Pregenerated sensors for BTN1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000706Ensembl transcript IDs: ENSMUST00000041674.14, ENSMUST00000110434.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTaGCAGCTCCAGATCAAACAGCGATGCTACCTGAGCGTTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: GACEGVKHCSGGRGS*QLQIKQRCYLSVAE Trigger: TTCAGCAACGCTCAGGTAGCATCGCTGTTTGATCTGGAGCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 90 bp | TGCAGTGGGGGCCGAGGGAGCTGGCAGCTCCAGATCAAACAGCGATaGTACCTGAGCGTTGCTGAATCAAACCAGGTGGACTGGATAGGG | + |
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Preference number: 1 (lower is better) Translates to: CSGGRGSWQLQIKQR*YLSVAESNQVDWIG Trigger: CCCTATCCAGTCCACCTGGTTTGATTCAGCAACGCTCAGGTAGCATCGCTGTTTGATCTGGAGCTGCCAGCTCCCTCGGCCCCCACTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 90 bp | GGTGGACTGGATAGGGGTGGTGGATGTGGCTATGTTTCCAGCACTTaGAAGGTAGAGGCAGGAGGATCAGGAATTCAAAGCCAGCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GGLDRGGGCGYVSST*KVEAGGSGIQSQPK Trigger: CTTAGGCTGGCTTTGAATTCCTGATCCTCCTGCCTCTACCTTCCAAGTGCTGGAAACATAGCCACATCCACCACCCCTATCCAGTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 90 bp | GCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTaGGTAGGCTACATTGAGCAAATGGCTCAGTGTGGAAAAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: AEHHGVTLGTRKQDT*VGYIEQMAQCGKGW Trigger: CCATCCTTTTCCACACTGAGCCATTTGCTCAATGTAGCCTACCCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 90 bp | TTCTTCCTGCCTTGTCTGGCAGCAACATACCTAACCTTCCCAATGTaGATTAATCTCCATCCACCAGGAAGAAGCAGGGCTGCAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: FFLPCLAATYLTFPM*INLHPPGRSRAARS Trigger: GCTTCTTGCAGCCCTGCTTCTTCCTGGTGGATGGAGATTAATTCACATTGGGAAGGTTAGGTATGTTGCTGCCAGACAAGGCAGGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 90 bp | TGTAACTTTGGGGACCAGAAAGCAGGATACCTGGGTAGGCTACATTaGGCAAATGGCTCAGTGTGGAAAAGGATGGCAGTGTTAGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: CNFGDQKAGYLGRLH*ANGSVWKRMAVLGK Trigger: CTTGCCTAACACTGCCATCCTTTTCCACACTGAGCCATTTGCTCAATGTAGCCTACCCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 90 bp | CTATTCATCTCCGCTCCTTTCTGTCTCTTGCTAGCTTGCTCACATTaGTCTCAAACAAGCAGGGCCAGTCTCCTCTATCTTATAGAACAT | + |
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Preference number: 1 (lower is better) Translates to: LFISAPFCLLLACSH*SQTSRASLLYLIEH Trigger: ATGTTCTATAAGATAGAGGAGACTGGCCCTGCTTGTTTGAGAGCAATGTGAGCAAGCTAGCAAGAGACAGAAAGGAGCGGAGATGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCCTAACCTTCCCAATGTaGATTAATCTCCATCCACCA | + |
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Preference number: 2 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSLTFPM*INLHPP Trigger: TGGTGGATGGAGATTAATTCACATTGGGAAGGTTAG...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTGGGCAAATGGCTCAGTGTaGAAAAGGATGGCAGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SCAEHHGVTLGTRKQDTWANGSV*KRMAVL Trigger: TAACACTGCCATCCTTTTCCACACTGAGCCATTTGC...CCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR GCA 90 bp | GTACAGAAACAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATAAGGAAGAAGCAGGGCTaGAAGAAGCCAACAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VQKQTRMAFLPALSGSNIRKKQG*KKPTAE Trigger: TTCAGCTGTTGGCTTCTTGCAGCCCTGCTTCTTCCT...TATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTGTTTCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR TCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACTCCCAGCTGAGCTATTaGCTGCTGATTGATTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHSQLSY*LLIDCR Trigger: CCTACAATCAATCAGCAGTCAATAGCTCAGCTGGGA...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR GCA 90 bp | ACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACACACAAAGAATGACCGAGCAATaGTGTCTTCTGGGCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: THRPLTKRSPIQTGGHTQRMTEQ*CLLGSC Trigger: GCAAGAGCCCAGAAGACAGCATTGCTCGGTCATTCT...TTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCATCCTATGGTTTGGTTTTGTTCTCCCTTACCTAAAACCTGTCATTCCACAGATGGCCTTTCTTCCTaGCTTGTCTGGCAGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: QHPMVWFCSPLPKTCHSTDGLSS*LVWQQH Trigger: ATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATC...TGTGGAATGACAGGTTTTAGGTAAGGGAGAACAAAACCAAACCATAGGATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGGCCCTTTCTCTGCCATAATTCCATaGCAACCTAATTGCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VFWALAIMISQVLKTGPFSAIIP*QPNCLL Trigger: CAAGAGGCAATTAGGTTGGCATGGAATTATGGCAGA...GAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR GCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACTGTCTTCTGGGCTCTTaGAATCATGATCTCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHCLLGS*NHDLTG Trigger: ACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACA...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CAA 90 bp | AAAAATACAATAGAAGTGGAAGAGCTTGGATACACACACAGGCCATaGACAAAAAGAAGTCCCATACAAACAGGAGGACACACACAAATT | + |
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Preference number: 2 (lower is better) Translates to: KNTIEVEELGYTHRP*TKRSPIQTGGHTQI Trigger: AATTTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCCAAGCTCTTCCACTTCTATTGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCATTTTTCACTTATCTAGTTCCTTGTTGCAAATTCTTGCTGGATTTAGCAGTGGGAGATTTGCTTaGTTTGGATCACTAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSIFHLSSSLLQILAGFSSGRFA*FGSLTG Trigger: CCCTGTTAGTGATCCAAATCAAGCAAATCTCCCACT...GCTAAATCCAGCAAGAATTTGCAACAAGGAACTAGATAAGTGAAAAATGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTTTCACAGTAGGAAAAACTGAGTGGGAGATTTGCTTGATTTGGATCACTAAACCATTTTGGAGGTaGATAAAGAACTTTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SGFTVGKTEWEICLIWITKPFWR*IKNFSN Trigger: GTTGCTAAAGTTCTTTATCCACCTCCAAAATGGTTT...AGTGATCCAAATCAAGCAAATCTCCCACTCAGTTTTTCCTACTGTGAAACCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCATTTTTCACTTATCTAGTTCCTTGTTGCAAATTCTTGCTGGATTTAGCGAGATTTGCTTGATTTaGATCACTAACAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QSIFHLSSSLLQILAGFSEICLI*ITNREG Trigger: TCCCTCCCTGTTAGTGATCCAAATCAAGCAAATCTC...GCTAAATCCAGCAAGAATTTGCAACAAGGAACTAGATAAGTGAAAAATGCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
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| 3UTR GCA 72 bp | GGCCGAGGGAGCTGGCAGCTCCAGATCAAACAGCGATaGTACCTGAGCGTTGCTGAATCAAACCAGGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: GRGSWQLQIKQR*YLSVAESNQVD Trigger: GTCCACCTGGTTTGATTCAGCAACGCTCAGGTAGCATCGCTGTTTGATCTGGAGCTGCCAGCTCCCTCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 72 bp | GGGGACCAGAAAGCAGGATACCTGGGTAGGCTACATTaGGCAAATGGCTCAGTGTGGAAAAGGATGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GDQKAGYLGRLH*ANGSVWKRMAV Trigger: CACTGCCATCCTTTTCCACACTGAGCCATTTGCTCAATGTAGCCTACCCAGGTATCCTGCTTTCTGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 72 bp | AGTCTCATGAGGCCCTACCCCTCCCAGCTGAGCTATTaGCTGCTGATTGATTGTAGGAGAGGGGAAATCACT | + |
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Preference number: 3 (lower is better) Translates to: SLMRPYPSQLSY*LLIDCRRGEIT Trigger: AGTGATTTCCCCTCTCCTACAATCAATCAGCAGTCAATAGCTCAGCTGGGAGGGGTAGGGCCTCATGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 72 bp | GGGAGAATGACCGAGCAATGCTGTCTTCTGGGCTCTTaGAATCATGATCTCACAGGTGCTAAAAACTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRMTEQCCLLGS*NHDLTGAKNWP Trigger: GGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCTCGGTCATTCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTGCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTGGCTCAGTGTGCCAGGTTaGAAGCAAGAAGGAAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: SCAEHHGVTLGTRKQDTWLSVPG*KQEGRY Trigger: ATACCTTCCTTCTTGCTTCAAACCTGGCACACTGAG...CCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 72 bp | TCCGCTCCTTTCTGTCTCTTGCTAGCTTGCTCACATTaGTCTCAAACAAGCAGGGCCAGTCTCCTCTATCTT | + |
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Preference number: 3 (lower is better) Translates to: SAPFCLLLACSH*SQTSRASLLYL Trigger: AAGATAGAGGAGACTGGCCCTGCTTGTTTGAGAGCAATGTGAGCAAGCTAGCAAGAGACAGAAAGGAGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 72 bp | CATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTaGGTAGGCTACATTGAGCAAATGGCTCAGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: HGVTLGTRKQDT*VGYIEQMAQCG Trigger: TCCACACTGAGCCATTTGCTCAATGTAGCCTACCCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 72 bp | CCTTGTCTGGCAGCAACATACCTAACCTTCCCAATGTaGATTAATCTCCATCCACCAGGAAGAAGCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PCLAATYLTFPM*INLHPPGRSRA Trigger: AGCCCTGCTTCTTCCTGGTGGATGGAGATTAATTCACATTGGGAAGGTTAGGTATGTTGCTGCCAGACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR CAA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGTCACACCTGCTCTCTaGAGCTCAGAGGAAAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SNAVFWALAIMISQVLKTVTPAL*SSEESS Trigger: AGAGCTTTCCTCTGAGCTCAAGAGAGCAGGTGTGAC...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR-3UTR CAA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACGCTCCTTTCTGTCTCTaGCTAGCTTGCTCACATTGC | + |
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Preference number: 3 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHAPFCL*LACSHC Trigger: GCAATGTGAGCAAGCTAGCAAGAGACAGAAAGGAGC...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 72 bp | AAGAAGTCCCATACAAACAGGAGGACACACACAAATTaGGACAAACTGTCCAGCTGTGCTGAGCATCATGGT | + |
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Preference number: 3 (lower is better) Translates to: KKSHTNRRTHTN*DKLSSCAEHHG Trigger: ACCATGATGCTCAGCACAGCTGGACAGTTTGTCCCAATTTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR TCA 72 bp | AGGGGAAATCACTGTATTCAGTCACACCTGCTCTCTTaGGCTCAGAGGAAAGCTCTAAATCCATGTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RGNHCIQSHLLS*AQRKALNPCSH Trigger: ATGGGAACATGGATTTAGAGCTTTCCTCTGAGCTCAAGAGAGCAGGTGTGACTGAATACAGTGATTTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 72 bp | GGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTaGCCCTTTCAACATTTAGCCTTGATAGGGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: GSCNHDLTGAKN*PFQHLALIGEV Trigger: GACTTCCCCTATCAAGGCTAAATGTTGAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 72 bp | CCAGATGTTTCTGCCATAATTCCATGCCAACCTAATTaGCTCTTGATCCCTCGAGTGATTGTACCAAATCCT | + |
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Preference number: 3 (lower is better) Translates to: PDVSAIIPCQPN*LLIPRVIVPNP Trigger: AGGATTTGGTACAATCACTCGAGGGATCAAGAGGCAATTAGGTTGGCATGGAATTATGGCAGAAACATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR GCA 72 bp | CATACCCCTATTCCAGATGTTTCTGCCATAATTCCATaGCAACCTAATTGCCTCTTGATCCCTCGAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: HTPIPDVSAIIP*QPNCLLIPRVI Trigger: AATCACTCGAGGGATCAAGAGGCAATTAGGTTGGCATGGAATTATGGCAGAAACATCTGGAATAGGGGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CCA 72 bp | GAGTTTAGTCCAAGATCTTTCTTTCTCAGCATCCTATaGTTTGGTTTTGTTCTCCCTTACCTAAAACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: EFSPRSFFLSIL*FGFVLPYLKPV Trigger: GACAGGTTTTAGGTAAGGGAGAACAAAACCAAACCATAGGATGCTGAGAAAGAAAGATCTTGGACTAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR TCA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCTTATGGAGCTGTCTCTaGTCATCATTGAAACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSLWSCL*SSLKLP Trigger: TGGCAGTTTCAATGATGATCAGAGACAGCTCCATAA...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR GCA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCGGAGGATATTCTGGATaGAGCAGGACATGTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSGGYSG*SRTCSL Trigger: TAAAGAACATGTCCTGCTGCATCCAGAATATCCTCC...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CCA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCGGGATCAGTTTAGAATaGAGAGTGTCTTTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSGISLE*RVSLSP Trigger: TGGAGACAAAGACACTCTCCATTCTAAACTGATCCC...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR GCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACCGGTACTCCGTCATCTaGTGGCCCTCCTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHRYSVI*WPSCSW Trigger: CCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCG...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR TCA 90 bp | CTCACAGGTGCTAAAAACTGGCCCTTTCAACATTTAGCCTTGATAGGGGAAGTCGCCAACACTGGCTCCTaGGGTGCGGTCACATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LTGAKNWPFQHLALIGEVANTGS*GAVTSK Trigger: CTTCGATGTGACCGCACCTCAGGAGCCAGTGTTGGC...GACTTCCCCTATCAAGGCTAAATGTTGAAAGGGCCAGTTTTTAGCACCTGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR TCA 90 bp | AGCTGTGCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTGGCCAGTAATGTCTCCCTaGAGTAAAGGTCTCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: SCAEHHGVTLGTRKQDTWPVMSP*SKGLTA Trigger: GGCCGTGAGACCTTTACTTCAGGGAGACATTACTGG...CCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR GCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACCACTGGCTCCTGAGGTaGGGTCACATCGAAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHHWLLR*GHIEGS Trigger: GCTCCCTTCGATGTGACCGCACCTCAGGAGCCAGTG...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR GCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTATCTGCTGGCCCTCCTaGTCCTGGCCATCCCGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTICWPS*SWPSRY Trigger: ATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGAT...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTTACTCCGTCATCTGCTaGCCCTCCTGCTCCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTYSVIC*PSCSWP Trigger: TGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTA...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CCA 90 bp | GTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGGCCCTTTCTCATACAGGAAGAGGTaGGGGTGGGCTGTGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VFWALAIMISQVLKTGPFSYRKR*GWAVSG Trigger: TCCAGACACAGCCCACCCCCACCTCTTCCTGTATGA...GAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CAA 72 bp | CTCCGCTCCTTTCTGTCTCTTGCTAGCTTGCTCACATaGCTCTCAAACAAGCAGGGCCAGTCTCCTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: LRSFLSLASLLT*LSNKQGQSPLS Trigger: AGATAGAGGAGACTGGCCCTGCTTGTTTGAGAGCAATGTGAGCAAGCTAGCAAGAGACAGAAAGGAGCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| 3UTR CAA 72 bp | AAACTGTCCAGCTGTGCTGAGCATCATGGTGTAACTTaGGGGACCAGAAAGCAGGATACCTGGGTAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: KLSSCAEHHGVT*GTRKQDTWVGY Trigger: GTAGCCTACCCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCTGGACAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR TCA 90 bp | AGCTGTGCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTGGACTGATTTGAGGATCTaGACCCACAGCAGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCAEHHGVTLGTRKQDTWTDLRI*THSSHF Trigger: AAAGTGGCTGCTGTGGGTTCAGATCCTCAAATCAGT...CCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGGCCCTTTCACCATCCAGAGGAGGTaGACTCCAGCTCCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFWALAIMISQVLKTGPFTIQRR*TPAPFL Trigger: GAGAAATGGAGCTGGAGTGCACCTCCTCTGGATGGT...GAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACACACAACTGCACCTGAGGCTCTaGGTACCATCCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THRPLTKRSPIQTGGHTQLHLRL*VPSRGG Trigger: ACCTCCTCTGGATGGTACCCAGAGCCTCAGGTGCAG...TTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| 3UTR CAA 72 bp | CCTATTCATCTCCGCTCCTTTCTGTCTCTTGCTAGCTaGCTCACATTGCTCTCAAACAAGCAGGGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLRSFLSLAS*LTLLSNKQGQS Trigger: AGACTGGCCCTGCTTGTTTGAGAGCAATGTGAGCAAGCTAGCAAGAGACAGAAAGGAGCGGAGATGAATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTAGGCCCATTGGCAGTTaGACAGATGGTCAGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTRPIGS*TDGQGL Trigger: AAGCCCCTGACCATCTGTTCAACTGCCAATGGGCCT...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTCACAGTAGGAAAAACTGAGTGGGAGATTTGCTTGATTTGGATCACTTACTCCGTCATCTGCTaGCCCTCCTGCTCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFTVGKTEWEICLIWITYSVIC*PSCSWP Trigger: TGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTA...AGTGATCCAAATCAAGCAAATCTCCCACTCAGTTTTTCCTACTGTGAAACCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGGCCCTTTCCCAAGGAGGATATTCTaGATGCAGCAGGACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFWALAIMISQVLKTGPFPRRIF*MQQDMF Trigger: GAACATGTCCTGCTGCATCCAGAATATCCTCCTTGG...GAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACTCTACTTCCTTCCCCTaGCCAAGGAGGATATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHSTSFP*PRRIFW Trigger: CCAGAATATCCTCCTTGGCCAGGGGAAGGAAGTAGA...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | CAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATACCTAACCTTGGAGTCAAATCTCTCTaGTCTATCAGGCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTRMAFLPALSGSNIPNLGVKSL*SIRQDL Trigger: CAGATCCTGCCTGATAGACCAGAGAGATTTGACTCC...AAGGTTAGGTATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACCCCTACACACACCAATaGCCCAGTCAGTTCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHPYTHQ*PSQFYL Trigger: GAGATAGAACTGACTGGGCCATTGGTGTGTGTAGGG...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | CAGCATCCTATGGTTTGGTTTTGTTCTCCCTTACCTAAAACCTGTCATTCCACAAGTCGTCGTTGTCTTTaGAAAGGCACCGGTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHPMVWFCSPLPKTCHSTSRRCL*KGTGTP Trigger: GGGAGTACCGGTGCCTTTTCAAAGACAACGACGACT...TGTGGAATGACAGGTTTTAGGTAAGGGAGAACAAAACCAAACCATAGGATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR GCA 90 bp | GATCTCAGACAGGGAGAAGAAGACAACATGAGTAATATGAGTAAAACCATTTTGCACTGGCTCCTGAGGTaGGGTCACATCGAAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRQGEEDNMSNMSKTILHWLLR*GHIEGS Trigger: GCTCCCTTCGATGTGACCGCACCTCAGGAGCCAGTG...CAAAATGGTTTTACTCATATTACTCATGTTGTCTTCTTCTCCCTGTCTGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR GCA 90 bp | GATCTCAGACAGGGAGAAGAAGACAACATGAGTAATATGAGTAAAACCATTTTGATCTGCTGGCCCTCCTaGTCCTGGCCATCCCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRQGEEDNMSNMSKTILICWPS*SWPSRY Trigger: ATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGAT...CAAAATGGTTTTACTCATATTACTCATGTTGTCTTCTTCTCCCTGTCTGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR GCA 90 bp | ACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACACACAAGTAGCATCTCTCTGTTaGCTGTTCTCCACTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: THRPLTKRSPIQTGGHTQVASLC*LFSTAP Trigger: AGGTGCAGTGGAGAACAGGCAACAGAGAGATGCTAC...TTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| 3UTR CAA 72 bp | GAGGGGAAATCACTGTATTCAGTCACACCTGCTCTCTaGAGCTCAGAGGAAAGCTCTAAATCCATGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGKSLYSVTPAL*SSEESSKSMFP Trigger: TGGGAACATGGATTTAGAGCTTTCCTCTGAGCTCAAGAGAGCAGGTGTGACTGAATACAGTGATTTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | CAAAGCATTTTTCACTTATCTAGTTCCTTGTTGCAAATTCTTGCTGGATTTAGCGCCAACACTGGCTCCTaGGGTGCGGTCACATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSIFHLSSSLLQILAGFSANTGS*GAVTSK Trigger: CTTCGATGTGACCGCACCTCAGGAGCCAGTGTTGGC...GCTAAATCCAGCAAGAATTTGCAACAAGGAACTAGATAAGTGAAAAATGCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTTCACAGTAGGAAAAACTGAGTGGGAGATTTGCTTGATTTGGATCACTAGTCGTCGTTGTCTTTaGAAAGGCACCGGTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFTVGKTEWEICLIWITSRRCL*KGTGTP Trigger: GGGAGTACCGGTGCCTTTTCAAAGACAACGACGACT...AGTGATCCAAATCAAGCAAATCTCCCACTCAGTTTTTCCTACTGTGAAACCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGTGCTAAAAACTGGCCCTTTCAACATTTAGCCTTGATAGGGGAAGTCCTTGAACCGTCATACTaGTTTGAGGATCTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGAKNWPFQHLALIGEVLEPSY*FEDLNP Trigger: TGGGTTCAGATCCTCAAATCAGTATGACGGTTCAAG...GACTTCCCCTATCAAGGCTAAATGTTGAAAGGGCCAGTTTTTAGCACCTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | GGATACACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACATATGGACCCAATGGTaGGAAATCCTAAGGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GYTHRPLTKRSPIQTGGHIWTQW*EILRPV Trigger: TACTGGCCTTAGGATTTCTCACCATTGGGTCCATAT...GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTCTATCAGGCAGGATCTaGCGTGAATCTTCCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTLSGRI*RESSNR Trigger: TCGATTGGAAGATTCACGTCAGATCCTGCCTGATAG...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTCTTTCTCAGGCCCATTaGCAGTTGAACAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTLSQAH*QLNRWS Trigger: TGACCATCTGTTCAACTGCCAATGGGCCTGAGAAAG...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGTCTCTGATCATCATTaGAACTGCCACAGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTVSDHH*NCHSEQ Trigger: CTGTTCACTGTGGCAGTTTCAATGATGATCAGAGAC...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR TCA 90 bp | GTACAGAAACAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATACAGTCTTTTTGCATCTaGGTTCTTCCAGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQKQTRMAFLPALSGSNIQSFCI*VLPEVS Trigger: AGAGACTTCTGGAAGAACTCAGATGCAAAAAGACTG...TATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTGTTTCTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CCA 90 bp | CAGCATCCTATGGTTTGGTTTTGTTCTCCCTTACCTAAAACCTGTCATTCCACATGGCAGTTGAACAGATaGTCAGGGGCTTTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QHPMVWFCSPLPKTCHSTWQLNR*SGAFYH Trigger: GTGGTAAAAAGCCCCTGACCATCTGTTCAACTGCCA...TGTGGAATGACAGGTTTTAGGTAAGGGAGAACAAAACCAAACCATAGGATGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CCA 90 bp | ACACACAGGCCATTGACAAAAAGAAGTCCCATACAAACAGGAGGACACACACAAAAGGGAATGTCGTCCTaGACATTAGCAATGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: THRPLTKRSPIQTGGHTQKGMSS*TLAMTV Trigger: CACAGTCATTGCTAATGTCCAGGACGACATTCCCTT...TTGTGTGTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| 3UTR CAA 72 bp | ATAGAAGTGGAAGAGCTTGGATACACACACAGGCCATaGACAAAAAGAAGTCCCATACAAACAGGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: IEVEELGYTHRP*TKRSPIQTGGH Trigger: GTGTCCTCCTGTTTGTATGGGACTTCTTTTTGTCAATGGCCTGTGTGTGTATCCAAGCTCTTCCACTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR TCA 90 bp | CAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATACCTAACCTTTGTATAGTTTCCAAGTaGAAAATATGGACCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTRMAFLPALSGSNIPNLCIVSK*KIWTQW Trigger: CCATTGGGTCCATATTTTTCACTTGGAAACTATACA...AAGGTTAGGTATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CCA 90 bp | AGCAATGCTGTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTCATTATCAGGAGTCATaGGGTCAAACCCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNAVFWALAIMISQVLKTHYQES*GQTLSS Trigger: TGAAGAAAGGGTTTGACCCCATGACTCCTGATAATG...AGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGACAGCATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS GCA 90 bp | AGCCCGGCTGTCGCCAGCGTCGCCCTCCCGCGGTACTCCGTCATCTaGTGGCCCTCCTGCTCCTGGCCATCCCGGTATAGAAGTACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAVASVALPRYSVI*WPSCSWPSRYRSTA Trigger: AGCGGTACTTCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGGGAGGGCGACGCTGGCGACAGCCGGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS CCA 90 bp | CCGGCTGTCGCCAGCGTCGCCCTCCCGCGGTACTCCGTCATCTGCTaGCCCTCCTGCTCCTGGCCATCCCGGTATAGAAGTACCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAVASVALPRYSVIC*PSCSWPSRYRSTAV Trigger: GACAGCGGTACTTCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGGGAGGGCGACGCTGGCGACAGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
||
| CDS GCA 90 bp | GCCAGCGTCGCCCTCCCGCGGTACTCCGTCATCTGCTGGCCCTCCTaGTCCTGGCCATCCCGGTATAGAAGTACCGCTGTCGACCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASVALPRYSVICWPS*SWPSRYRSTAVDLV Trigger: GACGAGGTCGACAGCGGTACTTCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGGGAGGGCGACGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS CCA 90 bp | GTCGCCCTCCCGCGGTACTCCGTCATCTGCTGGCCCTCCTGCTCCTaGCCATCCCGGTATAGAAGTACCGCTGTCGACCTCGTCTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VALPRYSVICWPSCS*PSRYRSTAVDLVCR Trigger: TCGACAGACGAGGTCGACAGCGGTACTTCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGGGAGGGCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS-3UTR CAA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCTCCAGGGAGTCAGCCTaGGCACGAAGGGAGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSSRESA*ARRELV Trigger: TACCAGCTCCCTTCGTGCCAAGGCTGACTCCCTGGA...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS-3UTR CAA 90 bp | AAGGTGCCTGTGAGGGGGTTAAGCATTGCAGTGGGGGCCGAGGGAGCTGGCAGCGGTAGCATCTCTCTGTaGCCTGTTCTCCACTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KVPVRGLSIAVGAEGAGSGSISL*PVLHCT Trigger: GGTGCAGTGGAGAACAGGCAACAGAGAGATGCTACC...GCTGCCAGCTCCCTCGGCCCCCACTGCAATGCTTAACCCCCTCACAGGCACCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS CCA 90 bp | TCCTCGAAGTCGTCGTTGTCTTTGAAAAGGCACCGGTACTCCCCCTaGTCTGAGACCCTGACATCTCGGATCAGCAGAGTAGCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSKSSLSLKRHRYSP*SETLTSRISRVARP Trigger: CGGCCGCGCTACTCTGCTGATCCGAGATGTCAGGGTCTCAGACCAGGGGGAGTACCGGTGCCTTTTCAAAGACAACGACGACTTCGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
||
| CDS CCA 90 bp | CCAGAAGTACAGCCTTCCCCCAGCGGGGACAAGGGAATGTCGTCCTaGACATTAGCAATGACTGTGACTTTCTCAGGCCCATTGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PEVQPSPSGDKGMSS*TLAMTVTFSGPLAV Trigger: AACTGCCAATGGGCCTGAGAAAGTCACAGTCATTGCTAATGTCCAGGACGACATTCCCTTGTCCCCGCTGGGGGAAGGCTGTACTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGAAGCTTCGGGGCATGAGGGATTAGTCAAAGGAAGGCAAAGTCGTGAACAGGCCCATTGGCAGTaGAACAGATGGTCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAEASGHEGLVKGRQSREQAHWQ*NRWSGA Trigger: AGCCCCTGACCATCTGTTCAACTGCCAATGGGCCTG...TTCACGACTTTGCCTTCCTTTGACTAATCCCTCATGCCCCGAAGCTTCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS TCA 90 bp | CTCCATTTCTCCATTCTCTTGAACCGTCATACTGATTTGAGGATCTaGACCCACAGCAGCCACTTTGAGGTATACGGCGGCCTCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHFSILLNRHTDLRI*THSSHFEVYGGLLE Trigger: TTCGAGGAGGCCGCCGTATACCTCAAAGTGGCTGCTGTGGGTTCAGATCCTCAAATCAGTATGACGGTTCAAGAGAATGGAGAAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGCTGAGCATCATGGTGTAACTTTGGGGACCAGAAAGCAGGATACCTGGTCCTCATTATGCTTCTaGGACTCTGACGTGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCAEHHGVTLGTRKQDTWSSLCF*DSDVDG Trigger: ACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGA...CCAGGTATCCTGCTTTCTGGTCCCCAAAGTTACACCATGATGCTCAGCACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS GCA 90 bp | CTGATCATCATTGAAACTGCCACAGTGAACAGGCCTTCCTCATTATaGTTCTTGGACTCTGACGTGGATGGTAGCATCTCTCTGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LIIIETATVNRPSSL*FLDSDVDGSISLLP Trigger: AGGCAACAGAGAGATGCTACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGAAGGCCTGTTCACTGTGGCAGTTTCAATGATGATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | GTACAGAAACAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATAACTTTCTCAGGCCCATaGGCAGTTGAACAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VQKQTRMAFLPALSGSNITFSGP*AVEQMV Trigger: GACCATCTGTTCAACTGCCAATGGGCCTGAGAAAGT...TATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTGTTTCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | GTACAGAAACAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATAGAATGGAGAGTGTCTTaGTCTCCAGAAGTACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQKQTRMAFLPALSGSNIEWRVS*SPEVQP Trigger: AGGCTGTACTTCTGGAGACAAAGACACTCTCCATTC...TATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTGTTTCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | CAAAGCATTTTTCACTTATCTAGTTCCTTGTTGCAAATTCTTGCTGGATTTAGCTACCCACCAGCCACTTaGAGGTATACGGCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSIFHLSSSLLQILAGFSYPPAT*RYTAAS Trigger: GGAGGCCGCCGTATACCTCAAAGTGGCTGGTGGGTA...GCTAAATCCAGCAAGAATTTGCAACAAGGAACTAGATAAGTGAAAAATGCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTAGGATGGCCTTTCTTCCTGCCTTGTCTGGCAGCAACATACCTAACCTTCATTTCTCCATTCTCTaGAACCGTCATACTGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTRMAFLPALSGSNIPNLHFSIL*NRHTDL Trigger: CAAATCAGTATGACGGTTCAAGAGAATGGAGAAATG...AAGGTTAGGTATGTTGCTGCCAGACAAGGCAGGAAGAAAGGCCATCCTAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS-3UTR CAA 90 bp | GTCTTCTGGGCTCTTGCAATCATGATCTCACAGGTGCTAAAAACTGGCCCTTTCCCAATCGAACTGACTTaGAATCTTCATACAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFWALAIMISQVLKTGPFPIELT*NLHTGR Trigger: TCTTCCTGTATGAAGATTCAAAGTCAGTTCGATTGG...GAAAGGGCCAGTTTTTAGCACCTGTGAGATCATGATTGCAAGAGCCCAGAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
||
| CDS GCA 72 bp | GTCGCCAGCGTCGCCCTCCCGCGGTACTCCGTCATCTaGTGGCCCTCCTGCTCCTGGCCATCCCGGTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: VASVALPRYSVI*WPSCSWPSRYR Trigger: TCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGGGAGGGCGACGCTGGCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
||
| CDS CCA 72 bp | CCGCGGTACTCCGTCATCTGCTGGCCCTCCTGCTCCTaGCCATCCCGGTATAGAAGTACCGCTGTCGACCTC | + |
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Preference number: 6 (lower is better) Translates to: PRYSVICWPSCS*PSRYRSTAVDL Trigger: GAGGTCGACAGCGGTACTTCTATACCGGGATGGCCAGGAGCAGGAGGGCCAGCAGATGACGGAGTACCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS CAA 72 bp | CGAGGCGACACATCCCGTCTGTACCCACCAGCCACTTaGAGGTATACGGCGGCCTCCTCGAAGTCGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGDTSRLYPPAT*RYTAASSKSSL Trigger: CAACGACGACTTCGAGGAGGCCGCCGTATACCTCAAAGTGGCTGGTGGGTACAGACGGGATGTGTCGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
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| CDS TCA 72 bp | GAGGCGACACATCCCGTCTGTACCCACCAGCCACTTTaGGGTATACGGCGGCCTCCTCGAAGTCGTCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: EATHPVCTHQPL*GIRRPPRSRRC Trigger: ACAACGACGACTTCGAGGAGGCCGCCGTATACCTCAAAGTGGCTGGTGGGTACAGACGGGATGTGTCGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110434.2 |
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| CDS CCA 72 bp | CTCTCTGTTGCCTGTTCTCCACTGCACCTGAGGCTCTaGGTACCATCCAGAGGAGGTGCACTCCAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSVACSPLHLRL*VPSRGGALQLH Trigger: ATGGAGCTGGAGTGCACCTCCTCTGGATGGTACCCAGAGCCTCAGGTGCAGTGGAGAACAGGCAACAGAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 72 bp | GAAACCACAGCAGCTCCATGTATTCTGAGCTCGCGTTaGGGGAAAAGCCACAGGTCAGCTCGGCATCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ETTAAPCILSSR*GKSHRSARHLS Trigger: GCTCAGATGCCGAGCTGACCTGTGGCTTTTCCCCAAACGCGAGCTCAGAATACATGGAGCTGCTGTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS CCA 72 bp | TCGTCGTTGTCTTTGAAAAGGCACCGGTACTCCCCCTaGTCTGAGACCCTGACATCTCGGATCAGCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSLSLKRHRYSP*SETLTSRISRV Trigger: TACTCTGCTGATCCGAGATGTCAGGGTCTCAGACCAGGGGGAGTACCGGTGCCTTTTCAAAGACAACGACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041674.14 ENSMUST00000110434.2 |
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| CDS CAA 72 bp | GGTGAGAACGGGATCAGTTTAGAATGGAGAGTGTCTTaGTCTCCAGAAGTACAGCCTTCCCCCAGCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GENGISLEWRVS*SPEVQPSPSGD Trigger: GTCCCCGCTGGGGGAAGGCTGTACTTCTGGAGACAAAGACACTCTCCATTCTAAACTGATCCCGTTCTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 90 bp | GCTTGGCTAGGTGAGAACGGGATCAGTTTAGAATGGAGAGTGTCTTaGTCTCCAGAAGTACAGCCTTCCCCCAGCGGGGACAAGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: AWLGENGISLEWRVS*SPEVQPSPSGDKGM Trigger: CATTCCCTTGTCCCCGCTGGGGGAAGGCTGTACTTCTGGAGACAAAGACACTCTCCATTCTAAACTGATCCCGTTCTCACCTAGCCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CCA 72 bp | GCCGCTTGGCTAGGTGAGAACGGGATCAGTTTAGAATaGAGAGTGTCTTTGTCTCCAGAAGTACAGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AAWLGENGISLE*RVSLSPEVQPS Trigger: GGAAGGCTGTACTTCTGGAGACAAAGACACTCTCCATTCTAAACTGATCCCGTTCTCACCTAGCCAAGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS TCA 72 bp | TCCATTCTCTTGAACCGTCATACTGATTTGAGGATCTaGACCCACAGCAGCCACTTTGAGGTATACGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SILLNRHTDLRI*THSSHFEVYGG Trigger: GCCGCCGTATACCTCAAAGTGGCTGCTGTGGGTTCAGATCCTCAAATCAGTATGACGGTTCAAGAGAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CCA 72 bp | ACAGGCCTTCCTCATTATGCTTCTTGGACTCTGACGTaGATGGTAGCATCTCTCTGTTGCCTGTTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: TGLPHYASWTLT*MVASLCCLFST Trigger: AGTGGAGAACAGGCAACAGAGAGATGCTACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGAAGGCCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 72 bp | ACTGCCACAGTGAACAGGCCTTCCTCATTATGCTTCTaGGACTCTGACGTGGATGGTAGCATCTCTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: TATVNRPSSLCF*DSDVDGSISLL Trigger: CAACAGAGAGATGCTACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGAAGGCCTGTTCACTGTGGCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 90 bp | ATCATTGAAACTGCCACAGTGAACAGGCCTTCCTCATTATGCTTCTaGGACTCTGACGTGGATGGTAGCATCTCTCTGTTGCCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: IIETATVNRPSSLCF*DSDVDGSISLLPVL Trigger: GAGAACAGGCAACAGAGAGATGCTACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGAAGGCCTGTTCACTGTGGCAGTTTCAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS GCA 72 bp | ATTGAAACTGCCACAGTGAACAGGCCTTCCTCATTATaGTTCTTGGACTCTGACGTGGATGGTAGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: IETATVNRPSSL*FLDSDVDGSIS Trigger: AGAGATGCTACCATCCACGTCAGAGTCCAAGAAGCATAATGAGGAAGGCCTGTTCACTGTGGCAGTTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 72 bp | TCCAGAGTCACGTCAACTTCATGCAGTACAGTCTTTTaGCATCTGAGTTCTTCCAGAAGTCTCTCTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRVTSTSCSTVF*HLSSSRSLSLE Trigger: CTCTAAAGAGAGACTTCTGGAAGAACTCAGATGCAAAAAGACTGTACTGCATGAAGTTGACGTGACTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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| CDS CAA 72 bp | GAGCCAAATTCCTTCTTCCGCAGACTGGATCTTTCCTaGTATAGTTTCCAAGTGAAAAATATGGACCCAATG | + |
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Preference number: 6 (lower is better) Translates to: EPNSFFRRLDLS*YSFQVKNMDPM Trigger: CATTGGGTCCATATTTTTCACTTGGAAACTATACAAGGAAAGATCCAGTCTGCGGAAGAAGGAATTTGGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041674.14 |
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