Pregenerated sensors for BTNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062638Ensembl transcript IDs: ENSMUST00000080254.7
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCGCAGCACCCACCCATTaGATTCCCTGTGCACATCAC | + |
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Preference number: 2 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGAAPTH*IPCAHH Trigger: GTGATGTGCACAGGGAATTCAATGGGTGGGTGCTGC...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| 3UTR GCA 72 bp | TCAAAAGAAGGAAGGCTATTAATAACTATAACACCATaGACGACACAGATGGTCCGAGAATCTTGTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SKEGRLLITITP*TTQMVRESCPG Trigger: TCCTGGACAAGATTCTCGGACCATCTGTGTCGTGCATGGTGTTATAGTTATTAATAGCCTTCCTTCTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCGAGGAGACAACCAGCTaGAGGGACGGAGGGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLEETTS*RDGGGA Trigger: GGCTCCCCCTCCGTCCCTCCAGCTGGTTGTCTCCTC...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTACAGCAGGGGTGGGCTaGGCACGGTACCATCGGATG | + |
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Preference number: 4 (lower is better) Translates to: WSENLVQDLIPEAHGVSGTAGVG*ARYHRM Trigger: CATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGT...ACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | ACACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCCAGCACAGCAGGGGTaGGCTGGGCACGGTACCATC | + |
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Preference number: 4 (lower is better) Translates to: TQMVRESCPGSDPRGSWSPAQQG*AGHGTI Trigger: GATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGG...ACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCTGCTCCTGTCCGTTGTaGAACACCAGCACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLCSCPL*NTSTAG Trigger: CCCTGCTGTGCTGGTGTTCCACAACGGACAGGAGCA...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCCTCACAGGAGCCTCCTaGAACAGCTCCTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLLTGAS*NSSFLQ Trigger: CTGGAGGAAGGAGCTGTTCCAGGAGGCTCCTGTGAG...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCTCAGAGGCCTGGACCTaGTGTATCTGCAGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLSEAWT*CICRAT Trigger: TGTGGCTCTGCAGATACAGCAGGTCCAGGCCTCTGA...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCGCTTGTCTCACCATCTaGGTCCTGCCCCTGTATTCC | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLACLTI*VLPLYS Trigger: GGAATACAGGGGCAGGACCCAGATGGTGAGACAAGC...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCGCTCTGGGAGGAGGATaGCCTTCGATTTCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: HRWSENLVQDLIPEAHGVALGGG*PSISPG Trigger: ACCAGGAGAAATCGAAGGCCATCCTCCTCCCAGAGC...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCACTCCTCTGTGTCCTTaGCATCCACCTCCCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRWSENLVQDLIPEAHGVTPLCP*HPPPSS Trigger: ACTACTGGGAGGTGGATGTCAAGGACACAGAGGAGT...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | TGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTCAAGGGGTCTGTAAGTaGTGCATCCTGAGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSENLVQDLIPEAHGVSGQGVCK*CILSAQ Trigger: CTGTGCACTCAGGATGCATCACTTACAGACCCCTTG...ACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | ACACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTGTATTCCGGCATCTaGACCTCTCCCTGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TQMVRESCPGSDPRGSWSLYSGI*TSPCSC Trigger: ACAGGAGCAGGGAGAGGTGCAGATGCCGGAATACAG...ACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCAGCCCTTCTCTGTCTTaGGTCTGCAACTCAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLSPSLS*VCNSEE Trigger: CTCCTCTGAGTTGCAGACCCAAGACAGAGAAGGGCT...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCGCAGGACCAATAGTATaGGGACAGAACAAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRWSENLVQDLIPEAHGVAGPIV*GQNKPG Trigger: CCCTGGTTTGTTCTGTCCTCATACTATTGGTCCTGC...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCGTTGTGGTCTACTTGTaGGCTGCTGACAGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGVVVYL*AADSLL Trigger: GAGGAGACTGTCAGCAGCTCACAAGTAGACCACAAC...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | CAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCGAAGTAAGGATAGGGTaGTCCCAAGAAAGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMVRESCPGSDPRGSWSLEVRIG*SQERDL Trigger: CAGGTCCCTTTCTTGGGATCACCCTATCCTTACTTC...GAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTTAGGGCTGTGCTGTTaGAGAGAGCCCCATGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HRWSENLVQDLIPEAHGVLGLCC*REPHGI Trigger: AATTCCATGGGGCTCTCTGCAACAGCACAGCCCTAA...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCTCCATGGAGACCTCTTaGGAGGTGAAGCCATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QMVRESCPGSDPRGSWSLSMETS*EVKPSV Trigger: TACAGATGGCTTCACCTCCCAAGAGGTCTCCATGGA...GAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCCAGGGCTACTTTCCATaGACACGTCTTGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLQGYFP*TRLGEE Trigger: TTCTTCCCCAAGACGTGTCCATGGAAAGTAGCCCTG...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | ACACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTAGTATCTTCCCAACATaGAGCCTTCCTGGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQMVRESCPGSDPRGSWSSIFPT*SLPGRV Trigger: CACTCTCCCAGGAAGGCTTCATGTTGGGAAGATACT...ACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | TGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTCTTTTCCAGGACTCTaGATTTCCTCAAGGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSENLVQDLIPEAHGVSGSFPGL*ISSRGL Trigger: CAGACCCCTTGAGGAAATTCAGAGTCCTGGAAAAGA...ACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCATCTCTGTCTTGGGTCTaGAACTCAGAGGAGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: RWSENLVQDLIPEAHGVSSLSWV*NSEEDS Trigger: ACTGTCCTCCTCTGAGTTGCAGACCCAAGACAGAGA...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAAGTGATGGGCTCAGCTaGTCCCTTCACAGAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RWSENLVQDLIPEAHGVSSDGLS*SLHRKP Trigger: TGGTTTTCTGTGAAGGGACCAGCTGAGCCCATCACT...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCAGAGACACTTCCACCTaGAAGAGCCCTTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGRDTST*KSPSLS Trigger: AGACAGAGAAGGGCTCTTCCAGGTGGAAGTGTCTCT...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAACATGAAGCCTTCCTaGGAGAGTGTGATGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QMVRESCPGSDPRGSWSLNMKPS*ESVMRL Trigger: CAACCTCATCACACTCTCCCAGGAAGGCTTCATGTT...GAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTCTCCTGGTCATACATaGGATTTTGGATGGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WSENLVQDLIPEAHGVSGSPGHT*DFGWSR Trigger: TCTGCTCCATCCAAAATCCCATGTATGACCAGGAGA...ACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCCCAAGAAAGGGACCTaGGCAAAGGAAAAGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGPKKGT*AKEKMC Trigger: ACACATCTTTTCCTTTGCCCAGGTCCCTTTCTTGGG...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCACCTGGAGGTCATCTCTaGTCTTCAGTACAGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: RWSENLVQDLIPEAHGVSPGGHL*SSVQIL Trigger: CAAAATCTGTACTGAAGATCAGAGATGACCTCCAGG...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGTGATGCATCCTGAGTaGACAGCTCATAAACTCCTA | + |
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Preference number: 4 (lower is better) Translates to: RWSENLVQDLIPEAHGVSVMHPE*TAHKLL Trigger: TAGGAGTTTATGAGCTGTGCACTCAGGATGCATCAC...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR GCA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCGGACGTGTCTTCAGTTaGAGAGGTTCTTCCGAATTA | + |
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Preference number: 4 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGGRVFS*RGSSEL Trigger: TAATTCGGAAGAACCTCTGCAACTGAAGACACGTCC...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCCTCACATGGGATTTTGGATaGAGCAGATCACATTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SCPGSDPRGSWSLRLRGLTWDFG*SRSHCQ Trigger: TTGGCAATGTGATCTGCTCCATCCAAAATCCCATGT...GAGGCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCTCCGAATTAATGTTTTaGGAACAGAAGTCAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QMVRESCPGSDPRGSWSLSELMF*EQKSRA Trigger: GGCTCTTGACTTCTGTTCCCAAAACATTAATTCGGA...GAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR TCA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCATCTCTCCTTTTGACTTaGTGTTCTTTCCAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: RWSENLVQDLIPEAHGVSSLLLT*CSFQIP Trigger: TGGAATCTGGAAAGAACATCAAGTCAAAAGGAGAGA...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CCA 90 bp | ACACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTTCATACATGGGATTTTaGATGGAGCAGATCACATTG | + |
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Preference number: 4 (lower is better) Translates to: TQMVRESCPGSDPRGSWSSYMGF*MEQITL Trigger: CAATGTGATCTGCTCCATCCAAAATCCCATGTATGA...ACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | CCAGCACAGCAGGGGTGGGCTGGGCACGGTACCATCGGATGTGCATaGGAGCTGCACTCTGTTCAGGAGACAGCTGGCAGGGCAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PAQQGWAGHGTIGCA*ELHSVQETAGRAGW Trigger: CCACCCTGCCCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | AGCAGGGGTGGGCTGGGCACGGTACCATCGGATGTGCATGCGAGCTaGACTCTGTTCAGGAGACAGCTGGCAGGGCAGGGTGGCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SRGGLGTVPSDVHAS*TLFRRQLAGQGGFS Trigger: ACTGAAGCCACCCTGCCCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | AACACCAGCACAGCAGGGGTGGGCTGGGCACGGTACCATCGGATGTaGATGCGAGCTGCACTCTGTTCAGGAGACAGCTGGCAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NTSTAGVGWARYHRM*MRAALCSGDSWQGR Trigger: CCTGCCCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | CCTCTCCCTGCTCCTGTCCGTTGTGGAACACCAGCACAGCAGGGGTaGGCTGGGCACGGTACCATCGGATGTGCATGCGAGCTGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: PLPAPVRCGTPAQQG*AGHGTIGCACELHS Trigger: AGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGGTGTTCCACAACGGACAGGAGCAGGGAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | CCCTGCTCCTGTCCGTTGTGGAACACCAGCACAGCAGGGGTGGGCTaGGCACGGTACCATCGGATGTGCATGCGAGCTGCACTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PCSCPLWNTSTAGVG*ARYHRMCMRAALCS Trigger: TGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGGTGTTCCACAACGGACAGGAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | GAGCCACACTTCCCATGTCAATGGCTTGTCTCACCATCTGGGTCCTaGCCCTGTATTCCGGCATCTGCACCTCTCCCTGCTCCTGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: EPHFPCQWLVSPSGS*PCIPASAPLPAPVR Trigger: ACGGACAGGAGCAGGGAGAGGTGCAGATGCCGGAATACAGGGGCAGGACCCAGATGGTGAGACAAGCCATTGACATGGGAAGTGTGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | ATCTGCAGAGCCACACTTCCCATGTCAATGGCTTGTCTCACCATCTaGGTCCTGCCCCTGTATTCCGGCATCTGCACCTCTCCCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ICRATLPMSMACLTI*VLPLYSGICTSPCS Trigger: GGAGCAGGGAGAGGTGCAGATGCCGGAATACAGGGGCAGGACCCAGATGGTGAGACAAGCCATTGACATGGGAAGTGTGGCTCTGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCCTCCATGGAGACCTCTaGGGAGGTGAAGCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: HRWSENLVQDLIPEAHGVLHGDL*GGEAIC Trigger: ACAGATGGCTTCACCTCCCAAGAGGTCTCCATGGAG...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | TGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTGAGCCCTTCTCTGTCTaGGGTCTGCAACTCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: WSENLVQDLIPEAHGVSGEPFSV*GLQLRG Trigger: TCCTCTGAGTTGCAGACCCAAGACAGAGAAGGGCTC...ACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | GTGACCAAAAGAGACACTTCCACCTGGAAGAGCCCTTCTCTGTCTTaGGTCTGCAACTCAGAGGAGGACAGTAGCATGTTCCCGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VTKRDTSTWKSPSLS*VCNSEEDSSMFPEV Trigger: CACCTCCGGGAACATGCTACTGTCCTCCTCTGAGTTGCAGACCCAAGACAGAGAAGGGCTCTTCCAGGTGGAAGTGTCTCTTTTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | AAAAGAGACACTTCCACCTGGAAGAGCCCTTCTCTGTCTTGGGTCTaGAACTCAGAGGAGGACAGTAGCATGTTCCCGGAGGTGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: KRDTSTWKSPSLSWV*NSEEDSSMFPEVSL Trigger: GAGAGACACCTCCGGGAACATGCTACTGTCCTCCTCTGAGTTGCAGACCCAAGACAGAGAAGGGCTCTTCCAGGTGGAAGTGTCTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | AACCAGGGCTACTTTCCATGGACACGTCTTGGGGAAGAAGGGCTCTaGGAGGAGGATGGCCTTCGATTTCTCCTGGTCATACATGGGATT | + |
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Preference number: 5 (lower is better) Translates to: NQGYFPWTRLGEEGL*EEDGLRFLLVIHGI Trigger: AATCCCATGTATGACCAGGAGAAATCGAAGGCCATCCTCCTCCCAGAGCCCTTCTTCCCCAAGACGTGTCCATGGAAAGTAGCCCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | CACAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTTCTTCCAGTCTTCTTaGTACAGCGCCTTCCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: HRWSENLVQDLIPEAHGVFFQSS*YSAFLR Trigger: TCGGAGGAAGGCGCTGTACAAAGAAGACTGGAAGAA...GACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 90 bp | AACTCAGAGGAGGACAGTAGCATGTTCCCGGAGGTGTCTCTCCATTaGACTTTGGGTTTTGGGAACCAGCCACTTGAGGAGCACAACACT | + |
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Preference number: 5 (lower is better) Translates to: NSEEDSSMFPEVSLH*TLGFGNQPLEEHNT Trigger: AGTGTTGTGCTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACATGCTACTGTCCTCCTCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCGGAGGTGTCTCTCCATaGCACTTTGGGTTTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGGGVSP*HFGFWE Trigger: TTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCC...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | AGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGTCCTTGAGTCTGTCTaGTCCTGGTCAGGCATTTCA | + |
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Preference number: 5 (lower is better) Translates to: RWSENLVQDLIPEAHGVSVLESV*SWSGIS Trigger: TGAAATGCCTGACCAGGACAAGACAGACTCAAGGAC...TGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCTGTTCTCTTCTGTCCTaGAGTCTGTCTTGTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGCSLLS*SLSCPG Trigger: ACCAGGACAAGACAGACTCAAGGACAGAAGAGAACA...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | TTCCAGTCTTCTTTGTACAGCGCCTTCCTCCGATCTAGGTCGGCCTaGAGGTCATCTCTGATCTTCAGTACAGATTTTGTCCCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FQSSLYSAFLRSRSA*RSSLIFSTDFVPFF Trigger: GAAGAAGGGGACAAAATCTGTACTGAAGATCAGAGATGACCTCCAGGCCGACCTAGATCGGAGGAAGGCGCTGTACAAAGAAGACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCGTCATACATGGGATTTaGGATGGAGCAGATCACATT | + |
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Preference number: 5 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGVIHGI*DGADHI Trigger: AATGTGATCTGCTCCATCCAAAATCCCATGTATGAC...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | CAGATGGTCCGAGAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCTTCTCTCCTTTTGACTaGATGTTCTTTCCAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: QMVRESCPGSDPRGSWSLFSPFD*MFFPDS Trigger: GGAATCTGGAAAGAACATCAAGTCAAAAGGAGAGAA...GAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTCTCGGACCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 90 bp | TCATGTTGTAGAAAGAGAGGTCATTGTCTTCCTGATCCAAGAAGATaGCGATCTTCAGCGGACGTGTCTTCAGTTGCAGAGGTTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SCCRKRGHCLPDPRR*RSSADVSSVAEVLP Trigger: CGGAAGAACCTCTGCAACTGAAGACACGTCCGCTGAAGATCGCCATCTTCTTGGATCAGGAAGACAATGACCTCTCTTTCTACAACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS-3UTR CAA 90 bp | GAATCTTGTCCAGGATCTGATCCCCGAGGCTCATGGAGTCTCAGGTTAAGAGGCTTCCGAATTAATGTTTaGGGAACAGAAGTCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: ESCPGSDPRGSWSLRLRGFRINV*GTEVKS Trigger: GCTCTTGACTTCTGTTCCCAAAACATTAATTCGGAA...GCCTCTTAACCTGAGACTCCATGAGCCTCGGGGATCAGATCCTGGACAAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 72 bp | GGGCTGGGCACGGTACCATCGGATGTGCATGCGAGCTaGACTCTGTTCAGGAGACAGCTGGCAGGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GLGTVPSDVHAS*TLFRRQLAGQG Trigger: ACCCTGCCCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 72 bp | CAGGGGTGGGCTGGGCACGGTACCATCGGATGTGCATaGGAGCTGCACTCTGTTCAGGAGACAGCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGWAGHGTIGCA*ELHSVQETAGR Trigger: CCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 72 bp | ACAGCAGGGGTGGGCTGGGCACGGTACCATCGGATGTaGATGCGAGCTGCACTCTGTTCAGGAGACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TAGVGWARYHRM*MRAALCSGDSW Trigger: CCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | TGTCCGTTGTGGAACACCAGCACAGCAGGGGTGGGCTaGGCACGGTACCATCGGATGTGCATGCGAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CPLWNTSTAGVG*ARYHRMCMRAA Trigger: TGCAGCTCGCATGCACATCCGATGGTACCGTGCCCAGCCCACCCCTGCTGTGCTGGTGTTCCACAACGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | ATGTGCATGCGAGCTGCACTCTGTTCAGGAGACAGCTaGCAGGGCAGGGTGGCTTCAGTCCCCAGCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: MCMRAALCSGDS*QGRVASVPSRT Trigger: TGTCCTGCTGGGGACTGAAGCCACCCTGCCCTGCCAGCTGTCTCCTGAACAGAGTGCAGCTCGCATGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 90 bp | CTGGACCTGCTGTATCTGCAGAGCCACACTTCCCATGTCAATGGCTaGTCTCACCATCTGGGTCCTGCCCCTGTATTCCGGCATCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LDLLYLQSHTSHVNG*SHHLGPAPVFRHLH Trigger: GTGCAGATGCCGGAATACAGGGGCAGGACCCAGATGGTGAGACAAGCCATTGACATGGGAAGTGTGGCTCTGCAGATACAGCAGGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | CTGTATCTGCAGAGCCACACTTCCCATGTCAATGGCTaGTCTCACCATCTGGGTCCTGCCCCTGTATTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LYLQSHTSHVNG*SHHLGPAPVFR Trigger: CCGGAATACAGGGGCAGGACCCAGATGGTGAGACAAGCCATTGACATGGGAAGTGTGGCTCTGCAGATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 90 bp | GAGGAGGACAGTAGCATGTTCCCGGAGGTGTCTCTCCATTGCACTTaGGGTTTTGGGAACCAGCCACTTGAGGAGCACAACACTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: EEDSSMFPEVSLHCT*GFGNQPLEEHNTRI Trigger: GATCCGAGTGTTGTGCTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACATGCTACTGTCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS GCA 72 bp | GAGGACAGTAGCATGTTCCCGGAGGTGTCTCTCCATTaGACTTTGGGTTTTGGGAACCAGCCACTTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: EDSSMFPEVSLH*TLGFGNQPLEE Trigger: CTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACATGCTACTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | CCTGCTGTATCTGCAGAGCCACACTTCCCATGTCAATaGCTTGTCTCACCATCTGGGTCCTGCCCCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: PAVSAEPHFPCQ*LVSPSGSCPCI Trigger: AATACAGGGGCAGGACCCAGATGGTGAGACAAGCCATTGACATGGGAAGTGTGGCTCTGCAGATACAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | TGTTCCCGGAGGTGTCTCTCCATTGCACTTTGGGTTTaGGGAACCAGCCACTTGAGGAGCACAACACTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CSRRCLSIALWV*GTSHLRSTTLG Trigger: TCCGAGTGTTGTGCTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | GTAGCATGTTCCCGGAGGTGTCTCTCCATTGCACTTTaGGTTTTGGGAACCAGCCACTTGAGGAGCACAACA | + |
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Preference number: 6 (lower is better) Translates to: VACSRRCLSIAL*VLGTSHLRSTT Trigger: TGTTGTGCTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACATGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | AGAGACACTTCCACCTGGAAGAGCCCTTCTCTGTCTTaGGTCTGCAACTCAGAGGAGGACAGTAGCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: RDTSTWKSPSLS*VCNSEEDSSMF Trigger: GAACATGCTACTGTCCTCCTCTGAGTTGCAGACCCAAGACAGAGAAGGGCTCTTCCAGGTGGAAGTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | TACTTTCCATGGACACGTCTTGGGGAAGAAGGGCTCTaGGAGGAGGATGGCCTTCGATTTCTCCTGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: YFPWTRLGEEGL*EEDGLRFLLVI Trigger: TATGACCAGGAGAAATCGAAGGCCATCCTCCTCCCAGAGCCCTTCTTCCCCAAGACGTGTCCATGGAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | AGTAGCATGTTCCCGGAGGTGTCTCTCCATTGCACTTaGGGTTTTGGGAACCAGCCACTTGAGGAGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: SSMFPEVSLHCT*GFGNQPLEEHN Trigger: GTTGTGCTCCTCAAGTGGCTGGTTCCCAAAACCCAAAGTGCAATGGAGAGACACCTCCGGGAACATGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | CCCAACATGAAGCCTTCCTGGGAGAGTGTGATGAGGTaGTGGTCTACTTGTGAGCTGCTGACAGTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PNMKPSWESVMR*WSTCELLTVSS Trigger: TGAGGAGACTGTCAGCAGCTCACAAGTAGACCACAACCTCATCACACTCTCCCAGGAAGGCTTCATGTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS TCA 72 bp | GCTGTGCTGTTGCAGAGAGCCCCATGGAATTACGTGTaGAGTAAGGATAGGGTGATCCCAAGAAAGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: AVLLQRAPWNYV*SKDRVIPRKGP Trigger: AGGTCCCTTTCTTGGGATCACCCTATCCTTACTTCACACGTAATTCCATGGGGCTCTCTGCAACAGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | AACATGAAGCCTTCCTGGGAGAGTGTGATGAGGTTGTaGTCTACTTGTGAGCTGCTGACAGTCTCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: NMKPSWESVMRL*STCELLTVSSP Trigger: AGGTGAGGAGACTGTCAGCAGCTCACAAGTAGACCACAACCTCATCACACTCTCCCAGGAAGGCTTCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS TCA 72 bp | GAGCCCCATGGAATTACGTGTGAAGTAAGGATAGGGTaGTCCCAAGAAAGGGACCTGGGCAAAGGAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EPHGITCEVRIG*SQERDLGKGKD Trigger: ATCTTTTCCTTTGCCCAGGTCCCTTTCTTGGGATCACCCTATCCTTACTTCACACGTAATTCCATGGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | AGAAAGAGAGGTCATTGTCTTCCTGATCCAAGAAGATaGCGATCTTCAGCGGACGTGTCTTCAGTTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RKRGHCLPDPRR*RSSADVSSVAE Trigger: CTCTGCAACTGAAGACACGTCCGCTGAAGATCGCCATCTTCTTGGATCAGGAAGACAATGACCTCTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | GATGGCCTTCGATTTCTCCTGGTCATACATGGGATTTaGGATGGAGCAGATCACATTGCCAATAGCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: DGLRFLLVIHGI*DGADHIANSSI Trigger: GATAGAGCTATTGGCAATGTGATCTGCTCCATCCAAAATCCCATGTATGACCAGGAGAAATCGAAGGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CCA 72 bp | ATGGCCTTCGATTTCTCCTGGTCATACATGGGATTTTaGATGGAGCAGATCACATTGCCAATAGCTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: MAFDFSWSYMGF*MEQITLPIALS Trigger: AGATAGAGCTATTGGCAATGTGATCTGCTCCATCCAAAATCCCATGTATGACCAGGAGAAATCGAAGGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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| CDS CAA 72 bp | TGGTCATACATGGGATTTTGGATGGAGCAGATCACATaGCCAATAGCTCTATCTGTGACCAAAAGAGACACT | + |
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Preference number: 6 (lower is better) Translates to: WSYMGFWMEQIT*PIALSVTKRDT Trigger: AGTGTCTCTTTTGGTCACAGATAGAGCTATTGGCAATGTGATCTGCTCCATCCAAAATCCCATGTATGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080254.7 |
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