Pregenerated sensors for BTG1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098348Ensembl transcript IDs: ENSMUST00000089060.5
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CAA 72 bp | ACGCTCCTCCTTGCAACCGCTTCTGCTATCTACCATTaGTGCATTGGTGCTGTTGTGAGAGCTACCTCCCAC | + |
Preference number: 6 (lower is better) Translates to: TLLLATASAIYH*CIGAVVRATSH Trigger: GTGGGAGGTAGCTCTCACAACAGCACCAATGCACAAATGGTAGATAGCAGAAGCGGTTGCAAGGAGGAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089060.5 |
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CDS GCA 72 bp | TTCTGCGCAAAAGACGCTCCTCCTTGCAACCGCTTCTaGTATCTACCATTTGTGCATTGGTGCTGTTGTGAG | + |
Preference number: 6 (lower is better) Translates to: FCAKDAPPCNRF*YLPFVHWCCCE Trigger: CTCACAACAGCACCAATGCACAAATGGTAGATAGCAGAAGCGGTTGCAAGGAGGAGCGTCTTTTGCGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089060.5 |
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CDS CAA 72 bp | TTAGCAGAGTTTGTTCTGCGCAAAAGACGCTCCTCCTaGCAACCGCTTCTGCTATCTACCATTTGTGCATTG | + |
Preference number: 6 (lower is better) Translates to: LAEFVLRKRRSS*QPLLLSTICAL Trigger: CAATGCACAAATGGTAGATAGCAGAAGCGGTTGCAAGGAGGAGCGTCTTTTGCGCAGAACAAACTCTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089060.5 |