Pregenerated sensors for BTC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000082361Ensembl transcript IDs: ENSMUST00000121044.6, ENSMUST00000200860.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTaGTCTCTTGAATATCTTCACTTATGGGAGTTTTATCTTTATCCA | + |
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Preference number: 1 (lower is better) Translates to: SLPPACDNFITVKQY*SLEYLHLWEFYLYP Trigger: TGGATAAAGATAAAACTCCCATAAGTGAAGATATTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGAGATTTGCCTGCCTCTaGCTCCCAAGTCCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: ASASQVLGLKACTTIAWWRFACL*LPSPGI Trigger: AATCCCAGGACTTGGGAGGCAGAGGCAGGCAAATCT...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGTCACAGAGATTTGCCTaGCTCTGCCTCCCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASASQVLGLKACTTIAWWSQRFA*LCLPSP Trigger: AGGACTTGGGAGGCAGAGGCAGGCAAATCTCTGTGA...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGATTTGCCTGCCTCTaGCTCCCAAGTCCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: NIDCFGQSTRDQEAETLNRFACL*LPSPGI Trigger: AATCCCAGGACTTGGGAGGCAGAGGCAGGCAAATCT...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR GCA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACTCACAGAGATTTGCCTaGCTCTGCCTCCCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NIDCFGQSTRDQEAETLNSQRFA*LCLPSP Trigger: AGGACTTGGGAGGCAGAGGCAGGCAAATCTCTGTGA...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTAAAAGGACCACAAGAGTaGGAAAATGGGTCAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVKGPQE*ENGSIQ Trigger: CTGAATTGACCCATTTTCCCACTCTTGTGGTCCTTT...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CAA 90 bp | ATCCAAACAGGCAGCAAAGCAACATTGTCTGAAGACATCTTCCCATaGGCTGCTGTAAGTGACCTACCTAAGCAATGTGGACATTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: IQTGSKATLSEDIFP*AAVSDLPKQCGHFH Trigger: GTGGAAATGTCCACATTGCTTAGGTAGGTCACTTACAGCAGCCAATGGGAAGATGTCTTCAGACAATGTTGCTTTGCTGCCTGTTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGGTCTCTTGAATGTTTCCGAAGAGGATaGCAGCAGGTGCAGACGCCG | + |
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Preference number: 2 (lower is better) Translates to: LPPACDNFITVKQYWSLECFRRG*QQVQTP Trigger: CGGCGTCTGCACCTGCTGTCATCCTCTTCGGAAACA...TTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTATATTCTGTGTCAACATaGAAAATCGCCCTACCATCT | + |
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Preference number: 2 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVYSVST*KIALPS Trigger: AGATGGTAGGGCGATTTTCCATGTTGACACAGAATA...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CAA 90 bp | GAGACATGTCCTGTCCATCTGGGAATGAGTCAGGTCTTTTGTAGCTaGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGG | + |
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Preference number: 2 (lower is better) Translates to: ETCPVHLGMSQVFCS*PPACDNFITVKQYW Trigger: CCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAAGCTACAAAAGACCTGACTCATTCCCAGATGGACAGGACATGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGTGTCAACATGGAAAATCGCCCTACCATCTCAGAATCATAGCAAAGTGTCTTGGATTACGCTATTaGGTTAGATGTTGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: ILCQHGKSPYHLRIIAKCLGLRY*VRCWNS Trigger: TGAGTTCCAACATCTAACTCAATAGCGTAATCCAAG...ACACTTTGCTATGATTCTGAGATGGTAGGGCGATTTTCCATGTTGACACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGTGTCAACATGGAAAATCGCCCTACCATCTCAGAATCATAGCAAAGTGTGGTCCATATCAGTTCTaGCTCTCTCAATTCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: ILCQHGKSPYHLRIIAKCGPYQF*LSQFFY Trigger: ATAGAAGAATTGAGAGAGCCAGAACTGATATGGACC...ACACTTTGCTATGATTCTGAGATGGTAGGGCGATTTTCCATGTTGACACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGCAGGTCTTTTGTAGCTaGCCACCAGCTTGTGATAAC | + |
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Preference number: 3 (lower is better) Translates to: ASASQVLGLKACTTIAWWQVFCS*PPACDN Trigger: GTTATCACAAGCTGGTGGCAAGCTACAAAAGACCTG...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTAGGCAGCAAAGCAACATaGTCTGAAGACATCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVGSKAT*SEDIFP Trigger: TGGGAAGATGTCTTCAGACAATGTTGCTTTGCTGCC...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | CATGGAAAATCGCCCTACCATCTCAGAATCATAGCAAAGTGTGGTTCAGTTGGACAGGTCTTTTGTAGCTaGCCACCAGCTTGTGATAAC | + |
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Preference number: 3 (lower is better) Translates to: HGKSPYHLRIIAKCGSVGQVFCS*PPACDN Trigger: GTTATCACAAGCTGGTGGCAAGCTACAAAAGACCTG...TCCAACTGAACCACACTTTGCTATGATTCTGAGATGGTAGGGCGATTTTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACTTGACAGGGTTTTGCTaGCTTGTTTGGTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: NIDCFGQSTRDQEAETLNLTGFC*LVWLVG Trigger: ACCAACCAACCAAACAAGCAAGCAAAACCCTGTCAA...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTAAGGGAGTTCAGGCATTaGTTTGAATCTATGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVREFRH*FESMES Trigger: AGATTCCATAGATTCAAACAAATGCCTGAACTCCCT...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR GCA 72 bp | CTGTGCTGTTTATACTTTACTGAGGATCAATACCCATaGAAGGGCGAACGAAAACCCACCTTTCACTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: LCCLYFTEDQYP*KGERKPTFHFC Trigger: GCAAAAGTGAAAGGTGGGTTTTCGTTCGCCCTTGCATGGGTATTGATCCTCAGTAAAGTATAAACAGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | CATGGAAAATCGCCCTACCATCTCAGAATCATAGCAAAGTGTGGTTCAGTTGGAGGTTGGTTAGGTTTTTaGAGACAGTGTTCCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: HGKSPYHLRIIAKCGSVGGWLGF*RQCSSV Trigger: AACAGAGGAACACTGTCTCAAAAAACCTAACCAACC...TCCAACTGAACCACACTTTGCTATGATTCTGAGATGGTAGGGCGATTTTCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CCA 72 bp | TCAGTTCTAACCAGGACTCTGTATTCTGTGTCAACATaGAAAATCGCCCTACCATCTCAGAATCATAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SVLTRTLYSVST*KIALPSQNHSK Trigger: TTTGCTATGATTCTGAGATGGTAGGGCGATTTTCCATGTTGACACAGAATACAGAGTCCTGGTTAGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR TCA 72 bp | CACATGAGCCCAAGAAGACTAAATAAGACACGAATCTaGATCAAGTATGGGCAGCCGTTTTTCAAGAATGAA | + |
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Preference number: 3 (lower is better) Translates to: HMSPRRLNKTRI*IKYGQPFFKNE Trigger: TTCATTCTTGAAAAACGGCTGCCCATACTTGATTCAGATTCGTGTCTTATTTAGTCTTCTTGGGCTCATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CCA 72 bp | AAAATCGCCCTACCATCTCAGAATCATAGCAAAGTGTaGTTCAGTTGGAAATCTTGGATTACGCTATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: KIALPSQNHSKV*FSWKSWITLLS Trigger: ACTCAATAGCGTAATCCAAGATTTCCAACTGAACCACACTTTGCTATGATTCTGAGATGGTAGGGCGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | CTACTAAATACAGTATGTAGTCAAAGGACCACAAGAGTGGGAAAATGGGTCAATATTATTGACAGGGTTTaGCTTGCTTGTTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LLNTVCSQRTTRVGKWVNIIDRV*LACLVG Trigger: ACCAACCAAACAAGCAAGCAAAACCCTGTCAATAAT...ATTGACCCATTTTCCCACTCTTGTGGTCCTTTGACTACATACTGTATTTAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR TCA 72 bp | AGTTCACCTGAGAGCAAATATACATGCATTGGACTTTaGGGCTATAGTTGCATATGGTTACCACCAATACTA | + |
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Preference number: 3 (lower is better) Translates to: SSPESKYTCIGL*GYSCIWLPPIL Trigger: TAGTATTGGTGGTAACCATATGCAACTATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR TCA 72 bp | CAATTCAGGATGTTTTCTCTGGCATTAAAGTTCACCTaGGAGCAAATATACATGCATTGGACTTTGAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: QFRMFSLALKFT*EQIYMHWTLRL Trigger: TAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTTAATGCCAGAGAAAACATCCTGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTCACCTGAGAGCAAATATACATGCATTGGACTTTGAGGCTATAGTTGCAAAATGTCCCTTATTTTaGTCATCACCTAACCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: KVHLRANIHALDFEAIVAKCPLF*SSPNQV Trigger: AACCTGGTTAGGTGATGACAAAAATAAGGGACATTT...TGCAACTATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CCA 72 bp | AAGAACATAGGGAGTTCAGGCATTTGTTTGAATCTATaGAATCTCTCTTGTAAAGTAAAATGTACAAGGATC | + |
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Preference number: 3 (lower is better) Translates to: KNIGSSGICLNL*NLSCKVKCTRI Trigger: GATCCTTGTACATTTTACTTTACAAGAGAGATTCCATAGATTCAAACAAATGCCTGAACTCCCTATGTTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR TCA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTAGCAGCGGCAGGGAGCTaGCACTGCTACCCGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVAAAGS*HCYPGL Trigger: CAGCCCCGGGTAGCAGTGTCAGCTCCCTGCCGCTGC...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR TCA 90 bp | TTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGGTCTCTTGAAGCAGCGGCAGGGAGCTaGCACTGCTACCCGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPPACDNFITVKQYWSLEAAAGS*HCYPGL Trigger: CAGCCCCGGGTAGCAGTGTCAGCTCCCTGCCGCTGC...TTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| CDS-3UTR TCA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACTGTTTCCGAAGAGGATaGCAGCAGGTGCAGACGCCG | + |
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Preference number: 4 (lower is better) Translates to: NIDCFGQSTRDQEAETLNCFRRG*QQVQTP Trigger: CGGCGTCTGCACCTGCTGTCATCCTCTTCGGAAACA...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR GCA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACATGCAGGAGGGAGTTTaGTCGTCCACCACGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: NIDCFGQSTRDQEAETLNMQEGV*SSTTKR Trigger: CCGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCAT...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CCA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGCACAAAGAGAGCCATTaGTTTCTGGTGTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ASASQVLGLKACTTIAWWHKESH*FLVFWL Trigger: CAACCAGAACACCAGAAACCAATGGCTCTCTTTGTG...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS-3UTR GCA 90 bp | GGCATTAAAGTTCACCTGAGAGCAAATATACATGCATTGGACTTTGAGGCTATACAGACCACCAGGATCTaGCCCCGGTCCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GIKVHLRANIHALDFEAIQTTRI*PRSCWR Trigger: CCTCCAGCAGGACCGGGGGCAGATCCTGGTGGTCTG...TATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTTAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR GCA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACCACACAGTGGAGAATTaGAAGACCCAGGGCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: NIDCFGQSTRDQEAETLNHTVEN*KTQGKD Trigger: GTCCTTGCCCTGGGTCTTGCAATTCTCCACTGTGTG...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CAA 72 bp | GGCAGCAAAGCAACATTGTCTGAAGACATCTTCCCATaGGCTGCTGTAAGTGACCTACCTAAGCAATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GSKATLSEDIFP*AAVSDLPKQCG Trigger: TCCACATTGCTTAGGTAGGTCACTTACAGCAGCCAATGGGAAGATGTCTTCAGACAATGTTGCTTTGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| 3UTR CAA 72 bp | CCTGTCCATCTGGGAATGAGTCAGGTCTTTTGTAGCTaGCCACCAGCTTGTGATAACTTTATAACCGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: PVHLGMSQVFCS*PPACDNFITVK Trigger: CTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAAGCTACAAAAGACCTGACTCATTCCCAGATGGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| CDS-3UTR GCA 90 bp | TTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGGTCTCTTGAACACACAGTGGAGAATTaGAAGACCCAGGGCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPPACDNFITVKQYWSLEHTVEN*KTQGKD Trigger: GTCCTTGCCCTGGGTCTTGCAATTCTCCACTGTGTG...TTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| CDS-3UTR GCA 90 bp | TTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGGTCTCTTGAACCTTTCTCACAGCTGTaGAGTTTTCCCCAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPPACDNFITVKQYWSLEPFSQL*SFPQEL Trigger: GAGCTCCTGGGGAAAACTGCACAGCTGTGAGAAAGG...TTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTCACCTGAGAGCAAATATACATGCATTGGACTTTGAGGCTATAGTTGCAGGCATCTCCCATGGATaGAGTAATGCTTGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: KVHLRANIHALDFEAIVAGISHG*SNACTA Trigger: AGCAGTACAAGCATTACTGCATCCATGGGAGATGCC...TGCAACTATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CCA 90 bp | GGCATTAAAGTTCACCTGAGAGCAAATATACATGCATTGGACTTTGAGGCTATAGGGCACCGAGAGAAGTaGGTTTTCACTTTCTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: GIKVHLRANIHALDFEAIGHREK*VFTFCL Trigger: TAGACAGAAAGTGAAAACCCACTTCTCTCGGTGCCC...TATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTTAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CCA 90 bp | GGCATTAAAGTTCACCTGAGAGCAAATATACATGCATTGGACTTTGAGGCTATATGGTTTCTGGTGTTCTaGTTGTGTTCCCATCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: GIKVHLRANIHALDFEAIWFLVF*LCSHLL Trigger: TAGCAGATGGGAACACAACCAGAACACCAGAAACCA...TATAGCCTCAAAGTCCAATGCATGTATATTTGCTCTCAGGTGAACTTTAATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CCA 90 bp | CTACTAAATACAGTATGTAGTCAAAGGACCACAAGAGTGGGAAAATGGGTCAATCACAAAGAGAGCCATTaGTTTCTGGTGTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLNTVCSQRTTRVGKWVNHKESH*FLVFWL Trigger: CAACCAGAACACCAGAAACCAATGGCTCTCTTTGTG...ATTGACCCATTTTCCCACTCTTGTGGTCCTTTGACTACATACTGTATTTAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CCA 90 bp | TTGCCACCAGCTTGTGATAACTTTATAACCGTTAAGCAATATTGGTCTCTTGAATGGTTTCTGGTGTTCTaGTTGTGTTCCCATCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LPPACDNFITVKQYWSLEWFLVF*LCSHLL Trigger: TAGCAGATGGGAACACAACCAGAACACCAGAAACCA...TTCAAGAGACCAATATTGCTTAACGGTTATAAAGTTATCACAAGCTGGTGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200860.2 |
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| 3UTR CAA 72 bp | CTTAGACTTAGTGGAATTGGCAGGAGATCTTCATTATaGAAGCTCCAGCCTACTTATAAACACTGTGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LRLSGIGRRSSL*KLQPTYKHCAR Trigger: TCTAGCACAGTGTTTATAAGTAGGCTGGAGCTTCAATAATGAAGATCTCCTGCCAATTCCACTAAGTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS GCA 90 bp | GGTCCACTCGCTCACACCGAGCCCCAAAGTAGCCTTTCTCACAGATaGAGGAGGGAGTTTGCTCGTCCACCACGAAGCGGCATCTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: GPLAHTEPQSSLSHR*RREFARPPRSGISH Trigger: ATGGGAGATGCCGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCATCTGTGAGAAAGGCTACTTTGGGGCTCGGTGTGAGCGAGTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGGATGCAGGAGGGAGTTaGCTCGTCCACCACGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: ASASQVLGLKACTTIAWWDAGGS*LVHHEA Trigger: CGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCATC...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS GCA 90 bp | AGGAGGGAGTTTGCTCGTCCACCACGAAGCGGCATCTCCCATGGATaGAGTAATGCTTGTACTGCTTGGGGCACCGAGAGAAGTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RREFARPPRSGISHG*SNACTAWGTERSGF Trigger: AAACCCACTTCTCTCGGTGCCCCAAGCAGTACAAGCATTACTGCATCCATGGGAGATGCCGCTTCGTGGTGGACGAGCAAACTCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGCCACACAGTGGAGAATaGCAAGACCCAGGGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: ASASQVLGLKACTTIAWWPHSGE*QDPGQG Trigger: TCCTTGCCCTGGGTCTTGCAATTCTCCACTGTGTGG...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGTTTCTGGTGTTCTGGTaGTGTTCCCATCTGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: ASASQVLGLKACTTIAWWFLVFW*CSHLLP Trigger: TGGTAGCAGATGGGAACACAACCAGAACACCAGAAA...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTACTACCATTGCGTGGTGGCCACAAAGAGAGCCATaGGTTTCTGGTGTTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: ASASQVLGLKACTTIAWWPQREP*VSGVLV Trigger: AACCAGAACACCAGAAACCAATGGCTCTCTTTGTGG...CCACCACGCAATGGTAGTACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS GCA 90 bp | ACAAAGAGAGCCATTGGTTTCTGGTGTTCTGGTTGTGTTCCCATCTaGTACCACACAGTGGAGAATTGCAAGACCCAGGGCAAGGACCAG | + |
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Preference number: 5 (lower is better) Translates to: TKRAIGFWCSGCVPI*YHTVENCKTQGKDQ Trigger: CTGGTCCTTGCCCTGGGTCTTGCAATTCTCCACTGTGTGGTAGCAGATGGGAACACAACCAGAACACCAGAAACCAATGGCTCTCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGTACTGGTGGTACCACAAAGAGAGCCATaGGTTTCTGGTGTTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LVSQPGTRKQRHLTVLVVPQREP*VSGVLV Trigger: AACCAGAACACCAGAAACCAATGGCTCTCTTTGTGG...TACCACCAGTACTGTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CAA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACTTTCTGGTGTTCTGGTaGTGTTCCCATCTGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: NIDCFGQSTRDQEAETLNFLVFW*CSHLLP Trigger: TGGTAGCAGATGGGAACACAACCAGAACACCAGAAA...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS-3UTR CAA 90 bp | AATATTGACTGCTTTGGTCAGTCAACCAGGGACCAGGAAGCAGAGACACTTAACAGCAATATTGGTCTCTaGAATATCTTCACTTATGGG | + |
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Preference number: 5 (lower is better) Translates to: NIDCFGQSTRDQEAETLNSNIGL*NIFTYG Trigger: CCCATAAGTGAAGATATTCAAGAGACCAATATTGCT...GTTAAGTGTCTCTGCTTCCTGGTCCCTGGTTGACTGACCAAAGCAGTCAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS GCA 72 bp | GCTCACACCGAGCCCCAAAGTAGCCTTTCTCACAGATaGAGGAGGGAGTTTGCTCGTCCACCACGAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AHTEPQSSLSHR*RREFARPPRSG Trigger: GCCGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCATCTGTGAGAAAGGCTACTTTGGGGCTCGGTGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS CAA 90 bp | ACACCGAGCCCCAAAGTAGCCTTTCTCACAGATGCAGGAGGGAGTTaGCTCGTCCACCACGAAGCGGCATCTCCCATGGATGCAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: TPSPKVAFLTDAGGS*LVHHEAASPMDAVM Trigger: CATTACTGCATCCATGGGAGATGCCGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCATCTGTGAGAAAGGCTACTTTGGGGCTCGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS GCA 72 bp | TTTGCTCGTCCACCACGAAGCGGCATCTCCCATGGATaGAGTAATGCTTGTACTGCTTGGGGCACCGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FARPPRSGISHG*SNACTAWGTER Trigger: TCTCTCGGTGCCCCAAGCAGTACAAGCATTACTGCATCCATGGGAGATGCCGCTTCGTGGTGGACGAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS CCA 72 bp | GGTGTTCTGGTTGTGTTCCCATCTGCTACCACACAGTaGAGAATTGCAAGACCCAGGGCAAGGACCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GVLVVFPSATTQ*RIARPRARTRS Trigger: GCTCCTGGTCCTTGCCCTGGGTCTTGCAATTCTCCACTGTGTGGTAGCAGATGGGAACACAACCAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS CAA 72 bp | CCCAAAGTAGCCTTTCTCACAGATGCAGGAGGGAGTTaGCTCGTCCACCACGAAGCGGCATCTCCCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: PKVAFLTDAGGS*LVHHEAASPMD Trigger: ATCCATGGGAGATGCCGCTTCGTGGTGGACGAGCAAACTCCCTCCTGCATCTGTGAGAAAGGCTACTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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| CDS GCA 72 bp | GCCATTGGTTTCTGGTGTTCTGGTTGTGTTCCCATCTaGTACCACACAGTGGAGAATTGCAAGACCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AIGFWCSGCVPI*YHTVENCKTQG Trigger: GCCCTGGGTCTTGCAATTCTCCACTGTGTGGTAGCAGATGGGAACACAACCAGAACACCAGAAACCAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121044.6 ENSMUST00000200860.2 |
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| CDS CCA 72 bp | GGCATCTCCCATGGATGCAGTAATGCTTGTACTGCTTaGGGCACCGAGAGAAGTGGGTTTTCACTTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GISHGCSNACTA*GTERSGFSLSV Trigger: GACAGAAAGTGAAAACCCACTTCTCTCGGTGCCCCAAGCAGTACAAGCATTACTGCATCCATGGGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121044.6 |
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