Pregenerated sensors for BTN2A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053216Ensembl transcript IDs: ENSMUST00000041541.11, ENSMUST00000110432.2, ENSMUST00000110433.10, ENSMUST00000223877.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTaGAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PCCSCLISTVTRAAC*NSKFSALLTLSSQE Trigger: CTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCGGAAGATGCTCCATGTaGTCTGAAGGACATGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: YPQLSHRAYPRALQSISSGRCSM*SEGHGV Trigger: GACCCCATGTCCTTCAGATCACATGGAGCATCTTCC...GGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| 3UTR-3UTR GCA 90 bp | CCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCATCTATTGTAACTCCCTGTaGCCCTGTGAATGCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: PQLSHRAYPRALQSISSIYCNSL*PCECWT Trigger: TGTCCAGCATTCACAGGGGCACAGGGAGTTACAATA...GATGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGGAAGATGCTCCATGTaGTCTGAAGGACATGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQGRCSM*SEGHGV Trigger: GACCCCATGTCCTTCAGATCACATGGAGCATCTTCC...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTTCTGAGGACTGGGCCTaGAGTATGTGTGAAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HFLLRRELYYSNSPLRLASEDWA*SMCEGG Trigger: GCCACCTTCACACATACTTCAGGCCCAGTCCTCAGA...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR CAA 90 bp | ACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTaGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TLLLLPDIHCDQSSM*KLQVFCPSHTFFSG Trigger: TCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTTCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCGGAAGATGCTCCATGTaGTCTGAAGGACATGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSSVHFLHLRPQFIFICLGRCSM*SEGHGV Trigger: GACCCCATGTCCTTCAGATCACATGGAGCATCTTCC...GAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGAAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCAAATGATGTAGTAATCTaGGGACTGGGCCTGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: IHSCHIGLTPELFSPFPPNDVVI*GLGLKY Trigger: ATACTTCAGGCCCAGTCCTCAGATTACTACATCATT...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTTGCCCCTGTGAATGCTaGACAGATGAACAGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: SVHFLHLRPQFIFICLLPCPCEC*TDEQGT Trigger: AGTCCCCTGTTCATCTGTCCAGCATTCACAGGGGCA...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAACTGTGTAGAGAGCTATaGCTTCCTTACAAGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQLCREL*LPYKAL Trigger: CAGAGCCTTGTAAGGAAGCCATAGCTCTCTACACAG...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR-3UTR TCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAAAATGATGTAGTAATCTaGGGACTGGGCCTGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: STLLLLPDIHCDQSSMLKNDVVI*GLGLKY Trigger: ATACTTCAGGCCCAGTCCTCAGATTACTACATCATT...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAATTCCTTACAAGGCTCTaGGAAATTGGTCTTGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQFLTRL*EIGLVL Trigger: TAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAA...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTAATGATGTAGTAATCTaGGGACTGGGCCTGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: HFLLRRELYYSNSPLRLANDVVI*GLGLKY Trigger: ATACTTCAGGCCCAGTCCTCAGATTACTACATCATT...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTAAACTCCAAGTTTTCTaGCCTTCTCACACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SVHFLHLRPQFIFICLLPKLQVF*PSHTFF Trigger: GAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTT...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| 3UTR CAA 90 bp | AGATATACACTCCAGACACACTATGTGATATTTAAATCTTTGGCTTaGGATATCAATGGACCATTAGCTCCTACCTATCCACAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RYTLQTHYVIFKSLA*DINGPLAPTYPQLS Trigger: TGACAGCTGTGGATAGGTAGGAGCTAATGGTCCATTGATATCCAAAGCCAAAGATTTAAATATCACATAGTGTGTCTGGAGTGTATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| 3UTR GCA 72 bp | TGTAGTTCTCACTTCTTACATCCTGATCCACCCTGTTaGTCTTGCCTGATATCCACTGTGACCAGAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: CSSHFLHPDPPC*SCLISTVTRAA Trigger: TGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAAGTGAGAACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR GCA 72 bp | TGTGACCAGAGCAGCATGTTGAAACTCCAAGTTTTCTaGCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: CDQSSMLKLQVF*PSHTFFSGESC Trigger: ACAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAACATGCTGCTCTGGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR TCA 72 bp | TCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTaGAACTCCAAGTTTTCTGCCCTTCTCACACTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SCLISTVTRAAC*NSKFSALLTLS Trigger: AGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| 3UTR CCA 72 bp | TCTAGTCTCCAACAGATGGTACTGTGTAGAGAGCTATaGCTTCCTTACAAGGCTCTGAGAAATTGGTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: SSLQQMVLCREL*LPYKALRNWSC Trigger: ACAAGACCAATTTCTCAGAGCCTTGTAAGGAAGCCATAGCTCTCTACACAGTACCATCTGTTGGAGACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR TCA 72 bp | TACTGTGTAGAGAGCTATGGCTTCCTTACAAGGCTCTaGGAAATTGGTCTTGTCTTATATAGGAATAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: YCVESYGFLTRL*EIGLVLYRNKP Trigger: TGGCTTATTCCTATATAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAAGCCATAGCTCTCTACACAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| 3UTR TCA 72 bp | TGTAGGTCTACAGATATACACTCCAGACACACTATGTaGTATTTAAATCTTTGGCTTTGGATATCAATGGAC | + |
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Preference number: 3 (lower is better) Translates to: CRSTDIHSRHTM*YLNLWLWISMD Trigger: GTCCATTGATATCCAAAGCCAAAGATTTAAATATCACATAGTGTGTCTGGAGTGTATATCTGTAGACCTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGTATTGTAACTCCCTGTGCCCCTGTGAATGCTGGACAGATGAACAGGCACAGCTCGGGGCTCTaGGTACCACCCTTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: PSGIVTPCAPVNAGQMNRHSSGL*VPPFRC Trigger: ACATCTGAAGGGTGGTACCCAGAGCCCCGAGCTGTG...CCTGTTCATCTGTCCAGCATTCACAGGGGCACAGGGAGTTACAATACCTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| CDS-3UTR TCA 90 bp | CCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCATCTCCTCTGGTCTCTCTTaGTGGCCTCTGTACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQLSHRAYPRALQSISSISSGLS*WPLYTS Trigger: GCTGGTGTACAGAGGCCATCAAGAGAGACCAGAGGA...GATGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR TCA 90 bp | GTAACTCCCTGTGCCCCTGTGAATGCTGGACAGATGAACAGGGGACTGTCATCACCAGTAATGCTTCCCTaGGGAGAAGCTTTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VTPCAPVNAGQMNRGLSSPVMLP*GEAFPA Trigger: GGCAGGGAAAGCTTCTCCTCAGGGAAGCATTACTGG...TGATGACAGTCCCCTGTTCATCTGTCCAGCATTCACAGGGGCACAGGGAGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| CDS-3UTR CCA 90 bp | CCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCATCTCCACAGAGGAAGGCTaGGCACGAAGGATTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PQLSHRAYPRALQSISSISTEEG*ARRILE Trigger: TTCCAGAATCCTTCGTGCCCAGCCTTCCTCTGTGGA...GATGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR TCA 90 bp | TGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCATCTTCGGCCACTTCTCTGGTCATCTaGCAGGAAGAGCTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: CHIGLTPELFSPFPPSSATSLVI*QEELRM Trigger: CATCCTGAGCTCTTCCTGTCAGATGACCAGAGAAGT...GGCCGAAGATGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR TCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACCAGTAATGCTTCCCTaGGGAGAAGCTTTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKPVMLP*GEAFPA Trigger: GGCAGGGAAAGCTTCTCCTCAGGGAAGCATTACTGG...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR GCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTGTGCCCCTGTGAATaGTGGACAGATGAACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKLCPCE*WTDEQG Trigger: CCCCTGTTCATCTGTCCAGCATTCACAGGGGCACAG...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | AGGAATAAGCCACCCTCAGGTATTGTAACTCCCTGTGCCCCTGTGAATGCTGGACCAGCACAAACAGGCTaGGGACCAAGAAGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RNKPPSGIVTPCAPVNAGPAQTG*GPRRRE Trigger: TTCTCTTCTTCTTGGTCCTCAGCCTGTTTGTGCTGG...TCCAGCATTCACAGGGGCACAGGGAGTTACAATACCTGAGGGTGGCTTATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| CDS-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAACCAGTAATGCTTCCCTaGGGAGAAGCTTTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQPVMLP*GEAFPA Trigger: GGCAGGGAAAGCTTCTCCTCAGGGAAGCATTACTGG...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGGTCTCAGGGGCCCAGTaGAAGTCACAGGAGGACATG | + |
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Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELVSGAQ*KSQEDM Trigger: CATGTCCTCCTGTGACTTTCACTGGGCCCCTGAGAC...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTGTCTCAGGGGCCCAGTaGAAGTCACAGGAGGACATG | + |
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Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVVSGAQ*KSQEDM Trigger: CATGTCCTCCTGTGACTTTCACTGGGCCCCTGAGAC...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGTCTCAGGGGCCCAGTaGAAGTCACAGGAGGACATG | + |
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Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAVSGAQ*KSQEDM Trigger: CATGTCCTCCTGTGACTTTCACTGGGCCCCTGAGAC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR GCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGATCTGTACACCAGCACTaGAGGGAAGAAACGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRSVHQH*REETPP Trigger: CGGTGGCGTTTCTTCCCTGCAGTGCTGGTGTACAGA...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CCA 90 bp | AGGAATAAGCCACCCTCAGGTATTGTAACTCCCTGTGCCCCTGTGAATGCTGGACAGGATGGGCTCAGCTaGTCCTATGACAGTAAACTG | + |
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Preference number: 4 (lower is better) Translates to: RNKPPSGIVTPCAPVNAGQDGLS*SYDSKL Trigger: CAGTTTACTGTCATAGGACCAGCTGAGCCCATCCTG...TCCAGCATTCACAGGGGCACAGGGAGTTACAATACCTGAGGGTGGCTTATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
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| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTCACAGCTCGGGGCTCTaGGTACCACCCTTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAHSSGL*VPPFRC Trigger: ACATCTGAAGGGTGGTACCCAGAGCCCCGAGCTGTG...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTCACAGCTCGGGGCTCTaGGTACCACCCTTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVHSSGL*VPPFRC Trigger: ACATCTGAAGGGTGGTACCCAGAGCCCCGAGCTGTG...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTCCAGTAATGCTTCCCTaGGGAGAAGCTTTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAPVMLP*GEAFPA Trigger: GGCAGGGAAAGCTTCTCCTCAGGGAAGCATTACTGG...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR TCA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCAGCTCTTTCAGAGGTATaGTCTTTTCTGGGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: IHSCHIGLTPELFSPFPPALSEV*SFLGRT Trigger: TGTCCTCCCCAGAAAAGATCATACCTCTGAAAGAGC...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR GCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTTCTGTACACCAGCACTaGAGGGAAGAAACGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLASVHQH*REETPP Trigger: CGGTGGCGTTTCTTCCCTGCAGTGCTGGTGTACAGA...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR GCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTCTGTGCCCCTGTGAATaGTGGACAGATGAACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVLCPCE*WTDEQG Trigger: CCCCTGTTCATCTGTCCAGCATTCACAGGGGCACAG...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CCA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCACCTATGACAGTAAACTaGGCTGAGACCAGCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: IHSCHIGLTPELFSPFPPPMTVN*AETSTN Trigger: GTTTGTGCTGGTCTCAGCCCAGTTTACTGTCATAGG...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR CCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACACCATCTGCTCCTCTaGTCTCTCTTGATGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRHHLLL*SLLMAS Trigger: AGAGGCCATCAAGAGAGACCAGAGGAGCAGATGGTG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAATCCACAGAGGAAGGCTaGGCACGAAGGATTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQSTEEG*ARRILE Trigger: TTCCAGAATCCTTCGTGCCCAGCCTTCCTCTGTGGA...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGACAGGGCTCGATACTaGCTTCCAAACATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRDRARY*LPNISR Trigger: CCTGGAGATGTTTGGAAGCCAGTATCGAGCCCTGTC...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCAAGGTATGATCTTTTCTaGGGAGGACAGGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: IHSCHIGLTPELFSPFPPRYDLF*GGQGSI Trigger: TATCGAGCCCTGTCCTCCCCAGAAAAGATCATACCT...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACCAGCACAAACAGGCTaGGGACCAAGAAGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRPAQTG*GPRRRE Trigger: TTCTCTTCTTCTTGGTCCTCAGCCTGTTTGTGCTGG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAACCAGCACAAACAGGCTaGGGACCAAGAAGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQPAQTG*GPRRRE Trigger: TTCTCTTCTTCTTGGTCCTCAGCCTGTTTGTGCTGG...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCACGAAGGATTCTGGAATaGGAATCACACTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSCHIGLTPELFSPFPPRRILE*ESHFPP Trigger: AGGTGGAAAGTGTGATTCTCATTCCAGAATCCTTCG...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAACTTCTCTGGTCATCTaGCAGGAAGAGCTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQTSLVI*QEELRM Trigger: CATCCTGAGCTCTTCCTGTCAGATGACCAGAGAAGT...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTTCTGTACACCAGCACTaGAGGGAAGAAACGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SVHFLHLRPQFIFICLLPSVHQH*REETPP Trigger: CGGTGGCGTTTCTTCCCTGCAGTGCTGGTGTACAGA...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR GCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACTCAGAGCCAAGGCTTaGCACCATAAGCTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRLRAKA*HHKLHG Trigger: ACCATGAAGCTTATGGTGGCAAGCCTTGGCTCTGAG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTCTGTGCCCCTGTGAATaGTGGACAGATGAACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVHFLHLRPQFIFICLLPLCPCE*WTDEQG Trigger: CCCCTGTTCATCTGTCCAGCATTCACAGGGGCACAG...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110433.10 |
||
| CDS-3UTR GCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAATATTGTAACTCCCTGTaGCCCTGTGAATGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKYCNSL*PCECWT Trigger: TGTCCAGCATTCACAGGGGCACAGGGAGTTACAATA...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACAGGATGGGCTCAGCTaGTCCTATGACAGTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRQDGLS*SYDSKL Trigger: CAGTTTACTGTCATAGGACCAGCTGAGCCCATCCTG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTCACCATCTGCTCCTCTaGTCTCTCTTGATGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAHHLLL*SLLMAS Trigger: AGAGGCCATCAAGAGAGACCAGAGGAGCAGATGGTG...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGCACCATCTGCTCCTCTaGTCTCTCTTGATGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELHHLLL*SLLMAS Trigger: AGAGGCCATCAAGAGAGACCAGAGGAGCAGATGGTG...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTTCCACAGAGGAAGGCTaGGCACGAAGGATTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVSTEEG*ARRILE Trigger: TTCCAGAATCCTTCGTGCCCAGCCTTCCTCTGTGGA...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGACAGGGCTCGATACTaGCTTCCAAACATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLADRARY*LPNISR Trigger: CCTGGAGATGTTTGGAAGCCAGTATCGAGCCCTGTC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAAAGGTATGATCTTTTCTaGGGAGGACAGGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKRYDLF*GGQGSI Trigger: TATCGAGCCCTGTCCTCCCCAGAAAAGATCATACCT...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTTGCCCCTGTGAATGCTaGACAGATGAACAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLACPCEC*TDEQGT Trigger: AGTCCCCTGTTCATCTGTCCAGCATTCACAGGGGCA...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGCCAGCACAAACAGGCTaGGGACCAAGAAGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELPAQTG*GPRRRE Trigger: TTCTCTTCTTCTTGGTCCTCAGCCTGTTTGTGCTGG...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGACTTCTCTGGTCATCTaGCAGGAAGAGCTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELTSLVI*QEELRM Trigger: CATCCTGAGCTCTTCCTGTCAGATGACCAGAGAAGT...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGGACGTCTGAGCCAGCTTACATCCAGTTCATCACTATGATTGTTTCCTCTCTCAGAGCCAAGGCTTaGCACCATAAGCTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTSEPAYIQFITMIVSSLRAKA*HHKLHG Trigger: ACCATGAAGCTTATGGTGGCAAGCCTTGGCTCTGAG...AGAGGAAACAATCATAGTGATGAACTGGATGTAAGCTGGCTCAGACGTCCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR GCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCTTGAAGTTGCCGTaGAGCTTCCTTCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKLLKLP*SFLLFI Trigger: TATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAG...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAATATTGTAACTCCCTGTaGCCCTGTGAATGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQYCNSL*PCECWT Trigger: TGTCCAGCATTCACAGGGGCACAGGGAGTTACAATA...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCACCATCTGCTCCTCTaGTCTCTCTTGATGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSVHFLHLRPQFIFICLHHLLL*SLLMAS Trigger: AGAGGCCATCAAGAGAGACCAGAGGAGCAGATGGTG...GAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCGACAGGGCTCGATACTaGCTTCCAAACATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVHFLHLRPQFIFICLDRARY*LPNISR Trigger: CCTGGAGATGTTTGGAAGCCAGTATCGAGCCCTGTC...GAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAAGGTATGATCTTTTCTaGGGAGGACAGGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRRYDLF*GGQGSI Trigger: TATCGAGCCCTGTCCTCCCCAGAAAAGATCATACCT...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACGAAGGATTCTGGAATaGGAATCACACTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRRRILE*ESHFPP Trigger: AGGTGGAAAGTGTGATTCTCATTCCAGAATCCTTCG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTGCTCTTTCAGAGGTATaGTCTTTTCTGGGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVALSEV*SFLGRT Trigger: TGTCCTCCCCAGAAAAGATCATACCTCTGAAAGAGC...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGCTCTTTCAGAGGTATaGTCTTTTCTGGGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAALSEV*SFLGRT Trigger: TGTCCTCCCCAGAAAAGATCATACCTCTGAAAGAGC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGACTCTTGAAGTTGCCGTaGAGCTTCCTTCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRLLKLP*SFLLFI Trigger: TATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAG...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGTATTGTAACTCCCTGTaGCCCTGTGAATGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELYCNSL*PCECWT Trigger: TGTCCAGCATTCACAGGGGCACAGGGAGTTACAATA...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGCCTATGACAGTAAACTaGGCTGAGACCAGCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELPMTVN*AETSTN Trigger: GTTTGTGCTGGTCTCAGCCCAGTTTACTGTCATAGG...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTCCTATGACAGTAAACTaGGCTGAGACCAGCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAPMTVN*AETSTN Trigger: GTTTGTGCTGGTCTCAGCCCAGTTTACTGTCATAGG...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGGGCACGAAGGATTCTaGAATGAGAATCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQGHEGF*NENHTF Trigger: GAAAGTGTGATTCTCATTCCAGAATCCTTCGTGCCC...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| 3UTR CAA 72 bp | CTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTaGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPDIHCDQSSM*KLQVFCPSHTF Trigger: GAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGCGAAGGATTCTGGAATaGGAATCACACTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELRRILE*ESHFPP Trigger: AGGTGGAAAGTGTGATTCTCATTCCAGAATCCTTCG...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAAGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STLLLLPDIHCDQSSMLKGFFFS*QNRFLP Trigger: AGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCC...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTCTCTTGAAGTTGCCGTaGAGCTTCCTTCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVLLKLP*SFLLFI Trigger: TATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAG...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGCTCTTGAAGTTGCCGTaGAGCTTCCTTCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELLLKLP*SFLLFI Trigger: TATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAG...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTGGGCACGAAGGATTCTaGAATGAGAATCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVGHEGF*NENHTF Trigger: GAAAGTGTGATTCTCATTCCAGAATCCTTCGTGCCC...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGGGGCACGAAGGATTCTaGAATGAGAATCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELGHEGF*NENHTF Trigger: GAAAGTGTGATTCTCATTCCAGAATCCTTCGTGCCC...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGGGCACGAAGGATTCTaGAATGAGAATCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAGHEGF*NENHTF Trigger: GAAAGTGTGATTCTCATTCCAGAATCCTTCGTGCCC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTAGGTATGATCTTTTCTaGGGAGGACAGGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SVHFLHLRPQFIFICLLPRYDLF*GGQGSI Trigger: TATCGAGCCCTGTCCTCCCCAGAAAAGATCATACCT...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
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| CDS-3UTR TCA 90 bp | TCAGAAGTGTTTATTGTAGGGACGTCTGAGCCAGCTTACATCCAGTTCATCACTCGAAGGATTCTGGAATaGGAATCACACTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVFIVGTSEPAYIQFITRRILE*ESHFPP Trigger: AGGTGGAAAGTGTGATTCTCATTCCAGAATCCTTCG...AGTGATGAACTGGATGTAAGCTGGCTCAGACGTCCCTACAATAAACACTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQGFFFS*QNRFLP Trigger: AGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCC...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | TTACAAGGCTCTGAGAAATTGGTCTTGTCTTATATAGGAATAAGCCACCCTCAGACTTCTCTGGTCATCTaGCAGGAAGAGCTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQGSEKLVLSYIGISHPQTSLVI*QEELRM Trigger: CATCCTGAGCTCTTCCTGTCAGATGACCAGAGAAGT...CTGAGGGTGGCTTATTCCTATATAAGACAAGACCAATTTCTCAGAGCCTTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
||
| CDS-3UTR TCA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGATTCCTTACAAGGCTCTaGGAAATTGGTCTTGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDPPCCSCLISTVTRFLTRL*EIGLVL Trigger: TAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAA...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFLLRRELYYSNSPLRLAGFFFS*QNRFLP Trigger: AGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELGFFFS*QNRFLP Trigger: AGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCC...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACTCCAAGTTTTCTGCCCTTCTCACACTTTCTTCTCAGGAGAGAGCTGTTCCTTACAAGGCTCTaGGAAATTGGTCTTGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VETPSFLPFSHFLLRRELFLTRL*EIGLVL Trigger: TAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAA...CAGCTCTCTCCTGAGAAGAAAGTGTGAGAAGGGCAGAAAACTTGGAGTTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| 3UTR CAA 72 bp | GCTATGGCTTCCTTACAAGGCTCTGAGAAATTGGTCTaGTCTTATATAGGAATAAGCCACCCTCAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: AMASLQGSEKLV*SYIGISHPQVL Trigger: CAATACCTGAGGGTGGCTTATTCCTATATAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAAGCCATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
||
| CDS-3UTR TCA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTTTCCTTACAAGGCTCTaGGAAATTGGTCTTGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVHFLHLRPQFIFICLLPFLTRL*EIGLVL Trigger: TAAGACAAGACCAATTTCTCAGAGCCTTGTAAGGAA...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110433.10 |
||
| 3UTR CAA 72 bp | TATACACTCCAGACACACTATGTGATATTTAAATCTTaGGCTTTGGATATCAATGGACCATTAGCTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: YTLQTHYVIFKS*ALDINGPLAPT Trigger: GGTAGGAGCTAATGGTCCATTGATATCCAAAGCCAAAGATTTAAATATCACATAGTGTGTCTGGAGTGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR CAA 90 bp | GTAACTCCCTGTGCCCCTGTGAATGCTGGACAGATGAACAGGGGACTGTCATCATTCCTGCGGTGTTTCTaGACAAGGCAGATGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTPCAPVNAGQMNRGLSSFLRCF*TRQMLP Trigger: TGGAAGCATCTGCCTTGTCAAGAAACACCGCAGGAA...TGATGACAGTCCCCTGTTCATCTGTCCAGCATTCACAGGGGCACAGGGAGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041541.11 |
||
| CDS-3UTR CAA 90 bp | TATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCTCAAATCTCTCAGGGTaGTCAGGCACACTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YPQLSHRAYPRALQSISSSNLSG*SGTLCL Trigger: GAGGCAGAGTGTGCCTGACAACCCTGAGAGATTTGA...GGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAAGCGCAACTCTTCCCTaGCTGATGTCTGTGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQSATLP*LMSVRM Trigger: CATGCGCACAGACATCAGCAAGGGAAGAGTTGCGCT...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CAA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAAGCGCAACTCTTCCCTaGCTGATGTCTGTGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDPPCCSCLISTVTRSATLP*LMSVRM Trigger: CATGCGCACAGACATCAGCAAGGGAAGAGTTGCGCT...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTAGCGCAACTCTTCCCTaGCTGATGTCTGTGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVSATLP*LMSVRM Trigger: CATGCGCACAGACATCAGCAAGGGAAGAGTTGCGCT...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CAA 90 bp | ATCCACAGCTGTCACATAGGGCTTACCCCAGAGCTCTTCAGTCCATTTCCTCCACTGAGCAGAGTGTTATaGACAGAGCAGGTCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IHSCHIGLTPELFSPFPPLSRVL*TEQVMF Trigger: GAACATGACCTGCTCTGTCAATAACACTCTGCTCAG...TGGAGGAAATGGACTGAAGAGCTCTGGGGTAAGCCCTATGTGACAGCTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAATCAAATCTCTCAGGGTaGTCAGGCACACTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPDIHCDQSSMLKLQSNLSG*SGTLCL Trigger: GAGGCAGAGTGTGCCTGACAACCCTGAGAGATTTGA...TTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTGTCAGGCAGTTCCTCTaGAAGTTGCCGTGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLLRRELYYSNSPLRLAVRQFL*KLPCSF Trigger: GAAGCTGCACGGCAACTTCAAGAGGAACTGCCTGAC...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223877.2 |
||
| CDS-3UTR CAA 90 bp | TCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTGAGCAGAGTGTTATaGACAGAGCAGGTCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STLLLLPDIHCDQSSMLKLSRVL*TEQVMF Trigger: GAACATGACCTGCTCTGTCAATAACACTCTGCTCAG...TTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CAA 90 bp | TTCTTACATCCTGATCCACCCTGTTGCTCTTGCCTGATATCCACTGTGACCAGATTCCTGCGGTGTTTCTaGACAAGGCAGATGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDPPCCSCLISTVTRFLRCF*TRQMLP Trigger: TGGAAGCATCTGCCTTGTCAAGAAACACCGCAGGAA...TCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGGATGTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS GCA 90 bp | ATCCTCAAGTGTCTTCATTTTAATAAGTGGCTCAGAGCCAAGGCTTaGCACCATAAGCTTCATGGTTGCCTGGTCATAGGACCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKCLHFNKWLRAKA*HHKLHGCLVIGPAF Trigger: GAAGGCAGGTCCTATGACCAGGCAACCATGAAGCTTATGGTGGCAAGCCTTGGCTCTGAGCCACTTATTAAAATGAAGACACTTGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CAA 90 bp | CACTTTCTTCTCAGGAGAGAGCTGTATTACAGCAATAGTCCCCTAAGACTGGCTTTCCTGCGGTGTTTCTaGACAAGGCAGATGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HFLLRRELYYSNSPLRLAFLRCF*TRQMLP Trigger: TGGAAGCATCTGCCTTGTCAAGAAACACCGCAGGAA...AGCCAGTCTTAGGGGACTATTGCTGTAATACAGCTCTCTCCTGAGAAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCTTGCCTGATATCCACTGTGACCAGAGCAGCATGTTGAAACTCCAAGTTTTCCTGCGGTGTTTCTaGACAAGGCAGATGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPDIHCDQSSMLKLQVFLRCF*TRQMLP Trigger: TGGAAGCATCTGCCTTGTCAAGAAACACCGCAGGAA...AACTTGGAGTTTCAACATGCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCATTTCCTCCATCTTCGGCCTCAATTCATCTTTATCTGTCTCCTTCCTTCAAATCTCTCAGGGTaGTCAGGCACACTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVHFLHLRPQFIFICLLPSNLSG*SGTLCL Trigger: GAGGCAGAGTGTGCCTGACAACCCTGAGAGATTTGA...AGGAAGGAGACAGATAAAGATGAATTGAGGCCGAAGATGGAGGAAATGGACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041541.11 ENSMUST00000110433.10 |
||
| CDS TCA 90 bp | TTGCCGTGCAGCTTCCTTCTCTTCATATTCGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCTGCGGTGTTTCTTGACAAGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPCSFLLFIFGFFFS*QNRFLPAVFLDKAD Trigger: ATCTGCCTTGTCAAGAAACACCGCAGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCCGAATATGAAGAGAAGGAAGCTGCACGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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| CDS CCA 72 bp | CACCATCCACAGAGGAAGGCTGGGCACGAAGGATTCTaGAATGAGAATCACACTTTCCACCTCCTGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HHPQRKAGHEGF*NENHTFHLLAE Trigger: CTCAGCCAGGAGGTGGAAAGTGTGATTCTCATTCCAGAATCCTTCGTGCCCAGCCTTCCTCTGTGGATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS TCA 72 bp | GATGGGCTCAGCTGGTCCTATGACAGTAAACTGGGCTaGGACCAGCACAAACAGGCTGAGGACCAAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DGLSWSYDSKLG*DQHKQAEDQEE Trigger: TTCTTCTTGGTCCTCAGCCTGTTTGTGCTGGTCTCAGCCCAGTTTACTGTCATAGGACCAGCTGAGCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS TCA 72 bp | AGACAGCTATACGGTGAAGACGCTCTTTCAGAGGTATaGTCTTTTCTGGGGAGGACAGGGCTCGATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQLYGEDALSEV*SFLGRTGLDTG Trigger: GCCAGTATCGAGCCCTGTCCTCCCCAGAAAAGATCATACCTCTGAAAGAGCGTCTTCACCGTATAGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS CAA 72 bp | TGTATCTGGGTCCAGGACCACGTCAGGCAGTTCCTCTaGAAGTTGCCGTGCAGCTTCCTTCTCTTCATATTC | + |
|
Preference number: 6 (lower is better) Translates to: CIWVQDHVRQFL*KLPCSFLLFIF Trigger: GAATATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAGGAACTGCCTGACGTGGTCCTGGACCCAGATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223877.2 |
||
| CDS TCA 72 bp | TCTCCACCCTCACAGTCCAGGAAGACAGCTATACGGTaGAGACGCTCTTTCAGAGGTATGATCTTTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPPSQSRKTAIR*RRSFRGMIFSG Trigger: CCCAGAAAAGATCATACCTCTGAAAGAGCGTCTTCACCGTATAGCTGTCTTCCTGGACTGTGAGGGTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS GCA 72 bp | CAGGACCACGTCAGGCAGTTCCTCTTGAAGTTGCCGTaGAGCTTCCTTCTCTTCATATTCGGCTTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QDHVRQFLLKLP*SFLLFIFGFFF Trigger: GAAAAAGAAGCCGAATATGAAGAGAAGGAAGCTGCACGGCAACTTCAAGAGGAACTGCCTGACGTGGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223877.2 |
||
| CDS CCA 72 bp | AAGGATTCTGGAATGAGAATCACACTTTCCACCTCCTaGCTGAGCAGAGTGTTATTGACAGAGCAGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KDSGMRITLSTS*LSRVLLTEQVM Trigger: CATGACCTGCTCTGTCAATAACACTCTGCTCAGCCAGGAGGTGGAAAGTGTGATTCTCATTCCAGAATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
||
| CDS TCA 72 bp | AGCTTCCTTCTCTTCATATTCGGCTTCTTTTTCAGCTaGCAGAATAGATTTCTTCCTGCGGTGTTTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFLLFIFGFFFS*QNRFLPAVFLD Trigger: GTCAAGAAACACCGCAGGAAGAAATCTATTCTGTCAGCTGAAAAAGAAGCCGAATATGAAGAGAAGGAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041541.11 ENSMUST00000110432.2 ENSMUST00000110433.10 ENSMUST00000223877.2 |
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