RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTG3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022863

Ensembl transcript IDs: ENSMUST00000023570.14, ENSMUST00000231353.2

Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCGCAGGTGTCCAACCAACGGTCCCGTCCCGGAGTCTCCCGTTCTaGAGGCACTCTGGTGCACTGAGGTGTTGGGAGAACCCTGATTCC +
Preference number: 1 (lower is better)
Translates to: SAGVQPTVPSRSLPF*RHSGALRCWENPDS
Trigger: GGAATCAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGGAGACTCCGGGACGGGACCGTTGGTTGGACACCTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 90 bp CGGTCCCGTCCCGGAGTCTCCCGTTCTGCAGGCACTCTGGTGCACTaGGGTGTTGGGAGAACCCTGATTCCTCCCTTCAGATCCTTCCAA +
Preference number: 1 (lower is better)
Translates to: RSRPGVSRSAGTLVH*GVGRTLIPPFRSFQ
Trigger: TTGGAAGGATCTGAAGGGAGGAATCAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGGAGACTCCGGGACGGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 90 bp CCCGTTCTGCAGGCACTCTGGTGCACTGAGGTGTTGGGAGAACCCTaGTTCCTCCCTTCAGATCCTTCCAAGCATTGCGTTCAGATGCAT +
Preference number: 1 (lower is better)
Translates to: PVLQALWCTEVLGEP*FLPSDPSKHCVQMH
Trigger: ATGCATCTGAACGCAATGCTTGGAAGGATCTGAAGGGAGGAATCAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 90 bp CTCATAGCCTGCTTCAGGTTACTCTGTGAGCTCTGTGAGAGTCTGTaGCGGCAAGGATGCTCACATGGGGACAGAACACTGTGTTTGCTC +
Preference number: 1 (lower is better)
Translates to: LIACFRLLCELCESL*RQGCSHGDRTLCLL
Trigger: GAGCAAACACAGTGTTCTGTCCCCATGTGAGCATCCTTGCCGTCACAGACTCTCACAGAGCTCACAGAGTAACCTGAAGCAGGCTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 90 bp TCTCAATGTATTAAGCAATGCGATGGCAAGGTTTTAGGCCAGAGTTaGGGTAGGTGGCAGGTAACGAGGTTAGCTGTGACTCTAAACCAT +
Preference number: 1 (lower is better)
Translates to: SQCIKQCDGKVLGQS*GRWQVTRLAVTLNH
Trigger: ATGGTTTAGAGTCACAGCTAACCTCGTTACCTGCCACCTACCCCAACTCTGGCCTAAAACCTTGCCATCGCATTGCTTAATACATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 90 bp AGCTCATTACCTGTCTTGTGTTTGATAAAGCCGCGTAAGCTGGTTTaGCAACATATCATTCCTTGTTCCCTTGTCCATCCTGAGCCCCAT +
Preference number: 1 (lower is better)
Translates to: SSLPVLCLIKPRKLV*QHIIPCSLVHPEPH
Trigger: ATGGGGCTCAGGATGGACAAGGGAACAAGGAATGATATGTTGTCAAACCAGCTTACGCGGCTTTATCAAACACAAGACAGGTAATGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 90 bp CTCACATGGGGACAGAACACTGTGTTTGCTCACGTTCCTAGTTCATaGAGAAGAGAAGACACTATACTTACCAATAAAACCATCACTTTA +
Preference number: 1 (lower is better)
Translates to: LTWGQNTVFAHVPSS*RREDTILTNKTITL
Trigger: TAAAGTGATGGTTTTATTGGTAAGTATAGTGTCTTCTCTTCTGCATGAACTAGGAACGTGAGCAAACACAGTGTTCTGTCCCCATGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR TCA 90 bp GGTAAGGACGGGAGCTTCTGGGAGCATCATCCCCCGGCCGCATCATCCCTGCTTGGCACTCTGGTGCACTaGGGTGTTGGGAGAACCCTG +
Preference number: 2 (lower is better)
Translates to: GKDGSFWEHHPPAASSLLGTLVH*GVGRTL
Trigger: CAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCC...AAGCAGGGATGATGCGGCCGGGGGATGATGCTCCCAGAAGCTCCCGTCCTTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 90 bp GAGCTTCTGGGAGCATCATCCCCCGGCCGCATCATCCCTGCTTTTTaGACATGTGCCTCTGGAATGGCAGTGCGTAGAGCCGAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: ELLGASSPGRIIPAF*TCASGMAVRRAELH
Trigger: ATGCAGCTCGGCTCTACGCACTGCCATTCCAGAGGCACATGTCAAAAAAGCAGGGATGATGCGGCCGGGGGATGATGCTCCCAGAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CCA 90 bp CCTACGCCATGGCTGGCAGGTGCTGCTCCTCTTAGGAACCAAAGTGGTTCCCTGCAGTCTGACCGCTTCTaGATGTGCTGTGTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: PTPWLAGAAPLRNQSGSLQSDRF*MCCVKP
Trigger: AGGCTTCACACAGCACATCCAGAAGCGGTCAGACTG...CAGGGAACCACTTTGGTTCCTAAGAGGAGCAGCACCTGCCAGCCATGGCGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR GCA 90 bp CCTACGCCATGGCTGGCAGGTGCTGCTCCTCTTAGGAACCAAAGTGGTTCCCTGTCTGGGACATACAGCTaGACGGTTCAAAACAGAGTG +
Preference number: 2 (lower is better)
Translates to: PTPWLAGAAPLRNQSGSLSGTYS*TVQNRV
Trigger: CACTCTGTTTTGAACCGTGCAGCTGTATGTCCCAGA...CAGGGAACCACTTTGGTTCCTAAGAGGAGCAGCACCTGCCAGCCATGGCGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR GCA 90 bp GGTAAGGACGGGAGCTTCTGGGAGCATCATCCCCCGGCCGCATCATCCCTGCTTCATCTGTCTTCTAACTaGATTGCCAACCTTACTGGT +
Preference number: 2 (lower is better)
Translates to: GKDGSFWEHHPPAASSLLHLSSN*IANLTG
Trigger: ACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATG...AAGCAGGGATGATGCGGCCGGGGGATGATGCTCCCAGAAGCTCCCGTCCTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR TCA 90 bp GTAACTGTAGGACCTGCAGGCTGGTTGTATGAATTCTGGACATGCGCGTCTGCCAAACAGAGTGGGCTCTaGCCAGTGTATGCTGCGACT +
Preference number: 2 (lower is better)
Translates to: VTVGPAGWLYEFWTCASAKQSGL*PVYAAT
Trigger: AGTCGCAGCATACACTGGTCAGAGCCCACTCTGTTT...GGCAGACGCGCATGTCCAGAATTCATACAACCAGCCTGCAGGTCCTACAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CCA 90 bp GCTGCATCTGAGATGCACCAACCTTTATGCAATGGCTGCTTGCCTGAGCTCATTGGTGCACTGAGGTGTTaGGAGAACCCTGATTCCTCC +
Preference number: 2 (lower is better)
Translates to: AASEMHQPLCNGCLPELIGALRC*ENPDSS
Trigger: GGAGGAATCAGGGTTCTCCCAACACCTCAGTGCACC...AATGAGCTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR GCA 90 bp ATGGCAGTGCGTAGAGCCGAGCTGCATCTGAGATGCACCAACCTTTATGCAATGCTCTGGCAGTTTGTCTaGACCCAGCATCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: MAVRRAELHLRCTNLYAMLWQFV*TQHHLS
Trigger: AGACAGATGATGCTGGGTGCAGACAAACTGCCAGAG...CATTGCATAAAGGTTGGTGCATCTCAGATGCAGCTCGGCTCTACGCACTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR TCA 90 bp GCTGCATCTGAGATGCACCAACCTTTATGCAATGGCTGCTTGCCTGAGCTCATTCACCAGTTATATCTGTaGAGAACGCCAGTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: AASEMHQPLCNGCLPELIHQLYL*RTPVLS
Trigger: ACTCAGAACTGGCGTTCTTCACAGATATAACTGGTG...AATGAGCTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR GCA 90 bp TGGTTTGACAACATATCATTCCTTGTTCCCTTGTCCATCCTGAGCCCCATACTGCCTGTGTGGTGTGTTTaGTTACTCCTGCTAATTCTG +
Preference number: 2 (lower is better)
Translates to: WFDNISFLVPLSILSPILPVWCV*LLLLIL
Trigger: CAGAATTAGCAGGAGTAAGCAAACACACCACACAGG...CAGTATGGGGCTCAGGATGGACAAGGGAACAAGGAATGATATGTTGTCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR TCA 90 bp TGGTTTGACAACATATCATTCCTTGTTCCCTTGTCCATCCTGAGCCCCATACTGTTTCTTCTCCTGTTTTaGGAGCCACAGCAAAATGCT +
Preference number: 2 (lower is better)
Translates to: WFDNISFLVPLSILSPILFLLLF*EPQQNA
Trigger: AGCATTTTGCTGTGGCTCTCAAAACAGGAGAAGAAA...CAGTATGGGGCTCAGGATGGACAAGGGAACAAGGAATGATATGTTGTCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CCA 90 bp GCAATACATCCTATCACTACAGATTTGCCCTCCCCCACCCTTTTCTTTCATAGACTTAGACAAAGGCCTTaGGGATCTCTTTTGAAAGTT +
Preference number: 2 (lower is better)
Translates to: AIHPITTDLPSPTLFFHRLRQRP*GSLLKV
Trigger: AACTTTCAAAAGAGATCCCCAAGGCCTTTGTCTAAG...TCTATGAAAGAAAAGGGTGGGGGAGGGCAAATCTGTAGTGATAGGATGTATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CCA 90 bp CATCTGTCTTCTAACTGCATTGCCAACCTTACTGGTTCATTAGCTTTATTAAAAGCAAGGATGCTCACATaGGGACAGAACACTGTGTTT +
Preference number: 2 (lower is better)
Translates to: HLSSNCIANLTGSLALLKARMLT*GQNTVF
Trigger: AAACACAGTGTTCTGTCCCCATGTGAGCATCCTTGC...TTTTAATAAAGCTAATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR GCA 90 bp CATCTGTCTTCTAACTGCATTGCCAACCTTACTGGTTCATTAGCTTTATTAAAATTTTTATGTTTTCTTTaGTTAGACAAAGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: HLSSNCIANLTGSLALLKFLCFL*LDKGLG
Trigger: CCCAAGGCCTTTGTCTAAGCAAAGAAAACATAAAAA...TTTTAATAAAGCTAATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp GTCCAACCAACGGTCCCGTCCCGGAGTCTCCCGTTCTaGAGGCACTCTGGTGCACTGAGGTGTTGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: VQPTVPSRSLPF*RHSGALRCWEN
Trigger: GTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGGAGACTCCGGGACGGGACCGTTGGTTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 72 bp CCCGGAGTCTCCCGTTCTGCAGGCACTCTGGTGCACTaGGGTGTTGGGAGAACCCTGATTCCTCCCTTCAGA +
Preference number: 3 (lower is better)
Translates to: PGVSRSAGTLVH*GVGRTLIPPFR
Trigger: TCTGAAGGGAGGAATCAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGGAGACTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp TCTCAAGGACAGAGACTAGGTAAGGACGGGAGCTTCTaGGAGCATCATCCCCCGGCCGCATCATCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: SQGQRLGKDGSF*EHHPPAASSLL
Trigger: AAGCAGGGATGATGCGGCCGGGGGATGATGCTCCCAGAAGCTCCCGTCCTTACCTAGTCTCTGTCCTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp CTCCCGTTCTGCAGGCACTCTGGTGCACTGAGGTGTTaGGAGAACCCTGATTCCTCCCTTCAGATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LPFCRHSGALRC*ENPDSSLQILP
Trigger: TGGAAGGATCTGAAGGGAGGAATCAGGGTTCTCCCAACACCTCAGTGCACCAGAGTGCCTGCAGAACGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp CAGAAACTGTCGGACTCCCAGACAATGCCTACGCCATaGCTGGCAGGTGCTGCTCCTCTTAGGAACCAAAGT +
Preference number: 3 (lower is better)
Translates to: QKLSDSQTMPTP*LAGAAPLRNQS
Trigger: ACTTTGGTTCCTAAGAGGAGCAGCACCTGCCAGCCATGGCGTAGGCATTGTCTGGGAGTCCGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp AGTTTGAATGGCAGAAACTGTCGGACTCCCAGACAATaGCTACGCCATGGCTGGCAGGTGCTGCTCCTCTTA +
Preference number: 3 (lower is better)
Translates to: SLNGRNCRTPRQ*LRHGWQVLLLL
Trigger: TAAGAGGAGCAGCACCTGCCAGCCATGGCGTAGGCATTGTCTGGGAGTCCGACAGTTTCTGCCATTCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CAA 90 bp GTAACTGTAGGACCTGCAGGCTGGTTGTATGAATTCTGGACATGCGCGTCTGCCCCTATCACTACAGATTaGCCCTCCCCCACCCTTTTC +
Preference number: 3 (lower is better)
Translates to: VTVGPAGWLYEFWTCASAPITTD*PSPTLF
Trigger: GAAAAGGGTGGGGGAGGGCAAATCTGTAGTGATAGG...GGCAGACGCGCATGTCCAGAATTCATACAACCAGCCTGCAGGTCCTACAGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 72 bp TGCTTCAGGTTACTCTGTGAGCTCTGTGAGAGTCTGTaGCGGCAAGGATGCTCACATGGGGACAGAACACTG +
Preference number: 3 (lower is better)
Translates to: CFRLLCELCESL*RQGCSHGDRTL
Trigger: CAGTGTTCTGTCCCCATGTGAGCATCCTTGCCGTCACAGACTCTCACAGAGCTCACAGAGTAACCTGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp ATTCTGGACATGCGCGTCTGCCTCTGGCAGTTTGTCTaGACCCAGCATCATCTGTCTTCTAACTGCATTGCC +
Preference number: 3 (lower is better)
Translates to: ILDMRVCLWQFV*TQHHLSSNCIA
Trigger: GGCAATGCAGTTAGAAGACAGATGATGCTGGGTGCAGACAAACTGCCAGAGGCAGACGCGCATGTCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CAA 90 bp AGCCGAGCTGCATCTGAGATGCACCAACCTTTATGCAATGGCTGCTTGCCTGAGGACAGAACACTGTGTTaGCTCACGTTCCTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: SRAASEMHQPLCNGCLPEDRTLC*LTFLVH
Trigger: ATGAACTAGGAACGTGAGCAAACACAGTGTTCTGTC...CTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGCAGCTCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp ATTAAGCAATGCGATGGCAAGGTTTTAGGCCAGAGTTaGGGTAGGTGGCAGGTAACGAGGTTAGCTGTGACT +
Preference number: 3 (lower is better)
Translates to: IKQCDGKVLGQS*GRWQVTRLAVT
Trigger: AGTCACAGCTAACCTCGTTACCTGCCACCTACCCCAACTCTGGCCTAAAACCTTGCCATCGCATTGCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR-3UTR CAA 90 bp GTAACTGTAGGACCTGCAGGCTGGTTGTATGAATTCTGGACATGCGCGTCTGCCTGTCTTCTAACTGCATaGCCAACCTTACTGGTTCAT +
Preference number: 3 (lower is better)
Translates to: VTVGPAGWLYEFWTCASACLLTA*PTLLVH
Trigger: ATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACA...GGCAGACGCGCATGTCCAGAATTCATACAACCAGCCTGCAGGTCCTACAGTTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp AAGCATTGCGTTCAGATGCATCAGTCTGACCGCTTCTaGATGTGCTGTGTGAAGCCTTCACGTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: KHCVQMHQSDRF*MCCVKPSRFLL
Trigger: GAGAAGAAAACGTGAAGGCTTCACACAGCACATCCAGAAGCGGTCAGACTGATGCATCTGAACGCAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 72 bp CTCTTAGGAACCAAAGTGGTTCCCTGTGTCCTTGATTaGGATTTCAACCCAGCGGTGTTTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LLGTKVVPCVLD*DFNPAVFVCVC
Trigger: ACACACACACACAAACACCGCTGGGTTGAAATCTCAATCAAGGACACAGGGAACCACTTTGGTTCCTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp GCTGCATCTGAGATGCACCAACCTTTATGCAATGGCTaGTTGCCTGAGCTCATTACCTGTCTTGTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: AASEMHQPLCNG*LPELITCLVFD
Trigger: ATCAAACACAAGACAGGTAATGAGCTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp AGGTTAGCTGTGACTCTAAACCATGGCTCAGAGGTCTaGAAGATAATCTCCCCCTTACCTTTTATGACTCTG +
Preference number: 3 (lower is better)
Translates to: RLAVTLNHGSEV*KIISPLPFMTL
Trigger: CAGAGTCATAAAAGGTAAGGGGGAGATTATCTTCCAGACCTCTGAGCCATGGTTTAGAGTCACAGCTAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp CATCTGAGATGCACCAACCTTTATGCAATGGCTGCTTaGCTGAGCTCATTACCTGTCTTGTGTTTGATAAAG +
Preference number: 3 (lower is better)
Translates to: HLRCTNLYAMAA*LSSLPVLCLIK
Trigger: CTTTATCAAACACAAGACAGGTAATGAGCTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CCA 72 bp CACACACACACCATACTTTCAGTACTAAGCCCTGTGTaGTGTGTTTGCTTACTCCTGCTAATTCTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: HTHTILSVLSPV*CVCLLLLILLQ
Trigger: TTGCAACAGAATTAGCAGGAGTAAGCAAACACACCACACAGGGCTTAGTACTGAAAGTATGGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp AAGTCACGTAAATTCATAATGTTAAATGGTCTTTGCTaGACTAAGCGGGTCGTCCCGGTGATCAGTGTCATT +
Preference number: 3 (lower is better)
Translates to: KSRKFIMLNGLC*TKRVVPVISVI
Trigger: AATGACACTGATCACCGGGACGACCCGCTTAGTGCAGCAAAGACCATTTAACATTATGAATTTACGTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR GCA 72 bp CAGTTTGTCTGCACCCAGCATCATCTGTCTTCTAACTaGATTGCCAACCTTACTGGTTCATTAGCTTTATTA +
Preference number: 3 (lower is better)
Translates to: QFVCTQHHLSSN*IANLTGSLALL
Trigger: TAATAAAGCTAATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATGATGCTGGGTGCAGACAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR TCA 72 bp TGCCAACCTTACTGGTTCATTAGCTTTATTAAAAGCTaGCCGCAATACATCCTATCACTACAGATTTGCCCT +
Preference number: 3 (lower is better)
Translates to: CQPYWFISFIKS*PQYILSLQICP
Trigger: AGGGCAAATCTGTAGTGATAGGATGTATTGCGGTCAGCTTTTAATAAAGCTAATGAACCAGTAAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR CCA 90 bp GGTAAGGACGGGAGCTTCTGGGAGCATCATCCCCCGGCCGCATCATCCCTGCTTCACCTGCTGTTAACCTaGTACACGGGGCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GKDGSFWEHHPPAASSLLHLLLT*YTGLGV
Trigger: AACACCAAGCCCCGTGTACCAGGTTAACAGCAGGTG...AAGCAGGGATGATGCGGCCGGGGGATGATGCTCCCAGAAGCTCCCGTCCTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp GGAGCATCATCCCCCGGCCGCATCATCCCTGCTTTTTaGACATGTGCCTCTGGAATGGCAGTGCGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GASSPGRIIPAF*TCASGMAVRRA
Trigger: GGCTCTACGCACTGCCATTCCAGAGGCACATGTCAAAAAAGCAGGGATGATGCGGCCGGGGGATGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp CCTGTGTGGTGTGTTTGCTTACTCCTGCTAATTCTGTaGCAATCTCACGCTAGCCTCCAACCGAGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: PVWCVCLLLLIL*QSHASLQPSRN
Trigger: GTTCCGGCTCGGTTGGAGGCTAGCGTGAGATTGCAACAGAATTAGCAGGAGTAAGCAAACACACCACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp AATGTGAACCCAAGGAAGGCTCCCTTCCACTACAGTTaGAATGGCAGAAACTGTCGGACTCCCAGACAATGC +
Preference number: 4 (lower is better)
Translates to: NVNPRKAPFHYS*NGRNCRTPRQC
Trigger: GCATTGTCTGGGAGTCCGACAGTTTCTGCCATTCAAACTGTAGTGGAAGGGAGCCTTCCTTGGGTTCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR CCA 90 bp TCTGTGAGAGTCTGTGACGGCAAGGATGCTCACATGGGGACAGAACACTGTGTTTGTAGGCCTGACCTTTaGATGGTTTTTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: SVRVCDGKDAHMGTEHCVCRPDL*MVFLDT
Trigger: GGTATCCAGAAAAACCATCCAAAGGTCAGGCCTACA...AACACAGTGTTCTGTCCCCATGTGAGCATCCTTGCCGTCACAGACTCTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp GTAAGCTGGTTTGACAACATATCATTCCTTGTTCCCTaGTCCATCCTGAGCCCCATACTGGCTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: VSWFDNISFLVP*SILSPILADEG
Trigger: CCCTTCATCAGCCAGTATGGGGCTCAGGATGGACAAGGGAACAAGGAATGATATGTTGTCAAACCAGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp GCATCTGAGATGCACCAACCTTTATGCAATGGCTGCTaGCCTGAGCTCATTACCTGTCTTGTGTTTGATAAA +
Preference number: 4 (lower is better)
Translates to: ASEMHQPLCNGC*PELITCLVFDK
Trigger: TTTATCAAACACAAGACAGGTAATGAGCTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR GCA 90 bp CATCTGTCTTCTAACTGCATTGCCAACCTTACTGGTTCATTAGCTTTATTAAAATCACGTCCACTTCCTTaGTTGTGTCTTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: HLSSNCIANLTGSLALLKSRPLP*LCLHLR
Trigger: CCTCAGATGAAGACACAAGCAAGGAAGTGGACGTGA...TTTTAATAAAGCTAATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
3UTR CAA 72 bp ATCAATCCATTAGAAAGACAAGTCCCGTTCGTTCCCTaGGATAAAGTTGTAATTTCTTTTCCCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: INPLERQVPFVP*DKVVISFPFSQ
Trigger: CTGAGAGAAGGGAAAAGAAATTACAACTTTATCCAAGGGAACGAACGGGACTTGTCTTTCTAATGGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS GCA 90 bp GGCTTGGTGTTGCCGCCACTGAGCTGGGTTTCACGTCCACTTCCTTaGTTGTGTCTTCATCTGAGGAAGAGGACCCTGAGTGATAATCAG +
Preference number: 5 (lower is better)
Translates to: GLVLPPLSWVSRPLP*LCLHLRKRTLSDNQ
Trigger: CTGATTATCACTCAGGGTCCTCTTCCTCAGATGAAGACACAAGCAAGGAAGTGGACGTGAAACCCAGCTCAGTGGCGGCAACACCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023570.14
ENSMUST00000231353.2
CDS-3UTR CAA 90 bp CCTACGCCATGGCTGGCAGGTGCTGCTCCTCTTAGGAACCAAAGTGGTTCCCTGGCAACAATGAACGCATaGTTTTTCTCTCCATACCGG +
Preference number: 5 (lower is better)
Translates to: PTPWLAGAAPLRNQSGSLATMNA*FFSPYR
Trigger: CCGGTATGGAGAGAAAAACAATGCGTTCATTGTTGC...CAGGGAACCACTTTGGTTCCTAAGAGGAGCAGCACCTGCCAGCCATGGCGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR CAA 90 bp AGCCGAGCTGCATCTGAGATGCACCAACCTTTATGCAATGGCTGCTTGCCTGAGGCCCTGCTAACTTTCTaGGAGATTTCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SRAASEMHQPLCNGCLPEALLTF*EISSLF
Trigger: GAACAAGGATGAAATCTCCAAGAAAGTTAGCAGGGC...CTCAGGCAAGCAGCCATTGCATAAAGGTTGGTGCATCTCAGATGCAGCTCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR CAA 90 bp ATCATGATATCAGGTAATTCAGTGAAACTAGACTCCGCAGGTGTCCAACCAACGTTGGAGATTTCATCCTaGTTCTCGTCCTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: IMISGNSVKLDSAGVQPTLEISS*FSSSFS
Trigger: TGAAAATGAGGACGAGAACAAGGATGAAATCTCCAA...CGTTGGTTGGACACCTGCGGAGTCTAGTTTCACTGAATTACCTGATATCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS-3UTR CAA 90 bp CATCTGTCTTCTAACTGCATTGCCAACCTTACTGGTTCATTAGCTTTATTAAAATTCACGTCCACTTCCTaGCTTGTGTCTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: HLSSNCIANLTGSLALLKFTSTS*LVSSSE
Trigger: CTCAGATGAAGACACAAGCAAGGAAGTGGACGTGAA...TTTTAATAAAGCTAATGAACCAGTAAGGTTGGCAATGCAGTTAGAAGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS TCA 72 bp GTTAACCTGGTACACGGGGCTTGGTGTTGCCGCCACTaGGCTGGGTTTCACGTCCACTTCCTTGCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: VNLVHGAWCCRH*AGFHVHFLACV
Trigger: GACACAAGCAAGGAAGTGGACGTGAAACCCAGCTCAGTGGCGGCAACACCAAGCCCCGTGTACCAGGTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231353.2
CDS CAA 72 bp ATATCAGTTCTGAAATCTGGTACACGGGGCTTGGTGTaGCCGCCACTGAGCTGGGTTTCACGTCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: ISVLKSGTRGLV*PPLSWVSRPLP
Trigger: AGGAAGTGGACGTGAAACCCAGCTCAGTGGCGGCAACACCAAGCCCCGTGTACCAGATTTCAGAACTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023570.14
CDS CAA 72 bp TCAGAGGTCACCTTATCCAGAGCCCTGCTAACTTTCTaGGAGATTTCATCCTTGTTCTCGTCCTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: SEVTLSRALLTF*EISSLFSSSFS
Trigger: TGAAAATGAGGACGAGAACAAGGATGAAATCTCCAAGAAAGTTAGCAGGGCTCTGGATAAGGTGACCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023570.14
ENSMUST00000231353.2