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Pregenerated sensors for BTF3L4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028568

Ensembl transcript IDs: ENSMUST00000102742.11

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGAAGTACCTTACTGGATGGATGATGAACCTTACTGGGTGATGTaGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACA +
Preference number: 1 (lower is better)
Translates to: AEVPYWMDDEPYWVM*VNMATESLNLDQDT
Trigger: TGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCACCCAGTAAGGTTCATCATCCATCCAGTAAGGTACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR CAA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATaGGTGCTGGGACTAAGCTCAGGTCTTCTACAAGGGCAGTGCACC +
Preference number: 2 (lower is better)
Translates to: RRLELELQAVLSHLT*VLGLSSGLLQGQCT
Trigger: GGTGCACTGCCCTTGTAGAAGACCTGAGCTTAGTCCCAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR TCA 90 bp TTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGGGACTAAGCTCAGGTCTTTGGCAACAGAGAGCCTaGATCTGGACCAGGACACAC +
Preference number: 2 (lower is better)
Translates to: LQAVLSHLTLVLGLSSGLWQQRA*IWTRTH
Trigger: GTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCA...AAGACCTGAGCTTAGTCCCAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATGACTCGCCTCAGCTCTaGAATCAGAGGTACTCACTT +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHDSPQL*NQRYSL
Trigger: AAGTGAGTACCTCTGATTGCAGAGCTGAGGCGAGTC...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATTTGCCCGCTGCTCTCTaGTTCTGTCTTTTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHLPAAL*FCLLLG
Trigger: TCCAAGCAAAAGACAGAAGCAGAGAGCAGCGGGCAA...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGTACAACATTGCCCGCTaGTCTCTGCTTCTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: RRLELELQAVLSHLTLVLYNIAR*SLLLSF
Trigger: AAAAGACAGAAGCAGAGAGCAGCGGGCAATGTTGTA...CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR CCA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGACTCTCGCAGCAATCTaGTGGCAAAATAGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: RRLELELQAVLSHLTLVLTLAAI*WQNSSG
Trigger: TCCTGAACTATTTTGCCACCAGATTGCTGCGAGAGT...CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR TCA 90 bp TTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGGGACTAAGCTCAGGTCTTCTGCAGTTAGTTTGGTaGTGGGCCAGAAAACAACAG +
Preference number: 2 (lower is better)
Translates to: LQAVLSHLTLVLGLSSGLLQLVW*WARKQQ
Trigger: CTGTTGTTTTCTGGCCCATCACCAAACTAACTGCAG...AAGACCTGAGCTTAGTCCCAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGCCAAGAATAGGAAACTaGCTGAAGAAATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RRLELELQAVLSHLTLVLPRIGN*LKKFSC
Trigger: GCAGGAGAATTTCTTCAGGCAGTTTCCTATTCTTGG...CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATTCTGCTTCTGTCTTTTaGTTGGACAGGCAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHSASVF*LDRQRN
Trigger: GTTCCTTTGCCTGTCCAAGCAAAAGACAGAAGCAGA...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR TCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATCATTGTTCCTCGAGGTaGGGAACAAAAAGAGGAATT +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHHCSSR*GTKRGI
Trigger: AATTCCTCTTTTTGTTCCTCACCTCGAGGAACAATG...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATAACTGTTATCCAATCTaGTGTCCACTGTGTACACAC +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHNCYPI*CPLCTH
Trigger: GTGTGTACACAGTGGACAGCAGATTGGATAACAGTT...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp TTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGGGACTAAGCTCAGGTCTTCAAAAGTTGGCATGCTaGAAGGTTAAGCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: LQAVLSHLTLVLGLSSGLQKLAC*KVKLQL
Trigger: TAACTGCAGCTTAACCTTGCAGCATGCCAACTTTTG...AAGACCTGAGCTTAGTCCCAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR CCA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGCTCTCAATATGCTGTTaGTCTTGCATCTTAAGTATC +
Preference number: 2 (lower is better)
Translates to: RRLELELQAVLSHLTLVLLSICC*SCILSI
Trigger: GATACTTAAGATGCAAGACCAACAGCATATTGAGAG...CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR GCA 90 bp GTGATGTGGGTGAACATGGCAACAGAGAGCCTGAATCTGGACCAGGACACACATTACCATTTCAGAGAATaGCTATTTATGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: VMWVNMATESLNLDQDTHYHFRE*LFMLGD
Trigger: ATCTCCTAGCATAAATAGGCATTCTCTGAAATGGTA...ATGTGTGTCCTGGTCCAGATTCAGGCTCTCTGTTGCCATGTTCACCCACATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR CCA 90 bp GACAATGGCATTGTTCCTCGAGGTGAGGAACAAAAAGAGGAATTAGGCACTCTCTGGGAAGATAGATCCTaGGAAGAAGTGCAAAATGCA +
Preference number: 2 (lower is better)
Translates to: DNGIVPRGEEQKEELGTLWEDRS*EEVQNA
Trigger: TGCATTTTGCACTTCTTCCCAGGATCTATCTTCCCA...GAGAGTGCCTAATTCCTCTTTTTGTTCCTCACCTCGAGGAACAATGCCATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR TCA 90 bp GACAATGGCATTGTTCCTCGAGGTGAGGAACAAAAAGAGGAATTAGGCACTCTCAGTAATATCAAAGGCTaGCCAGTTCATTTAAAGACC +
Preference number: 2 (lower is better)
Translates to: DNGIVPRGEEQKEELGTLSNIKG*PVHLKT
Trigger: GGTCTTTAAATGAACTGGTCAGCCTTTGATATTACT...GAGAGTGCCTAATTCCTCTTTTTGTTCCTCACCTCGAGGAACAATGCCATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR CCA 90 bp GAGATAATATGGCCTACATGTTCTTTTCATTCAAAAGGACATTCCCAGGTTCAACTCGCAGCAATCTGGTaGCAAAATAGTTCAGGACAT +
Preference number: 2 (lower is better)
Translates to: EIIWPTCSFHSKGHSQVQLAAIW*QNSSGH
Trigger: ATGTCCTGAACTATTTTGCCACCAGATTGCTGCGAG...TTGAACCTGGGAATGTCCTTTTGAATGAAAAGAACATGTAGGCCATATTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR TCA 72 bp AAGGAAGCCAGCAGAGTATGTCAGACGCCTGGAGCTTaGGTTGCAGGCAGTTTTAAGCCACCTGACATTGGT +
Preference number: 3 (lower is better)
Translates to: KEASRVCQTPGA*VAGSFKPPDIG
Trigger: ACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCTGACATACTCTGCTGGCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR-3UTR CAA 90 bp AGACGCCTGGAGCTTGAGTTGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTGAGCTTGAAACAAAAGTaGGCATGCTGCAAGGTTAAG +
Preference number: 3 (lower is better)
Translates to: RRLELELQAVLSHLTLVLSLKQK*ACCKVK
Trigger: CTTAACCTTGCAGCATGCCAACTTTTGTTTCAAGCT...CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR TCA 72 bp ACAAAATCCCTTCTTGAGAATTCCCAGGTGAGATTCTaGGCTGCGAGAGCAGAACAAAGCTCACACGCAGAA +
Preference number: 3 (lower is better)
Translates to: TKSLLENSQVRF*AARAEQSSHAE
Trigger: TTCTGCGTGTGAGCTTTGTTCTGCTCTCGCAGCTCAGAATCTCACCTGGGAATTCTCAAGAAGGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR CAA 72 bp AAGCCAGCAGAGTATGTCAGACGCCTGGAGCTTGAGTaGCAGGCAGTTTTAAGCCACCTGACATTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KPAEYVRRLELE*QAVLSHLTLVL
Trigger: CAGCACCAATGTCAGGTGGCTTAAAACTGCCTGCAACTCAAGCTCCAGGCGTCTGACATACTCTGCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11
3UTR CAA 72 bp TCTACAACATTGCCCGCTGCTCTCTGCTTCTGTCTTTaGCTTGGACAGGCAAAGGAACGACTAAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: STTLPAALCFCL*LGQAKERLNSE
Trigger: TTCAGAATTTAGTCGTTCCTTTGCCTGTCCAAGCAAAAGACAGAAGCAGAGAGCAGCGGGCAATGTTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102742.11