RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTG2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020423

Ensembl transcript IDs: ENSMUST00000020692.7

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGGCAGCCCTACAAGAATACCAGGTAGTCCTGCAGTGCACAGGTaGCCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCC +
Preference number: 1 (lower is better)
Translates to: HGSPTRIPGSPAVHR*PPCGPGRSPQGPPA
Trigger: GGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAGGGCACCTGTGCACTGCAGGACTACCTGGTATTCTTGTAGGGCTGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR TCA 90 bp GGGCTGGGAGGTCCGGTCTCAGAGCATCCTGGGACTATTGCACAGTaGCTGAGAACGCTTGTCCTAGGAAATAGGGCCCTCCAGGACCCA +
Preference number: 1 (lower is better)
Translates to: GLGGPVSEHPGTIAQ*LRTLVLGNRALQDP
Trigger: TGGGTCCTGGAGGGCCCTATTTCCTAGGACAAGCGTTCTCAGTCACTGTGCAATAGTCCCAGGATGCTCTGAGACCGGACCTCCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR TCA 90 bp AGGCATACAGGCATCCCAGCTGGGACGGTAACCCAGAGCAGACCCTaGCCCCTCTCATTCACAGTTGCTAACCTTGCTCCCTTCCACCAC +
Preference number: 1 (lower is better)
Translates to: RHTGIPAGTVTQSRP*PLSFTVANLAPFHH
Trigger: GTGGTGGAAGGGAGCAAGGTTAGCAACTGTGAATGAGAGGGGTCAGGGTCTGCTCTGGGTTACCGTCCCAGCTGGGATGCCTGTATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 90 bp GAGTTAAGGTTAAAGCAAGAGAGACGAAGCCACCTGGGAAGGCTGTaGGAAGCTGGGGCCTGTCTGCCCGGGCAGGCAGAGAGTTTGGTA +
Preference number: 1 (lower is better)
Translates to: ELRLKQERRSHLGRL*EAGACLPGQAESLV
Trigger: TACCAAACTCTCTGCCTGCCCGGGCAGACAGGCCCCAGCTTCGCACAGCCTTCCCAGGTGGCTTCGTCTCTCTTGCTTTAACCTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 90 bp GTAACCTCCCCCACAGGTGCTCTGAGCACCAAGGAGCTAAAGCTGTaGCCAAGGTTTGACTCTTCATGGCAGCCCTACAAGAATACCAGG +
Preference number: 1 (lower is better)
Translates to: VTSPTGALSTKELKL*PRFDSSWQPYKNTR
Trigger: CCTGGTATTCTTGTAGGGCTGCCATGAAGAGTCAAACCTTGGGCACAGCTTTAGCTCCTTGGTGCTCAGAGCACCTGTGGGGGAGGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR TCA 90 bp CACAGGTGCTCTGAGCACCAAGGAGCTAAAGCTGTGCCCAAGGTTTaGCTCTTCATGGCAGCCCTACAAGAATACCAGGTAGTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: HRCSEHQGAKAVPKV*LFMAALQEYQVVLQ
Trigger: CTGCAGGACTACCTGGTATTCTTGTAGGGCTGCCATGAAGAGTCAAACCTTGGGCACAGCTTTAGCTCCTTGGTGCTCAGAGCACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CCA 90 bp TCTAAACGGCAGGCACCTGTGTGCGGACAAAACACAAGAACCATCTaGAACAATTCACAGCTTTGTTGTAGGCCACAGCTCTCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: SKRQAPVCGQNTRTI*NNSQLCCRPQLSGL
Trigger: CAGACCTGAGAGCTGTGGCCTACAACAAAGCTGTGAATTGTTCCAGATGGTTCTTGTGTTTTGTCCGCACACAGGTGCCTGCCGTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CCA 90 bp ACTGGCTCACAGATGCAATCAAGAACAGTTCTCTCCAAAGGCACCTaGGGAGGCCACTTCCAAGCAGCTCCCTTTAAAGAATTGTTTTTC +
Preference number: 1 (lower is better)
Translates to: TGSQMQSRTVLSKGT*GGHFQAAPFKELFF
Trigger: GAAAAACAATTCTTTAAAGGGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGATTGCATCTGTGAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 90 bp AAAGACCTACCCCCATTGGATACTCTTTGGGTCCCAAAATTCCATTaGAAATCATCCCTAAATTATTCACTATCCACCCATACAAAGCAG +
Preference number: 1 (lower is better)
Translates to: KDLPPLDTLWVPKFH*KSSLNYSLSTHTKQ
Trigger: CTGCTTTGTATGGGTGGATAGTGAATAATTTAGGGATGATTTGCAATGGAATTTTGGGACCCAAAGAGTATCCAATGGGGGTAGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp CCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCCAGTCAGAACCCCAGGCTTGAATGCCCCTaGGTAAGAGAGGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: PPCGPGRSPQGPPASQNPRLECP*VREGPG
Trigger: GCCTGGTCCCTCTCTTACTCAGGGGCATTCAAGCCT...GGGGTTCTGACTGGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp CCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCCAGTCAGAACCCCACCCAGAGCAGACCCTaGCCCCTCTCATTCACAGTT +
Preference number: 2 (lower is better)
Translates to: PPCGPGRSPQGPPASQNPTQSRP*PLSFTV
Trigger: AACTGTGAATGAGAGGGGTCAGGGTCTGCTCTGGGT...GGGGTTCTGACTGGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CCA 90 bp TTCATGGCAGCCCTACAAGAATACCAGGTAGTCCTGCAGTGCACAGGTGCCCTCGGCATCAGGAGGGGCTaGGAGGTCCGGTCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: FMAALQEYQVVLQCTGALGIRRG*EVRSQS
Trigger: GCTCTGAGACCGGACCTCCCAGCCCCTCCTGATGCC...GAGGGCACCTGTGCACTGCAGGACTACCTGGTATTCTTGTAGGGCTGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp TGGGAAGGCTGTGCGAAGCTGGGGCCTGTCTGCCCGGGCAGGCAGAGAGTTTGGCCTTTGAGCAGAAACTaGGGAGCTGAGAAATCTAGG +
Preference number: 2 (lower is better)
Translates to: WEGCAKLGPVCPGRQRVWPLSRN*GAEKSR
Trigger: CCTAGATTTCTCAGCTCCTCAGTTTCTGCTCAAAGG...CCAAACTCTCTGCCTGCCCGGGCAGACAGGCCCCAGCTTCGCACAGCCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CCA 90 bp GAGAGGGACCAGGCATACAGGCATCCCAGCTGGGACGGTAACCCAGAGCAGACCCCCCTAGGCAAACACTaGCTCACAGATGCAATCAAG +
Preference number: 2 (lower is better)
Translates to: ERDQAYRHPSWDGNPEQTPLGKH*LTDAIK
Trigger: CTTGATTGCATCTGTGAGCCAGTGTTTGCCTAGGGG...GGTCTGCTCTGGGTTACCGTCCCAGCTGGGATGCCTGTATGCCTGGTCCCTCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp GGGGCTGGGAGGTCCGGTCTCAGAGCATCCTGGGACTATTGCACAGTGACTGAGAGTTCCCTGGAGCTTTaGGCCACCTCTCAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GAGRSGLRASWDYCTVTESSLEL*ATSQRN
Trigger: ATTCCTTTGAGAGGTGGCTCAAAGCTCCAGGGAACT...CTCAGTCACTGTGCAATAGTCCCAGGATGCTCTGAGACCGGACCTCCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR GCA 90 bp GCAGAAACTGAGGAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTGGAGACAGGTAGTCCTGCAGTaGACAGGTGCCCTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: AETEELRNLGHRMPWRWRQVVLQ*TGALPV
Trigger: CACAGGGAGGGCACCTGTGCACTGCAGGACTACCTG...TCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTCCTCAGTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp TCAAGAACAGTTCTCTCCAAAGGCACCTGGGGAGGCCACTTCCAAGCAGCTCCCTACAGTTCCCCAGGTTaGGGTATACGGTGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: SRTVLSKGTWGGHFQAAPYSSPG*GIRWPV
Trigger: AACAGGCCACCGTATACCTCAACCTGGGGAACTGTA...GGGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR GCA 90 bp ATGCAATCAAGAACAGTTCTCTCCAAAGGCACCTGGGGAGGCCACTTCCAAGCAATGAGAACAGTAGAGTaGCAGGGTCGGGTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: MQSRTVLSKGTWGGHFQAMRTVE*QGRVAP
Trigger: AGGAGCCACCCGACCCTGGCACTCTACTGTTCTCAT...TGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CCA 90 bp TGGAGCTTTGAGCCACCTCTCAAAGGAATAGTGGTAGCAGCATTCAGACTGTCGCCTTCCACCACCTCCTaGGGGGATCAGCCAAGAATC +
Preference number: 2 (lower is better)
Translates to: WSFEPPLKGIVVAAFRLSPSTTS*GDQPRI
Trigger: GATTCTTGGCTGATCCCCCCAGGAGGTGGTGGAAGG...CGACAGTCTGAATGCTGCTACCACTATTCCTTTGAGAGGTGGCTCAAAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CCA 90 bp TCCGGTCTCAGAGCATCCTGGGACTATTGCACAGTGACTGAGAACGCTTGTCCTCCATTGGATACTCTTTaGGTCCCAAAATTCCATTGC +
Preference number: 2 (lower is better)
Translates to: SGLRASWDYCTVTENACPPLDTL*VPKFHC
Trigger: GCAATGGAATTTTGGGACCCAAAGAGTATCCAATGG...AGGACAAGCGTTCTCAGTCACTGTGCAATAGTCCCAGGATGCTCTGAGACCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp TGTGCGGACAAAACACAAGAACCATCTGGAACAATTCACAGCTTTGTTGTAGGCGGGACTATTGCACAGTaGCTGAGAACGCTTGTCCTA +
Preference number: 2 (lower is better)
Translates to: CADKTQEPSGTIHSFVVGGTIAQ*LRTLVL
Trigger: TAGGACAAGCGTTCTCAGTCACTGTGCAATAGTCCC...GCCTACAACAAAGCTGTGAATTGTTCCAGATGGTTCTTGTGTTTTGTCCGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR TCA 90 bp TGTGCGGACAAAACACAAGAACCATCTGGAACAATTCACAGCTTTGTTGTAGGCGGGGAAGGTTGCTCTTaGAGAGAAGGCAGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: CADKTQEPSGTIHSFVVGGEGCS*REGSKK
Trigger: TTTCTTACTGCCTTCTCTTCAAGAGCAACCTTCCCC...GCCTACAACAAAGCTGTGAATTGTTCCAGATGGTTCTTGTGTTTTGTCCGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR GCA 90 bp AAAGGACTTGGAGTTCCCTGGAGCTTTGAGCCACCTCTCAAAGGAATAGTGGTAACACTGGCTCACAGATaGAATCAAGAACAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: KGLGVPWSFEPPLKGIVVTLAHR*NQEQFS
Trigger: AGAGAACTGTTCTTGATTGCATCTGTGAGCCAGTGT...TACCACTATTCCTTTGAGAGGTGGCTCAAAGCTCCAGGGAACTCCAAGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CAA 90 bp TCTCCAACCCAGAACAGTAAATATTGCACACATCTACAAATAAATTaGGATTTTACTAAGAGAGAGAGAGAGGTAACCTCCCCCACAGGT +
Preference number: 2 (lower is better)
Translates to: SPTQNSKYCTHLQIN*DFTKREREVTSPTG
Trigger: ACCTGTGGGGGAGGTTACCTCTCTCTCTCTCTTAGTAAAATCCAAATTTATTTGTAGATGTGTGCAATATTTACTGTTCTGGGTTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp TGGGAAGGCTGTGCGAAGCTGGGGCCTGTCTGCCCGGGCAGGCAGAGAGTTTGGGTATACGGTGGCCTGTaGTCAGGGCAGCATGAGAAC +
Preference number: 3 (lower is better)
Translates to: WEGCAKLGPVCPGRQRVWVYGGL*SGQHEN
Trigger: GTTCTCATGCTGCCCTGACAACAGGCCACCGTATAC...CCAAACTCTCTGCCTGCCCGGGCAGACAGGCCCCAGCTTCGCACAGCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp CCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCCAGTCAGAACCCCTCACAGTTGCTAACCTaGCTCCCTTCCACCACCTCC +
Preference number: 3 (lower is better)
Translates to: PPCGPGRSPQGPPASQNPSQLLT*LPSTTS
Trigger: GGAGGTGGTGGAAGGGAGCAAGGTTAGCAACTGTGA...GGGGTTCTGACTGGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR TCA 72 bp GGCATCCCAGCTGGGACGGTAACCCAGAGCAGACCCTaGCCCCTCTCATTCACAGTTGCTAACCTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: GIPAGTVTQSRP*PLSFTVANLAP
Trigger: GGGAGCAAGGTTAGCAACTGTGAATGAGAGGGGTCAGGGTCTGCTCTGGGTTACCGTCCCAGCTGGGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 72 bp CCTACAAGAATACCAGGTAGTCCTGCAGTGCACAGGTaGCCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGC +
Preference number: 3 (lower is better)
Translates to: PTRIPGSPAVHR*PPCGPGRSPQG
Trigger: GCCTTGCGGAGATCTTCCTGGGCCACAGGGAGGGCACCTGTGCACTGCAGGACTACCTGGTATTCTTGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp TGGGAAGGCTGTGCGAAGCTGGGGCCTGTCTGCCCGGGCAGGCAGAGAGTTTGGAGCAAAGCAAAGGTTTaGTGCAGGTCCTCTCCATCT +
Preference number: 3 (lower is better)
Translates to: WEGCAKLGPVCPGRQRVWSKAKV*CRSSPS
Trigger: AGATGGAGAGGACCTGCACAAAACCTTTGCTTTGCT...CCAAACTCTCTGCCTGCCCGGGCAGACAGGCCCCAGCTTCGCACAGCCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp CCTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCCAGTCAGAACCCCCCCATTGGATACTCTTaGGGTCCCAAAATTCCATTG +
Preference number: 3 (lower is better)
Translates to: PPCGPGRSPQGPPASQNPPIGYS*GPKIPL
Trigger: CAATGGAATTTTGGGACCCAAAGAGTATCCAATGGG...GGGGTTCTGACTGGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CCA 72 bp GAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTaGAGAGAAACGGGGAAGGGAATCCTCACCAAGGGG +
Preference number: 3 (lower is better)
Translates to: ELRNLGHRMPWR*RETGKGILTKG
Trigger: CCCCTTGGTGAGGATTCCCTTCCCCGTTTCTCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR TCA 72 bp TGGAGAGAAACGGGGAAGGGAATCCTCACCAAGGGGTaGCGGGCTAGCTCTAGCTCTGTCCTTCAGTTTGAG +
Preference number: 3 (lower is better)
Translates to: WRETGKGILTKG*RASSSSVLQFE
Trigger: CTCAAACTGAAGGACAGAGCTAGAGCTAGCCCGTCACCCCTTGGTGAGGATTCCCTTCCCCGTTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CCA 72 bp GCAAGGCCCACCAGCCAGTCAGAACCCCTAGAAGAATaGGAAGAATGGGTCCCTAAAACCTACCAGGGCATC +
Preference number: 3 (lower is better)
Translates to: ARPTSQSEPLEE*EEWVPKTYQGI
Trigger: GATGCCCTGGTAGGTTTTAGGGACCCATTCTTCCCATTCTTCTAGGGGTTCTGACTGGCTGGTGGGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp TGGGAAGGCTGTGCGAAGCTGGGGCCTGTCTGCCCGGGCAGGCAGAGAGTTTGGGGTCCCAAAATTCCATaGCAAATCATCCCTAAATTA +
Preference number: 3 (lower is better)
Translates to: WEGCAKLGPVCPGRQRVWGPKIP*QIIPKL
Trigger: TAATTTAGGGATGATTTGCAATGGAATTTTGGGACC...CCAAACTCTCTGCCTGCCCGGGCAGACAGGCCCCAGCTTCGCACAGCCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 72 bp CCAACCCATTCCCCTAGGCAAACACTGGCTCACAGATaGAATCAAGAACAGTTCTCTCCAAAGGCACCTGGG +
Preference number: 3 (lower is better)
Translates to: PTHSPRQTLAHR*NQEQFSPKAPG
Trigger: CCCAGGTGCCTTTGGAGAGAACTGTTCTTGATTGCATCTGTGAGCCAGTGTTTGCCTAGGGGAATGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CCA 72 bp CAGATGCAATCAAGAACAGTTCTCTCCAAAGGCACCTaGGGAGGCCACTTCCAAGCAGCTCCCTTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: QMQSRTVLSKGT*GGHFQAAPFKE
Trigger: TTCTTTAAAGGGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGATTGCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 72 bp CACAAACCTAGGGTATCTTTTATAACGTCTGCATGCTaGAGACGGAGCTCAGGACAACTGATGAAGTCCACG +
Preference number: 3 (lower is better)
Translates to: HKPRVSFITSAC*RRSSGQLMKST
Trigger: CGTGGACTTCATCAGTTGTCCTGAGCTCCGTCTGCAGCATGCAGACGTTATAAAAGATACCCTAGGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 72 bp CGTCACAAACCTAGGGTATCTTTTATAACGTCTGCATaGTGCAGACGGAGCTCAGGACAACTGATGAAGTCC +
Preference number: 3 (lower is better)
Translates to: RHKPRVSFITSA*CRRSSGQLMKS
Trigger: GGACTTCATCAGTTGTCCTGAGCTCCGTCTGCAGCATGCAGACGTTATAAAAGATACCCTAGGTTTGTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR-3UTR CAA 90 bp TGTGCGGACAAAACACAAGAACCATCTGGAACAATTCACAGCTTTGTTGTAGGCAAAGACCTACCCCCATaGGATACTCTTTGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: CADKTQEPSGTIHSFVVGKDLPP*DTLWVP
Trigger: TGGGACCCAAAGAGTATCCAATGGGGGTAGGTCTTT...GCCTACAACAAAGCTGTGAATTGTTCCAGATGGTTCTTGTGTTTTGTCCGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR GCA 72 bp CCCCCATTGGATACTCTTTGGGTCCCAAAATTCCATTaGAAATCATCCCTAAATTATTCACTATCCACCCAT +
Preference number: 3 (lower is better)
Translates to: PPLDTLWVPKFH*KSSLNYSLSTH
Trigger: ATGGGTGGATAGTGAATAATTTAGGGATGATTTGCAATGGAATTTTGGGACCCAAAGAGTATCCAATGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp GGGGCTGGGAGGTCCGGTCTCAGAGCATCCTGGGACTATTGCACAGTGACTGAGAGCAGCCGGTGCAGCTaGGGCTGGCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: GAGRSGLRASWDYCTVTESSRCS*GWLSPI
Trigger: GATTGGACTCAGCCAGCCCCAGCTGCACCGGCTGCT...CTCAGTCACTGTGCAATAGTCCCAGGATGCTCTGAGACCGGACCTCCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp CTCCCTGTGGCCCAGGAAGATCTCCGCAAGGCCCACCAGCCAGTCAGAACCCCTCTGCCCAGCATCATCTaGTTCTTGCAGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPVAQEDLRKAHQPVRTPLPSII*FLQVRS
Trigger: GCTCCTCACCTGCAAGAACCAGATGATGCTGGGCAG...AGGGGTTCTGACTGGCTGGTGGGCCTTGCGGAGATCTTCCTGGGCCACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR TCA 90 bp AGTAAGAGAGGGACCAGGCATACAGGCATCCCAGCTGGGACGGTAACCCAGAGCTCTGGTTCTTGCAGGTaGGGAGCCCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKRGTRHTGIPAGTVTQSSGSCR*GAHRRQ
Trigger: CTGCCTCCTATGGGCTCCTCACCTGCAAGAACCAGA...GCTCTGGGTTACCGTCCCAGCTGGGATGCCTGTATGCCTGGTCCCTCTCTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR GCA 90 bp TCAAGAACAGTTCTCTCCAAAGGCACCTGGGGAGGCCACTTCCAAGCAGCTCCCGTAATGATCGGTCAGTaGGTCCTGGAGCGCCCTACT +
Preference number: 4 (lower is better)
Translates to: SRTVLSKGTWGGHFQAAPVMIGQ*VLERPT
Trigger: AGTAGGGCGCTCCAGGACGCACTGACCGATCATTAC...GGGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp GCAGAAACTGAGGAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTGGAGAGAGTCCTCAGGAGACTaGAGAGGAAACCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: AETEELRNLGHRMPWRWRESSGD*RGNPRR
Trigger: CCGCCGTGGGTTTCCTCTCCAGTCTCCTGAGGACTC...TCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTCCTCAGTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR GCA 90 bp GCAGAAACTGAGGAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTGGAGATCGAGGGGCTGCTCCTaGCCAGCATCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AETEELRNLGHRMPWRWRSRGCS*PASSGS
Trigger: AGAACCAGATGATGCTGGGCAGGAGCAGCCCCTCGA...TCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTCCTCAGTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp ATCAAGAACAGTTCTCTCCAAAGGCACCTGGGGAGGCCACTTCCAAGCAGCTCCCATACAGGACACAGATaGAGCCATCCTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: IKNSSLQRHLGRPLPSSSHTGHR*SHPPRC
Trigger: GCATCGGGGAGGATGGCTCCATCTGTGTCCTGTATG...GGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR GCA 90 bp GCAGAAACTGAGGAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTGGAGAAAAACCTTGAGTCTCTaGTCGCTCACGCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: AETEELRNLGHRMPWRWRKTLSL*SLTQPR
Trigger: TCGGGGCTGCGTGAGCGAGCAGAGACTCAAGGTTTT...TCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTCCTCAGTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp GAGAGGGACCAGGCATACAGGCATCCCAGCTGGGACGGTAACCCAGAGCAGACCGATAGCCAGAACCTTTaGATGGTTTTTCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: ERDQAYRHPSWDGNPEQTDSQNL*MVFLET
Trigger: GGTTTCCAGAAAAACCATCCAAAGGTTCTGGCTATC...GGTCTGCTCTGGGTTACCGTCCCAGCTGGGATGCCTGTATGCCTGGTCCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp CAGGTTGAGGTATACGGTGGCCTGTTGTCAGGGCAGCATGAGAACAGTAGAGTGTGGCTGAGTCCAATCTaGCTGGCCACCTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: QVEVYGGLLSGQHENSRVWLSPI*LATLLM
Trigger: CATCAGCAAGGTGGCCAGCCAGATTGGACTCAGCCA...CACTCTACTGTTCTCATGCTGCCCTGACAACAGGCCACCGTATACCTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR TCA 90 bp ATCAAGAACAGTTCTCTCCAAAGGCACCTGGGGAGGCCACTTCCAAGCAGCTCCGGTCCATCTTGTGGTTaGTACGGATACAGCGATAGC +
Preference number: 4 (lower is better)
Translates to: IKNSSLQRHLGRPLPSSSGPSCG*YGYSDS
Trigger: GCTATCGCTGTATCCGTATCAACCACAAGATGGACC...GGAGCTGCTTGGAAGTGGCCTCCCCAGGTGCCTTTGGAGAGAACTGTTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CAA 72 bp AGGGGTGACGGGCTAGCTCTAGCTCTGTCCTTCAGTTaGAGAGACTTGAGGCCTTCTAAGAAGCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: RGDGLALALSFS*RDLRPSKKPSS
Trigger: TGATGAGGGCTTCTTAGAAGGCCTCAAGTCTCTCAAACTGAAGGACAGAGCTAGAGCTAGCCCGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR TCA 90 bp ATAAATTTGGATTTTACTAAGAGAGAGAGAGAGGTAACCTCCCCCACAGGTGCTGCAGCTGGGGCTGGCTaGGTCCAATCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: INLDFTKREREVTSPTGAAAGAG*VQSGWP
Trigger: TGGCCAGCCAGATTGGACTCAGCCAGCCCCAGCTGC...AGCACCTGTGGGGGAGGTTACCTCTCTCTCTCTCTTAGTAAAATCCAAATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR GCA 90 bp ACCAGCCAGTCAGAACCCCTAGAAGAATGGGAAGAATGGGTCCCTAAAACCTACAGCCATCCTCCCCGATaGGGTAAGACACTTCATAGG +
Preference number: 4 (lower is better)
Translates to: TSQSEPLEEWEEWVPKTYSHPPR*GKTLHR
Trigger: CCTATGAAGTGTCTTACCGCATCGGGGAGGATGGCT...GTAGGTTTTAGGGACCCATTCTTCCCATTCTTCTAGGGGTTCTGACTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp ATAAATTTGGATTTTACTAAGAGAGAGAGAGAGGTAACCTCCCCCACAGGTGCTACAGGGTCAGCTCACTaGGCAGCAGCCGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: INLDFTKREREVTSPTGATGSAH*AAAGAA
Trigger: AGCTGCACCGGCTGCTGCCCAGTGAGCTGACCCTGT...AGCACCTGTGGGGGAGGTTACCTCTCTCTCTCTCTTAGTAAAATCCAAATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CAA 72 bp GGGCTAGCTCTAGCTCTGTCCTTCAGTTTGAGAGACTaGAGGCCTTCTAAGAAGCCCTCATCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GLALALSFSLRD*RPSKKPSSVSL
Trigger: CAGTGACACTGATGAGGGCTTCTTAGAAGGCCTCAAGTCTCTCAAACTGAAGGACAGAGCTAGAGCTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp TCCGGTCTCAGAGCATCCTGGGACTATTGCACAGTGACTGAGAACGCTTGTCCTGCCAGAACCTTTGGATaGTTTTTCTGGAAACCAGTG +
Preference number: 4 (lower is better)
Translates to: SGLRASWDYCTVTENACPARTFG*FFWKPV
Trigger: CACTGGTTTCCAGAAAAACCATCCAAAGGTTCTGGC...AGGACAAGCGTTCTCAGTCACTGTGCAATAGTCCCAGGATGCTCTGAGACCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CCA 90 bp ATAAATTTGGATTTTACTAAGAGAGAGAGAGAGGTAACCTCCCCCACAGGTGCTATGGGGTCCATCTTGTaGTTGATACGGATACAGCGA +
Preference number: 4 (lower is better)
Translates to: INLDFTKREREVTSPTGAMGSIL*LIRIQR
Trigger: TCGCTGTATCCGTATCAACCACAAGATGGACCCCAT...AGCACCTGTGGGGGAGGTTACCTCTCTCTCTCTCTTAGTAAAATCCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CAA 72 bp ACCCCCATTGGATACTCTTTGGGTCCCAAAATTCCATaGCAAATCATCCCTAAATTATTCACTATCCACCCA +
Preference number: 4 (lower is better)
Translates to: TPIGYSLGPKIP*QIIPKLFTIHP
Trigger: TGGGTGGATAGTGAATAATTTAGGGATGATTTGCAATGGAATTTTGGGACCCAAAGAGTATCCAATGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
3UTR CAA 72 bp CAGAACAGTAAATATTGCACACATCTACAAATAAATTaGGATTTTACTAAGAGAGAGAGAGAGGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: QNSKYCTHLQIN*DFTKREREVTS
Trigger: GGAGGTTACCTCTCTCTCTCTCTTAGTAAAATCCAAATTTATTTGTAGATGTGTGCAATATTTACTGTTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CCA 90 bp GGATCAACCCACAGGGTCAGCTCACTGGGCAGCAGCCGGTGCAGCTaGGGCTGGCTGAGTCCAATCTGGCTGGCCACCTTGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: GSTHRVSSLGSSRCS*GWLSPIWLATLLMM
Trigger: CATCATCAGCAAGGTGGCCAGCCAGATTGGACTCAGCCAGCCCCAGCTGCACCGGCTGCTGCCCAGTGAGCTGACCCTGTGGGTTGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS TCA 90 bp TCTTCGAGGGGCTGCTCCTGCCCAGCATCATCTGGTTCTTGCAGGTaGGGAGCCCATAGGAGGCAGCCACCGGGGCCTCCTCATACAGGA +
Preference number: 5 (lower is better)
Translates to: SSRGCSCPASSGSCR*GAHRRQPPGPPHTG
Trigger: TCCTGTATGAGGAGGCCCCGGTGGCTGCCTCCTATGGGCTCCTCACCTGCAAGAACCAGATGATGCTGGGCAGGAGCAGCCCCTCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS GCA 90 bp TCGGTCAGTGCGTCCTGGAGCGCCCTACTGAAAACCTTGAGTCTCTaGTCGCTCACGCAGCCCCGAGTCCTCAGGAGACTGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SVSASWSALLKTLSL*SLTQPRVLRRLERK
Trigger: TTTCCTCTCCAGTCTCCTGAGGACTCGGGGCTGCGTGAGCGAGCAGAGACTCAAGGTTTTCAGTAGGGCGCTCCAGGACGCACTGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CAA 90 bp GCAGAAACTGAGGAGCTGAGAAATCTAGGACACAGGATGCCATGGCGGTGGAGAATCTGGCTGGCCACCTaGCTGATGATGGGGTCCATC +
Preference number: 5 (lower is better)
Translates to: AETEELRNLGHRMPWRWRIWLAT*LMMGSI
Trigger: GATGGACCCCATCATCAGCAAGGTGGCCAGCCAGAT...TCTCCACCGCCATGGCATCCTGTGTCCTAGATTTCTCAGCTCCTCAGTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CAA 90 bp TGGAGCTTTGAGCCACCTCTCAAAGGAATAGTGGTAGCAGCATTCAGACTGTCGGCCCTACTGAAAACCTaGAGTCTCTGCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: WSFEPPLKGIVVAAFRLSALLKT*SLCSLT
Trigger: CGTGAGCGAGCAGAGACTCAAGGTTTTCAGTAGGGC...CGACAGTCTGAATGCTGCTACCACTATTCCTTTGAGAGGTGGCTCAAAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS-3UTR CAA 90 bp ACCAGCCAGTCAGAACCCCTAGAAGAATGGGAAGAATGGGTCCCTAAAACCTACATGATGGGGTCCATCTaGTGGTTGATACGGATACAG +
Preference number: 5 (lower is better)
Translates to: TSQSEPLEEWEEWVPKTYMMGSI*WLIRIQ
Trigger: CTGTATCCGTATCAACCACAAGATGGACCCCATCAT...GTAGGTTTTAGGGACCCATTCTTCCCATTCTTCTAGGGGTTCTGACTGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CCA 72 bp TCTGCTCGCTCACGCAGCCCCGAGTCCTCAGGAGACTaGAGAGGAAACCCACGGCGGCGGCGATCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: SARSRSPESSGD*RGNPRRRRSPG
Trigger: TCCCGGAGATCGCCGCCGCCGTGGGTTTCCTCTCCAGTCTCCTGAGGACTCGGGGCTGCGTGAGCGAGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CCA 72 bp CACAGGGTCAGCTCACTGGGCAGCAGCCGGTGCAGCTaGGGCTGGCTGAGTCCAATCTGGCTGGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: HRVSSLGSSRCS*GWLSPIWLATL
Trigger: CAAGGTGGCCAGCCAGATTGGACTCAGCCAGCCCCAGCTGCACCGGCTGCTGCCCAGTGAGCTGACCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS GCA 72 bp GCGTCCTGGAGCGCCCTACTGAAAACCTTGAGTCTCTaGTCGCTCACGCAGCCCCGAGTCCTCAGGAGACTG +
Preference number: 6 (lower is better)
Translates to: ASWSALLKTLSL*SLTQPRVLRRL
Trigger: CAGTCTCCTGAGGACTCGGGGCTGCGTGAGCGAGCAGAGACTCAAGGTTTTCAGTAGGGCGCTCCAGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CCA 72 bp AGCAGCCGGTGCAGCTGGGGCTGGCTGAGTCCAATCTaGCTGGCCACCTTGCTGATGATGGGGTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: SSRCSWGWLSPI*LATLLMMGSIL
Trigger: CAAGATGGACCCCATCATCAGCAAGGTGGCCAGCCAGATTGGACTCAGCCAGCCCCAGCTGCACCGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CAA 72 bp TCGGTCAGTGCGTCCTGGAGCGCCCTACTGAAAACCTaGAGTCTCTGCTCGCTCACGCAGCCCCGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: SVSASWSALLKT*SLCSLTQPRVL
Trigger: GAGGACTCGGGGCTGCGTGAGCGAGCAGAGACTCAAGGTTTTCAGTAGGGCGCTCCAGGACGCACTGACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS CAA 72 bp AGCTGGGGCTGGCTGAGTCCAATCTGGCTGGCCACCTaGCTGATGATGGGGTCCATCTTGTGGTTGATACGG +
Preference number: 6 (lower is better)
Translates to: SWGWLSPIWLAT*LMMGSILWLIR
Trigger: CCGTATCAACCACAAGATGGACCCCATCATCAGCAAGGTGGCCAGCCAGATTGGACTCAGCCAGCCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7
CDS GCA 72 bp TTCTGGAAACCAGTGGTGTTTGTAATGATCGGTCAGTaGGTCCTGGAGCGCCCTACTGAAAACCTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: FWKPVVFVMIGQ*VLERPTENLES
Trigger: AGACTCAAGGTTTTCAGTAGGGCGCTCCAGGACGCACTGACCGATCATTACAAACACCACTGGTTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020692.7