAAGTGGGTaGGGAGGTCCAAGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETRALLISLASEWHLSESMARSG*GGPRTR Trigger: CCTCGTCCTTGGACCTCCCCACCCACTTCTGGCCAT...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATCCGCCGGAGGGGCTCTaGAGGAGACAGGCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNPPEGL*RRQASP Trigger: CGGACTTGCCTGTCTCCTCCAGAGCCCCTCCGGCGG...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCGCCTCAAATCGCTCTTaGGCCAGGATGCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSWPYDHRASICSDVTASASNRS*ARMQGS Trigger: GGACCCCTGCATCCTGGCTCAAGAGCGATTTGAGGC...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR TCA 90 bp | ACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACAGAGGCCATGCTGGGGTaGCTTGGGGATCCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAARNPVSCSGLHRYTHTEAMLG*LGDPSF Trigger: GAAGGAAGGATCCCCAAGTCACCCCAGCATGGCCTC...TGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCCTCCAGACACTGGAAGGGAGGCCTGGTTTTCCCATGCTTTCAGGAGAAATGGCCAGAAGTGGGTaGGGAGGTCCAAGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLQTLEGRPGFPMLSGEMARSG*GGPRTR Trigger: CCTCGTCCTTGGACCTCCCCACCCACTTCTGGCCAT...TTCTCCTGAAAGCATGGGAAAACCAGGCCTCCCTTCCAGTGTCTGGAGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR CCA 90 bp | GAGATTCCCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACCAGCCACTCCACCTTaGGCTCGGGGTACCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIPRILTWQEPLSRSQRLPATPP*ARGTSL Trigger: CAGGCTGGTACCCCGAGCCCAAGGTGGAGTGGCTGG...TAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGGAATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCTGGACAGAGGCCTTCTaGACAGGGAGGCCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSWPYDHRASICSDVTASWTEAF*TGRPAG Trigger: ACCTGCTGGCCTCCCTGTCCAGAAGGCCTCTGTCCA...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR CCA 90 bp | TACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACTGGACAGAGGCCTTCTaGACAGGGAGGCCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YGCKESSVLFWPPQVHTHWTEAF*TGRPAG Trigger: ACCTGCTGGCCTCCCTGTCCAGAAGGCCTCTGTCCA...GTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACACACACAGCCTCAAATCGCTCTTaGGCCAGGATGCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARNPVSCSGLHRYTHTHTASNRS*ARMQGS Trigger: GGACCCCTGCATCCTGGCTCAAGAGCGATTTGAGGC...TGTGTGTGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACACTGGGAGGAGGGGATTaGAGATGGAGCAAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAARNPVSCSGLHRYTHTLGGGD*RWSKSG Trigger: GCCTGACTTGCTCCATCTCCAATCCCCTCCTCCCAG...TGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCACTCTGTAGACCAGGCTGGCATCGACCTCAGAGATCCGCCCTCCTTAGGGGTCTGGGGTCATaGGTCCAGAGGCAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNSLCRPGWHRPQRSALLRGLGS*VQRQKN Trigger: ATTCTTCTGCCTCTGGACCCATGACCCCAGACCCCT...AAGGAGGGCGGATCTCTGAGGTCGATGCCAGCCTGGTCTACAGAGTGAGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS-3UTR TCA 90 bp | GAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTCCGAGTCCCGCTTCACGCTTTTCTaGTCCTCAGACACCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRALLISLASEWHLSESRFTLF*SSDTMS Trigger: ACTCATGGTGTCTGAGGATCAGAAAAGCGTGAAGCG...GGACTCGGAGAGATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR GCA 90 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTGGAACCCTAGACAGGGAAGTGCCCAGAGGCCATaGTGGGGTGACTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KHKLYRVSAYLEWNPRQGSAQRP*WGDLGI Trigger: GATCCCCAAGTCACCCCAGCATGGCCTCTGGGCACT...TCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR GCA 90 bp | AAGAGCTGGCCATATGACCACAGGGCCAGCATTTGCAGTGATGTGACTGCCAGCAGGCAGAAGAATGGCTaGAGGGGACCAGAAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSWPYDHRASICSDVTASRQKNG*RGPEKE Trigger: CTCCTTTTCTGGTCCCCTGCAGCCATTCTTCTGCCT...GCTGGCAGTCACATCACTGCAAATGCTGGCCCTGTGGTCATATGGCCAGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CCA 90 bp | TACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACAGGGTGGCCTGGCTGTaGGATGTGTACTCCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YGCKESSVLFWPPQVHTHRVAWL*DVYSLN Trigger: GTTTAAGGAGTACACATCCCACAGCCAGGCCACCCT...GTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACCCAGAGGCAGAAGAATaGCTGCAGGGGACCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YGCKESSVLFWPPQVHTHPEAEE*LQGTRK Trigger: TTTTCTGGTCCCCTGCAGCCATTCTTCTGCCTCTGG...GTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR GCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATAGTGCCCAGAGGCCATaGTGGGGTGACTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYSAQRP*WGDLGI Trigger: GATCCCCAAGTCACCCCAGCATGGCCTCTGGGCACT...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATAACTATGGCCAGAAGTaGGTGGGGAGGTCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNNYGQK*VGRSKD Trigger: GTCCTTGGACCTCCCCACCCACTTCTGGCCATAGTT...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATCCTTCAGCCACAGGGTaGCCTGGCTGTGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYPSATG*PGCGMC Trigger: ACACATCCCACAGCCAGGCCACCCTGTGGCTGAAGG...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGAAGGGAGGGTACGACTATTATTTACTGTGCAACCACAACACACCCACCCCTTCAGCCACAGGGTaGCCTGGCTGTGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEKGGYDYYLLCNHNTPTPSATG*PGCGMC Trigger: ACACATCCCACAGCCAGGCCACCCTGTGGCTGAAGG...GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACAGGATGCAGGGGTCCTaGTTAAATCTCCTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YGCKESSVLFWPPQVHTHRMQGS*LNLLEL Trigger: CAGTTCCAGGAGATTTAACCAGGACCCCTGCATCCT...GTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATAGGGGTCTGGGGTCATaGGTCCAGAGGCAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNRGLGS*VQRQKN Trigger: ATTCTTCTGCCTCTGGACCCATGACCCCAGACCCCT...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR TCA 90 bp | ATCGGATGCTATCCTCTGGCCTCTGTGGGCACCGCACCTGTGTGCGCAGACACACAGGGAGCCATTGGTTaGATTATAAAAGGAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGCYPLASVGTAPVCADTQGAIG*IIKGDL Trigger: CAAATCTCCTTTTATAATTCAACCAATGGCTCCCTG...TGTGTCTGCGCACACAGGTGCGGTGCCCACAGAGGCCAGAGGATAGCATCCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR GCA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTGGACGAGCCCCGCCCTaGCACCTTCAGCCACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRDISRRTGENESSPHCGGRAPP*HLQPQG Trigger: ACCCTGTGGCTGAAGGTGGCAGGGCGGGGCTCGTCC...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATGAGACCAGGGCATTGAGGCAGAAGAATGGCTaGAGGGGACCAGAAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRNHFLGPRGYKYETRALRQKNG*RGPEKE Trigger: CTCCTTTTCTGGTCCCCTGCAGCCATTCTTCTGCCT...CAATGCCCTGGTCTCATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATGAGACCAGGGCATTGAGGGTGGCCTGGCTGTaGGATGTGTACTCCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRNHFLGPRGYKYETRALRVAWL*DVYSLN Trigger: GTTTAAGGAGTACACATCCCACAGCCAGGCCACCCT...CAATGCCCTGGTCTCATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATCGGATGCCTTTGTCCTaGGTGTCAGTCACACGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNRMPLS*VSVTRI Trigger: AATCCGTGTGACTGACACCCAGGACAAAGGCATCCG...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TCAAACTCACTCTGTAGACCAGGCTGGCATCGACCTCAGAGATCCGCCCTCCTTACTCTCAGCAGACACTaGTTGTCCTTTAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSLCRPGWHRPQRSALLTLSRH*LSFKVQ Trigger: CTGGACCTTAAAGGACAACCAGTGTCTGCTGAGAGT...AAGGAGGGCGGATCTCTGAGGTCGATGCCAGCCTGGTCTACAGAGTGAGTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CCA 90 bp | GAGGACCTTTCTCTTGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGCTGGGAGGAGGGGATTaGAGATGGAGCAAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLSLASMYRLLQSLWTTLGGGD*RWSKSG Trigger: GCCTGACTTGCTCCATCTCCAATCCCCTCCTCCCAG...CGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CCA 90 bp | GGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATGAGACCAGGGCATTGCTCATCACGGGCTCCTaGATCCTCCTCTTCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GRNHFLGPRGYKYETRALLITGS*ILLFLI Trigger: AATCAGGAAGAGGAGGATCCAGGAGCCCGTGATGAG...CAATGCCCTGGTCTCATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTCCGCCGGAGGGGCTCTaGAGGAGACAGGCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CRDISRRTGENESSPHCGPPEGL*RRQASP Trigger: CGGACTTGCCTGTCTCCTCCAGAGCCCCTCCGGCGG...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | GGCTACAAATATGAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCTCTGTCACCTTCTCTaGGAGGAGGGGATTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYKYETRALLISLASEWHLCHLL*EEGIGD Trigger: ATCTCCAATCCCCTCCTCCCAGAGAAGGTGACAGAG...ATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTCATATTTGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| 3UTR CAA 72 bp | GGAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTaGGAGGAAAGGGTCCTTACAGAGCAGTCAAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GVRTSRICDQDH*EERVLTEQSSY Trigger: GTAACTTGACTGCTCTGTAAGGACCCTTTCCTCCAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR TCA 90 bp | ACGGCTGCAAGGAATCCAGTGTCCTGTTCTGGCCTCCACAGGTACACACACACAGGATCCTCCTCTTCCTaGTTTGTTTTATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAARNPVSCSGLHRYTHTGSSSS*FVLCSS Trigger: AGAAGAGCATAAAACAAATCAGGAAGAGGAGGATCC...TGTGTGTGTGTACCTGTGGAGGCCAGAACAGGACACTGGATTCCTTGCAGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | AACCACAACACACCCACCACTGGGCTGGATGGTCTACATACATACATACATACAAACTATGGCCAGAAGTaGGTGGGGAGGTCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHNTPTTGLDGLHTYIHTNYGQK*VGRSKD Trigger: GTCCTTGGACCTCCCCACCCACTTCTGGCCATAGTT...TGTATGTATGTATGTATGTAGACCATCCAGCCCAGTGGTGGGTGTGTTGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGAAGGGAGGGTACGACTATTATTTACTGTGCAACCACAACACACCCACCCTCATCACGGGCTCCTaGATCCTCCTCTTCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SEKGGYDYYLLCNHNTPTLITGS*ILLFLI Trigger: AATCAGGAAGAGGAGGATCCAGGAGCCCGTGATGAG...GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATCCAGAGGCAGAAGAATaGCTGCAGGGGACCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYPEAEE*LQGTRK Trigger: TTTTCTGGTCCCCTGCAGCCATTCTTCTGCCTCTGG...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR TCA 90 bp | ATGGAAGATTCTCAGGGAGCCGAGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGTTATGCTCTTCTTTGTaGCATTTCCCAAAGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MEDSQGAESWVQHLCSQVLCSSL*HFPKAQ Trigger: CTGTGCCTTTGGGAAATGTCACAAAGAAGAGCATAA...CACTTGAGAACACAAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR GCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATCCAGAAGTCAGGAGTTaGAGGAAGATGAAGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYPEVRS*RKMKLT Trigger: GGTCAGCTTCATCTTCCTGCAACTCCTGACTTCTGG...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | AGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGTCCATTAAAACCCACTTCTCATCGGATGCCTTTGTCCTaGGTGTCAGTCACACGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSSTCVLKCPLKPTSHRMPLS*VSVTRI Trigger: AATCCGTGTGACTGACACCCAGGACAAAGGCATCCG...ATGAGAAGTGGGTTTTAATGGACACTTGAGAACACAAGTGCTGGACCCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CCA 90 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTGGAACCCTAGACAGGGAACTCTCAGCAGACACTaGTTGTCCTTTAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KHKLYRVSAYLEWNPRQGTLSRH*LSFKVQ Trigger: CTGGACCTTAAAGGACAACCAGTGTCTGCTGAGAGT...TCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | AACCACAACACACCCACCACTGGGCTGGATGGTCTACATACATACATACATACACTCTGTCACCTTCTCTaGGAGGAGGGGATTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NHNTPTTGLDGLHTYIHTLCHLL*EEGIGD Trigger: ATCTCCAATCCCCTCCTCCCAGAGAAGGTGACAGAG...TGTATGTATGTATGTATGTAGACCATCCAGCCCAGTGGTGGGTGTGTTGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATAGGATGCAGGGGTCCTaGTTAAATCTCCTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYRMQGS*LNLLEL Trigger: CAGTTCCAGGAGATTTAACCAGGACCCCTGCATCCT...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CCA 90 bp | GAGGACCTTTCTCTTGCAAGCATGTATAGGCTACTACAGTCCCTATGGACAACGAACACGGTGACGTTGTaGATCTTCACAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDLSLASMYRLLQSLWTTNTVTL*IFTAAS Trigger: AGAAGCTGCTGTGAAGATCCACAACGTCACCGTGTT...CGTTGTCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CAA 72 bp | CTAGGTGACCTTTGTCTGTGTCTGAGGACCTTTCTCTaGCAAGCATGTATAGGCTACTACAGTCCCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGDLCLCLRTFL*QACIGYYSPYG Trigger: TCCATAGGGACTGTAGTAGCCTATACATGCTTGCAAGAGAAAGGTCCTCAGACACAGACAAAGGTCACCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| 3UTR CAA 72 bp | AACCAGATCAATCACACCAACAATCCCTGCTTGAACTaGCAACAAACAGCAAGAGGGAATGTTGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQINHTNNPCLN*QQTARGNVGSA Trigger: TGCAGACCCAACATTCCCTCTTGCTGTTTGTTGCAAGTTCAAGCAGGGATTGTTGGTGTGATTGATCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR TCA 90 bp | AGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGTCCATTAAAACCCACTTCTCATGGATCCTCCTCTTCCTaGTTTGTTTTATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSSTCVLKCPLKPTSHGSSSS*FVLCSS Trigger: AGAAGAGCATAAAACAAATCAGGAAGAGGAGGATCC...ATGAGAAGTGGGTTTTAATGGACACTTGAGAACACAAGTGCTGGACCCAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR TCA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATCAGGGAGCCATTGGTTaGATTATAAAAGGAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYQGAIG*IIKGDL Trigger: CAAATCTCCTTTTATAATTCAACCAATGGCTCCCTG...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGGATATATCACGTAGAACAGGAGAAAATGAAAGTTCTCCACATTGTGGTTTATGCTCTTCTTTGTaGCATTTCCCAAAGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CRDISRRTGENESSPHCGLCSSL*HFPKAQ Trigger: CTGTGCCTTTGGGAAATGTCACAAAGAAGAGCATAA...ACCACAATGTGGAGAACTTTCATTTTCTCCTGTTCTACGTGATATATCCCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS CCA 90 bp | GGGTACCAGCCTGCTGAGGTGCACTCGGCCCGGATGCCTTTGTCCTaGGTGTCAGTCACACGGATTCTGGGGGACGAGCCCCGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GYQPAEVHSARMPLS*VSVTRILGDEPRPA Trigger: GGCAGGGCGGGGCTCGTCCCCCAGAATCCGTGTGACTGACACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS GCA 90 bp | GGTCCAGCCACTCCACCTTGGGCTCGGGGTACCAGCCTGCTGAGGTaGACTCGGCCCGGATGCCTTTGTCCTGGGTGTCAGTCACACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPATPPWARGTSLLR*TRPGCLCPGCQSHG Trigger: TCCGTGTGACTGACACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTACCCCGAGCCCAAGGTGGAGTGGCTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | ATCGGATGCTATCCTCTGGCCTCTGTGGGCACCGCACCTGTGTGCGCAGACACACTCAGCAGACACTGGTaGTCCTTTAAGGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IGCYPLASVGTAPVCADTLSRHW*SFKVQP Trigger: TGGCTGGACCTTAAAGGACAACCAGTGTCTGCTGAG...TGTGTCTGCGCACACAGGTGCGGTGCCCACAGAGGCCAGAGGATAGCATCCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS TCA 90 bp | ATGGAGAGCAGGGCCACGAGGCCAGTGCTGGCTGAAACTGAGAAGTaGCTCTCAGCAGACACTGGTTGTCCTTTAAGGTCCAGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: MESRATRPVLAETEK*LSADTGCPLRSSHS Trigger: GGAGTGGCTGGACCTTAAAGGACAACCAGTGTCTGCTGAGAGTCACTTCTCAGTTTCAGCCAGCACTGGCCTCGTGGCCCTGCTCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
||
| CDS-3UTR CAA 90 bp | AAGATTCTCAGGGAGCCGAGAGCTGGGTCCAGCACTTGTGTTCTCAAGTGTCCAACGACTGACGAGGGCTaGTCCCTGTACCACCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KILREPRAGSSTCVLKCPTTDEG*SLYHLS Trigger: GCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGT...TGGACACTTGAGAACACAAGTGCTGGACCCAGCTCTCGGCTCCCTGAGAATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
||
| CDS GCA 90 bp | TTGAATTATAAAAGGAGATTTGCCCTGCCTCAAAGTCTAAGAGGATaGCCACCCGCCGGAGGGGCTCTGGAGGAGACAGGCAAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LNYKRRFALPQSLRG*PPAGGALEETGKSG Trigger: CCCGGACTTGCCTGTCTCCTCCAGAGCCCCTCCGGCGGGTGGGCATCCTCTTAGACTTTGAGGCAGGGCAAATCTCCTTTTATAATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
||
| CDS CCA 90 bp | TATCCTGGGGAGTCACAATGGAGAGCAGGGCCACGAGGCCAGTGCTaGCTGAAACTGAGAAGTGACTCTCAGCAGACACTGGTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPGESQWRAGPRGQC*LKLRSDSQQTLVVL Trigger: AAGGACAACCAGTGTCTGCTGAGAGTCACTTCTCAGTTTCAGCCAGCACTGGCCTCGTGGCCCTGCTCTCCATTGTGACTCCCCAGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS GCA 90 bp | TCCACCATCTGCTCGTCATACACATCCTCCCCATTCTTGTACACATaGACGACTGACGAGGGCTTGTCCCTGTACCACCTCAGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: STICSSYTSSPFLYT*TTDEGLSLYHLSSM Trigger: CATGGAGCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGAGGATGTGTATGACGAGCAGATGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATCCCTCAGCGCTGATGTaGAGTGACAGTTTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNPSALM*SDSLQG Trigger: GCCCTGCAAACTGTCACTCAACATCAGCGCTGAGGG...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | GGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATGAGACCAGGGCATTGCCCTCAGCGCTGATGTaGAGTGACAGTTTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GRNHFLGPRGYKYETRALPSALM*SDSLQG Trigger: GCCCTGCAAACTGTCACTCAACATCAGCGCTGAGGG...CAATGCCCTGGTCTCATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTGGAACCCTAGACAGGGAACGACTGACGAGGGCTaGTCCCTGTACCACCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KHKLYRVSAYLEWNPRQGTTDEG*SLYHLS Trigger: GCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGT...TCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | GGCTACAAATATGAGACCAGGGCATTGCTGATCTCCTTGGCTAGTGAGTGGCATCCATGCTGGGGTGACTaGGGGATCCTTCCTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: GYKYETRALLISLASEWHPCWGD*GILPSR Trigger: ACGGGAAGGAAGGATCCCCAAGTCACCCCAGCATGG...ATGCCACTCACTAGCCAAGGAGATCAGCAATGCCCTGGTCTCATATTTGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | CCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAATATCCATGCTGGGGTGACTaGGGGATCCTTCCTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PGFSLGRNHFLGPRGYKYPCWGD*GILPSR Trigger: ACGGGAAGGAAGGATCCCCAAGTCACCCCAGCATGG...ATATTTGTAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS GCA 90 bp | AATGTTCCCTGTGTGAGCTCCGCTCACAGATACCTTAACTACGGCTaGAAGGAATCCAGTGTCCTGTTCTGGGAGGAGGGGATTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: NVPCVSSAHRYLNYG*KESSVLFWEEGIGD Trigger: ATCTCCAATCCCCTCCTCCCAGAACAGGACACTGGATTCCTTGCAGCCGTAGTTAAGGTATCTGTGAGCGGAGCTCACACAGGGAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108818.4 |
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| CDS CCA 90 bp | TCTTCTTGTAAAACTCTAGTGCCCAGAGGCCATGCTGGGGTGACTTaGGGATCCTTCCTTCCCGTACCAAACTCTCTAGACACACACCCA | + |
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Preference number: 5 (lower is better) Translates to: SSCKTLVPRGHAGVT*GSFLPVPNSLDTHP Trigger: TGGGTGTGTGTCTAGAGAGTTTGGTACGGGAAGGAAGGATCCCCAAGTCACCCCAGCATGGCCTCTGGGCACTAGAGTTTTACAAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | TCCCCCAAATATGTGGGAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTTGCAAAGGCACAGGCTATaGCTGCTGAAACCAGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: SPKYVGVRTSRICDQDHLQRHRL*LLKPAL Trigger: TAGGGCTGGTTTCAGCAGCAATAGCCTGTGCCTTTG...CAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CAA 90 bp | GAGATTCCCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTACAAAGGCACAGGCTATaGCTGCTGAAACCAGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: EIPRILTWQEPLSRSQRLQRHRL*LLKPAL Trigger: TAGGGCTGGTTTCAGCAGCAATAGCCTGTGCCTTTG...TAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCAGAAATCCCTGACCCTGGTGGGTGGTGTCAGCATTTGGCACAGAAATTCAGACACCATGAGTTaGGGACTGGCGGTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLQKSLTLVGGVSIWHRNSDTMS*GLAVSG Trigger: TCCTGAAACCGCCAGTCCCAAACTCATGGTGTCTGA...ATTTCTGTGCCAAATGCTGACACCACCCACCAGGGTCAGGGATTTCTGAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | GAGATTCCCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTATCAGACACCATGAGTTaGGGACTGGCGGTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EIPRILTWQEPLSRSQRLSDTMS*GLAVSG Trigger: TCCTGAAACCGCCAGTCCCAAACTCATGGTGTCTGA...TAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | TCAAACTCACTCTGTAGACCAGGCTGGCATCGACCTCAGAGATCCGCCCTCCTTGGGGTAGGAGAGGGCTaGGAGTTTCTTCTTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SNSLCRPGWHRPQRSALLGVGEG*EFLLVK Trigger: TTTTACAAGAAGAAACTCCAAGCCCTCTCCTACCCC...AAGGAGGGCGGATCTCTGAGGTCGATGCCAGCCTGGTCTACAGAGTGAGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS TCA 90 bp | AACTATGGCCAGAAGTGGGTGGGGAGGTCCAAGGACGAGGAAATCTaGTTTTCCGTTCCCAGAAGTCAGGAGTTGCAGGAAGATGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NYGQKWVGRSKDEEI*FSVPRSQELQEDEA Trigger: AGCTTCATCTTCCTGCAACTCCTGACTTCTGGGAACGGAAAATCAGATTTCCTCGTCCTTGGACCTCCCCACCCACTTCTGGCCATAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | GAGATTCCCAGGATTCTCACTTGGCAGGAACCACTTTCTAGGTCCCAGAGGCTAGAAGATTCTGTGTCTTaGGTCTCTGTGACCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EIPRILTWQEPLSRSQRLEDSVS*VSVTTE Trigger: CTCGGTGGTCACAGAGACCAAAGACACAGAATCTTC...TAGCCTCTGGGACCTAGAAAGTGGTTCCTGCCAAGTGAGAATCCTGGGAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS GCA 90 bp | CCAAGGACGAGGAAATCTGATTTTCCGTTCCCAGAAGTCAGGAGTTaGAGGAAGATGAAGCTGACCAAGATGCTTGGCAGAGTAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PRTRKSDFPFPEVRS*RKMKLTKMLGRVAS Trigger: AGATGCTACTCTGCCAAGCATCTTGGTCAGCTTCATCTTCCTGCAACTCCTGACTTCTGGGAACGGAAAATCAGATTTCCTCGTCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGAAGGGAGGGTACGACTATTATTTACTGTGCAACCACAACACACCCACCGAAGATTCTGTGTCTTaGGTCTCTGTGACCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEKGGYDYYLLCNHNTPTEDSVS*VSVTTE Trigger: CTCGGTGGTCACAGAGACCAAAGACACAGAATCTTC...GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGAAGGGAGGGTACGACTATTATTTACTGTGCAACCACAACACACCCACCGGGGTAGGAGAGGGCTaGGAGTTTCTTCTTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEKGGYDYYLLCNHNTPTGVGEG*EFLLVK Trigger: TTTTACAAGAAGAAACTCCAAGCCCTCTCCTACCCC...GGTGGGTGTGTTGTGGTTGCACAGTAAATAATAGTCGTACCCTCCCTTCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS-3UTR CAA 90 bp | TCCCCCAAATATGTGGGAGTCAGGACCTCTCGCATCTGTGACCAGGATCATTTGTCAGGGAGCCATTGGTaGAATTATAAAAGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SPKYVGVRTSRICDQDHLSGSHW*NYKRRF Trigger: AAATCTCCTTTTATAATTCAACCAATGGCTCCCTGA...CAAATGATCCTGGTCACAGATGCGAGAGGTCCTGACTCCCACATATTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069941.13 |
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| CDS-3UTR CAA 90 bp | AAACACAAACTCTACAGGGTCAGTGCCTACCTAGAGTGGAACCCTAGACAGGGATCAGGGAGCCATTGGTaGAATTATAAAAGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: KHKLYRVSAYLEWNPRQGSGSHW*NYKRRF Trigger: AAATCTCCTTTTATAATTCAACCAATGGCTCCCTGA...TCCCTGTCTAGGGTTCCACTCTAGGTAGGCACTGACCCTGTAGAGTTTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142499.8 |
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| CDS GCA 72 bp | GTCAGTCACACGGATTCTGGGGGACGAGCCCCGCCCTaGCACCTTCAGCCACAGGGTGGCCTGGCTGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSHTDSGGRAPP*HLQPQGGLAVG Trigger: TCCCACAGCCAGGCCACCCTGTGGCTGAAGGTGGCAGGGCGGGGCTCGTCCCCCAGAATCCGTGTGACTGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | CAGCCACTCCACCTTGGGCTCGGGGTACCAGCCTGCTaGGGTGCACTCGGCCCGGATGCCTTTGTCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QPLHLGLGVPAC*GALGPDAFVLG Trigger: ACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTACCCCGAGCCCAAGGTGGAGTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS GCA 72 bp | ACTCCACCTTGGGCTCGGGGTACCAGCCTGCTGAGGTaGACTCGGCCCGGATGCCTTTGTCCTGGGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPPWARGTSLLR*TRPGCLCPGCQ Trigger: CTGACACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTACCCCGAGCCCAAGGTGGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS GCA 72 bp | CGGGGTACCAGCCTGCTGAGGTGCACTCGGCCCGGATaGCTTTGTCCTGGGTGTCAGTCACACGGATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGTSLLRCTRPG*LCPGCQSHGFW Trigger: CCAGAATCCGTGTGACTGACACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTACCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CCA 72 bp | GGATGCCTTTGTCCTGGGTGTCAGTCACACGGATTCTaGGGGACGAGCCCCGCCCTGCCACCTTCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GCLCPGCQSHGF*GTSPALPPSAT Trigger: TGTGGCTGAAGGTGGCAGGGCGGGGCTCGTCCCCCAGAATCCGTGTGACTGACACCCAGGACAAAGGCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CAA 72 bp | TACCAGCCTGCTGAGGTGCACTCGGCCCGGATGCCTTaGTCCTGGGTGTCAGTCACACGGATTCTGGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YQPAEVHSARMP*SWVSVTRILGD Trigger: GTCCCCCAGAATCCGTGTGACTGACACCCAGGACAAAGGCATCCGGGCCGAGTGCACCTCAGCAGGCTGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS GCA 72 bp | AAAAGGAGATTTGCCCTGCCTCAAAGTCTAAGAGGATaGCCACCCGCCGGAGGGGCTCTGGAGGAGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRRFALPQSLRG*PPAGGALEETG Trigger: GCCTGTCTCCTCCAGAGCCCCTCCGGCGGGTGGGCATCCTCTTAGACTTTGAGGCAGGGCAAATCTCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS CAA 72 bp | TCCCCATTCTTGTACACATGCACGACTGACGAGGGCTaGTCCCTGTACCACCTCAGCTCCATGCCCTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SPFLYTCTTDEG*SLYHLSSMPSA Trigger: CGCTGAGGGCATGGAGCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CAA 72 bp | CCAGGGAGGCCGGGATCTCCAGAAGATTCTGTGTCTTaGGTCTCTGTGACCACCGAGCAGATGGTGAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGRPGSPEDSVS*VSVTTEQMVRG Trigger: ACCCCTCACCATCTGCTCGGTGGTCACAGAGACCAAAGACACAGAATCTTCTGGAGATCCCGGCCTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS CCA 72 bp | GAGTCACAATGGAGAGCAGGGCCACGAGGCCAGTGCTaGCTGAAACTGAGAAGTGACTCTCAGCAGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: ESQWRAGPRGQC*LKLRSDSQQTL Trigger: CAGTGTCTGCTGAGAGTCACTTCTCAGTTTCAGCCAGCACTGGCCTCGTGGCCCTGCTCTCCATTGTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CAA 90 bp | TACACATCCTCCCCATTCTTGTACACATGCACGACTGACGAGGGCTaGTCCCTGTACCACCTCAGCTCCATGCCCTCAGCGCTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YTSSPFLYTCTTDEG*SLYHLSSMPSALML Trigger: CAACATCAGCGCTGAGGGCATGGAGCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGAGGATGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | GCAGCCGCTTCACGCTTTTCTGATCCTCAGACACCATaGGTTTGGGACTGGCGGTTTCAGGATCCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AAASRFSDPQTP*VWDWRFQDPGT Trigger: TGTCCCTGGATCCTGAAACCGCCAGTCCCAAACTCATGGTGTCTGAGGATCAGAAAAGCGTGAAGCGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS GCA 72 bp | TGTGTGAGCTCCGCTCACAGATACCTTAACTACGGCTaGAAGGAATCCAGTGTCCTTCTCTGGGAGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVSSAHRYLNYG*KESSVLLWEEG Trigger: CCCCTCCTCCCAGAGAAGGACACTGGATTCCTTGCAGCCGTAGTTAAGGTATCTGTGAGCGGAGCTCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020792.12 |
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| CDS CCA 72 bp | CAGGAGTTGCAGGAAGATGAAGCTGACCAAGATGCTTaGCAGAGTAGCATCTCCAGGGTGTGCCCTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QELQEDEADQDA*QSSISRVCPCH Trigger: ATGGCAAGGGCACACCCTGGAGATGCTACTCTGCCAAGCATCTTGGTCAGCTTCATCTTCCTGCAACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CCA 72 bp | AAAACTCTAGTGCCCAGAGGCCATGCTGGGGTGACTTaGGGATCCTTCCTTCCCGTACCAAACTCTCTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: KTLVPRGHAGVT*GSFLPVPNSLD Trigger: GTCTAGAGAGTTTGGTACGGGAAGGAAGGATCCCCAAGTCACCCCAGCATGGCCTCTGGGCACTAGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS CAA 72 bp | TCCACCATCTGCTCGTCATACACATCCTCCCCATTCTaGTACACATGCACGACTGACGAGGGCTTGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: STICSSYTSSPF*YTCTTDEGLSL Trigger: CAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGAGGATGTGTATGACGAGCAGATGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | CAGAAGTGGGTGGGGAGGTCCAAGGACGAGGAAATCTaGTTTTCCGTTCCCAGAAGTCAGGAGTTGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QKWVGRSKDEEI*FSVPRSQELQE Trigger: TTCCTGCAACTCCTGACTTCTGGGAACGGAAAATCAGATTTCCTCGTCCTTGGACCTCCCCACCCACTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | ATACACATCCTCCCCATTCTTGTACACATGCACGACTaGCGAGGGCTTGTCCCTGTACCACCTCAGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IHILPILVHMHD*RGLVPVPPQLH Trigger: ATGGAGCTGAGGTGGTACAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGAGGATGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS CAA 90 bp | CCCTTATATTCCACCATCTGCTCGTCATACACATCCTCCCCATTCTaGTACACATGCACGACTGACGAGGGCTTGTCCCTGTACCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLYSTICSSYTSSPF*YTCTTDEGLSLYHL Trigger: GAGGTGGTACAGGGACAAGCCCTCGTCAGTCGTGCATGTGTACAAGAATGGGGAGGATGTGTATGACGAGCAGATGGTGGAATATAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | ATGTTGAGTGACAGTTTGCAGGGCAACTCTTTGTCTTaGCCAACTATGGCCAGAAGTGGGTGGGGAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MLSDSLQGNSLS*PTMARSGWGGP Trigger: TGGACCTCCCCACCCACTTCTGGCCATAGTTGGTCAAGACAAAGAGTTGCCCTGCAAACTGTCACTCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020792.12 ENSMUST00000069941.13 ENSMUST00000108818.4 ENSMUST00000142499.8 |
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| CDS TCA 72 bp | GAACCCAGAGAACACATAGATCAGGGAGCCATTGGTTaGATTATAAAAGGAGATTTGCCCTGCCTCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EPREHIDQGAIG*IIKGDLPCLKV Trigger: GACTTTGAGGCAGGGCAAATCTCCTTTTATAATTCAACCAATGGCTCCCTGATCTATGTGTTCTCTGGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS CCA 72 bp | AGGAGAACCCAGAGAACACATAGATCAGGGAGCCATTaGTTGAATTATAAAAGGAGATTTGCCCTGCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRTQRTHRSGSH*LNYKRRFALPQ Trigger: TTGAGGCAGGGCAAATCTCCTTTTATAATTCAACCAATGGCTCCCTGATCTATGTGTTCTCTGGGTTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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| CDS CAA 72 bp | AGAACCCAGAGAACACATAGATCAGGGAGCCATTGGTaGAATTATAAAAGGAGATTTGCCCTGCCTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTQRTHRSGSHW*NYKRRFALPQS Trigger: ACTTTGAGGCAGGGCAAATCTCCTTTTATAATTCAACCAATGGCTCCCTGATCTATGTGTTCTCTGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069941.13 ENSMUST00000142499.8 |
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