Pregenerated sensors for BTD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021900Ensembl transcript IDs: ENSMUST00000090147.7
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGGATCTGTGGCCCTaGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGT | + |
|
Preference number: 1 (lower is better) Translates to: QCHKGGFPSTWDLWP*KGRSSPRAHPADHS Trigger: ACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTGCTGGGAAAGCCACCCTTGTGGCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR TCA 90 bp | CGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCACTaGCAGCAAGGCAGATGCAAGTCGGGCCTTTCTTCTATTTTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: RRSPVIPRPTHTPIH*QQGRCKSGLSSILK Trigger: CTTCAAAATAGAAGAAAGGCCCGACTTGCATCTGCCTTGCTGTCAGTGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR GCA 90 bp | GTGTGTTTCTTAGCACAGAAAGTGATCGGGCTTGGGGGATATCATTaGGGTGTCACTAGATCAACAGTGAAAGATACAAAACAAAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: VCFLAQKVIGLGGYH*GVTRSTVKDTKQRK Trigger: TTTTCTTTGTTTTGTATCTTTCACTGTTGATCTAGTGACACCGCAATGATATCCCCCAAGCCCGATCACTTTCTGTGCTAAGAAACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTCCTAGGACTGCATTTCTGACACCGCTGGTGGCTCGGGCATTGCCACCTTGGGATCTGTGGCCCTaGAAAGGCAGGTCGTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVPRTAFLTPLVARALPPWDLWP*KGRSSP Trigger: GGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCA...AGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCTAGGAACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCAGGCTTTCCCAGCACTTaGGATCTGTGGCCCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VPSSALPSYSEAHPHTHPGFPST*DLWPWK Trigger: TTTCCAGGGCCACAGATCCCAAGTGCTGGGAAAGCC...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCACATTGCCACCTCATCTaGAAGTTCCTGTTGGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VPSSALPSYSEAHPHTHPHCHLI*KFLLAR Trigger: TCTGGCCAACAGGAACTTCCAGATGAGGTGGCAATG...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CAA 90 bp | CACCGCTGGTGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTaGGCCAGAATAGGGACAGTCACCGAGCAGCCTTTTGTACAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HRWWLGHCHLIWKFL*ARIGTVTEQPFVQH Trigger: ATGCTGTACAAAAGGCTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CAA 90 bp | GCTGTTCCTAGGACTGCATTTCTGACACCGCTGGTGGCTCGGGCATaGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAATAGGGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: AVPRTAFLTPLVARA*PPHLEVPVGQNRDS Trigger: ACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCTAGGAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTCCTAGGACTGCATTTCTGACACCGCTGGTGGCTCGGGCATTGCCACCTTTGTACAGCATTGCTTaGAGAGTGTGTTTCTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AVPRTAFLTPLVARALPPLYSIA*RVCFLA Trigger: TGCTAAGAAACACACTCTCCAAGCAATGCTGTACAA...AGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCTAGGAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CCA 72 bp | AAGGGTGGCTTTCCCAGCACTTGGGATCTGTGGCCCTaGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGGFPSTWDLWP*KGRSSPRAHPA Trigger: AGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTGCTGGGAAAGCCACCCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CCA 72 bp | GGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTaGGATCTGTGGCCCTGGAAAGGCAGGTCGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSQCHKGGFPST*DLWPWKGRSSP Trigger: GGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CCA 72 bp | TGCCACAAGGGTGGCTTTCCCAGCACTTGGGATCTGTaGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CHKGGFPSTWDL*PWKGRSSPRAH Trigger: GTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTGCTGGGAAAGCCACCCTTGTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCAGCCTTTTGTACAGCATaGCTTGGAGAGTGTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VPSSALPSYSEAHPHTHPAFCTA*LGECVS Trigger: AGAAACACACTCTCCAAGCAATGCTGTACAAAAGGC...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR TCA 72 bp | TTCTATTTTGAAGAGCTGTTCCTAGGACTGCATTTCTaGCACCGCTGGTGGCTCGGGCATTGCCACCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: FYFEELFLGLHF*HRWWLGHCHLI Trigger: GATGAGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCTAGGAACAGCTCTTCAAAATAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CCA 72 bp | GGACAGTCACCGAGCAGCCTTTTGTACAGCATTGCTTaGAGAGTGTGTTTCTTAGCACAGAAAGTGATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQSPSSLLYSIA*RVCFLAQKVIG Trigger: CCCGATCACTTTCTGTGCTAAGAAACACACTCTCCAAGCAATGCTGTACAAAAGGCTGCTCGGTGACTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR TCA 72 bp | AGCAAGGCAGATGCAAGTCGGGCCTTTCTTCTATTTTaGAGAGCTGTTCCTAGGACTGCATTTCTGACACCG | + |
|
Preference number: 3 (lower is better) Translates to: SKADASRAFLLF*RAVPRTAFLTP Trigger: CGGTGTCAGAAATGCAGTCCTAGGAACAGCTCTTCAAAATAGAAGAAAGGCCCGACTTGCATCTGCCTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR GCA 72 bp | TTAGCACAGAAAGTGATCGGGCTTGGGGGATATCATTaGGGTGTCACTAGATCAACAGTGAAAGATACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAQKVIGLGGYH*GVTRSTVKDTK Trigger: TTTTGTATCTTTCACTGTTGATCTAGTGACACCGCAATGATATCCCCCAAGCCCGATCACTTTCTGTGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGAGCCCTCGGCCTCCGTaGTCTCCTGCCCGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLSPRPP*SPARRC Trigger: ACACCTGCGGGCAGGAGATCACGGAGGCCGAGGGCT...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGCCCAGTGAGGCCCTGTaGGTTTGTGGCTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLPSEAL*VCGYLG Trigger: GCCCAGGTAGCCACAAACCCACAGGGCCTCACTGGG...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAATAGGGACAGTCACCGAGCAGGCCTCGCGGTGCTCCTaGGAGGCCGAGCTGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIWKFLLARIGTVTEQASRCS*EAELTP Trigger: GGGCGTCAGCTCGGCCTCCCAGGAGCACCGCGAGGC...CTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGGATGCCAAGAGCGGTAGCTaGTTCATCCAGGCTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APQGGSQCHKGGFPSTWDAKSGS*FIQAVG Trigger: CCCCACAGCCTGGATGAACCAGCTACCGCTCTTGGC...ATCCCAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTGGCAACAGAGGCTGTTaGAGCACACCTGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WPWKGRSSPRAHPADHSFGNRGC*STPAGG Trigger: GCCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCC...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | CCATTTTCTTACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCGACACGGGTTCCACCTaGCCAGCTTGGGAGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSYGSPGWEPVPQGWLSDTGST*PAWETA Trigger: TGCCGTCTCCCAAGCTGGTCAGGTGGAACCCGTGTC...GGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTAAGAAAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTTTCTCCCAGCCAAGCTaGTCAGGGGTGTCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WPWKGRSSPRAHPADHSFFSQPS*SGVSRV Trigger: GACTCTGGACACCCCTGACCAGCTTGGCTGGGAGAA...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCCTAGGACTGCATTTCTGACACCGCTGGTGGCTCGGGCATTGCCACCTCGAGGTTCTGCTTCATaGGCTCCAGGGCCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPRTAFLTPLVARALPPRGSAS*APGPPG Trigger: GCCAGGAGGCCCTGGAGCTCATGAAGCAGAACCTCG...AGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCTAGGAACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGCACACCCTTCTGGGCTaGAGCCATCACTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLHTLLG*SHHLLF Trigger: GAACAGCAAGTGATGGCTGCAGCCCAGAAGGGTGTG...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | ACACCGCTGGTGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTTGGCCAGGGGTGTGTATGCCACTaGCGGTCATCCCCAGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPLVARALPPHLEVPVGQGCVCH*RSSPES Trigger: CGACTCTGGGGATGACCGGCAGTGGCATACACACCC...CTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGCCCAGAGTCGGGTGGTaGATGTTAGCTGCCAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLPRVGW*MLAAKT Trigger: CGTTTTGGCAGCTAACATCCACCACCCGACTCTGGG...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | ACACCGCTGGTGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTTGGCCAGGGACCTCCGTGTCATTaGACCGAAAGGGCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPLVARALPPHLEVPVGQGPPCH*TERAPD Trigger: GTCTGGAGCCCTTTCGGTTCAATGACACGGAGGTCC...CTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | CCATTTTCTTACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCTCACCTCAAAGTCTCTaGGGAGTCGGACGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSYGSPGWEPVPQGWLSSPQSL*GVGRQG Trigger: ACCCTGCCGTCCGACTCCTCAGAGACTTTGAGGTGA...GGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTAAGAAAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTCATTCACGTTCCACTTaGCGGCCTCATCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPWKGRSSPRAHPADHSFHSRST*RPHHSA Trigger: TGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATG...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGGATGTCAAAGCAAGTaGACACGCCAAACTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLGCQSK*TRQTCQ Trigger: CTGGCAAGTTTGGCGTGTTCACTTGCTTTGACATCC...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTTGGGCAATTATAAGGTaGCCTTTGGGGTCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WPWKGRSSPRAHPADHSFWAIIR*PLGSSM Trigger: CATGGACGACCCCAAAGGTCACCTTATAATTGCCCA...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGTCACAGTGCACTTCCTaGGCATCCTTCTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLSQCTS*ASFSQY Trigger: GTACTGTGAGAAGGATGCCCAGGAAGTGCACTGTGA...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGCTCTTTGGACAGGGTaGGCCTCTCATACAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLALWTG*ASHTVS Trigger: ACTTACTGTATGAGAGGCCCACCCTGTCCAAAGAGC...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | ACACCGCTGGTGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAGAACATCCCTCCCTTaGTGGCCATACAACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPLVARALPPHLEVPVGQRTSLP*WPYNSG Trigger: GCCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCT...CTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGAAGGCGGTGGCGAATaGTTTCTGAATTTCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLEGGGE*FLNFNG Trigger: GCCATTGAAATTCAGAAAGCATTCGCCACCGCCTTC...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | CTTACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTGTGGTGGATGTTAGCTaGCAAAACGTTGACACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTAPQGGSQCHKGGFPSTVVDVS*QNVDTE Trigger: TTCGGTGTCAACGTTTTGGCAGCTAACATCCACCAC...AGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | CACTTGGGATCTGTGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCGTAAAGTTGAATCCGTaGATACCATCTTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLGSVALERQVVPQSPPRVKLNP*IPSSGN Trigger: GTTCCCAGAAGATGGTATCCACGGATTCAACTTTAC...GCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCAGGTTCATCCAGGCTGTaGGGTACACAATGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSSALPSYSEAHPHTHPGSSRL*GTQCVS Trigger: TGAAACACATTGTGTACCCCACAGCCTGGATGAACC...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTGGGTCGTCCATGTCATaGTACCAAAAGGACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPWKGRSSPRAHPADHSFGSSMS*YQKDLR Trigger: TCTCAAGTCCTTTTGGTACCATGACATGGACGACCC...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | TGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAATAGGGACAGTCACCGAGCAGGCGGCCTCATCACAGTaGACTTCCTGGGCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIWKFLLARIGTVTEQAASSQ*TSWASF Trigger: GAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGC...CTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR GCA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCGCCTCCGTGATCTCCTaGCCGCAGGTGTCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPASVIS*PQVSKP Trigger: TGGCTTCGACACCTGCGGGCAGGAGATCACGGAGGC...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCAGTGGATACCATCTTCTaGGAACACTATAATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSSALPSYSEAHPHTHPVDTIF*EHYNLH Trigger: GTGCAGATTATAGTGTTCCCAGAAGATGGTATCCAC...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | CCATTTTCTTACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCGTTTCGTTCCAAGATTaGCCACCAAGAACATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSYGSPGWEPVPQGWLSVSFQD*PPRTSL Trigger: GAGGGATGTTCTTGGTGGCCAATCTTGGAACGAAAC...GGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTAAGAAAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CAA 72 bp | TGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTaGGCCAGAATAGGGACAGTCACCGAGCAGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLGHCHLIWKFL*ARIGTVTEQPF Trigger: AAAAGGCTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| 3UTR CAA 72 bp | AGGACTGCATTTCTGACACCGCTGGTGGCTCGGGCATaGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTAFLTPLVARA*PPHLEVPVGQN Trigger: ATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGTCAGAAATGCAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCTATTCCCTGTCCCAGTaGGGCCCTGTGGGTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPYSLSQ*GPVGLW Trigger: CCACAAACCCACAGGGCCTCACTGGGACAGGGAATA...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | TGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAATAGGGACAGTCACCGAGCAGAAGTTCCCCCACAGATaGAAGTCAAACAAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CHLIWKFLLARIGTVTEQKFPHR*KSNKPS Trigger: CGAGGGCTTGTTTGACTTTCATCTGTGGGGGAACTT...CTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCATACAACTCAGGCGCTaGAGGACCTCCGTGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPIQLRR*RTSVSL Trigger: CAATGACACGGAGGTCCTCCAGCGCCTGAGTTGTAT...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAATAGGGACAGTCACCGAGCAGCTTTCTGAATTTCAATaGCTGCCAAGAGCGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHLIWKFLLARIGTVTEQLSEFQ*LPRAVA Trigger: AGCTACCGCTCTTGGCAGCCATTGAAATTCAGAAAG...CTGCTCGGTGACTGTCCCTATTCTGGCCAACAGGAACTTCCAGATGAGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCGGGCATATAGCTCTTTaGACAGGGTGGGCCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPGHIAL*TGWASH Trigger: ATGAGAGGCCCACCCTGTCCAAAGAGCTATATGCCC...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CCA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCCTCTCATACAGTAAGTaGCAACAGAGGCTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPLSYSK*QQRLLE Trigger: CTCCAACAGCCTCTGTTGCCACTTACTGTATGAGAG...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR TCA 90 bp | AACCCAGCCAGTATTCTGCGGATTTGTAAAATAGCAACTGAGGTTTATTTTCTGGGTACCAAAAGGACTTaGGAGGGGTGTGTATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPASILRICKIATEVYFLGTKRT*EGCVCH Trigger: GTGGCATACACACCCCTCTCAAGTCCTTTTGGTACC...CAGAAAATAAACCTCAGTTGCTATTTTACAAATCCGCAGAATACTGGCTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | CACTTGGGATCTGTGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCGGCTGCAGCCATCACTaGCTGTTCATAGACGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLGSVALERQVVPQSPPRGCSHH*LFIDVE Trigger: CTCGACGTCTATGAACAGCAAGTGATGGCTGCAGCC...GCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | CATGAGCTCCAGGGCCTCCTGGCGGCTAACGAGCTCCAGGGGGTTTaGGCTCAGGACCGATGGATGCTCGTACACAGCAGCCACGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HELQGLLAANELQGV*AQDRWMLVHSSHVV Trigger: TACTACGTGGCTGCTGTGTACGAGCATCCATCGGTCCTGAGCCCAAACCCCCTGGAGCTCGTTAGCCGCCAGGAGGCCCTGGAGCTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | ACTTGGGATCTGTGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTACATTCACGTTCCACTaGGCGGCCTCATCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TWDLWPWKGRSSPRAHPATFTFH*AASSQC Trigger: GCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGT...AGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCACAGATCCCAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | CCATTTTCTTACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCTGGCAACAGAGGCTGTaGGAGCACACCTGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFSYGSPGWEPVPQGWLSWQQRL*EHTCRW Trigger: CCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCCA...GGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTAAGAAAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | CCGTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCTGGTACCAAAAGGACTaGAGAGGGGTGTGTATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLARRSPVIPRPTHTPIWYQKD*RGVCMP Trigger: TGGCATACACACCCCTCTCAAGTCCTTTTGGTACCA...GATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | TGGCCCTGGAAAGGCAGGTCGTCCCCCAGAGCCCACCCCGCTGACCACAGTTTTAACCAGGGCACAGGTTaGAATGTAGTAGGTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPWKGRSSPRAHPADHSFNQGTG*NVVGAV Trigger: CACGGCACCTACTACATTCAAACCTGTGCCCTGGTT...AAAACTGTGGTCAGCGGGGTGGGCTCTGGGGGACGACCTGCCTTTCCAGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 90 bp | AAGGTGGGCGGGACATTCACGTTCCACTTGGCGGCCTCATCACAGTaGACTTCCTGGGCATCCTTCTCACAGTACGGATCTCCGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGGTFTFHLAASSQ*TSWASFSQYGSPDR Trigger: CCTGTCCGGAGATCCGTACTGTGAGAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGTCCCGCCCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | GCCACCAAGAACATCCCTCCCTTGATGGCCATACAACTCAGGCGCTaGAGGACCTCCGTGTCATTGAACCGAAAGGGCTCCAGACACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATKNIPPLMAIQLRR*RTSVSLNRKGSRHG Trigger: CCCGTGTCTGGAGCCCTTTCGGTTCAATGACACGGAGGTCCTCCAGCGCCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTTGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 90 bp | GGCCTCTCATACAGTAAGTGGCAACAGAGGCTGTTGGAGCACACCTaGAGGTGGCCTTCCGTTCCCCAGACAGGGACCAGGGTGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSYSKWQQRLLEHT*RWPSVPQTGTRVKL Trigger: CAATTTCACCCTGGTCCCTGTCTGGGGAACGGAAGGCCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCCACTTACTGTATGAGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | GTCCCTAGCTCGGCGCTCCCCAGTTATTCCGAGGCCCACCCACACACCCATCCATGTTTCGTTCCAAGATaGGCCACCAAGAACATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPSSALPSYSEAHPHTHPCFVPR*ATKNIP Trigger: AGGGATGTTCTTGGTGGCCAATCTTGGAACGAAACA...TGGATGGGTGTGTGGGTGGGCCTCGGAATAACTGGGGAGCGCCGAGCTAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | GCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGGATGGGACCAGGGTGAAATaGTCATACATCATTTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: APQGGSQCHKGGFPSTWDGTRVK*SYIISE Trigger: CTCGGAAATGATGTATGACAATTTCACCCTGGTCCC...ATCCCAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | ACACCGCTGGTGGCTCGGGCATTGCCACCTCATCTGGAAGTTCCTGTTGGCCAGAAGAACATCCCTCCCTaGATGGCCATACAACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPLVARALPPHLEVPVGQKNIPP*MAIQLR Trigger: CCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTT...CTGGCCAACAGGAACTTCCAGATGAGGTGGCAATGCCCGAGCCACCAGCGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 90 bp | TATGCCACTGCCGGTCATCCCCAGAGTCGGGTGGTGGATGTTAGCTaGCAAAACGTTGACACCGAAGGCGGTGGCGAATGCTTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YATAGHPQSRVVDVS*QNVDTEGGGECFLN Trigger: ATTCAGAAAGCATTCGCCACCGCCTTCGGTGTCAACGTTTTGGCAGCTAACATCCACCACCCGACTCTGGGGATGACCGGCAGTGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | ACATCATTTCCGAGTGGAAGGTGGGCGGGACATTCACGTTCCACTTaGCGGCCTCATCACAGTGCACTTCCTGGGCATCCTTCTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSFPSGRWAGHSRST*RPHHSALPGHPSHS Trigger: ACTGTGAGAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGTCCCGCCCACCTTCCACTCGGAAATGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | GCACGGTGTGGAGTCCGTCAAAGACTCCCAGGGCATATAGCTCTTTaGACAGGGTGGGCCTCTCATACAGTAAGTGGCAACAGAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARCGVRQRLPGHIAL*TGWASHTVSGNRGC Trigger: ACAGCCTCTGTTGCCACTTACTGTATGAGAGGCCCACCCTGTCCAAAGAGCTATATGCCCTGGGAGTCTTTGACGGACTCCACACCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | CGGGTCCATCTCACTAGTTGTATTCCCTGTCCCAGTGAGGCCCTGTaGGTTTGTGGCTACCTGGGCAATTATAAGGTGACCTTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVHLTSCIPCPSEAL*VCGYLGNYKVTFGV Trigger: GACCCCAAAGGTCACCTTATAATTGCCCAGGTAGCCACAAACCCACAGGGCCTCACTGGGACAGGGAATACAACTAGTGAGATGGACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | TCATACAGTAAGTGGCAACAGAGGCTGTTGGAGCACACCTGCAGGTaGCCTTCCGTTCCCCAGACAGGGACCAGGGTGAAATTGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SYSKWQQRLLEHTCR*PSVPQTGTRVKLSY Trigger: GTATGACAATTTCACCCTGGTCCCTGTCTGGGGAACGGAAGGCCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCCACTTACTGTATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | GGAGTCCGTCAAAGACTCCCAGGGCATATAGCTCTTTGGACAGGGTaGGCCTCTCATACAGTAAGTGGCAACAGAGGCTGTTGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVRQRLPGHIALWTG*ASHTVSGNRGCWST Trigger: TGTGCTCCAACAGCCTCTGTTGCCACTTACTGTATGAGAGGCCCACCCTGTCCAAAGAGCTATATGCCCTGGGAGTCTTTGACGGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | TACGGCTCCCCAGGGTGGGAGCCAGTGCCACAAGGGTGGCTTTCCCAGCACTTGGATGTTCTTGTAAAGTaGAATCCGTGGATACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YGSPGWEPVPQGWLSQHLDVLVK*NPWIPS Trigger: AGATGGTATCCACGGATTCAACTTTACAAGAACATC...CAAGTGCTGGGAAAGCCACCCTTGTGGCACTGGCTCCCACCCTGGGGAGCCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | GGGACATTCACGTTCCACTTGGCGGCCTCATCACAGTGCACTTCCTaGGCATCCTTCTCACAGTACGGATCTCCGGACAGGATTTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTFTFHLAASSQCTS*ASFSQYGSPDRIFK Trigger: CTTAAAAATCCTGTCCGGAGATCCGTACTGTGAGAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 90 bp | TTAGCTGCCAAAACGTTGACACCGAAGGCGGTGGCGAATGCTTTCTaGATTTCAATGGCTGCCAAGAGCGGTAGCTGGTTCATCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAAKTLTPKAVANAF*ISMAAKSGSWFIQA Trigger: AGCCTGGATGAACCAGCTACCGCTCTTGGCAGCCATTGAAATTCAGAAAGCATTCGCCACCGCCTTCGGTGTCAACGTTTTGGCAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 90 bp | CCAGTGAGGCCCTGTGGGTTTGTGGCTACCTGGGCAATTATAAGGTaGCCTTTGGGGTCGTCCATGTCATGGTACCAAAAGGACTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVRPCGFVATWAIIR*PLGSSMSWYQKDLR Trigger: TCTCAAGTCCTTTTGGTACCATGACATGGACGACCCCAAAGGTCACCTTATAATTGCCCAGGTAGCCACAAACCCACAGGGCCTCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | TCGACAAGAGTTCCATTGTCGCTGAACACCACATTTGTGTTAAACTaGTATCTCCCGTCCTGTGGGCAACCAGGGTCGCTGCTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: STRVPLSLNTTFVLN*YLPSCGQPGSLLRQ Trigger: TTGCCTCAGCAGCGACCCTGGTTGCCCACAGGACGGGAGATACCAGTTTAACACAAATGTGGTGTTCAGCGACAATGGAACTCTTGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | CAGTCATTATGTAGAAAGGAAGGAACTGCCCCTCCCATTTTCTTACGGCTCCCCGTGAACACGCCAAACTaGCCAGCAAAGGGCGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: QSLCRKEGTAPPIFLRLPVNTPN*PAKGVS Trigger: TGATACGCCCTTTGCTGGCAAGTTTGGCGTGTTCAC...GGGGAGCCGTAAGAAAATGGGAGGGGCAGTTCCTTCCTTTCTACATAATGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 90 bp | TCATCCAGGCTGTGGGGTACACAATGTGTTTCACCTCAAAGTCTCTaGGGAGTCGGACGGCAGGGTCAAAGAATAGGATGTCAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRLWGTQCVSPQSL*GVGRQGQRIGCQSK Trigger: CTTGCTTTGACATCCTATTCTTTGACCCTGCCGTCCGACTCCTCAGAGACTTTGAGGTGAAACACATTGTGTACCCCACAGCCTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | TTCTCACAGTACGGATCTCCGGACAGGATTTTTAAGAACTTCCTATaGGACGGGTCCATCTCACTAGTTGTATTCCCTGTCCCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSQYGSPDRIFKNFL*DGSISLVVFPVPVR Trigger: CCTCACTGGGACAGGGAATACAACTAGTGAGATGGACCCGTCCCATAGGAAGTTCTTAAAAATCCTGTCCGGAGATCCGTACTGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 90 bp | GTAAATGGATGTTCTTGTAAAGTTGAATCCGTGGATACCATCTTCTaGGAACACTATAATCTGCACACCCTTCTGGGCTGCAGCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNGCSCKVESVDTIF*EHYNLHTLLGCSHH Trigger: GTGATGGCTGCAGCCCAGAAGGGTGTGCAGATTATAGTGTTCCCAGAAGATGGTATCCACGGATTCAACTTTACAAGAACATCCATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS-3UTR CAA 90 bp | AACCCAGCCAGTATTCTGCGGATTTGTAAAATAGCAACTGAGGTTTATTTTCTGTTCCACCTGACCAGCTaGGGAGACGGCATAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: NPASILRICKIATEVYFLFHLTS*GDGIKS Trigger: GGATTTTATGCCGTCTCCCAAGCTGGTCAGGTGGAA...CAGAAAATAAACCTCAGTTGCTATTTTACAAATCCGCAGAATACTGGCTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | CAGGGCCTCCTGGCGGCTAACGAGCTCCAGGGGGTTTaGGCTCAGGACCGATGGATGCTCGTACACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGLLAANELQGV*AQDRWMLVHSS Trigger: GCTGCTGTGTACGAGCATCCATCGGTCCTGAGCCCAAACCCCCTGGAGCTCGTTAGCCGCCAGGAGGCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 72 bp | GCCGGTCATCCCCAGAGTCGGGTGGTGGATGTTAGCTaGCAAAACGTTGACACCGAAGGCGGTGGCGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGHPQSRVVDVS*QNVDTEGGGEC Trigger: GCATTCGCCACCGCCTTCGGTGTCAACGTTTTGGCAGCTAACATCCACCACCCGACTCTGGGGATGACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 72 bp | GGTATCTCCCGTCCTGTGGGCAACCAGGGTCGCTGCTaGGGCAAGGCTGTTTCGTTCCAAGATTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GISRPVGNQGRC*GKAVSFQDWPP Trigger: TGGTGGCCAATCTTGGAACGAAACAGCCTTGCCTCAGCAGCGACCCTGGTTGCCCACAGGACGGGAGATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 72 bp | TACAGTAAGTGGCAACAGAGGCTGTTGGAGCACACCTaGAGGTGGCCTTCCGTTCCCCAGACAGGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YSKWQQRLLEHT*RWPSVPQTGTR Trigger: CCTGGTCCCTGTCTGGGGAACGGAAGGCCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCCACTTACTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 72 bp | GAAGCCAAGGCCCCCGCACTTAACCAGGGCACAGGTTaGAATGTAGTAGGTGCCGTGCACGGTGTGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EAKAPALNQGTG*NVVGAVHGVES Trigger: GGACTCCACACCGTGCACGGCACCTACTACATTCAAACCTGTGCCCTGGTTAAGTGCGGGGGCCTTGGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 90 bp | GCAGGTGTCGAAGCCAAGGCCCCCGCACTTAACCAGGGCACAGGTTaGAATGTAGTAGGTGCCGTGCACGGTGTGGAGTCCGTCAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AGVEAKAPALNQGTG*NVVGAVHGVESVKD Trigger: GTCTTTGACGGACTCCACACCGTGCACGGCACCTACTACATTCAAACCTGTGCCCTGGTTAAGTGCGGGGGCCTTGGCTTCGACACCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | TGTATGCCACTGCCGGTCATCCCCAGAGTCGGGTGGTaGATGTTAGCTGCCAAAACGTTGACACCGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CMPLPVIPRVGW*MLAAKTLTPKA Trigger: CGCCTTCGGTGTCAACGTTTTGGCAGCTAACATCCACCACCCGACTCTGGGGATGACCGGCAGTGGCATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | TGGGCCTCTCATACAGTAAGTGGCAACAGAGGCTGTTaGAGCACACCTGCAGGTGGCCTTCCGTTCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WASHTVSGNRGC*STPAGGLPFPR Trigger: TCTGGGGAACGGAAGGCCACCTGCAGGTGTGCTCCAACAGCCTCTGTTGCCACTTACTGTATGAGAGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 90 bp | GGGCAACCAGGGTCGCTGCTGAGGCAAGGCTGTTTCGTTCCAAGATaGGCCACCAAGAACATCCCTCCCTTGATGGCCATACAACTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQPGSLLRQGCFVPR*ATKNIPPLMAIQLR Trigger: CCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTTGGTGGCCAATCTTGGAACGAAACAGCCTTGCCTCAGCAGCGACCCTGGTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 72 bp | TCGTTCCAAGATTGGCCACCAAGAACATCCCTCCCTTaGTGGCCATACAACTCAGGCGCTGGAGGACCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SFQDWPPRTSLP*WPYNSGAGGPP Trigger: CGGAGGTCCTCCAGCGCCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTTGGTGGCCAATCTTGGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | AACATCCCTCCCTTGATGGCCATACAACTCAGGCGCTaGAGGACCTCCGTGTCATTGAACCGAAAGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NIPPLMAIQLRR*RTSVSLNRKGS Trigger: GGAGCCCTTTCGGTTCAATGACACGGAGGTCCTCCAGCGCCTGAGTTGTATGGCCATCAAGGGAGGGATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | GTGTGTATGCCACTGCCGGTCATCCCCAGAGTCGGGTaGTGGATGTTAGCTGCCAAAACGTTGACACCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VCMPLPVIPRVG*WMLAAKTLTPK Trigger: CTTCGGTGTCAACGTTTTGGCAGCTAACATCCACCACCCGACTCTGGGGATGACCGGCAGTGGCATACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 72 bp | TGGCCTTCCGTTCCCCAGACAGGGACCAGGGTGAAATaGTCATACATCATTTCCGAGTGGAAGGTGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WPSVPQTGTRVK*SYIISEWKVGG Trigger: CCCGCCCACCTTCCACTCGGAAATGATGTATGACAATTTCACCCTGGTCCCTGTCTGGGGAACGGAAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 90 bp | TACATCATTTCCGAGTGGAAGGTGGGCGGGACATTCACGTTCCACTaGGCGGCCTCATCACAGTGCACTTCCTGGGCATCCTTCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YIISEWKVGGTFTFH*AASSQCTSWASFSQ Trigger: CTGTGAGAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGTCCCGCCCACCTTCCACTCGGAAATGATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS GCA 72 bp | GGGACATTCACGTTCCACTTGGCGGCCTCATCACAGTaGACTTCCTGGGCATCCTTCTCACAGTACGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: GTFTFHLAASSQ*TSWASFSQYGS Trigger: AGATCCGTACTGTGAGAAGGATGCCCAGGAAGTGCACTGTGATGAGGCCGCCAAGTGGAACGTGAATGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 72 bp | TTCGTTCCAAGATTGGCCACCAAGAACATCCCTCCCTaGATGGCCATACAACTCAGGCGCTGGAGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FVPRLATKNIPP*MAIQLRRWRTS Trigger: GGAGGTCCTCCAGCGCCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTTGGTGGCCAATCTTGGAACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 72 bp | GGGTCGCTGCTGAGGCAAGGCTGTTTCGTTCCAAGATaGGCCACCAAGAACATCCCTCCCTTGATGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GSLLRQGCFVPR*ATKNIPPLMAI Trigger: TATGGCCATCAAGGGAGGGATGTTCTTGGTGGCCAATCTTGGAACGAAACAGCCTTGCCTCAGCAGCGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 90 bp | CAAGGCTGTTTCGTTCCAAGATTGGCCACCAAGAACATCCCTCCCTaGATGGCCATACAACTCAGGCGCTGGAGGACCTCCGTGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: QGCFVPRLATKNIPP*MAIQLRRWRTSVSL Trigger: CAATGACACGGAGGTCCTCCAGCGCCTGAGTTGTATGGCCATCAAGGGAGGGATGTTCTTGGTGGCCAATCTTGGAACGAAACAGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 90 bp | TGGGAACACTATAATCTGCACACCCTTCTGGGCTGCAGCCATCACTaGCTGTTCATAGACGTCGAGGTTCTGCTTCATGAGCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WEHYNLHTLLGCSHH*LFIDVEVLLHELQG Trigger: GCCCTGGAGCTCATGAAGCAGAACCTCGACGTCTATGAACAGCAAGTGATGGCTGCAGCCCAGAAGGGTGTGCAGATTATAGTGTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | CTCACTAGTTGTATTCCCTGTCCCAGTGAGGCCCTGTaGGTTTGTGGCTACCTGGGCAATTATAAGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: LTSCIPCPSEAL*VCGYLGNYKVT Trigger: GGTCACCTTATAATTGCCCAGGTAGCCACAAACCCACAGGGCCTCACTGGGACAGGGAATACAACTAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | CAAAGACTCCCAGGGCATATAGCTCTTTGGACAGGGTaGGCCTCTCATACAGTAAGTGGCAACAGAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QRLPGHIALWTG*ASHTVSGNRGC Trigger: ACAGCCTCTGTTGCCACTTACTGTATGAGAGGCCCACCCTGTCCAAAGAGCTATATGCCCTGGGAGTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 72 bp | AAAACGTTGACACCGAAGGCGGTGGCGAATGCTTTCTaGATTTCAATGGCTGCCAAGAGCGGTAGCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KTLTPKAVANAF*ISMAAKSGSWF Trigger: GAACCAGCTACCGCTCTTGGCAGCCATTGAAATTCAGAAAGCATTCGCCACCGCCTTCGGTGTCAACGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 72 bp | CCCTGTGGGTTTGTGGCTACCTGGGCAATTATAAGGTaGCCTTTGGGGTCGTCCATGTCATGGTACCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PCGFVATWAIIR*PLGSSMSWYQK Trigger: CTTTTGGTACCATGACATGGACGACCCCAAAGGTCACCTTATAATTGCCCAGGTAGCCACAAACCCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS TCA 72 bp | CTGTGGGGTACACAATGTGTTTCACCTCAAAGTCTCTaGGGAGTCGGACGGCAGGGTCAAAGAATAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: LWGTQCVSPQSL*GVGRQGQRIGC Trigger: ACATCCTATTCTTTGACCCTGCCGTCCGACTCCTCAGAGACTTTGAGGTGAAACACATTGTGTACCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CAA 72 bp | TATAATCTGCACACCCTTCTGGGCTGCAGCCATCACTaGCTGTTCATAGACGTCGAGGTTCTGCTTCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: YNLHTLLGCSHH*LFIDVEVLLHE Trigger: CTCATGAAGCAGAACCTCGACGTCTATGAACAGCAAGTGATGGCTGCAGCCCAGAAGGGTGTGCAGATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||
| CDS CCA 72 bp | TGTTCTTGTAAAGTTGAATCCGTGGATACCATCTTCTaGGAACACTATAATCTGCACACCCTTCTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSCKVESVDTIF*EHYNLHTLLGC Trigger: GCAGCCCAGAAGGGTGTGCAGATTATAGTGTTCCCAGAAGATGGTATCCACGGATTCAACTTTACAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090147.7 |
||