Pregenerated sensors for BTLA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052013Ensembl transcript IDs: ENSMUST00000063654.6, ENSMUST00000102802.10
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCTTGTAAAAAGCTGGGCATGAGCAAATATAGTCTAGCAATGTaGGGGTCAGGGATGGGAGGATCCATCGCTGGCTTGCTGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: HPCKKLGMSKYSLAM*GSGMGGSIAGLLLA Trigger: AGCAAGCAGCAAGCCAGCGATGGATCCTCCCATCCCTGACCCCCACATTGCTAGACTATATTTGCTCATGCCCAGCTTTTTACAAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR TCA 90 bp | AAAACATTGTTTGTTGTTCTAGATTCAGGGAACTGGAACCCGAGGTaGGCAGTAGGTGAGAAAAGCTGTGTAGTAAGGCCTCTTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: KTLFVVLDSGNWNPR*AVGEKSCVVRPLYS Trigger: TGAATAAAGAGGCCTTACTACACAGCTTTTCTCACCTACTGCTCACCTCGGGTTCCAGTTCCCTGAATCTAGAACAACAAACAATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR GCA 90 bp | GTCCCTACGGATCAACTCAATATTCAAGATTCTCCTTTCATAAATTaGCCTTTGAGCTTGCTCTCACGTAAAGCAAAAGGTGGGCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: VPTDQLNIQDSPFIN*PLSLLSRKAKGGLK Trigger: TTTTAGCCCACCTTTTGCTTTACGTGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAATCTTGAATATTGAGTTGATCCGTAGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR GCA 90 bp | CTGATTCACTTCCTCAGAATCAAGAAACAGGCATTAATGAATGCATaGCAGTCCCTACGGATCAACTCAATATTCAAGATTCTCCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: LIHFLRIKKQALMNA*QSLRINSIFKILLS Trigger: TGAAAGGAGAATCTTGAATATTGAGTTGATCCGTAGGGACTGGCATGCATTCATTAATGCCTGTTTCTTGATTCTGAGGAAGTGAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR TCA 90 bp | CAACTCCCTTCCATTCTCACCAGTCTACGTGTTATTTTCTATAAATaGCTCATTTTCTCTAGTACTTTGCACCTTCTAAGCAAACTAAAA | + |
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Preference number: 1 (lower is better) Translates to: QLPSILTSLRVIFYK*LIFSSTLHLLSKLK Trigger: TTTTAGTTTGCTTAGAAGGTGCAAAGTACTAGAGAAAATGAGTCATTTATAGAAAATAACACGTAGACTGGTGAGAATGGAAGGGAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CAA 90 bp | AGTCTAGCAATGTGGGGGTCAGGGATGGGAGGATCCATCGCTGGCTaGCTGCTTGCTAGCAGAGCTCCAGGTTCAATGAGAGACCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLAMWGSGMGGSIAG*LLASRAPGSMRDLP Trigger: GGGAAGGTCTCTCATTGAACCTGGAGCTCTGCTAGCAAGCAGCAAGCCAGCGATGGATCCTCCCATCCCTGACCCCCACATTGCTAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTTCAGGAGAAATCCAGACAGAGGTATTaGCAGGCACTCATGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: FPGKSLSCTKLSQSFQEKSRQRY*QALMQC Trigger: ACACTGCATGAGTGCCTGTCAATACCTCTGTCTGGA...TTTCTCCTGAAAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR-3UTR GCA 90 bp | AATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTATTGACAGGCACTCATaGAGTGTAGGCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: NMSFPREESVLYKTLPKFIDRHS*SVGCLA Trigger: AGCCAGGCAGCCTACACTGCATGAGTGCCTGTCAAT...AAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAAAACTCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGTCCAGACAGAGGTATTaGCAGGCACTCATGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PAQSILIETFQVEGYLKLSRQRY*QALMQC Trigger: ACACTGCATGAGTGCCTGTCAATACCTCTGTCTGGA...CAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTGTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAATTGACAGGCACTCATaGAGTGTAGGCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VSLFGSSKENIEFTHWVRIDRHS*SVGCLA Trigger: AGCCAGGCAGCCTACACTGCATGAGTGCCTGTCAAT...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR CAA 90 bp | TTGCTCTCACGTAAAGCAAAAGGTGGGCTAAAAGTTCGCTCTAGATaGATAATATATCCATTCCCATGGACACTTGTTCATAGGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: LLSRKAKGGLKVRSR*IIYPFPWTLVHRPI Trigger: TATGGGCCTATGAACAAGTGTCCATGGGAATGGATATATTATCAATCTAGAGCGAACTTTTAGCCCACCTTTTGCTTTACGTGAGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR GCA 90 bp | ACATGTCTGAAAACATTGTTTGTTGTTCTAGATTCAGGGAACTGGAACCCGAGGGCACACCCACATATATaGATGCAATTACATAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TCLKTLFVVLDSGNWNPRAHPHI*MQLHRQ Trigger: CTGTCTATGTAATTGCATGCATATATGTGGGTGTGC...CCTCGGGTTCCAGTTCCCTGAATCTAGAACAACAAACAATGTTTTCAGACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR CCA 90 bp | ACATGTCTGAAAACATTGTTTGTTGTTCTAGATTCAGGGAACTGGAACCCGAGGGCACAGCAAAAGGACTaGTTTCTCTTGTCTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: TCLKTLFVVLDSGNWNPRAQQKD*FLLSYF Trigger: GAAATAAGACAAGAGAAACCAGTCCTTTTGCTGTGC...CCTCGGGTTCCAGTTCCCTGAATCTAGAACAACAAACAATGTTTTCAGACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CAA 90 bp | CAACTCAATATTCAAGATTCTCCTTTCATAAATTGCCCTTTGAGCTaGCTCTCACGTAAAGCAAAAGGTGGGCTAAAAGTTCGCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QLNIQDSPFINCPLS*LSRKAKGGLKVRSR Trigger: TCTAGAGCGAACTTTTAGCCCACCTTTTGCTTTACGTGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAATCTTGAATATTGAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CAA 90 bp | ATTTTCCTTTTAAAGCCGGAGACAATTCTGAAAGATTTGCTTAAGTaGCCTGTTGATCTGATAAGAGAGACAGAGTGCAGTACTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: IFLLKPETILKDLLK*PVDLIRETECSTHP Trigger: GGGATGAGTACTGCACTCTGTCTCTCTTATCAGATCAACAGGCAACTTAAGCAAATCTTTCAGAATTGTCTCCGGCTTTAAAAGGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR GCA 90 bp | TACATTCTCAACTCCCTTCCATTCTCACCAGTCTACGTGTTATTTTCTATAAATACAGGCATTAATGAATaGATGCCAGTCCCTACGGAT | + |
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Preference number: 2 (lower is better) Translates to: YILNSLPFSPVYVLFSINTGINE*MPVPTD Trigger: ATCCGTAGGGACTGGCATGCATTCATTAATGCCTGT...ATTTATAGAAAATAACACGTAGACTGGTGAGAATGGAAGGGAGTTGAGAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR TCA 90 bp | CATGCCAGTCCCTACGGATCAACTCAATATTCAAGATTCTCCTTTCATAAATTGTTGTCTTATCATGACTaGCTGAGAGCATACAATCAT | + |
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Preference number: 2 (lower is better) Translates to: HASPYGSTQYSRFSFHKLLSYHD*LRAYNH Trigger: ATGATTGTATGCTCTCAGTCAGTCATGATAAGACAA...CAATTTATGAAAGGAGAATCTTGAATATTGAGTTGATCCGTAGGGACTGGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAGTGGTTGTAACATGTCTGAAAACATTGTTTGTTGTTCTAGATTCAGGGTTAATCCAGCAGCATTaGATCACATTCATGTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LEVVVTCLKTLFVVLDSGLIQQH*ITFMCV Trigger: AACGCACATGAATGTGATTCAATGCTGCTGGATTAA...CCCTGAATCTAGAACAACAAACAATGTTTTCAGACATGTTACAACCACTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR GCA 90 bp | CTAGAAGTGGTTGTAACATGTCTGAAAACATTGTTTGTTGTTCTAGATTCAGGGTCTCCTTTCATAAATTaGCCTTTGAGCTTGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LEVVVTCLKTLFVVLDSGSPFIN*PLSLLS Trigger: TGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGA...CCCTGAATCTAGAACAACAAACAATGTTTTCAGACATGTTACAACCACTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR CCA 90 bp | TACATTCTCAACTCCCTTCCATTCTCACCAGTCTACGTGTTATTTTCTATAAATCGACATGGTGCGACATaGTCAATTTTAAAAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: YILNSLPFSPVYVLFSINRHGAT*SILKAL Trigger: TAGGGCTTTTAAAATTGACCATGTCGCACCATGTCG...ATTTATAGAAAATAACACGTAGACTGGTGAGAATGGAAGGGAGTTGAGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR CCA 90 bp | TACATTCTCAACTCCCTTCCATTCTCACCAGTCTACGTGTTATTTTCTATAAATATATATCCATTCCCATaGACACTTGTTCATAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: YILNSLPFSPVYVLFSINIYPFP*TLVHRP Trigger: GGGCCTATGAACAAGTGTCCATGGGAATGGATATAT...ATTTATAGAAAATAACACGTAGACTGGTGAGAATGGAAGGGAGTTGAGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CCA 72 bp | AAAAAGCTGGGCATGAGCAAATATAGTCTAGCAATGTaGGGGTCAGGGATGGGAGGATCCATCGCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: KKLGMSKYSLAM*GSGMGGSIAGL Trigger: CAAGCCAGCGATGGATCCTCCCATCCCTGACCCCCACATTGCTAGACTATATTTGCTCATGCCCAGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR TCA 72 bp | TTTGTTGTTCTAGATTCAGGGAACTGGAACCCGAGGTaGGCAGTAGGTGAGAAAAGCTGTGTAGTAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: FVVLDSGNWNPR*AVGEKSCVVRP Trigger: AGGCCTTACTACACAGCTTTTCTCACCTACTGCTCACCTCGGGTTCCAGTTCCCTGAATCTAGAACAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR GCA 72 bp | CTTAAGTTGCCTGTTGATCTGATAAGAGAGACAGAGTaGAGTACTCATCCCCCTCCCATCCTTCCTGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LKLPVDLIRETE*STHPPPILPVS Trigger: AGAAACAGGAAGGATGGGAGGGGGATGAGTACTGCACTCTGTCTCTCTTATCAGATCAACAGGCAACTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR CAA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGCAGGTTGAAGGTTATTaGAAACTGAAGGTCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKQVEGY*KLKVQT Trigger: TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTG...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR CCA 72 bp | CACTACCACGCTGATTGCAAATCCACTCACTATATGTaGATGAGCCCTTTACTACCTACCTTACTTTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: HYHADCKSTHYM*MSPLLPTLLSQ Trigger: TTGAGAAAGTAAGGTAGGTAGTAAAGGGCTCATCCACATATAGTGAGTGGATTTGCAATCAGCGTGGTAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGCACAGCAAAAGGACTGGTTTCTCTTGTCTTATTTCCAGGCGTCACATCTTCTCCTTTCATAAATaGCCCTTTGAGCTTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: KKHSKRTGFSCLISRRHIFSFHK*PFELAL Trigger: GAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAA...GATGTGACGCCTGGAAATAAGACAAGAGAAACCAGTCCTTTTGCTGTGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CCA 72 bp | ATTGAATTCACACATTGGGTACGACATGGTGCGACATaGTCAATTTTAAAAGCCCTATTATTCTGCTATTCG | + |
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Preference number: 3 (lower is better) Translates to: IEFTHWVRHGAT*SILKALLFCYS Trigger: CGAATAGCAGAATAATAGGGCTTTTAAAATTGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGTCTACGTGTTATTTTCTATAAATGACTCATTTTCTCTAGTACTTTGCACCCAGGTTGAAGGTTATTaGAAACTGAAGGTCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: PVYVLFSINDSFSLVLCTQVEGY*KLKVQT Trigger: TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTG...GGTGCAAAGTACTAGAGAAAATGAGTCATTTATAGAAAATAACACGTAGACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR GCA 72 bp | GATCAACTCAATATTCAAGATTCTCCTTTCATAAATTaGCCTTTGAGCTTGCTCTCACGTAAAGCAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: DQLNIQDSPFIN*PLSLLSRKAKG Trigger: ACCTTTTGCTTTACGTGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAATCTTGAATATTGAGTTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| 3UTR CCA 72 bp | TTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTaGGTACGACATGGTGCGACATGGTCAATTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: FGSSKENIEFTH*VRHGATWSILK Trigger: TTTTAAAATTGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| 3UTR CAA 72 bp | ATGTGGGGGTCAGGGATGGGAGGATCCATCGCTGGCTaGCTGCTTGCTAGCAGAGCTCCAGGTTCAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: MWGSGMGGSIAG*LLASRAPGSMR Trigger: TCTCATTGAACCTGGAGCTCTGCTAGCAAGCAGCAAGCCAGCGATGGATCCTCCCATCCCTGACCCCCACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS-3UTR TCA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGGATGGCAGTGCTTGGTaGTTTGTCCTGGAACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKDGSAW*FVLELA Trigger: AGCCAGTTCCAGGACAAATCACCAAGCACTGCCATC...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR TCA 90 bp | TTACATAGACAGTTTATGTGTTTGCTCCAGTGGCTTCTAACTCAGGCCCAATCTCATGGTGGATGGTCCTaGGGCATTGGTGGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHRQFMCLLQWLLTQAQSHGGWS*GIGGIW Trigger: CCAGATGCCACCAATGCCTCAGGACCATCCACCATG...AGATTGGGCCTGAGTTAGAAGCCACTGGAGCAAACACATAAACTGTCTATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | TTACATAGACAGTTTATGTGTTTGCTCCAGTGGCTTCTAACTCAGGCCCAATCTCAGCCAAGTCCTGCCTaGCCTCTCTTCCATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LHRQFMCLLQWLLTQAQSQPSPA*PLFHGG Trigger: TCCACCATGGAAGAGAGGCCAGGCAGGACTTGGCTG...AGATTGGGCCTGAGTTAGAAGCCACTGGAGCAAACACATAAACTGTCTATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS-3UTR TCA 90 bp | TCCAAAGAAAATATTGAATTCACACATTGGGTACGACATGGTGCGACATGGTCACATGGTGGATGGTCCTaGGGCATTGGTGGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKENIEFTHWVRHGATWSHGGWS*GIGGIW Trigger: CCAGATGCCACCAATGCCTCAGGACCATCCACCATG...TGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR GCA 90 bp | ACATGTCTGAAAACATTGTTTGTTGTTCTAGATTCAGGGAACTGGAACCCGAGGAAAGCAGCCAAGTCCTaGCTGGCCTCTCTTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: TCLKTLFVVLDSGNWNPRKAAKS*LASLPW Trigger: CCATGGAAGAGAGGCCAGGCAGGACTTGGCTGCTTT...CCTCGGGTTCCAGTTCCCTGAATCTAGAACAACAAACAATGTTTTCAGACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS-3UTR GCA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGGTTAGTGTCCCTTCCTaGCAAGTCAGAAGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKVSVPS*QVRRLL Trigger: AAGAAGCCTTCTGACTTGGCAGGAAGGGACACTAAC...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | CCCTATTATTCTGCTATTCGTAATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGCAGCCAAGTCCTGCCTaGCCTCTCTTCCATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PYYSAIRNMSFPREESVLQPSPA*PLFHGG Trigger: TCCACCATGGAAGAGAGGCCAGGCAGGACTTGGCTG...CAAGACAGACTCTTCCCTGGGAAAACTCATATTACGAATAGCAGAATAATAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR GCA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGTCTCACACAAATGGATaGATATTCTGTGGGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKSHTNG*IFCGCL Trigger: GAGGCACCCACAGAATATGCATCCATTTGTGTGAGA...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGATAACTCTCCTGTCCTaGCAGACTGTTTGGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKITLLS*QTVWNS Trigger: GGAATTCCAAACAGTCTGCCAGGACAGGAGAGTTAT...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTTCAGGAGAAAATGGTCCTGAGGCATTaGTGGCATCTGGGATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPGKSLSCTKLSQSFQEKMVLRH*WHLGCQ Trigger: CTGACATCCCAGATGCCACCAATGCCTCAGGACCAT...TTTCTCCTGAAAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR GCA 90 bp | TTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTTCAGGAGAAAAAGGAGCAGAAGCAATaGCCCCAAAGGAAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FPGKSLSCTKLSQSFQEKKEQKQ*PQRKQG Trigger: ACCTTGCTTCCTTTGGGGGCATTGCTTCTGCTCCTT...TTTCTCCTGAAAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTTCAGGAGAAACTCCAGAGGCCCAGATaGAGGATGAAGAATTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: FPGKSLSCTKLSQSFQEKLQRPR*RMKNSL Trigger: TAGGGAATTCTTCATCCTCCATCTGGGCCTCTGGAG...TTTCTCCTGAAAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGCACAGCAAAAGGACTGGTTTCTCTTGTCTTATTTCCAGGCGTCACATCCTCCAGAGGCCCAGATaGAGGATGAAGAATTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: KKHSKRTGFSCLISRRHILQRPR*RMKNSL Trigger: TAGGGAATTCTTCATCCTCCATCTGGGCCTCTGGAG...GATGTGACGCCTGGAAATAAGACAAGAGAAACCAGTCCTTTTGCTGTGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS-3UTR CCA 90 bp | AATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTCTGGCCTCTCTTCCATaGTGGATGGTCCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NMSFPREESVLYKTLPKFLASLP*WMVLRH Trigger: ATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAG...AAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAAAACTCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | AATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTGATGGCAGTGCTTGGTaGTTTGTCCTGGAACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMSFPREESVLYKTLPKFDGSAW*FVLELA Trigger: AGCCAGTTCCAGGACAAATCACCAAGCACTGCCATC...AAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAAAACTCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCACAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGATGGTCCTGAGGCATTaGTGGCATCTGGGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAQSILIETFQVEGYLKLMVLRH*WHLGCQ Trigger: CTGACATCCCAGATGCCACCAATGCCTCAGGACCAT...CAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTGTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGAACAAAAACCGGAACTaGTTGATTTTCTTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKNKNRN*LIFFPT Trigger: AGTTGGGAAGAAAATCAATCAGTTCCGGTTTTTGTT...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAAAAGCAGCCAAGTCCTaGCTGGCCTCTCTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLFGSSKENIEFTHWVRKAAKS*LASLPW Trigger: CCATGGAAGAGAGGCCAGGCAGGACTTGGCTGCTTT...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGACTGGCCTCTCTTCCATaGTGGATGGTCCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFGSSKENIEFTHWVRLASLP*WMVLRH Trigger: ATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAG...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | CCCTATTATTCTGCTATTCGTAATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGTGGATGCATATTCTGTaGGTGCCTCCTGCATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PYYSAIRNMSFPREESVLWMHIL*VPPACC Trigger: ACAACATGCAGGAGGCACCCACAGAATATGCATCCA...CAAGACAGACTCTTCCCTGGGAAAACTCATATTACGAATAGCAGAATAATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGAAAATATTGAATTCACACATTGGGTACGACATGGTGCGACATGGTCAGGCATTGGTGGCATCTaGGATGTCAGATACTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKENIEFTHWVRHGATWSGIGGI*DVRYCY Trigger: ATAACAGTATCTGACATCCCAGATGCCACCAATGCC...TGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063654.6 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGAAAATATTGAATTCACACATTGGGTACGACATGGTGCGACATGGTCAAATTCAGATTCATCCTaGATGCTAGACCAGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKENIEFTHWVRHGATWSNSDSS*MLDQGS Trigger: TGATCCCTGGTCTAGCATGCAGGATGAATCTGAATT...TGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | AATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGTACAAAACTCTCCCAAAGTTTTCTCACACAAATGGATaGATATTCTGTGGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NMSFPREESVLYKTLPKFSHTNG*IFCGCL Trigger: GAGGCACCCACAGAATATGCATCCATTTGTGTGAGA...AAACTTTGGGAGAGTTTTGTACAAGACAGACTCTTCCCTGGGAAAACTCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGAAAATATTGAATTCACACATTGGGTACGACATGGTGCGACATGGTCACTTGGTGATTTGTCCTaGAACTGGCTGGAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKENIEFTHWVRHGATWSLGDLS*NWLEYQ Trigger: TTGATATTCCAGCCAGTTCCAGGACAAATCACCAAG...TGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | TTACATAGACAGTTTATGTGTTTGCTCCAGTGGCTTCTAACTCAGGCCCAATCTAACAAAAACCGGAACTaGTTGATTTTCTTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LHRQFMCLLQWLLTQAQSNKNRN*LIFFPT Trigger: AGTTGGGAAGAAAATCAATCAGTTCCGGTTTTTGTT...AGATTGGGCCTGAGTTAGAAGCCACTGGAGCAAACACATAAACTGTCTATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAGTTAGTGTCCCTTCCTaGCAAGTCAGAAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFGSSKENIEFTHWVRVSVPS*QVRRLL Trigger: AAGAAGCCTTCTGACTTGGCAGGAAGGGACACTAAC...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACATGGATGCATATTCTGTaGGTGCCTCCTGCATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTWMHIL*VPPACC Trigger: ACAACATGCAGGAGGCACCCACAGAATATGCATCCA...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| 3UTR CAA 72 bp | CTCAATATTCAAGATTCTCCTTTCATAAATTGCCCTTaGAGCTTGCTCTCACGTAAAGCAAAAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LNIQDSPFINCP*SLLSRKAKGGL Trigger: TAGCCCACCTTTTGCTTTACGTGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAATCTTGAATATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCACAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGCTGGTTGTTTCTCTCTaGTTGCAAGCTAATTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAQSILIETFQVEGYLKLLVVSL*LQANCQ Trigger: TTGACAATTAGCTTGCAATCAGAGAGAAACAACCAG...CAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTGTGCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCAATTCAGATTCATCCTaGATGCTAGACCAGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QSILIETFQVEGYLKLKVNSDSS*MLDQGS Trigger: TGATCCCTGGTCTAGCATGCAGGATGAATCTGAATT...GACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACAATAACTCTCCTGTCCTaGCAGACTGTTTGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTITLLS*QTVWNS Trigger: GGAATTCCAAACAGTCTGCCAGGACAGGAGAGTTAT...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAGATTTGTCCTGGAACTaGCTGGAATATCAACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFGSSKENIEFTHWVRDLSWN*LEYQPG Trigger: ACCTGGTTGATATTCCAGCCAGTTCCAGGACAAATC...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACAGATTTGTCCTGGAACTaGCTGGAATATCAACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTDLSWN*LEYQPG Trigger: ACCTGGTTGATATTCCAGCCAGTTCCAGGACAAATC...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| 3UTR CAA 72 bp | ATTCAAGATTCTCCTTTCATAAATTGCCCTTTGAGCTaGCTCTCACGTAAAGCAAAAGGTGGGCTAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQDSPFINCPLS*LSRKAKGGLKV Trigger: AACTTTTAGCCCACCTTTTGCTTTACGTGAGAGCAAGCTCAAAGGGCAATTTATGAAAGGAGAATCTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCACAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGCAGATTGTTCCATTGTaGTTACACCAAGTCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: PAQSILIETFQVEGYLKLQIVPL*LHQVTL Trigger: TAATGTGACTTGGTGTAAGCACAATGGAACAATCTG...CAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTGTGCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACACTTGGTGATTTGTCCTaGAACTGGCTGGAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTLGDLS*NWLEYQ Trigger: TTGATATTCCAGCCAGTTCCAGGACAAATCACCAAG...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAAAAACCGGAACTGATTaGTTTTCTTCCCAACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLFGSSKENIEFTHWVRKTGTD*FSSQLV Trigger: CACTAGTTGGGAAGAAAATCAATCAGTTCCGGTTTT...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACACTGGTTGTTTCTCTCTaGTTGCAAGCTAATTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTLVVSL*LQANCQ Trigger: TTGACAATTAGCTTGCAATCAGAGAGAAACAACCAG...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR GCA 90 bp | ATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCAGACACAGATTGTTCCATTGTaGTTACACCAAGTCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: ILIETFQVEGYLKLKVQTQIVPL*LHQVTL Trigger: TAATGTGACTTGGTGTAAGCACAATGGAACAATCTG...TGTCTGGACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCTGTATTGGTTTAAAGTaGAGAACAAAAACCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSILIETFQVEGYLKLKVCIGLK*RTKTGT Trigger: AGTTCCGGTTTTTGTTCTCCACTTTAAACCAATACA...GACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS CCA 90 bp | GCAAGGTGTAAAGCAGCCAAGTCCTGCCTGGCCTCTCTTCCATGGTaGATGGTCCTGAGGCATTGGTGGCATCTGGGATGTCAGATACTG | + |
|
Preference number: 5 (lower is better) Translates to: ARCKAAKSCLASLPW*MVLRHWWHLGCQIL Trigger: CAGTATCTGACATCCCAGATGCCACCAATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAGGCAGGACTTGGCTGCTTTACACCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063654.6 |
||
| CDS CCA 90 bp | GAAGCAAGGTGTAAAGCAGCCAAGTCCTGCCTGGCCTCTCTTCCATaGTGGATGGTCCTGAGGCATTGGTGGCATCTGGGATGTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: EARCKAAKSCLASLP*WMVLRHWWHLGCQI Trigger: TATCTGACATCCCAGATGCCACCAATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAGGCAGGACTTGGCTGCTTTACACCTTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS CCA 90 bp | GCAAGGTGTAAAGCAGCCAAGTCCTGCCTGGCCTCTCTTCCATGGTaGATGGTCCTGAGGCATTGGTGGCATCTGGGATGTCAGATATTA | + |
|
Preference number: 5 (lower is better) Translates to: ARCKAAKSCLASLPW*MVLRHWWHLGCQIL Trigger: TAATATCTGACATCCCAGATGCCACCAATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAGGCAGGACTTGGCTGCTTTACACCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS GCA 90 bp | TGTCCTGGAACTGGCTGGAATATCAACCAGGTTAGTGTCCCTTCCTaGCAAGTCAGAAGGCTTCTTTTCTTTCCCTTGGATCCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPGTGWNINQVSVPS*QVRRLLFFPLDPFQ Trigger: CTGAAAAGGATCCAAGGGAAAGAAAAGAAGCCTTCTGACTTGGCAGGAAGGGACACTAACCTGGTTGATATTCCAGCCAGTTCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS CCA 90 bp | TTCCTCTTAGTAGCTTTCTCACAAAGGATGCTCCAGAGGCCCAGATaGAGGATGAAGAATTCCCTAAATAACCGAGGAGTCCCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FLLVAFSQRMLQRPR*RMKNSLNNRGVPSM Trigger: CATGCTTGGGACTCCTCGGTTATTTAGGGAATTCTTCATCCTCCATCTGGGCCTCTGGAGCATCCTTTGTGAGAAAGCTACTAAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGAAAATATTGAATTCACACATTGGGTACGACATGGTGCGACATGGTCAGATGGTCCTGAGGCATaGGTGGCATCTGGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKENIEFTHWVRHGATWSDGPEA*VASGMS Trigger: TGACATCCCAGATGCCACCAATGCCTCAGGACCATC...TGACCATGTCGCACCATGTCGTACCCAATGTGTGAATTCAATATTTTCTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS TCA 90 bp | ATCCTGCATGCTAGACCAGGGATCATTATCATAAATTCCAGTTCCTaGTGGCAGTGCTTGGTGATTTGTCCTGGAACTGGCTGGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: ILHARPGIIIINSSS*WQCLVICPGTGWNI Trigger: GATATTCCAGCCAGTTCCAGGACAAATCACCAAGCACTGCCATCAGGAACTGGAATTTATGATAATGATCCCTGGTCTAGCATGCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | CTTACTTTCTCAATCAAGCCAGCTGAAGGTGAGCATCTCACTGGTGGGGATAAGACACAGATTGTTCCATaGTGCTTACACCAAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTFSIKPAEGEHLTGGDKTQIVP*CLHQVT Trigger: TGTGACTTGGTGTAAGCACAATGGAACAATCTGTGT...CTTATCCCCACCAGTGAGATGCTCACCTTCAGCTGGCTTGATTGAGAAAGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTCCCTACGGATCAACTCAATATTCAAGATTCTCCTTTCATAAATTGGATGGTCCTGAGGCATaGGTGGCATCTGGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HASPYGSTQYSRFSFHKLDGPEA*VASGMS Trigger: TGACATCCCAGATGCCACCAATGCCTCAGGACCATC...CAATTTATGAAAGGAGAATCTTGAATATTGAGTTGATCCGTAGGGACTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCACAGCAAAAGGACTGGTTTCTCTTGTCTTATTTCCAGGCGTCACATCGGTGCCTCCTGCATGTaGTTTTCCTGTCTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KKHSKRTGFSCLISRRHIGASCM*FSCLGF Trigger: GAATCCAAGACAGGAAAACAACATGCAGGAGGCACC...GATGTGACGCCTGGAAATAAGACAAGAGAAACCAGTCCTTTTGCTGTGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | CCCTATTATTCTGCTATTCGTAATATGAGTTTTCCCAGGGAAGAGTCTGTCTTGGGTGCCTCCTGCATGTaGTTTTCCTGTCTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: PYYSAIRNMSFPREESVLGASCM*FSCLGF Trigger: GAATCCAAGACAGGAAAACAACATGCAGGAGGCACC...CAAGACAGACTCTTCCCTGGGAAAACTCATATTACGAATAGCAGAATAATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | TTACATAGACAGTTTATGTGTTTGCTCCAGTGGCTTCTAACTCAGGCCCAATCTACACAGATTGTTCCATaGTGCTTACACCAAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LHRQFMCLLQWLLTQAQSTQIVP*CLHQVT Trigger: TGTGACTTGGTGTAAGCACAATGGAACAATCTGTGT...AGATTGGGCCTGAGTTAGAAGCCACTGGAGCAAACACATAAACTGTCTATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCTGTTTGGTAGTTCCAAAGAAAATATTGAATTCACACATTGGGTACGAGCAGTGCTTGGTGATTaGTCCTGGAACTGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSLFGSSKENIEFTHWVRAVLGD*SWNWLE Trigger: TTCCAGCCAGTTCCAGGACAAATCACCAAGCACTGC...TCGTACCCAATGTGTGAATTCAATATTTTCTTTGGAACTACCAAACAGACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS-3UTR CAA 90 bp | TACATTCTCAACTCCCTTCCATTCTCACCAGTCTACGTGTTATTTTCTATAAATGCAGTGCTTGGTGATTaGTCCTGGAACTGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YILNSLPFSPVYVLFSINAVLGD*SWNWLE Trigger: TTCCAGCCAGTTCCAGGACAAATCACCAAGCACTGC...ATTTATAGAAAATAACACGTAGACTGGTGAGAATGGAAGGGAGTTGAGAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS TCA 90 bp | TCTGGGATGTCAGATACTGTTATTAGTGGGTGTTCTGAAGAGTTTTaGGTCCTTTCTGTCACATGGATGGTTACTGAATGGCTATTAATA | + |
|
Preference number: 5 (lower is better) Translates to: SGMSDTVISGCSEEF*VLSVTWMVTEWLLI Trigger: TATTAATAGCCATTCAGTAACCATCCATGTGACAGAAAGGACTCAAAACTCTTCAGAACACCCACTAATAACAGTATCTGACATCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063654.6 |
||
| CDS TCA 90 bp | ACAATGGTTCAAAGAAGCATAAACAATGCCCTGGTTGTTTCTCTCTaGTTGCAAGCTAATTGTCAATTCAGATTCATCCTGCATGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TMVQRSINNALVVSL*LQANCQFRFILHAR Trigger: TCTAGCATGCAGGATGAATCTGAATTGACAATTAGCTTGCAATCAGAGAGAAACAACCAGGGCATTGTTTATGCTTCTTTGAACCATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
||
| CDS TCA 90 bp | GCATCTGGGATGTCAGATATTATTAGTGGGTGTTCTGAAGAGTTTTaGGTCCTTTCTGTCACATGGATGGTTACTGAATGGCTATTAATA | + |
|
Preference number: 5 (lower is better) Translates to: ASGMSDIISGCSEEF*VLSVTWMVTEWLLI Trigger: TATTAATAGCCATTCAGTAACCATCCATGTGACAGAAAGGACTCAAAACTCTTCAGAACACCCACTAATAATATCTGACATCCCAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
||
| CDS TCA 90 bp | GTCCTTTCTGTCACATGGATGGTTACTGAATGGCTATTAATAACTTaGGAATTGAAGTTTGTAGAACAGCTATACGACCCATTATCACTG | + |
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Preference number: 5 (lower is better) Translates to: VLSVTWMVTEWLLIT*ELKFVEQLYDPLSL Trigger: CAGTGATAATGGGTCGTATAGCTGTTCTACAAACTTCAATTCTCAAGTTATTAATAGCCATTCAGTAACCATCCATGTGACAGAAAGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS-3UTR CAA 90 bp | CAGAGCATCTTAATTGAAACTTTCCAGGTTGAAGGTTATTTGAAACTGAAGGTCCTTCTTTTCTTTCCCTaGGATCCTTTTCAGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QSILIETFQVEGYLKLKVLLFFP*DPFQKA Trigger: TGCTTTCTGAAAAGGATCCAAGGGAAAGAAAAGAAG...GACCTTCAGTTTCAAATAACCTTCAACCTGGAAAGTTTCAATTAAGATGCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS CCA 72 bp | CTGGCCTCTCTTCCATGGTGGATGGTCCTGAGGCATTaGTGGCATCTGGGATGTCAGATACTGTTATTAGTG | + |
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Preference number: 6 (lower is better) Translates to: LASLPWWMVLRH*WHLGCQILLLV Trigger: CACTAATAACAGTATCTGACATCCCAGATGCCACCAATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063654.6 |
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| CDS CCA 72 bp | CTGGCCTCTCTTCCATGGTGGATGGTCCTGAGGCATTaGTGGCATCTGGGATGTCAGATATTATTAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LASLPWWMVLRH*WHLGCQILLVG Trigger: ACCCACTAATAATATCTGACATCCCAGATGCCACCAATGCCTCAGGACCATCCACCATGGAAGAGAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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| CDS CCA 72 bp | GTAGCTTTCTCACAAAGGATGCTCCAGAGGCCCAGATaGAGGATGAAGAATTCCCTAAATAACCGAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VAFSQRMLQRPR*RMKNSLNNRGV Trigger: GACTCCTCGGTTATTTAGGGAATTCTTCATCCTCCATCTGGGCCTCTGGAGCATCCTTTGTGAGAAAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS TCA 72 bp | GCTAGACCAGGGATCATTATCATAAATTCCAGTTCCTaGTGGCAGTGCTTGGTGATTTGTCCTGGAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: ARPGIIIINSSS*WQCLVICPGTG Trigger: GCCAGTTCCAGGACAAATCACCAAGCACTGCCATCAGGAACTGGAATTTATGATAATGATCCCTGGTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS GCA 72 bp | ACTGGCTGGAATATCAACCAGGTTAGTGTCCCTTCCTaGCAAGTCAGAAGGCTTCTTTTCTTTCCCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TGWNINQVSVPS*QVRRLLFFPLD Trigger: ATCCAAGGGAAAGAAAAGAAGCCTTCTGACTTGGCAGGAAGGGACACTAACCTGGTTGATATTCCAGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS GCA 72 bp | CTCACACAAATGGATGCATATTCTGTGGGTGCCTCCTaGATGTTGTTTTCCTGTCTTGGATTCCTTCCAATA | + |
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Preference number: 6 (lower is better) Translates to: LTQMDAYSVGAS*MLFSCLGFLPI Trigger: TATTGGAAGGAATCCAAGACAGGAAAACAACATGCAGGAGGCACCCACAGAATATGCATCCATTTGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS TCA 72 bp | TCAGATACTGTTATTAGTGGGTGTTCTGAAGAGTTTTaGGTCCTTTCTGTCACATGGATGGTTACTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: SDTVISGCSEEF*VLSVTWMVTEW Trigger: CCATTCAGTAACCATCCATGTGACAGAAAGGACTCAAAACTCTTCAGAACACCCACTAATAACAGTATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063654.6 |
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| CDS TCA 72 bp | CAAAGAAGCATAAACAATGCCCTGGTTGTTTCTCTCTaGTTGCAAGCTAATTGTCAATTCAGATTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: QRSINNALVVSL*LQANCQFRFIL Trigger: CAGGATGAATCTGAATTGACAATTAGCTTGCAATCAGAGAGAAACAACCAGGGCATTGTTTATGCTTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063654.6 ENSMUST00000102802.10 |
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| CDS TCA 72 bp | ATGTCAGATATTATTAGTGGGTGTTCTGAAGAGTTTTaGGTCCTTTCTGTCACATGGATGGTTACTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: MSDIISGCSEEF*VLSVTWMVTEW Trigger: CCATTCAGTAACCATCCATGTGACAGAAAGGACTCAAAACTCTTCAGAACACCCACTAATAATATCTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102802.10 |
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