Pregenerated sensors for BTG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036478Ensembl transcript IDs: ENSMUST00000038377.9
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACAGGTAAATCTCTGCGTTCCAGGGTATCATGGTGTACATACTaGGCTCCGAGCCAGTCAAGGATACACAGTGAGACCCTTTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: ETGKSLRSRVSWCTY*APSQSRIHSETLFQ Trigger: TTGAAAAAGGGTCTCACTGTGTATCCTTGACTGGCTCGGAGCTCAGTATGTACACCATGATACCCTGGAACGCAGAGATTTACCTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 90 bp | GGATTGTTATCTTCACTTCCCCAGGAAGCAGTGACTGGGATCCTTTaGGCATCGCCACTTTTGGAAGATGTTACCTCTGTCTTTATCCTC | + |
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Preference number: 1 (lower is better) Translates to: GLLSSLPQEAVTGIL*ASPLLEDVTSVFIL Trigger: GAGGATAAAGACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGATAACAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 90 bp | ACCAGAAACTACCAACAATACACATTTCTCTGGATTACCCAAGTCTaGAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: TRNYQQYTFLWITQV*NPGRKPVSQLSPIC Trigger: ACAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGTAATCCAGAGAAATGTGTATTGTTGGTAGTTTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 90 bp | AAATGTCACAATGAGACCCATTATTGTGTAGAAAGAAGAAGAATCTaGGCTCCTGGTCTGGAGCTGTGCCATATTATCCGAGACGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: KCHNETHYCVERRRI*APGLELCHIIRDAC Trigger: GCAGGCGTCTCGGATAATATGGCACAGCTCCAGACCAGGAGCTCAGATTCTTCTTCTTTCTACACAATAATGGGTCTCATTGTGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 90 bp | AAGCTGCTGGCAAACTCCGAGAAGCTTATCGAAAGCACCACAACCTaGAATCGGAAAAAGACGGGGCAAGTTTCTTTAAACTTTCACATG | + |
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Preference number: 1 (lower is better) Translates to: KLLANSEKLIESTTT*NRKKTGQVSLNFHM Trigger: CATGTGAAAGTTTAAAGAAACTTGCCCCGTCTTTTTCCGATTTCAGGTTGTGGTGCTTTCGATAAGCTTCTCGGAGTTTGCCAGCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 90 bp | AGCTCAAACCCCGTTAATATTTACAGCAAAATTACTAGTCAGGTGTaGTGGTGCACGCCTTTAATTCCAGTATTTGGGAGGCAGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: SSNPVNIYSKITSQV*WCTPLIPVFGRQRQ Trigger: CTGTCTCTGCCTCCCAAATACTGGAATTAAAGGCGTGCACCACCACACCTGACTAGTAATTTTGCTGTAAATATTAACGGGGTTTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 90 bp | GAGTTCCCAAATGATACACAAATTGGCCAGCAGGAGAGTGAGACCTaGTTTAAACCAGCCTGGGATATAATGCTCAAACTCAAATTTGAA | + |
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Preference number: 1 (lower is better) Translates to: EFPNDTQIGQQESET*FKPAWDIMLKLKFE Trigger: TTCAAATTTGAGTTTGAGCATTATATCCCAGGCTGGTTTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGTATCATTTGGGAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 90 bp | ACACAAATTGGCCAGCAGGAGAGTGAGACCTGCTTTAAACCAGCCTaGGATATAATGCTCAAACTCAAATTTGAAATGAGGGACCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: TQIGQQESETCFKPA*DIMLKLKFEMRDLL Trigger: TAAAAGGTCCCTCATTTCAAATTTGAGTTTGAGCATTATATCCCAGGCTGGTTTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTGTGCGTCATCTGGGCTCTaGGTGCTCCCCGTAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TQVCNPGRKPVSQLSPICASSGL*VLPVGK Trigger: TTTACCTACGGGGAGCACGCAGAGCCCAGATGACGC...ACAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 90 bp | GAGGTGAGAGTCACAGGAAACAGCTGGATGCTAGGTCTGAGATACTaGCAGGCTTCACAGGCCGGATGTCACCTGAACTCTAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: EVRVTGNSWMLGLRY*QASQAGCHLNSKTA Trigger: TGCAGTTTTAGAGTTCAGGTGACATCCGGCCTGTGAAGCCTGCAAGTATCTCAGACCTAGCATCCAGCTGTTTCCTGTGACTCTCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | AACTACTCAAGTAGCTATGCTGTGCTGCACACACAGGCTCGGCTCAGTGGTCTGGTAACTCTTGCAAGATaGGAACCAGAAAGCGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: NYSSSYAVLHTQARLSGLVTLAR*EPESGR Trigger: TCTGCCGCTTTCTGGTTCTCATCTTGCAAGAGTTAC...CAGACCACTGAGCCGAGCCTGTGTGTGCAGCACAGCATAGCTACTTGAGTAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCAGGTCTTTTCAAAGCCTaGTGCCATGGCAGAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSLPSLECEAQTPLIFTAGLFKA*CHGRAW Trigger: CCAGGCTCTGCCATGGCAGCAGGCTTTGAAAAGACC...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAGTGTTCAAAGCCAGTCAGGCAGCTTCCAAGGAGTTCCCAAATGATACACCCCTGCTATGGAAATaGGGACAAAGCCAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPVFKASQAASKEFPNDTPLLWK*GQSQGF Trigger: GAAGCCCTGGCTTTGTCCGCATTTCCATAGCAGGGG...TGTATCATTTGGGAACTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | ATTACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTCATGTTTTCACATGCTaGCCCTCCCCCAATCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ITQVCNPGRKPVSQLSPIHVFTC*PSPNPV Trigger: AACTGGATTGGGGGAGGGGCAGCATGTGAAAACATG...AATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 90 bp | AAGCCAGTCAGGCAGCTTCCAAGGAGTTCCCAAATGATACACAAATaGGCCAGCAGGAGAGTGAGACCTGCTTTAAACCAGCCTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: KPVRQLPRSSQMIHK*ASRRVRPALNQPGI Trigger: TATCCCAGGCTGGTTTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGTATCATTTGGGAACTCCTTGGAAGCTGCCTGACTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAAGTAGCTATGCTGTGCTGCACACACAGGCTCGGCTCAGTGGTCTGAAATGTACAGAGAGCTaGCTGGTGCTAACAACCACA | + |
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Preference number: 2 (lower is better) Translates to: NYSSSYAVLHTQARLSGLKCTES*LVLTTT Trigger: TGTGGTTGTTAGCACCAGCCAGCTCTCTGTACATTT...CAGACCACTGAGCCGAGCCTGTGTGTGCAGCACAGCATAGCTACTTGAGTAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCAAGGTCTGGGAGAAACTaGAACCACCCTTCGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: PSLPSLECEAQTPLIFTARSGRN*NHPSTS Trigger: TGAAGTCGAAGGGTGGTTTCAGTTTCTCCCAGACCT...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTGTCCATGCTTAAAACATTaGGCTTTCCTATTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TQVCNPGRKPVSQLSPICPCLKH*AFLLSC Trigger: GCAGCTCAATAGGAAAGCTCAATGTTTTAAGCATGG...ACAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAACATTAGCATGTCAAAGCGGCAGATGGCTCTaGTGTGATAAGCCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ASPEPQDLWSQNKTLACQSGRWL*CDKPVL Trigger: AAGAACAGGCTTATCACAGCAGAGCCATCTGCCGCT...TTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGTCCACATCAAGCCAGGCTTCATGGTGCTAAGTGTAATCTCAGTCAGACATCTGAGCTCCTGGTCTaGAGCTGTGCCATATTATCC | + |
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Preference number: 2 (lower is better) Translates to: YSPHQARLHGAKCNLSQTSELLV*SCAILS Trigger: GGATAATATGGCACAGCTCCAGACCAGGAGCTCAGA...TGTCTGACTGAGATTACACTTAGCACCATGAAGCCTGGCTTGATGTGGACTGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 90 bp | AGGATTGTTATCTTCACTTCCCCAGGAAGCAGTGACTGGGATCCTTaGGGCATCGCCACTTTTGGAAGATGTTACCTCTGTCTTTATCCT | + |
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Preference number: 2 (lower is better) Translates to: RIVIFTSPGSSDWDP*GIATFGRCYLCLYP Trigger: AGGATAAAGACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGATAACAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAACATTAGCATGTCAACAAAAACACAAGGTCTaGCCATTTCCCCCAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASPEPQDLWSQNKTLACQQKHKV*PFPPGH Trigger: ATGACCTGGGGGAAATGGTCAGACCTTGTGTTTTTG...TTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | TACAGTCCACATCAAGCCAGGCTTCATGGTGCTAAGTGTAATCTCAGTCAGACACCCTGCAAGGTTGACTaGGAAAGAGGGTTCTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: YSPHQARLHGAKCNLSQTPCKVD*ERGFFE Trigger: TTCAAAGAACCCTCTTTCGCAGTCAACCTTGCAGGG...TGTCTGACTGAGATTACACTTAGCACCATGAAGCCTGGCTTGATGTGGACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCAATTGGGTATAAGGTCTaGGAGAAACTGAAACCACCC | + |
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Preference number: 2 (lower is better) Translates to: PSLPSLECEAQTPLIFTAIGYKV*EKLKPP Trigger: GGGTGGTTTCAGTTTCTCCCAGACCTTATACCCAAT...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAAACCACCAGAAACTACCAACAATACACATTTCTCTGGATTACCCAAGTCTCTCGGCTCAGTGGTCTaGGGAATGGAGGTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TKPPETTNNTHFSGLPKSLGSVV*GMEVRV Trigger: GACTCTCACCTCCATTCCCCAGACCACTGAGCCGAG...AGACTTGGGTAATCCAGAGAAATGTGTATTGTTGGTAGTTTCTGGTGGTTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAACATTAGCATGTCAAGAGACAGTGTCTTTTTaGAGGGTCTTTTCAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ASPEPQDLWSQNKTLACQETVSF*RVFSKP Trigger: AGGCTTTGAAAAGACCCTTCAAAAAGACACTGTCTC...TTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 90 bp | AAATATCAGTTTATCTTCTACAACCCCCAAACTAGCAGCATGTCTTaGCCCATGAGGTACACGTTACTAACCTCCAGCACAACACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KYQFIFYNPQTSSMS*PMRYTLLTSSTTLS Trigger: ACTGAGTGTTGTGCTGGAGGTTAGTAACGTGTACCTCATGGGCAAAGACATGCTGCTAGTTTGGGGGTTGTAGAAGATAAACTGATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCAGGCTATTTAAATCACTaGAAGGTACTGTCCAAACTA | + |
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Preference number: 2 (lower is better) Translates to: PSLPSLECEAQTPLIFTAGYLNH*KVLSKL Trigger: TAGTTTGGACAGTACCTTTCAGTGATTTAAATAGCC...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCAAGACTCTTACCCAATTaGGTACAAGGAAAGTTACAA | + |
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Preference number: 2 (lower is better) Translates to: PSLPSLECEAQTPLIFTARLLPN*VQGKLQ Trigger: TTGTAACTTTCCTTGTACTCAATTGGGTAAGAGTCT...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAACCACCAGAAACTACCAACAATACACATTTCTCTGGATTACCCAAGTCTTCCGGCAGAAAGGCCTaGAATTCCAGAACTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: TKPPETTNNTHFSGLPKSSGRKA*NSRTIS Trigger: TGAGATAGTTCTGGAATTGCAGGCCTTTCTGCCGGA...AGACTTGGGTAATCCAGAGAAATGTGTATTGTTGGTAGTTTCTGGTGGTTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTTAAAAACATGTTATCAAACCTCACTGCTAACAGGAGGTTTACCCTGGAGCGCTAACAACCACAGTTaGGACAGTGTCTTTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLKTCYQTSLLTGGLPWSANNHS*DSVFLK Trigger: CTTCAAAAAGACACTGTCTCAACTGTGGTTGTTAGC...GCTCCAGGGTAAACCTCCTGTTAGCAGTGAGGTTTGATAACATGTTTTTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTTAAAAACATGTTATCAAACCTCACTGCTAACAGGAGGTTTACCCTGGAGCCAGGGCTTCAACTTTTaGGAAAAGAAGTGCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: VLKTCYQTSLLTGGLPWSQGFNF*EKKCIN Trigger: GTTGATGCACTTCTTTTCTCAAAAGTTGAAGCCCTG...GCTCCAGGGTAAACCTCCTGTTAGCAGTGAGGTTTGATAACATGTTTTTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTGAAATCGGAAAAAGACGGGGCAAGTTTCTTTAAACTTTCACATGCAAAAAGTCAGGTGTGGTGGTaGACGCCTTTAATTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: NLKSEKDGASFFKLSHAKSQVWW*TPLIPV Trigger: TACTGGAATTAAAGGCGTGCACCACCACACCTGACT...TTTTGCATGTGAAAGTTTAAAGAAACTTGCCCCGTCTTTTTCCGATTTCAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CCA 90 bp | GCTATGGAAATGCGGACAAAGCCAGGGCTTCAACTTTTGAGAAAAGAAGTGCATAGTTCACAAAATAGATaGTGGTTTGTGGGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: AMEMRTKPGLQLLRKEVHSSQNR*WFVGKT Trigger: AGTCTTTCCCACAAACCACCATCTATTTTGTGAACT...ATGCACTTCTTTTCTCAAAAGTTGAAGCCCTGGCTTTGTCCGCATTTCCATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTGAAATCGGAAAAAGACGGGGCAAGTTTCTTTAAACTTTCACATGCAAAAAGACAGGTAAATCTCTaGGTTCCAGGGTATCATGGT | + |
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Preference number: 2 (lower is better) Translates to: NLKSEKDGASFFKLSHAKRQVNL*VPGYHG Trigger: ACCATGATACCCTGGAACGCAGAGATTTACCTGTCT...TTTTGCATGTGAAAGTTTAAAGAAACTTGCCCCGTCTTTTTCCGATTTCAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 72 bp | CCTGGTCTGGAGCTGTGCCATATTATCCGAGACGCCTaGATTCTGGGGGCTAAAGCAGGAAGATCTAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: PGLELCHIIRDA*ILGAKAGRSRV Trigger: CACTCTAGATCTTCCTGCTTTAGCCCCCAGAATGCAGGCGTCTCGGATAATATGGCACAGCTCCAGACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | TGTCTTTTTGAAGGGTCTTTTCAAAGCCTGCTGCCATaGCAGAGCCTGGTCGCTCCCTACTCTCAACGCCAA | + |
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Preference number: 3 (lower is better) Translates to: CLFEGSFQSLLP*QSLVAPYSQRQ Trigger: TTGGCGTTGAGAGTAGGGAGCGACCAGGCTCTGCCATGGCAGCAGGCTTTGAAAAGACCCTTCAAAAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | TCTTCACTTCCCCAGGAAGCAGTGACTGGGATCCTTTaGGCATCGCCACTTTTGGAAGATGTTACCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SSLPQEAVTGIL*ASPLLEDVTSV Trigger: GACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | ATTACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTCAACGTACCTGTTGTaGGATTCCAGCTTAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: ITQVCNPGRKPVSQLSPISTYLL*DSSLGD Trigger: ATCCCCTAAGCTGGAATCCAACAACAGGTACGTTGA...AATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 72 bp | AGAGAGGATTGTTATCTTCACTTCCCCAGGAAGCAGTaGCTGGGATCCTTTGGGCATCGCCACTTTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: REDCYLHFPRKQ*LGSFGHRHFWK Trigger: CTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGATAACAATCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | AGTCCAGTGTTCAAAGCCAGTCAGGCAGCTTCCAAGGAGTTCCCAAATGATACATGGGCATCGCCACTTTaGGAAGATGTTACCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SPVFKASQAASKEFPNDTWASPL*EDVTSV Trigger: GACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCA...TGTATCATTTGGGAACTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 72 bp | TACCAACAATACACATTTCTCTGGATTACCCAAGTCTaGAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: YQQYTFLWITQV*NPGRKPVSQLS Trigger: ACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGTAATCCAGAGAAATGTGTATTGTTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | AGGATTGTTATCTTCACTTCCCCAGGAAGCAGTGACTaGGATCCTTTGGGCATCGCCACTTTTGGAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: RIVIFTSPGSSD*DPLGIATFGRC Trigger: ACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGATAACAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | GGCAAGTTCAAGGCTAGCCCAGAGCCTCAAGACCTCTaGTCTCAAAACAAAACATTAGCATGTCAAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GKFKASPEPQDL*SQNKTLACQGL Trigger: CAAGCCTTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGCCTTGAACTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | ATACACATTTCTCTGGATTACCCAAGTCTGCAATCCTaGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTG | + |
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Preference number: 3 (lower is better) Translates to: IHISLDYPSLQS*QEACVAAQSNL Trigger: CAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGTAATCCAGAGAAATGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | TACAGTCCACATCAAGCCAGGCTTCATGGTGCTAAGTGTAATCTCAGTCAGACAGCATCAACGTACCTGTaGTTGGATTCCAGCTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: YSPHQARLHGAKCNLSQTASTYL*LDSSLG Trigger: CCCTAAGCTGGAATCCAACAACAGGTACGTTGATGC...TGTCTGACTGAGATTACACTTAGCACCATGAAGCCTGGCTTGATGTGGACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTGTCAGCAACAAAAAGTCTaGACAGCAAAGTCAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: TQVCNPGRKPVSQLSPICQQQKV*TAKSKT Trigger: TGTCTTTGACTTTGCTGTCAAGACTTTTTGTTGCTG...ACAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | TACAGTCCACATCAAGCCAGGCTTCATGGTGCTAAGTGTAATCTCAGTCAGACAGACTGCTGTGACAAATaGGGTATAAGGTCTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: YSPHQARLHGAKCNLSQTDCCDK*GIRSGR Trigger: TCTCCCAGACCTTATACCCAATTTGTCACAGCAGTC...TGTCTGACTGAGATTACACTTAGCACCATGAAGCCTGGCTTGATGTGGACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 72 bp | ATTCCAGTATTTGGGAGGCAGAGACAGGTAAATCTCTaGGTTCCAGGGTATCATGGTGTACATACTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: IPVFGRQRQVNL*VPGYHGVHTEL Trigger: GAGCTCAGTATGTACACCATGATACCCTGGAACGCAGAGATTTACCTGTCTCTGCCTCCCAAATACTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | GGCCAGCAGGAGAGTGAGACCTGCTTTAAACCAGCCTaGGATATAATGCTCAAACTCAAATTTGAAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: GQQESETCFKPA*DIMLKLKFEMR Trigger: CCTCATTTCAAATTTGAGTTTGAGCATTATATCCCAGGCTGGTTTAAAGCAGGTCTCACTCTCCTGCTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 72 bp | CTATGGAAATGCGGACAAAGCCAGGGCTTCAACTTTTaGGAAAAGAAGTGCATCAACGTACCTGTTGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LWKCGQSQGFNF*EKKCINVPVVG Trigger: TCCAACAACAGGTACGTTGATGCACTTCTTTTCTCAAAAGTTGAAGCCCTGGCTTTGTCCGCATTTCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 72 bp | CAGGCCGGATGTCACCTGAACTCTAAAACTGCAGTTTaGATAGGCGCTTCTTTTGTTCAAGCAGCAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: QAGCHLNSKTAV*IGASFVQAATK Trigger: TTTTGTTGCTGCTTGAACAAAAGAAGCGCCTATTCAAACTGCAGTTTTAGAGTTCAGGTGACATCCGGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 72 bp | AATGATACACAAATTGGCCAGCAGGAGAGTGAGACCTaGTTTAAACCAGCCTGGGATATAATGCTCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: NDTQIGQQESET*FKPAWDIMLKL Trigger: GAGTTTGAGCATTATATCCCAGGCTGGTTTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGTATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | TATGGCAAGTTCAAGGCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAAAGACTCTTACCCAATaGAGTACAAGGAAAGTTACA | + |
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Preference number: 3 (lower is better) Translates to: YGKFKASPEPQDLWSQNKKTLTQ*STRKVT Trigger: TGTAACTTTCCTTGTACTCAATTGGGTAAGAGTCTT...TTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGCCTTGAACTTGCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR TCA 72 bp | AATGAGACCCATTATTGTGTAGAAAGAAGAAGAATCTaGGCTCCTGGTCTGGAGCTGTGCCATATTATCCGA | + |
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Preference number: 3 (lower is better) Translates to: NETHYCVERRRI*APGLELCHIIR Trigger: TCGGATAATATGGCACAGCTCCAGACCAGGAGCTCAGATTCTTCTTCTTTCTACACAATAATGGGTCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | CCCGTTAATATTTACAGCAAAATTACTAGTCAGGTGTaGTGGTGCACGCCTTTAATTCCAGTATTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PVNIYSKITSQV*WCTPLIPVFGR Trigger: CCTCCCAAATACTGGAATTAAAGGCGTGCACCACCACACCTGACTAGTAATTTTGCTGTAAATATTAACGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR GCA 72 bp | AATATTTACAGCAAAATTACTAGTCAGGTGTGGTGGTaGACGCCTTTAATTCCAGTATTTGGGAGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: NIYSKITSQVWW*TPLIPVFGRQR Trigger: TCTCTGCCTCCCAAATACTGGAATTAAAGGCGTGCACCACCACACCTGACTAGTAATTTTGCTGTAAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CCA 72 bp | GTTAATATTTACAGCAAAATTACTAGTCAGGTGTGGTaGTGCACGCCTTTAATTCCAGTATTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VNIYSKITSQVW*CTPLIPVFGRQ Trigger: CTGCCTCCCAAATACTGGAATTAAAGGCGTGCACCACCACACCTGACTAGTAATTTTGCTGTAAATATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTTAAAAACATGTTATCAAACCTCACTGCTAACAGGAGGTTTACCCTGGAGCAAAATAGATGGTGGTTaGTGGGAAAGACTCTTACCC | + |
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Preference number: 3 (lower is better) Translates to: VLKTCYQTSLLTGGLPWSKIDGG*WERLLP Trigger: GGGTAAGAGTCTTTCCCACAAACCACCATCTATTTT...GCTCCAGGGTAAACCTCCTGTTAGCAGTGAGGTTTGATAACATGTTTTTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR-3UTR CAA 90 bp | CTTTTGTTCAAGCAGCAACAAAAAGTCTTGACAGCAAAGTCAAAGACACTTCTCCCAGGGCTTCAACTTTaGAGAAAAGAAGTGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: LLFKQQQKVLTAKSKTLLPGLQL*RKEVHQ Trigger: TTGATGCACTTCTTTTCTCAAAAGTTGAAGCCCTGG...GAGAAGTGTCTTTGACTTTGCTGTCAAGACTTTTTGTTGCTGCTTGAACAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR TCA 90 bp | GCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAACATTAGCATGTCAAGCTGTCGCTCGCTCGTaGGCCCCTTGGTGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ASPEPQDLWSQNKTLACQAVARS*APWCGG Trigger: TCCTCCGCACCAAGGGGCTCACGAGCGAGCGACAGC...TTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 72 bp | GAACTGGGCAGACTGACAGGGTCCACCTGTAAAAGTTaGACTGCAAAGACAGCGTCATCTGGGCTCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ELGRLTGSTCKS*TAKTASSGLCV Trigger: CACGCAGAGCCCAGATGACGCTGTCTTTGCAGTCAAACTTTTACAGGTGGACCCTGTCAGTCTGCCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR TCA 90 bp | TACAGTCCACATCAAGCCAGGCTTCATGGTGCTAAGTGTAATCTCAGTCAGACAGGAGGAACTTGGAGATaGAGGACACCGCGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: YSPHQARLHGAKCNLSQTGGTWR*RTPRRR Trigger: TCGCCGCCGCGGTGTCCTTCATCTCCAAGTTCCTCC...TGTCTGACTGAGATTACACTTAGCACCATGAAGCCTGGCTTGATGTGGACTGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR TCA 90 bp | AGTCCAGTGTTCAAAGCCAGTCAGGCAGCTTCCAAGGAGTTCCCAAATGATACAGCTACCTCCTGCTGGTaGGGCTTCGTACAGCACGCA | + |
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Preference number: 4 (lower is better) Translates to: SPVFKASQAASKEFPNDTATSCW*GFVQHA Trigger: TGCGTGCTGTACGAAGCCTCACCAGCAGGAGGTAGC...TGTATCATTTGGGAACTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR GCA 90 bp | TATGGCAAGTTCAAGGCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAACTCTGGCTGAAAGTCTaGAGCTGTCGCTCGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: YGKFKASPEPQDLWSQNKLWLKV*SCRSLV Trigger: CACGAGCGAGCGACAGCTGCAGACTTTCAGCCAGAG...TTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGCCTTGAACTTGCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR GCA 90 bp | AACTACTCAAGTAGCTATGCTGTGCTGCACACACAGGCTCGGCTCAGTGGTCTGTGGAAGGGCTTGTTCTaGCCAAGAGAAGTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: NYSSSYAVLHTQARLSGLWKGLF*PREVPP Trigger: AGGAGGAACTTCTCTTGGGCAGAACAAGCCCTTCCA...CAGACCACTGAGCCGAGCCTGTGTGTGCAGCACAGCATAGCTACTTGAGTAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR GCA 90 bp | ACCCAAGTCTGCAATCCTGGCAGGAAGCCTGTGTCGCAGCTCAGTCCAATTTGTATGTTTGTAATGTTCTaGCAGCAGCTCCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TQVCNPGRKPVSQLSPICMFVMF*QQLLQA Trigger: AGCCTGCAGGAGCTGCTGGCAGAACATTACAAACAT...ACAAATTGGACTGAGCTGCGACACAGGCTTCCTGCCAGGATTGCAGACTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCATCCAATCCGCTGGGCTaGCTGTCCAATCAGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: PSLPSLECEAQTPLIFTASNPLG*LSNQRI Trigger: GATCCTCTGATTGGACAGGCAGCCCAGCGGATTGGA...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CCA 90 bp | TATGGCAAGTTCAAGGCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAACGTACAGCACGCAGATaGAGCCATCCTCTCCAATCC | + |
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Preference number: 4 (lower is better) Translates to: YGKFKASPEPQDLWSQNKRTARR*SHPLQS Trigger: GGATTGGAGAGGATGGCTCCATCTGCGTGCTGTACG...TTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGCCTTGAACTTGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR TCA 90 bp | GCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAAACATTAGCATGTCAAAGCCTGAACAACTCCTaGCTGCTCAGTCCAATCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASPEPQDLWSQNKTLACQSLNNS*LLSPIR Trigger: GCGGATTGGACTGAGCAGTCAGGAGTTGTTCAGGCT...TTGACATGCTAATGTTTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGCCTGCAATTCCAGAACTATCTCAAAGGTAAGGATGACATAAGGGATTCTCGCCTATCATGGTaGCGGCCCGGGTGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: QKGLQFQNYLKGKDDIRDSRLSW*RPGCRR Trigger: CCTTCTACACCCGGGCCGCCACCATGATAGGCGAGA...ATCCCTTATGTCATCCTTACCTTTGAGATAGTTCTGGAATTGCAGGCCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGCCTGCAATTCCAGAACTATCTCAAAGGTAAGGATGACATAAGGGATCGATCTCGCCTATCATaGTGGCGGCCCGGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QKGLQFQNYLKGKDDIRDRSRLS*WRPGCR Trigger: TCTACACCCGGGCCGCCACCATGATAGGCGAGATCG...ATCCCTTATGTCATCCTTACCTTTGAGATAGTTCTGGAATTGCAGGCCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 72 bp | ATCTTCACTTCCCCAGGAAGCAGTGACTGGGATCCTTaGGGCATCGCCACTTTTGGAAGATGTTACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IFTSPGSSDWDP*GIATFGRCYLC Trigger: ACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTCCTGGGGAAGTGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR TCA 90 bp | AGTCCAGTGTTCAAAGCCAGTCAGGCAGCTTCCAAGGAGTTCCCAAATGATACAAATACAACGGTAACCTaGTCCCTTGCACGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SPVFKASQAASKEFPNDTNTTVT*SLARLF Trigger: GAAAAGCCGTGCAAGGGATCAGGTTACCGTTGTATT...TGTATCATTTGGGAACTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 72 bp | GAAGCAGTGACTGGGATCCTTTGGGCATCGCCACTTTaGGAAGATGTTACCTCTGTCTTTATCCTCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: EAVTGILWASPL*EDVTSVFILMR Trigger: TCTCATGAGGATAAAGACAGAGGTAACATCTTCCAAAAGTGGCGATGCCCAAAGGATCCCAGTCACTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 72 bp | GTTAAAATAGCTAAACCAAACATTAGCCAGAAGCAGTaGGCACGAACTACTCAAGTAGCTATGCTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VKIAKPNISQKQ*ARTTQVAMLCC Trigger: GCAGCACAGCATAGCTACTTGAGTAGTTCGTGCCAACTGCTTCTGGCTAATGTTTGGTTTAGCTATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CCA 90 bp | GCTATGGAAATGCGGACAAAGCCAGGGCTTCAACTTTTGAGAAAAGAAGTGCATTCATATTGTAGTTTTTaGAAGGGCTTGTTCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AMEMRTKPGLQLLRKEVHSYCSF*KGLFCP Trigger: TGGGCAGAACAAGCCCTTCCAAAAACTACAATATGA...ATGCACTTCTTTTCTCAAAAGTTGAAGCCCTGGCTTTGTCCGCATTTCCATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| 3UTR CAA 72 bp | ACTTTCAAGTGTAATAGTGCAAATTCCCCTGCAAGGTaGACTGCGAAAGAGGGTTCTTTGAAAGACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: TFKCNSANSPAR*TAKEGSLKDRI Trigger: AATTCTGTCTTTCAAAGAACCCTCTTTCGCAGTCAACCTTGCAGGGGAATTTGCACTATTACACTTGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCCTTCCTTGGAATGTGAAGCTCAAACCCCGTTAATATTTACAGCATCGCTCGTGAGCCCCTaGGTGCGGAGGAACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSLPSLECEAQTPLIFTASLVSP*VRRNLE Trigger: CTCCAAGTTCCTCCGCACCAAGGGGCTCACGAGCGA...TGCTGTAAATATTAACGGGGTTTGAGCTTCACATTCCAAGGAAGGGAGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CAA 90 bp | TATGGCAAGTTCAAGGCTAGCCCAGAGCCTCAAGACCTCTGGTCTCAAAACAAATTGGTGCGGAGGAACTaGGAGATGAAGGACACCGCG | + |
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Preference number: 5 (lower is better) Translates to: YGKFKASPEPQDLWSQNKLVRRN*EMKDTA Trigger: CGCGGTGTCCTTCATCTCCAAGTTCCTCCGCACCAA...TTTGTTTTGAGACCAGAGGTCTTGAGGCTCTGGGCTAGCCTTGAACTTGCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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| CDS-3UTR CAA 90 bp | AACCTGAAATCGGAAAAAGACGGGGCAAGTTTCTTTAAACTTTCACATGCAAAACACGTTGGTGCTGTTTaGAGTGCTACCTCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NLKSEKDGASFFKLSHAKHVGAV*SATSCW Trigger: CCAGCAGGAGGTAGCACTCAAAACAGCACCAACGTG...TTTTGCATGTGAAAGTTTAAAGAAACTTGCCCCGTCTTTTTCCGATTTCAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038377.9 |
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