Pregenerated sensors for BTK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031264Ensembl transcript IDs: ENSMUST00000033617.13, ENSMUST00000113213.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGGGAAGGCTAGAGCCCTaGAGCCAGGGAACTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVGRLEP*SQGTPQ Trigger: CTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCC...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTGGCACAGAAATCCCTTaGCCTTTGCTTAGAGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QAVGQLVELFTVFPPPKCGTEIP*PLLRAV Trigger: TACTGCTCTAAGCAAAGGTCAAGGGATTTCTGTGCC...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGGGTATATACCCTCTCTaGTGCCAGATGAGGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMGIYPL*CQMRPV Trigger: TACAGGCCTCATCTGGCATCAGAGAGGGTATATACC...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGGCCAGCAGCTGTACATaGTGGTATATACCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMASSCT*WYIPSL Trigger: CAGAGAGGGTATATACCATCATGTACAGCTGCTGGC...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGTTTTCAGCTCGGTTGTaGAGATTGGTGCTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMFSARL*RLVLLL Trigger: CAACAGCAGCACCAATCTCCACAACCGAGCTGAAAA...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGGTAATACTGGCTCTGTaGCGTGGAACACACAACGTA | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMVILAL*RGTHNV Trigger: TACGTTGTGTGTTCCACGCCACAGAGCCAGTATTAC...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGGCTCCTTCAAGAAGGTaGGGTCCTTTGGATCAATTT | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMAPSRR*GPLDQF Trigger: AAATTGATCCAAAGGACCTCACCTTCTTGAAGGAGC...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR CCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGAGTGATATAGTTACTTaGGATGTAGCCTTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMSDIVT*DVAFLP Trigger: GGGCAGGAAGGCTACATCCCAAGTAACTATATCACT...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAAGCAGCTGCTGTGTCTaGAAGCGGTGCCGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSSSCCV*KRCRIS Trigger: GGAGATGCGGCACCGCTTCCAGACACAGCAGCTGCT...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR TCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGCTCAGGGATGGTGCTaGAGAGGTGTTTCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQAQGWC*RGVSQP Trigger: TGGCTGAGAAACACCTCTTCAGCACCATCCCTGAGC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGCTGCCAGGTCTCTGTaGAGGAACTGCTTCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGAARSL*RNCFDS Trigger: GGAGTCGAAGCAGTTCCTTCACAGAGACCTGGCAGC...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR GCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGTTGAACCTTTCTTACTaGCTCTTCTCCCACGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMLNLSY*LFSHVQ Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAAGGTTCAA...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGCTGTTTCAACACAGGTaGTCTTCTCAACATCTATTG | + |
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Preference number: 4 (lower is better) Translates to: VGAWKARALQPGNSSGNMLFQHR*SSQHLL Trigger: CAATAGATGTTGAGAAGATCACCTGTGTTGAAACAG...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCCACATCTCAAGCAGCTaGTGTGTCTGGAAGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSHISSS*CVWKRC Trigger: GCACCGCTTCCAGACACAGCAGCTGCTTGAGATGTG...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR TCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGAGCAGTTGCTCAGCTTaGCTTCGAGTCATGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGSSCSA*LRVMCL Trigger: CAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCT...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCAGACGCCATACAACTaGACCAGCTTCTCATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGQTPYN*TSFSWE Trigger: TTCCCATGAGAAGCTGGTGCAGTTGTATGGCGTCTG...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR GCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCATGGGGCGTTGTTTGGTaGAGACGCCATACAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSWGVVW*RRHTTA Trigger: TGCAGTTGTATGGCGTCTGCACCAAACAACGCCCCA...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAACTGGCTCTGTGGCGTaGAACACACAACGTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGTGSVA*NTQRNG Trigger: GCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGT...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAACCGGACTGGAAACTTaGAGCCTACAGAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGTGLET*SLQSWC Trigger: ACACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGT...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGTGGAGACCACCGGACTaGAAACTTGGAGCCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTEWRPPD*KLGAYR Trigger: TCTGTAGGCTCCAAGTTTCCAGTCCGGTGGTCTCCA...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGCATAAGCACTTCTGGTaGAGACCACCGGACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQHKHFW*RPPDWK Trigger: TTTCCAGTCCGGTGGTCTCCACCAGAAGTGCTTATG...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGACCGGATTACATTTTTaGGCTGGTGAATCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQTGLHF*AGESSA Trigger: AGCGCTGGATTCACCAGCTCAAAAATGTAATCCGGT...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCGCATTCTTGGCTGTCTaGGAGCAGCAGAGATACTGT | + |
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Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSAFLAV*EQQRYC Trigger: ACAGTATCTCTGCTGCTCTCAGACAGCCAAGAATGC...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGCATTCTTGGCTGTCTaGGAGCAGCAGAGATACTGT | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGAFLAV*EQQRYC Trigger: ACAGTATCTCTGCTGCTCTCAGACAGCCAAGAATGC...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCGGTATATACCCTCTCTaGTGCCAGATGAGGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSGIYPL*CQMRPV Trigger: TACAGGCCTCATCTGGCATCAGAGAGGGTATATACC...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGGCCAGCAGCTGTACATaGTGGTATATACCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTEASSCT*WYIPSL Trigger: CAGAGAGGGTATATACCATCATGTACAGCTGCTGGC...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGAGCGCTTCAGAAAGATaGTCTCCAGTATCACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQSASER*SPVSLQ Trigger: CTGCAGTGATACTGGAGAGCATCTTTCTGAAGCGCT...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGTCATCTGCTTTCTCGTaGCAGCAGCTGTACATGATG | + |
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Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQSSAFS*QQLYMM Trigger: CATCATGTACAGCTGCTGGCACGAGAAAGCAGATGA...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGGATCTGATCTTCCTCTaGGGTAGGGGGAAGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVDLIFL*GRGKRL Trigger: AAGCCTCTTCCCCCTACCCCAGAGGAAGATCAGATC...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGACTGGCTCTGTGGCGTaGAACACACAACGTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVTGSVA*NTQRNG Trigger: GCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGTGGAGCCTACAGAGCTaGTGTACTCATCATCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGWSLQS*CTHHQG Trigger: TCCTTGATGATGAGTACACCAGCTCTGTAGGCTCCA...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGACCGGACTGGAAACTTaGAGCCTACAGAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVTGLET*SLQSWC Trigger: ACACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTGGAGACCACCGGACTaGAAACTTGGAGCCTACAGA | + |
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Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVWRPPD*KLGAYR Trigger: TCTGTAGGCTCCAAGTTTCCAGTCCGGTGGTCTCCA...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAATACATAAGCACTTCTaGTGGAGACCACCGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSIHKHF*WRPPDW Trigger: CCAGTCCGGTGGTCTCCACCAGAAGTGCTTATGTAT...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR CCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCATACATAAGCACTTCTaGTGGAGACCACCGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSIHKHF*WRPPDW Trigger: CCAGTCCGGTGGTCTCCACCAGAAGTGCTTATGTAT...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGACATTTTTGAGCTGGTaGATCCAGCGCTTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTETFLSW*IQRFLS Trigger: GCTGAGAAAGCGCTGGATTCACCAGCTCAAAAATGT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAACATTTTTGAGCTGGTaGATCCAGCGCTTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSTFLSW*IQRFLS Trigger: GCTGAGAAAGCGCTGGATTCACCAGCTCAAAAATGT...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAACCGGATTACATTTTTaGGCTGGTGAATCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGTGLHF*AGESSA Trigger: AGCGCTGGATTCACCAGCTCAAAAATGTAATCCGGT...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGAGCAGTTGCTCAGCTTaGCTTCGAGTCATGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVSSCSA*LRVMCL Trigger: CAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCAGCGCTTCAGAAAGATaGTCTCCAGTATCACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSSASER*SPVSLQ Trigger: CTGCAGTGATACTGGAGAGCATCTTTCTGAAGCGCT...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGACCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGPSFPS*FSSCSA Trigger: AGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGACCTGGATATGAGGCCTaGAGAGTTGTGTTGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGPGYEA*RVVLMV Trigger: TACCATCAACACAACTCTGCAGGCCTCATATCCAGG...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR GCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTTCACAGACATCTTTaGACATCTCAAGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGLHRHL*TSQAAA Trigger: AGCAGCTGCTTGAGATGTGCAAAGATGTCTGTGAAG...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
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| CDS-3UTR GCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCTCATCTGCTTTCTCGTaGCAGCAGCTGTACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSSSAFS*QQLYMM Trigger: CATCATGTACAGCTGCTGGCACGAGAAAGCAGATGA...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGATTTTCAGCTCGGTTGTaGAGATTGGTGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGFSARL*RLVLLL Trigger: CAACAGCAGCACCAATCTCCACAACCGAGCTGAAAA...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGTAATACTGGCTCTGTaGCGTGGAACACACAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSVILAL*RGTHNV Trigger: TACGTTGTGTGTTCCACGCCACAGAGCCAGTATTAC...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGAGATGGGGCGTTGTTTaGTGCAGACGCCATACAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVRWGVV*CRRHTT Trigger: AGTTGTATGGCGTCTGCACCAAACAACGCCCCATCT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGTGGAGCCTACAGAGCTaGTGTACTCATCATCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTEWSLQS*CTHHQG Trigger: TCCTTGATGATGAGTACACCAGCTCTGTAGGCTCCA...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGCATAAGCACTTCTGGTaGAGACCACCGGACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVHKHFW*RPPDWK Trigger: TTTCCAGTCCGGTGGTCTCCACCAGAAGTGCTTATG...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCACTTTGGCTTCTTCAATaGATTCATCCTCCGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSLWLLQ*IHPPTW Trigger: CCATGTCGGAGGATGAATTCATTGAAGAAGCCAAAG...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTCCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVGQLVELFTVFPPPKCPSFPS*FSSCSA Trigger: AGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGTCTCAGCTCTTCAGTTaGGGAGAAAACATAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTESQLFS*GENIER Trigger: CCTCTCTATGTTTTCTCCCCAACTGAAGAGCTGAGA...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCTCTCAGCTCTTCAGTTaGGGAGAAAACATAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSSQLFS*GENIER Trigger: CCTCTCTATGTTTTCTCCCCAACTGAAGAGCTGAGA...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGAGTGATATAGTTACTTaGGATGTAGCCTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTESDIVT*DVAFLP Trigger: GGGCAGGAAGGCTACATCCCAAGTAACTATATCACT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGAAACAGGCGCTTCTTaGAGTTTAAAGGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQETGAS*SLKVMF Trigger: AAACATCACCTTTAAACTTCAAGAAGCGCCTGTTTC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTTCTCAACATCTATTaGACCTTTCTTACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGLLNIY*TFLTAS Trigger: AGAGGCAGTAAGAAAGGTTCAATAGATGTTGAGAAG...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGATGTTTTCTTTTTCTaGTGGGAGCGCTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGDVFFF*WERFRK Trigger: CTTTCTGAAGCGCTCCCAGCAGAAAAAGAAAACATC...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCATTGAACCTTTCTTACTaGCTCTTCTCCCACGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSLNLSY*LFSHVQ Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAAGGTTCAA...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGATATACAACCTGGAATaGGTACGGGAACCTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEQYAREREKKGIPRCPGIYNLE*VREPFN Trigger: ATTGAAAGGTTCCCGTACCCATTCCAGGTTGTATAT...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGTCATTTGCGTTCATTaGCATGTAATCATAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQVICVH*HVIIKG Trigger: GCCCTTTATGATTACATGCCAATGAACGCAAATGAC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGAAACAGGCGCTTCTTaGAGTTTAAAGGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSETGAS*SLKVMF Trigger: AAACATCACCTTTAAACTTCAAGAAGCGCCTGTTTC...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGACTCCAAGTATTCCATTaGTTCACAGACATCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRKHGIRFCRREEEIHGLQVFH*FTDIFA Trigger: TGCAAAGATGTCTGTGAAGCAATGGAATACTTGGAG...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR GCA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGTTGAGCAATGTGTTCTaGTGTCTCACTGTTAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNERRKAFLDVQGSSCIQLSNVF*CLTVSK Trigger: TTTACTAACAGTGAGACAGCAGAACACATTGCTCAA...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGATATACAACCTGGAATaGGTACGGGAACCTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTEIYNLE*VREPFN Trigger: ATTGAAAGGTTCCCGTACCCATTCCAGGTTGTATAT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGTCATTTGCGTTCATTaGCATGTAATCATAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSVICVH*HVIIKG Trigger: GCCCTTTATGATTACATGCCAATGAACGCAAATGAC...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGTTCGAGTCATGTGCTTaGAATACCACTCATACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNMELGFVGERRRSTEFESCA*NTTHTS Trigger: AGATGTATGAGTGGTATTCCAAGCACATGACTCGAA...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTCTTCTCAACATCTATTaGACCTTTCTTACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVGQLVELFTVFPPPKCLLNIY*TFLTAS Trigger: AGAGGCAGTAAGAAAGGTTCAATAGATGTTGAGAAG...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCACGGGAACCTTTCAATaGTTGAAATCTGTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSTGTFQ*LKSVPF Trigger: AAATGGAACAGATTTCAATCATTGAAAGGTTCCCGT...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAACTTTCACAACTCCTTaGTCGTTTACCAAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: REREKKGIPRCPGLFMHSTFTTP*SFTKQF Trigger: AAACTGTTTGGTAAACGATCAAGGAGTTGTGAAAGT...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR GCA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCTTGAGCAATGTGTTCTaGTGTCTCACTGTTAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSLSNVF*CLTVSK Trigger: TTTACTAACAGTGAGACAGCAGAACACATTGCTCAA...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGACGGGAACCTTTCAATaGTTGAAATCTGTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVTGTFQ*LKSVPF Trigger: AAATGGAACAGATTTCAATCATTGAAAGGTTCCCGT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTACTTTCACAACTCCTTaGTCGTTTACCAAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAVGQLVELFTVFPPPKCTFTTP*SFTKQF Trigger: AAACTGTTTGGTAAACGATCAAGGAGTTGTGAAAGT...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGATGGCGGATCACCCCTaGAGGCTCCCCAGTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: VGAWKARALQPGNSSGNMMADHP*RLPSRF Trigger: AAATCTACTGGGGAGCCTCAAGGGGTGATCCGCCAT...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CCA 90 bp | GATGGTGCTGAAGAGGTGTTTCTCAGCCAGGTAATACTGGCTCTGTaGCGTGGAACACACAACGTAATGGCGGATCACCCCTTGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGAEEVFLSQVILAL*RGTHNVMADHPLRL Trigger: GAGCCTCAAGGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCTGAGAAACACCTCTTCAGCACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CCA 90 bp | TTACCAAACAGTTTCGAGCTGCCAGGTAATACTGGCTCTGTGGCGTaGAACACACAACGTAATGGCGGATCACCCCTTGAGGCTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNSFELPGNTGSVA*NTQRNGGSPLEAPQ Trigger: CTGGGGAGCCTCAAGGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCAGCTCGAAACTGTTTGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGAGATTGGTGCTGCTGTaGGCTCCGGGGGAAGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GNERRKAFLDVQGSSCIQRLVLL*APGEAV Trigger: AACCGCTTCCCCCGGAGCCAACAGCAGCACCAATCT...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGCTCGGTTGTGGAGATaGGTGCTGCTGTTGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GNERRKAFLDVQGSSCIQARLWR*VLLLAP Trigger: CGGAGCCAACAGCAGCACCAATCTCCACAACCGAGC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAAGATTGGTGCTGCTGTaGGCTCCGGGGGAAGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRKHGIRFCRREEEIHGRLVLL*APGEAV Trigger: AACCGCTTCCCCCGGAGCCAACAGCAGCACCAATCT...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGCTTCGAGTCATGTGCTaGGAATACCACTCATACATC | + |
|
Preference number: 5 (lower is better) Translates to: VGAWKARALQPGNSSGNMLRVMC*EYHSYI Trigger: GATGTATGAGTGGTATTCCAAGCACATGACTCGAAG...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCACCGGACTGGAAACTaGGAGCCTACAGAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEQYAREREKKGIPRCPGHRTGN*EPTELV Trigger: CACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGTG...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCCACCGGACTGGAAACTaGGAGCCTACAGAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSHRTGN*EPTELV Trigger: CACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGTG...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS GCA 90 bp | GGAACTGCTTCGACTCCAAGTATTCCATTGCTTCACAGACATCTTTaGACATCTCAAGCAGCTGCTGTGTCTGGAAGCGGTGCCGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GTASTPSIPLLHRHL*TSQAAAVSGSGAAS Trigger: AGATGCGGCACCGCTTCCAGACACAGCAGCTGCTTGAGATGTGCAAAGATGTCTGTGAAGCAATGGAATACTTGGAGTCGAAGCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGCCTTTTTCAGCTCGGTaGTGGAGATTGGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNERRKAFLDVQGSSCIQPFSAR*WRLVLL Trigger: CAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGG...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGAGTCATTTGCGTTCATaGGCATGTAATCATAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGAWKARALQPGNSSGNMSHLRS*ACNHKG Trigger: CCCTTTATGATTACATGCCAATGAACGCAAATGACT...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCATGGCGGATCACCCCTaGAGGCTCCCCAGTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSMADHP*RLPSRF Trigger: AAATCTACTGGGGAGCCTCAAGGGGTGATCCGCCAT...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 90 bp | ATTTCACGACACCGAATTGTCCAGTCCCAAGCTCCTTCAAGAAGGTaGGGTCCTTTGGATCAATTTCCCATGATCCATAGCCCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISRHRIVQSQAPSRR*GPLDQFPMIHSPGL Trigger: CAGGCCTGGGCTATGGATCATGGGAAATTGATCCAAAGGACCTCACCTTCTTGAAGGAGCTTGGGACTGGACAATTCGGTGTCGTGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGACCTTTTTCAGCTCGGTaGTGGAGATTGGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRKHGIRFCRREEEIHGPFSAR*WRLVLL Trigger: CAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGG...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGATGGCCACATCATATaGGCCCCTCCACTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: REREKKGIPRCPGLFMHSDGHII*APPLPI Trigger: TATGGGAAGTGGAGGGGCCAATATGATGTGGCCATC...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGAAGATGGGGCGTTGTTaGGTGCAGACGCCATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGNMELGFVGERRRSTEKMGRC*VQTPYN Trigger: GTTGTATGGCGTCTGCACCAAACAACGCCCCATCTT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGATGAAGATGGGGCGTaGTTTGGTGCAGACGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LLRKHGIRFCRREEEIHGDEDGA*FGADAI Trigger: TATGGCGTCTGCACCAAACAACGCCCCATCTTCATC...TCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGCATGGAAGGCTAGAGCCCTGCAGCCAGGGAACTCCTCAGGAAACATGTACTTTCACAACTCCTaGATCGTTTACCAAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGAWKARALQPGNSSGNMYFHNS*IVYQTV Trigger: AACTGTTTGGTAAACGATCAAGGAGTTGTGAAAGTA...CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGCTCTAGCCTTCCATGCGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTTCGAGTCATGTGCTaGGAATACCACTCATACATC | + |
|
Preference number: 5 (lower is better) Translates to: LEQYAREREKKGIPRCPGLRVMC*EYHSYI Trigger: GATGTATGAGTGGTATTCCAAGCACATGACTCGAAG...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCGCCCAGATGTCAGATTaGCTGCTGAACTTGCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSAQMSD*LLNLLY Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATCTGGGC...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCTTCTCAGCTCTTCAGTaGGGGAGAAAACATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSFSALQ*GRKHRE Trigger: CTCTCTATGTTTTCTCCCCAACTGAAGAGCTGAGAA...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGGCCTGCAGAGTTGTGTaGATGGTAGTTAATGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVACRVV*MVVNEL Trigger: GAGCTCATTAACTACCATCAACACAACTCTGCAGGC...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCAGTATGCCAGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGGTAGAAGGCGCGTTTTaGTTTTGTTTAGACACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LEQYAREREKKGIPRCPGVEGAF*FCLDTG Trigger: TCCTGTGTCTAAACAAAACAAAAACGCGCCTTCTAC...CCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCTGGCATACTGCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTGCCCAGATGTCAGATTaGCTGCTGAACTTGCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: QAVGQLVELFTVFPPPKCAQMSD*LLNLLY Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATCTGGGC...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS GCA 90 bp | AGAAACAGGCGCTTCTTGAAGTTTAAAGGTGATGTTTTCTTTTTCTaGTGGGAGCGCTTCAGAAAGATGCTCTCCAGTATCACTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNRRFLKFKGDVFFF*WERFRKMLSSITAA Trigger: GGCTGCAGTGATACTGGAGAGCATCTTTCTGAAGCGCTCCCAGCAGAAAAAGAAAACATCACCTTTAAACTTCAAGAAGCGCCTGTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCTCAGCTCTTCAGTaGGGGAGAAAACATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVFSALQ*GRKHRE Trigger: CTCTCTATGTTTTCTCCCCAACTGAAGAGCTGAGAA...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGACTCCAAGTATTCCATaGCTTCACAGACATCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGNMELGFVGERRRSTETPSIP*LHRHLC Trigger: GCAAAGATGTCTGTGAAGCAATGGAATACTTGGAGT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGATTTGCTGCTGAACTaGCTATACATAAGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GNERRKAFLDVQGSSCIQDLLLN*LYISTS Trigger: AGAAGTGCTTATGTATAGCAAGTTCAGCAGCAAATC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 90 bp | ATGAAACCTCCTTCTTTCCCCTCTTGCTTTAGCAGTTGCTCAGCTTaGCTTCGAGTCATGTGCTTGGAATACCACTCATACATCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: MKPPSFPSCFSSCSA*LRVMCLEYHSYISM Trigger: CATAGAGATGTATGAGTGGTATTCCAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGGAGGTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCAGAAACAGGCGCTTCTaGAAGTTTAAAGGTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSRNRRF*KFKGDV Trigger: AACATCACCTTTAAACTTCAAGAAGCGCCTGTTTCT...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | GGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCAGGCAATTGTAAGTCATTaGCGTTCATTGGCATGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GNERRKAFLDVQGSSCIQAIVSH*RSLACN Trigger: ATTACATGCCAATGAACGCAAATGACTTACAATTGC...CTGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTCCCATCCGATTTGCTGCTGAACTaGCTATACATAAGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WTTSGAIYSFPSPKVFPSDLLLN*LYISTS Trigger: AGAAGTGCTTATGTATAGCAAGTTCAGCAGCAAATC...GGATGGGAACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGAGAAACAGGCGCTTCTaGAAGTTTAAAGGTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVRNRRF*KFKGDV Trigger: AACATCACCTTTAAACTTCAAGAAGCGCCTGTTTCT...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTTGTACCAGGTCACTATaGTACCGGATTACATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QAVGQLVELFTVFPPPKCCTRSL*YRITFL Trigger: CAAAAATGTAATCCGGTACAATAGTGACCTGGTACA...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGTAGTCATTTGCGTTCATaGGCATGTAATCATAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAVGQLVELFTVFPPPKCSHLRS*ACNHKG Trigger: CCCTTTATGATTACATGCCAATGAACGCAAATGACT...ACACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGAAACATGGAATTAGGTTTTGTAGGAGAGAGGAGGAGATCCACGGAGAGGCGCGTTTTTGTTTaGTTTAGACACAGGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGNMELGFVGERRRSTERRVFV*FRHRIF Trigger: AAATATCCTGTGTCTAAACAAAACAAAAACGCGCCT...CTCCGTGGATCTCCTCCTCTCTCCTACAAAACCTAATTCCATGTTTCCTGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS-3UTR CAA 90 bp | AGGGAACGAGAGAAGAAAGGCATTCCTAGATGTCCAGGGCTCTTCATGCATTCATACTTTCACAACTCCTaGATCGTTTACCAAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: REREKKGIPRCPGLFMHSYFHNS*IVYQTV Trigger: AACTGTTTGGTAAACGATCAAGGAGTTGTGAAAGTA...TGAATGCATGAAGAGCCCTGGACATCTAGGAATGCCTTTCTTCTCTCGTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 90 bp | TTCATCATATACAACCTGGAATGGGTACGGGAACCTTTCAATGATTaGAATCTGTTCCATTTCACTAGACTCCTCACCTCTCCTCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIIYNLEWVREPFND*NLFHFTRLLTSPRN Trigger: ATTCCGAGGAGAGGTGAGGAGTCTAGTGAAATGGAACAGATTTCAATCATTGAAAGGTTCCCGTACCCATTCCAGGTTGTATATGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTGTTGGACAACTAGTGGAGCTATTTACAGTTTTCCCTCCCCCAAAGTGGCAATTGTAAGTCATTaGCGTTCATTGGCATGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TSCWTTSGAIYSFPSPKVAIVSH*RSLACN Trigger: ATTACATGCCAATGAACGCAAATGACTTACAATTGC...CACTTTGGGGGAGGGAAAACTGTAAATAGCTCCACTAGTTGTCCAACAGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 90 bp | TTTCTTACTGCCTCTTCTCCCACGTTCAAAGTCATATTCATAGTATaGAAGTTTGTGTACAGTCAAGAGAAACAGGCGCTTCTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLTASSPTFKVIFIV*KFVYSQEKQALLEV Trigger: AACTTCAAGAAGCGCCTGTTTCTCTTGACTGTACACAAACTTTCATACTATGAATATGACTTTGAACGTGGGAGAAGAGGCAGTAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CCA 72 bp | AATCATAAAGGGCCACGACCTTTTTCAGCTCGGTTGTaGAGATTGGTGCTGCTGTTGGCTCCGGGGGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NHKGPRPFSARL*RLVLLLAPGEA Trigger: CGCTTCCCCCGGAGCCAACAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGGTCGTGGCCCTTTATGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CAA 72 bp | AAAGGGCCACGACCTTTTTCAGCTCGGTTGTGGAGATaGGTGCTGCTGTTGGCTCCGGGGGAAGCGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KGPRPFSARLWR*VLLLAPGEAVF Trigger: AAAAACCGCTTCCCCCGGAGCCAACAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGGTCGTGGCCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS GCA 72 bp | ATTGCTTCACAGACATCTTTGCACATCTCAAGCAGCTaGTGTGTCTGGAAGCGGTGCCGCATCTCCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IASQTSLHISSS*CVWKRCRISLR Trigger: CCTGAGGGAGATGCGGCACCGCTTCCAGACACAGCAGCTGCTTGAGATGTGCAAAGATGTCTGTGAAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CCA 72 bp | GGTGTTTCTCAGCCAGGTAATACTGGCTCTGTGGCGTaGAACACACAACGTAATGGCGGATCACCCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSQPGNTGSVA*NTQRNGGSPLE Trigger: CTCAAGGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCTGAGAAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CCA 72 bp | GAAGAGGTGTTTCTCAGCCAGGTAATACTGGCTCTGTaGCGTGGAACACACAACGTAATGGCGGATCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: EEVFLSQVILAL*RGTHNVMADHP Trigger: GGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCTGAGAAACACCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CCA 72 bp | AGTTTCGAGCTGCCAGGTAATACTGGCTCTGTGGCGTaGAACACACAACGTAATGGCGGATCACCCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFELPGNTGSVA*NTQRNGGSPLE Trigger: CTCAAGGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCAGCTCGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113213.2 |
||
| CDS CCA 72 bp | CAAACAGTTTCGAGCTGCCAGGTAATACTGGCTCTGTaGCGTGGAACACACAACGTAATGGCGGATCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: QTVSSCQVILAL*RGTHNVMADHP Trigger: GGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACCTGGCAGCTCGAAACTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113213.2 |
||
| CDS CAA 72 bp | TGTAATCATAAAGGGCCACGACCTTTTTCAGCTCGGTaGTGGAGATTGGTGCTGCTGTTGGCTCCGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CNHKGPRPFSAR*WRLVLLLAPGE Trigger: TTCCCCCGGAGCCAACAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGGTCGTGGCCCTTTATGATTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CAA 72 bp | TTGGCCCCTCCACTTCCCATATTTCACGACACCGAATaGTCCAGTCCCAAGCTCCTTCAAGAAGGTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAPPLPIFHDTE*SSPKLLQEGEV Trigger: GACCTCACCTTCTTGAAGGAGCTTGGGACTGGACAATTCGGTGTCGTGAAATATGGGAAGTGGAGGGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CAA 90 bp | TCATTGGCATGTAATCATAAAGGGCCACGACCTTTTTCAGCTCGGTaGTGGAGATTGGTGCTGCTGTTGGCTCCGGGGGAAGCGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLACNHKGPRPFSAR*WRLVLLLAPGEAVF Trigger: AAAAACCGCTTCCCCCGGAGCCAACAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGGTCGTGGCCCTTTATGATTACATGCCAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 72 bp | CTTCAAGAAGGTGAGGTCCTTTGGATCAATTTCCCATaGTCCATAGCCCAGGCCTGCAGTAGAAGGCGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQEGEVLWINFP*SIAQACSRRRV Trigger: AACGCGCCTTCTACTGCAGGCCTGGGCTATGGATCATGGGAAATTGATCCAAAGGACCTCACCTTCTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS CCA 72 bp | GCTATACATAAGCACTTCTGGTGGAGACCACCGGACTaGAAACTTGGAGCCTACAGAGCTGGTGTACTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AIHKHFWWRPPD*KLGAYRAGVLI Trigger: GATGAGTACACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGTGGTCTCCACCAGAAGTGCTTATGTATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CAA 72 bp | TGCCCATTTTTATCTCGTGCTCGCCACCACGGTAGGTaGCTCTCCTCCAGGATAAAATACTCCTCGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CPFLSRARHHGR*LSSRIKYSSPF Trigger: AAAGGGCGAGGAGTATTTTATCCTGGAGGAGAGCAACCTACCGTGGTGGCGAGCACGAGATAAAAATGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CAA 90 bp | CTCCGACATGGAACCTTCTCTGATCATCTTGATGGCCACATCATATaGGCCCCTCCACTTCCCATATTTCACGACACCGAATTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRHGTFSDHLDGHII*APPLPIFHDTELSS Trigger: ACTGGACAATTCGGTGTCGTGAAATATGGGAAGTGGAGGGGCCAATATGATGTGGCCATCAAGATGATCAGAGAAGGTTCCATGTCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS TCA 72 bp | CACCGAATTGTCCAGTCCCAAGCTCCTTCAAGAAGGTaGGGTCCTTTGGATCAATTTCCCATGATCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: HRIVQSQAPSRR*GPLDQFPMIHS Trigger: GCTATGGATCATGGGAAATTGATCCAAAGGACCTCACCTTCTTGAAGGAGCTTGGGACTGGACAATTCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033617.13 |
||
| CDS TCA 72 bp | AGGTCACTATTGTACCGGATTACATTTTTGAGCTGGTaGATCCAGCGCTTTCTCAGCTCTTCAGTTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLLYRITFLSW*IQRFLSSSVGE Trigger: CTCCCCAACTGAAGAGCTGAGAAAGCGCTGGATTCACCAGCTCAAAAATGTAATCCGGTACAATAGTGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 72 bp | TCCAAAATTTGGCAGCCCATAGCATTCTTGGCTGTCTaGGAGCAGCAGAGATACTGTCCATCAATCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKIWQPIAFLAV*EQQRYCPSIQK Trigger: CTTCTGGATTGATGGACAGTATCTCTGCTGCTCTCAGACAGCCAAGAATGCTATGGGCTGCCAAATTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS TCA 72 bp | CCTTCTTTCCCCTCTTGCTTTAGCAGTTGCTCAGCTTaGCTTCGAGTCATGTGCTTGGAATACCACTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: PSFPSCFSSCSA*LRVMCLEYHSY Trigger: GTATGAGTGGTATTCCAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CCA 72 bp | CTCTATGGAGTCCTCAGCTTCAGTGATATAGTTACTTaGGATGTAGCCTTCCTGCCCATTTTTATCTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LYGVLSFSDIVT*DVAFLPIFISC Trigger: GCACGAGATAAAAATGGGCAGGAAGGCTACATCCCAAGTAACTATATCACTGAAGCTGAGGACTCCATAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
||
| CDS CCA 72 bp | TTAGCAGTTGCTCAGCTTGACTTCGAGTCATGTGCTTaGAATACCACTCATACATCTCTATGGAGTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAVAQLDFESCA*NTTHTSLWSPQ Trigger: CTGAGGACTCCATAGAGATGTATGAGTGGTATTCCAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS CAA 72 bp | CCTCGCCCTTTCGCAATTGTAAGTCATTTGCGTTCATaGGCATGTAATCATAAAGGGCCACGACCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PRPFAIVSHLRS*ACNHKGPRPFS Trigger: TGAAAAAGGTCGTGGCCCTTTATGATTACATGCCAATGAACGCAAATGACTTACAATTGCGAAAGGGCGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS TCA 72 bp | TACAACCTGGAATGGGTACGGGAACCTTTCAATGATTaGAATCTGTTCCATTTCACTAGACTCCTCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: YNLEWVREPFND*NLFHFTRLLTS Trigger: AGAGGTGAGGAGTCTAGTGAAATGGAACAGATTTCAATCATTGAAAGGTTCCCGTACCCATTCCAGGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS CAA 90 bp | CAGGATTCTTCATCCATCACATCTAGAATGTTACTCAAGAGAATTTaGAAACTAGGACGTTCATCTGCTTTCTCGTGCCAGCAGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QDSSSITSRMLLKRI*KLGRSSAFSCQQLY Trigger: GTACAGCTGCTGGCACGAGAAAGCAGATGAACGTCCTAGTTTCAAAATTCTCTTGAGTAACATTCTAGATGTGATGGATGAAGAATCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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| CDS TCA 72 bp | GCCTCTTCTCCCACGTTCAAAGTCATATTCATAGTATaGAAGTTTGTGTACAGTCAAGAGAAACAGGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: ASSPTFKVIFIV*KFVYSQEKQAL Trigger: AAGCGCCTGTTTCTCTTGACTGTACACAAACTTTCATACTATGAATATGACTTTGAACGTGGGAGAAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033617.13 ENSMUST00000113213.2 |
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