Pregenerated sensors for BTBD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111375Ensembl transcript IDs: ENSMUST00000060553.8, ENSMUST00000094541.4, ENSMUST00000100951.9, ENSMUST00000152474.8, ENSMUST00000162298.4, ENSMUST00000211896.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CACTATGCATGTGTGCACCAGGAACTGACTGTGTCCTCCCCAGATCAGACGCTGAGAACCGGTGTGTGGTaGTGCAGTCTCTCGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HYACVHQELTVSSPDQTLRTGVW*CSLSAL Trigger: CAGAGCCGAGAGACTGCAGCACCACACACCGGTTCT...CAGCGTCTGATCTGGGGAGGACACAGTCAGTTCCTGGTGCACACATGCATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCAGCCCCCTCACGCTGTATTTCAACAGTGGTAACATAGGTCACCAGCAGGTGAGAACCGGTGTGTaGTGCTGCAGTCTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSSPLTLYFNSGNIGHQQVRTGV*CCSLSA Trigger: AGCCGAGAGACTGCAGCACCACACACCGGTTCTCAC...CTGCTGGTGACCTATGTTACCACTGTTGAAATACAGCGTGAGGGGGCTGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR-3UTR CCA 90 bp | CAGATCCCCATAGCTGGAGTTGCAGGCATCTGTAAGCTGTCCAAACATCTGGGAAAATTAAGCAGAGGCTaGAGCCTGGATAGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: QIPIAGVAGICKLSKHLGKLSRG*SLDRTE Trigger: CTCTGTCCTATCCAGGCTCCAGCCTCTGCTTAATTT...TCCCAGATGTTTGGACAGCTTACAGATGCCTGCAACTCCAGCTATGGGGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR-3UTR CCA 90 bp | TCACCAGCAGGTATGCCTTTTAACTCCTCTTACCCACAGGATAATGAAGCTTTAGCAGAGGCTGGAGCCTaGATAGGACAGAGTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SPAGMPFNSSYPQDNEALAEAGA*IGQSSV Trigger: AACACTACTCTGTCCTATCCAGGCTCCAGCCTCTGC...TAAAGCTTCATTATCCTGTGGGTAAGAGGAGTTAAAAGGCATACCTGCTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR-3UTR CCA 90 bp | TCACCAGCAGGTATGCCTTTTAACTCCTCTTACCCACAGGATAATGAAGCTTTACAGAGAGGAGGCCACTaGAAAGAGATAAGCTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPAGMPFNSSYPQDNEALQRGGH*KEISLN Trigger: ATTTAAGCTTATCTCTTTCCAGTGGCCTCCTCTCTG...TAAAGCTTCATTATCCTGTGGGTAAGAGGAGTTAAAAGGCATACCTGCTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCATCAGTAATATTACTATaGTTATTGCACGGCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPSVILL*LLHGPL Trigger: AAGAGGGCCGTGCAATAACCATAGTAATATTACTGA...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| 3UTR TCA 72 bp | AAGGAAGCCTTGATGATCTCTCAGCCTTCACAAGTGTaGGAACCGGTGTGTGGTGCTGCAGTCTCTCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: KEALMISQPSQV*EPVCGAAVSRL Trigger: GAGCCGAGAGACTGCAGCACCACACACCGGTTCTCACACTTGTGAAGGCTGAGAGATCATCAAGGCTTCCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| 3UTR GCA 72 bp | TATTTCAACAGTGGTAACATAGGTCACCAGCAGGTATaGCTTTTAACTCCTCTTACCCACAGGATAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: YFNSGNIGHQQV*LLTPLTHRIMK Trigger: CTTCATTATCCTGTGGGTAAGAGGAGTTAAAAGGCATACCTGCTGGTGACCTATGTTACCACTGTTGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR GCA 90 bp | CACTATGCATGTGTGCACCAGGAACTGACTGTGTCCTCCCCAGATCAGACGCTGAGCCCCTTCCTGCCATaGCCCGGGGAACTCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HYACVHQELTVSSPDQTLSPFLP*PGELRR Trigger: CCTTCTGAGTTCCCCGGGGCATGGCAGGAAGGGGCT...CAGCGTCTGATCTGGGGAGGACACAGTCAGTTCCTGGTGCACACATGCATAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTGAGCTTGAGCCAGGGTaGGAGGGGCGCTCTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCELEPG*EGRSSS Trigger: GGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCTC...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | CACTATGCATGTGTGCACCAGGAACTGACTGTGTCCTCCCCAGATCAGACGCTGAGAATGGTGTCTGTGTaGATTTCCTCCCTTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: HYACVHQELTVSSPDQTLRMVSV*ISSLKS Trigger: GCTTTTAAGGGAGGAAATCCACACAGACACCATTCT...CAGCGTCTGATCTGGGGAGGACACAGTCAGTTCCTGGTGCACACATGCATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR TCA 90 bp | ATGTGTGCACCAGGAACTGACTGTGTCCTCCCCAGATCAGACGCTGAAGCTCCATTGATGTGTGTTCAATaGTATGGGAATGAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: MCAPGTDCVLPRSDAEAPLMCVQ*YGNESQ Trigger: CTGGCTTTCATTCCCATATCATTGAACACACATCAA...TGGAGCTTCAGCGTCTGATCTGGGGAGGACACAGTCAGTTCCTGGTGCACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR CCA 90 bp | AAGCTGTCCAAACATCTGGGAACTCTCATAGGGTCCTGTGGAGAGCAAGAAGGTAGAGTAATACACTCTTaGGAGCTTTCAGCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KLSKHLGTLIGSCGEQEGRVIHS*ELSAQQ Trigger: CTGCTGGGCTGAAAGCTCCCAAGAGTGTATTACTCT...ACCTTCTTGCTCTCCACAGGACCCTATGAGAGTTCCCAGATGTTTGGACAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCATTCACTTGCCCTTCCTaGGGCAGCCCCTGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPFTCPS*GSPWLG Trigger: TCCCAGCCAGGGGCTGCCTCAGGAAGGGCAAGTGAA...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTGAGGCAGCCCCTGGCTaGGACAGGAGTCCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCEAAPG*DRSPEI Trigger: AATCTCTGGACTCCTGTCCCAGCCAGGGGCTGCCTC...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGTGGCTGAGCTGCTGTaGATCCATTGCTGCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPVAELL*IHCCSL Trigger: GAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCAC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGACCTTGTCTCCTTTGCTaGGAGCTGGTGAGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRPCLLC*ELVSTG Trigger: GCCTGTGCTCACCAGCTCTCAGCAAAGGAGACAAGG...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTGAGTACCTTAGGTCTTaGCCCTGTGGTCTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCEYLRS*PCGLHF Trigger: GAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTC...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACGCTGTATTTCAACAGTGGTAACATAGGTCACCAGCAGGTATGCCTTTTAACTAACAAGACTGCCTTGTaGACTTTGAACAGCGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TLYFNSGNIGHQQVCLLTNKTAL*TLNSEP Trigger: TGGCTCGCTGTTCAAAGTGCACAAGGCAGTCTTGTT...AGTTAAAAGGCATACCTGCTGGTGACCTATGTTACCACTGTTGAAATACAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTTCCTTTTCCATGTACTaGGTCCTTCCGTCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCSFSMY*VLPSSC Trigger: GCAGCTGGACGGAAGGACCCAGTACATGGAAAAGGA...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCAGAGGCGGGGCATGTaGAATCTTTTCCTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCQRRGM*NLFLSV Trigger: CACTGAGAGGAAAAGATTCCACATGCCCCGCCTCTG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGACATCCACAGAGCCCATaGAAGCCAGAAGCTCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRHPQSP*KPEAPC Trigger: GCACGGAGCTTCTGGCTTCCATGGGCTCTGTGGATG...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGCTGTCCAAACATCTGGGAACTCTCATAGGGTCCTGTGGAGAGCAAGAAACCAGTAATATCCTCTaGAATTTCACCTTTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: CKLSKHLGTLIGSCGEQETSNIL*NFTFPK Trigger: CTTGGGAAAGGTGAAATTCCAGAGGATATTACTGGT...TTCTTGCTCTCCACAGGACCCTATGAGAGTTCCCAGATGTTTGGACAGCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR GCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAGGCTTGGCTCTGGCTTaGACGTTCAGGTTTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRGLALA*TFRFAV Trigger: CACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCC...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGCTTCCTGCCAAGTCTaGGGTCATCACCTTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPASCQV*GHHLCQ Trigger: TTGACAAAGGTGATGACCGCAGACTTGGCAGGAAGC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCACTGCTGTGCATCCATTaGTGCTCCCTCTTTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPLLCIH*CSLFSS Trigger: CGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAG...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTGTGGTCTCCACTTCTTaGTTCTGGACTCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCVVSTS*FWTPFP Trigger: TGGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCAC...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGCTCACCATCTGTCCTaGGGAATCACTAACGTATGG | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPAHHLS*GITNVW Trigger: CCATACGTTAGTGATTCCCCAGGACAGATGGTGAGC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGACTGTGCATCCATTGCTaGTCCCTCTTTTCTTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRLCIHC*SLFSSQ Trigger: CTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAG...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAGTGTTTGCAAAGGCTTaGCTCTGGCTTGCACGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRVFAKA*LWLARS Trigger: TGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACAC...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCATCGGATCTCATCTTCTaGTTAGTAGAGAGAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPSDLIF*LVEREV Trigger: GACCTCTCTCTCTACTAATCAGAAGATGAGATCCGA...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCTTCTGTACATTACCTaGGAACACAGCGTTATTAGC | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCLLYIT*EHSVIS Trigger: GCTAATAACGCTGTGTTCTCAGGTAATGTACAGAAG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | TCACCAGCAGGTATGCCTTTTAACTCCTCTTACCCACAGGATAATGAAGCTTTAAAATGCTTTAAATTCTaGAGCTTCAACACCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPAGMPFNSSYPQDNEALKCFKF*SFNTIH Trigger: GTGGATGGTGTTGAAGCTTCAGAATTTAAAGCATTT...TAAAGCTTCATTATCCTGTGGGTAAGAGGAGTTAAAAGGCATACCTGCTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS-3UTR GCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGATTGACATTACTCCATTaGTCACCATCTGTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRLTLLH*SPSVLG Trigger: CCCCAGGACAGATGGTGAGCAATGGAGTAATGTCAA...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAACACTTGTCTTCTACTaGTCCGTTTTCCTTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPTLVFY*SVFLCL Trigger: GAGACAAAGGAAAACGGATCAGTAGAAGACAAGTGT...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGTCTTCCCACAACAGTaGATGACAAACCTTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPVFPQQ*MTNLLS Trigger: AGATAGAAGGTTTGTCATCCACTGTTGTGGGAAGAC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCCTTCTATCTTTGTATaGTCACTGTTTTCTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCPSIFV*SLFSVW Trigger: CCAAACAGAAAACAGTGATCATACAAAGATAGAAGG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR TCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGTCCAGAGATTTCACTaGGCTGATCTTTGGTATATT | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPVQRFH*ADLWYI Trigger: AATATACCAAAGATCAGCTCAGTGAAATCTCTGGAC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCATCCATTGGTAATTCTTaGAACTGCTCGAGACTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPSIGNS*NCSRLY Trigger: GTAAAGTCTCGAGCAGTTGCAAGAATTACCAATGGA...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR GCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCTCTTTTTATTACACTaGTATTCCCGTGAGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCLFLLH*YSRESL Trigger: AAGACTCTCACGGGAATAGCAGTGTAATAAAAAGAG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAGTGGGACATCTAACCTaGTCTTTTGATCTTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRVGHLT*SFDLEL Trigger: AAGCTCAAGATCAAAAGACCAGGTTAGATGTCCCAC...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| 3UTR CAA 72 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATaGCACGGCCCTCTTAGATCTACACTAGCAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWL*HGPLRSTLASP Trigger: TGGACTTGCTAGTGTAGATCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTTCTCTTTCACAACTTTaGACATTTTTGTACTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCSLSQL*TFLYCH Trigger: GTGACAGTACAAAAATGTCCAAAGTTGTGAAAGAGA...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CCA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGATCACTGTTTTCTGTTTaGGGCTTTACCATAGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: NSLLLSVILLWLLHGPLRSLFSV*GFTIVL Trigger: TAAAACTATGGTAAAGCCCCAAACAGAAAACAGTGA...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS GCA 90 bp | GAGCCAGGGTGGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTGCTGTaGATCCATTGCTGCTCCCTCTTTTCTTCGCAGCTGTCTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: EPGWEGRSSSVAELL*IHCCSLFSSQLSVV Trigger: CACCACAGACAGCTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | AGCTTGAGCCAGGGTGGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTaGTGTGCATCCATTGCTGCTCCCTCTTTTCTTCGCAGCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SLSQGGRGALRPWLS*CASIAAPSFLRSCL Trigger: CAGACAGCTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | CACCCTCGTGCACCTTCAACTCTTCAGGGGTGCTGGTGTCGCTGCTaGTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGCTGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPRAPSTLQGCWCRC*SSQGSHGTALCCTW Trigger: CCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCACCCCTGAAGAGTTGAAGGTGCACGAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | GGTCACCCTCGTGCACCTTCAACTCTTCAGGGGTGCTGGTGTCGCTaGTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GHPRAPSTLQGCWCR*CSSQGSHGTALCCT Trigger: AGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCACCCCTGAAGAGTTGAAGGTGCACGAGGGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | GGATCCTTGAGCTTGAGCCAGGGTGGGAGGGGCGCTCTTCGTCCGTaGCTGAGCTGCTGTGCATCCATTGCTGCTCCCTCTTTTCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLSLSQGGRGALRP*LSCCASIAAPSFLR Trigger: GCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCTCAAGGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TGGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTGCTGTGCATCCATTaGTGCTCCCTCTTTTCTTCGCAGCTGTCTGTGGTGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WEGRSSSVAELLCIH*CSLFSSQLSVVLKH Trigger: GTGCTTCAGCACCACAGACAGCTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TGCTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGCTGCACTTaGAGATGCCTCTGTCGTGTGAGCCCTCATCATCCTGAGACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCSSQGSHGTALCCT*RCLCRVSPHHPETP Trigger: GGGGGTCTCAGGATGATGAGGGCTCACACGACAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TGTCGCTGCTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGCTaGACTTGGAGATGCCTCTGTCGTGTGAGCCCTCATCATCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRCCSSQGSHGTALC*TWRCLCRVSPHHPE Trigger: CTCAGGATGATGAGGGCTCACACGACAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TGGTGTCGCTGCTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTaGTGCACTTGGAGATGCCTCTGTCGTGTGAGCCCTCATCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: WCRCCSSQGSHGTAL*CTWRCLCRVSPHHP Trigger: AGGATGATGAGGGCTCACACGACAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TTGATCTTGAGCTTGAGCCAGGGTGGGAGGGGCGCTCTTCGTCCGTaGCTGAGCTGCTGTGCATCCATTGCTGCTCCCTCTTTTCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LILSLSQGGRGALRP*LSCCASIAAPSFLR Trigger: GCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCTCAAGATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS GCA 90 bp | ATCTCGTCATCACTTGCCGAGTGGATCTGGTGGTCACCCCCACCCTaGTTTCTCACTCTGACTTCAGTCCTGAGGTCACCCTCGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ISSSLAEWIWWSPPP*FLTLTSVLRSPSCT Trigger: GGTGCACGAGGGTGACCTCAGGACTGAAGTCAGAGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | GTGGGACATCTAACCTGGTCTTTTGATCTTGAGCTTGAGCCAGGGTaGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTGCTGTGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGHLTWSFDLELEPG*EGRSSSVAELLCIH Trigger: ATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCTCAAGATCAAAAGACCAGGTTAGATGTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS GCA 90 bp | GAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTGCTTTGCAAAGTGCTaGTCGTCTTCAGAGCCCCTGTCTGCGACATGGGTTTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESSCLSSVQSCFAKC*SSSEPLSATWVSDS Trigger: GGAGTCAGAAACCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TCAGAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTGCTTTGCAAAGTaGTGCTCGTCTTCAGAGCCCCTGTCTGCGACATGGGTTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SESSCLSSVQSCFAK*CSSSEPLSATWVSD Trigger: GTCAGAAACCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TCTGGCTTCTTCCTAGGGATCTCGTCATCACTTGCCGAGTGGATCTaGTGGTCACCCCCACCCTGCTTTCTCACTCTGACTTCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGFFLGISSSLAEWI*WSPPPCFLTLTSVL Trigger: CAGGACTGAAGTCAGAGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | TCATCTTCTGTTTCATCTGCTGAAGAAGAAACCTGGTCCCCTTCCTaGGCAGATGGGATGCTACCCCGTGGCGTACTTCCCTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSVSSAEEETWSPS*ADGMLPRGVLPFSR Trigger: CCGGGAGAAGGGAAGTACGCCACGGGGTAGCATCCCATCTGCTCAGGAAGGGGACCAGGTTTCTTCTTCAGCAGATGAAACAGAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | GGCCCTACAGAGGCGGGGCATGTGGAATCTTTTCCTCTCAGTGTTTaGAAAGGCTTGGCTCTGGCTTGCACGTTCAGGTTTGCAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GPTEAGHVESFPLSV*KGLALACTFRFAVS Trigger: ACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAAGATTCCACATGCCCCGCCTCTGTAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TTTGCGTCTTGTTCAGAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTaGTTTGCAAAGTGCTGCTCGTCTTCAGAGCCCCTGTCTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: FASCSESSCLSSVQS*FAKCCSSSEPLSAT Trigger: TGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTGAACAAGACGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | GTGAGTACCTTAGGTCTTGCCCCTGTGGTCTCCACTTCTTGGTTCTaGACTCCTTTTCCATGTACTGGGTCCTTCCGTCCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSTLGLAPVVSTSWF*TPFPCTGSFRPAAV Trigger: GACAGCAGCTGGACGGAAGGACCCAGTACATGGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | CAAGGTTCTGGCTTCTTCCTAGGGATCTCGTCATCACTTGCCGAGTaGATCTGGTGGTCACCCCCACCCTGCTTTCTCACTCTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSGFFLGISSSLAE*IWWSPPPCFLTLTS Trigger: TGAAGTCAGAGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCCAGAACCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TGCTTTGCAAAGTGCTGCTCGTCTTCAGAGCCCCTGTCTGCGACATaGGTTTCTGACTCCACTTCCTGCTCACACGCTGCTGTTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CFAKCCSSSEPLSAT*VSDSTSCSHAAVRD Trigger: GTCTCTAACAGCAGCGTGTGAGCAGGAAGTGGAGTCAGAAACCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCAGATCAGACGCTGAAGCTCCAGCCTTCAGCACAGAGAGGAGGCCACTGAGGTCAGAATCAGCCTaGGAAATAAAGCAGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRSDAEAPAFSTERRPLRSESA*EIKQSP Trigger: AGGTGACTGCTTTATTTCCAAGGCTGATTCTGACCT...CAGTGGCCTCCTCTCTGTGCTGAAGGCTGGAGCTTCAGCGTCTGATCTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS CCA 90 bp | TTTCAGCCCAGCAGCCACTCAGCATTGCAGCAAAATAACTCGACCTaGCACTTAAAATGGCCCTGTGGGCTCGGAAGCTCCTCCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: FQPSSHSALQQNNST*HLKWPCGLGSSSHQ Trigger: TTGATGGGAGGAGCTTCCGAGCCCACAGGGCCATTTTAAGTGCCAGGTCGAGTTATTTTGCTGCAATGCTGAGTGGCTGCTGGGCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TCCCTTCTCCCGGGGATAGCCTATTGTAGATCGAGACCAAGGTTCTaGCTTCTTCCTAGGGATCTCGTCATCACTTGCCGAGTGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPGIAYCRSRPRF*LLPRDLVITCRVDL Trigger: CAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCCAGAACCTTGGTCTCGATCTACAATAGGCTATCCCCGGGAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | GAAGATGTGGTAGCACTACCAGTGTCGGATTCTGGACTCTCTCTTTaGTGTGTGGCACCAGTGTTCAAATCCCAGGGGCCCACGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: EDVVALPVSDSGLSL*CVAPVFKSQGPTNG Trigger: TCCATTCGTGGGCCCCTGGGATTTGAACACTGGTGCCACACATCAAAGAGAGAGTCCAGAATCCGACACTGGTAGTGCTACCACATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | TCTCAGTGTTTGCAAAGGCTTGGCTCTGGCTTGCACGTTCAGGTTTaGAGTGAGTACCTTAGGTCTTGCCCCTGTGGTCTCCACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQCLQRLGSGLHVQV*SEYLRSCPCGLHFL Trigger: CAAGAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | TTTGCAGTGAGTACCTTAGGTCTTGCCCCTGTGGTCTCCACTTCTTaGTTCTGGACTCCTTTTCCATGTACTGGGTCCTTCCGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FAVSTLGLAPVVSTS*FWTPFPCTGSFRPA Trigger: AGCTGGACGGAAGGACCCAGTACATGGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTCACTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | GACAGTTCACTCCACCTGTTCCAAGTGTCAGCGTGTGCTGAACCCTaGGGTTTCGAGCTATCTCGAGCTAAGAGGAGTGTCTGGTTGATT | + |
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Preference number: 5 (lower is better) Translates to: DSSLHLFQVSACAEP*GFELSRAKRSVWLI Trigger: AATCAACCAGACACTCCTCTTAGCTCGAGATAGCTCGAAACCTCAGGGTTCAGCACACGCTGACACTTGGAACAGGTGGAGTGAACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | GTGGAATCTTTTCCTCTCAGTGTTTGCAAAGGCTTGGCTCTGGCTTaGACGTTCAGGTTTGCAGTGAGTACCTTAGGTCTTGCCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VESFPLSVCKGLALA*TFRFAVSTLGLAPV Trigger: CACAGGGGCAAGACCTAAGGTACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAAGATTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 90 bp | AGCCACTCAGCATTGCAGCAAAATAACTCGACCTGGCACTTAAAATaGCCCTGTGGGCTCGGAAGCTCCTCCCATCAACACAAATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHSALQQNNSTWHLK*PCGLGSSSHQHKCQ Trigger: TTGACATTTGTGTTGATGGGAGGAGCTTCCGAGCCCACAGGGCCATTTTAAGTGCCAGGTCGAGTTATTTTGCTGCAATGCTGAGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGCTGTCCAAACATCTGGGAACTCTCATAGGGTCCTGTGGAGAGCAAGAAACTGCCTTGTGCACTTaGAACAGCGAGCCACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CKLSKHLGTLIGSCGEQETALCT*NSEPLT Trigger: TGTCAGTGGCTCGCTGTTCAAAGTGCACAAGGCAGT...TTCTTGCTCTCCACAGGACCCTATGAGAGTTCCCAGATGTTTGGACAGCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS TCA 90 bp | TTAAAACATCAACATCAGAGCCTTGTCTCCTTTGCTGAGAGCTGGTaGGCACAGGCTTCCTGCCAAGTCTGCGGTCATCACCTTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LKHQHQSLVSFAESW*AQASCQVCGHHLCQ Trigger: TTGACAAAGGTGATGACCGCAGACTTGGCAGGAAGCCTGTGCTCACCAGCTCTCAGCAAAGGAGACAAGGCTCTGATGTTGATGTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | ATACATGGAGGTTTGTGCCATTGTATCACAATCATCTATGTCTCCTaGGAACACAGCGTTATTAGCTCCCTTGGGAGGCGTGGGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IHGGLCHCITIIYVS*EHSVISSLGRRGTA Trigger: AGCCGTCCCACGCCTCCCAAGGGAGCTAATAACGCTGTGTTCTCAGGAGACATAGATGATTGTGATACAATGGCACAAACCTCCATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 90 bp | GTCTCTTTTTCTCTTGACTGCCTAATGGACTTTGTGGCTGAGGTCTaGAAGGTATCTGGGACACTTCAGGACCACTGGTGTCACAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSFSLDCLMDFVAEV*KVSGTLQDHWCHKQ Trigger: TTGCTTGTGACACCAGTGGTCCTGAAGTGTCCCAGATACCTTGCAGACCTCAGCCACAAAGTCCATTAGGCAGTCAAGAGAAAAAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | AACCCTGAGGTTTCGAGCTATCTCGAGCTAAGAGGAGTGTCTGGTTaGTTAAATACTGGGCTAAGCTTAGGTCTTCAGGCAGAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPEVSSYLELRGVSG*LNTGLSLGLQAESL Trigger: CAAGCTCTCTGCCTGAAGACCTAAGCTTAGCCCAGTATTTAATCAACCAGACACTCCTCTTAGCTCGAGATAGCTCGAAACCTCAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | CCATCGACAGGGCTGCTTCTGTCCACTTTACTCTGGGTAAACCCATaGTCAGCCTGTCACTTTCCATTAGAAGAAAAGCAGCATTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSTGLLLSTLLWVNP*SACHFPLEEKQHSH Trigger: ATGGGAATGCTGCTTTTCTTCTAATGGAAAGTGACAGGCTGATCATGGGTTTACCCAGAGTAAAGTGGACAGAAGCAGCCCTGTCGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS GCA 90 bp | AGAGAGCTTGTGATATTTAAGTTTGCGTCTTGTTCAGAAAGCAGCTaGCTCAGCAGTGTCCAGTCCTGCTTTGCAAAGTGCTGCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RELVIFKFASCSESS*LSSVQSCFAKCCSS Trigger: AGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTGAACAAGACGCAAACTTAAATATCACAAGCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS-3UTR CAA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTACGGCTCTCTTTCACTaGCCCTTCCTGAGGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCTALFH*PFLRQP Trigger: GGGCTGCCTCAGGAAGGGCAAGTGAAAGAGAGCCGT...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGCTGTCCAAACATCTGGGAACTCTCATAGGGTCCTGTGGAGAGCAAGAAAAGAGTAATACACTCTaGGGAGCTTTCAGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CKLSKHLGTLIGSCGEQEKSNTL*GAFSPA Trigger: TGCTGGGCTGAAAGCTCCCAAGAGTGTATTACTCTT...TTCTTGCTCTCCACAGGACCCTATGAGAGTTCCCAGATGTTTGGACAGCTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS GCA 90 bp | TTGACCTATCTTGACATGCTAGCTCCAGTCTCTTTTTCTCTTGACTaGCTAATGGACTTTGTGGCTGAGGTCTGCAAGGTATCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LTYLDMLAPVSFSLD*LMDFVAEVCKVSGT Trigger: TGTCCCAGATACCTTGCAGACCTCAGCCACAAAGTCCATTAGGCAGTCAAGAGAAAAAGAGACTGGAGCTAGCATGTCAAGATAGGTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | TCCATTGGTAATTCTTGCAACTGCTCGAGACTTTACTGCTGCAGTTaGCATTACTCCATTGCTCACCATCTGTCCTGGGGAATCACTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIGNSCNCSRLYCCS*HYSIAHHLSWGITN Trigger: GTTAGTGATTCCCCAGGACAGATGGTGAGCAATGGAGTAATGTCAACTGCAGCAGTAAAGTCTCGAGCAGTTGCAAGAATTACCAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | TCATGCAGTCAGCAAAAAGGCTTTCCACTCCGACTGAATGAGCAATaGTTAAGCATTCTAGAATTGATGCCCACGTTCTGGGAACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSQQKGFPLRLNEQ*LSILELMPTFWEQA Trigger: AGCCTGTTCCCAGAACGTGGGCATCAATTCTAGAATGCTTAATCATTGCTCATTCAGTCGGAGTGGAAAGCCTTTTTGCTGACTGCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS-3UTR CAA 90 bp | ACGCTGTATTTCAACAGTGGTAACATAGGTCACCAGCAGGTATGCCTTTTAACTAGCAGCCACTCAGCATaGCAGCAAAATAACTCGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLYFNSGNIGHQQVCLLTSSHSA*QQNNST Trigger: GGTCGAGTTATTTTGCTGCAATGCTGAGTGGCTGCT...AGTTAAAAGGCATACCTGCTGGTGACCTATGTTACCACTGTTGAAATACAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162298.4 |
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| CDS TCA 90 bp | ATGCAGTTCATGCAGTCAGCAAAAAGGCTTTCCACTCCGACTGAATaGGCAATGATTAAGCATTCTAGAATTGATGCCCACGTTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MQFMQSAKRLSTPTE*AMIKHSRIDAHVLG Trigger: TCCCAGAACGTGGGCATCAATTCTAGAATGCTTAATCATTGCTCATTCAGTCGGAGTGGAAAGCCTTTTTGCTGACTGCATGAACTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS TCA 90 bp | TGTTCCATTGGTAATTCTTGCAACTGCTCGAGACTTTACTGCAGTTaGCATTACTCCATTGCTCACCATCTGTCCTGGGGAATCACTAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSIGNSCNCSRLYCS*HYSIAHHLSWGITN Trigger: GTTAGTGATTCCCCAGGACAGATGGTGAGCAATGGAGTAATGTCAACTGCAGTAAAGTCTCGAGCAGTTGCAAGAATTACCAATGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152474.8 |
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| CDS CCA 90 bp | CCTTCCGTCCAGCTGCTGTCACTCTTGATGGTCTTCCCACAACAGTaGATGACAAACCTTCTATCTTTGTATGATCACTGTTTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSVQLLSLLMVFPQQ*MTNLLSLYDHCFLF Trigger: AAACAGAAAACAGTGATCATACAAAGATAGAAGGTTTGTCATCCACTGTTGTGGGAAGACCATCAAGAGTGACAGCAGCTGGACGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS CCA 90 bp | GTTTACAGTTCCACCTTTCTTGGGCTGACTTGGGATTTTAGGCATTaGTACCAGCTTTGCATTAACCTTCTGCAAAGTTGTGTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VYSSTFLGLTWDFRH*YQLCINLLQSCVSL Trigger: CAAGGACACACAACTTTGCAGAAGGTTAATGCAAAGCTGGTACCAATGCCTAAAATCCCAAGTCAGCCCAAGAAAGGTGGAACTGTAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCAGCTGCTGTCACTCTaGATGGTCTTCCCACAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCQLLSL*MVFPQQ Trigger: CTGTTGTGGGAAGACCATCAAGAGTGACAGCAGCTG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCACCTGGTCTTTTGATCTaGAGCTTGAGCCAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPPGLLI*SLSQGG Trigger: CCCACCCTGGCTCAAGCTCAAGATCAAAAGACCAGG...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS GCA 90 bp | ACCTTTCTTGGGCTGACTTGGGATTTTAGGCATTGGTACCAGCTTTaGATTAACCTTCTGCAAAGTTGTGTGTCCTTGCTTGACAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TFLGLTWDFRHWYQL*INLLQSCVSLLDNF Trigger: AAAGTTGTCAAGCAAGGACACACAACTTTGCAGAAGGTTAATGCAAAGCTGGTACCAATGCCTAAAATCCCAAGTCAGCCCAAGAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS CCA 90 bp | TCTCATATATTGGAGAGAGGGTTTTTGAAGGCCGGTGGTCATACATaGAGGTTTGTGCCATTGTATCACAATCATCTATGTCTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHILERGFLKAGGHT*RFVPLYHNHLCLLR Trigger: TCTCAGGAGACATAGATGATTGTGATACAATGGCACAAACCTCCATGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 90 bp | TTCGAGCTATCTCGAGCTAAGAGGAGTGTCTGGTTGATTAAATACTaGGCTAAGCTTAGGTCTTCAGGCAGAGAGCTTGTGATATTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FELSRAKRSVWLIKY*AKLRSSGRELVIFK Trigger: CTTAAATATCACAAGCTCTCTGCCTGAAGACCTAAGCTTAGCCCAGTATTTAATCAACCAGACACTCCTCTTAGCTCGAGATAGCTCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTTGTGGTCTCCACTTCTaGGTTCTGGACTCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCCGLHF*VLDSFS Trigger: GGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCACA...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTTTTTCCTCTCAGTGTTaGCAAAGGCTTGGCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCFSSQC*QRLGSG Trigger: GCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAA...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTAAGTCCTTGTCTTTTCCAGGTAAGATCTAGCATGTTATCTGTCTGTCTGATCCGTTTTCCTTaGTCTCATCCACAGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKLSPCLFQVRSSMLSVCLIRFP*SHPQSP Trigger: TGGGCTCTGTGGATGAGACAAAGGAAAACGGATCAG...ACAGACAGATAACATGCTAGATCTTACCTGGAAAAGACAAGGACTTAGTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS TCA 90 bp | TTCATCAGATCCCACTTCTTCACACTCATCTACCGAGAGCAACACTaGCCTTCTAAACTTCTTAGTTGCAGAAAACTCACGACTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FIRSHFFTLIYREQH*PSKLLSCRKLTTFM Trigger: CATGAAAGTCGTGAGTTTTCTGCAACTAAGAAGTTTAGAAGGTCAGTGTTGCTCTCGGTAGATGAGTGTGAAGAAGTGGGATCTGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS TCA 90 bp | GAAGAAAAGCAGCATTCCCATGATTTAGGGACTGAATCTGCATACTaGGACAGGTTTTCTGAATCTCAGGAGGAACATTTGCAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEKQHSHDLGTESAY*DRFSESQEEHLQSF Trigger: GAAGCTTTGCAAATGTTCCTCCTGAGATTCAGAAAACCTGTCTCAGTATGCAGATTCAGTCCCTAAATCATGGGAATGCTGCTTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
||
| CDS CCA 90 bp | GTTAGAGACATCTCATATATTGGAGAGAGGGTTTTTGAAGGCCGGTaGTCATACATGGAGGTTTGTGCCATTGTATCACAATCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: VRDISYIGERVFEGR*SYMEVCAIVSQSSM Trigger: CATAGATGATTGTGATACAATGGCACAAACCTCCATGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGATGTCTCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAAGTGTTTGCAAAGGCTaGGCTCTGGCTTGCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRSVCKG*ALACTF Trigger: GAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACT...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAGCTGCTGTGCATCCATaGCTGCTCCCTCTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRAAVHP*LLPLFF Trigger: GAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGC...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGATTCCGGAAAAAGCTGTaGGCTTCCTTTGGGTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRFRKKL*ASFGWD Trigger: GTCCCACCCAAAGGAAGCCAACAGCTTTTTCCGGAA...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS TCA 90 bp | AGCATGACTTTGCAGCATAATTTGTCCAGGAAGCACTTTTTGTTTTaGATCTTTGCTGTTTACAGTTCCACCTTTCTTGGGCTGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMTLQHNLSRKHFLF*IFAVYSSTFLGLTW Trigger: CCAAGTCAGCCCAAGAAAGGTGGAACTGTAAACAGCAAAGATTCAAAACAAAAAGTGCTTCCTGGACAAATTATGCTGCAAAGTCATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS TCA 90 bp | GCTTGTGACTGCAAGAGAAGAGTGAAGTTCTCACTCTCAATGATCTaGGAGAAGTTTTCAACAATAAATGTCACACACTCTTCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACDCKRRVKFSLSMI*EKFSTINVTHSSWS Trigger: GCTCCAAGAAGAGTGTGTGACATTTATTGTTGAAAACTTCTCTCAGATCATTGAGAGTGAGAACTTCACTCTTCTCTTGCAGTCACAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
||
| CDS CCA 90 bp | ATCAGCCTTGGAAATAAAGCAGTCACCTCCACCAGTAATATCCTCTaGAATTTCACCTTTCCCAAGAAAACAGTCAGACGAAGTTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: ISLGNKAVTSTSNIL*NFTFPKKTVRRSSI Trigger: TATAGAACTTCGTCTGACTGTTTTCTTGGGAAAGGTGAAATTCCAGAGGATATTACTGGTGGAGGTGACTGCTTTATTTCCAAGGCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
||
| CDS TCA 90 bp | TTTAAAAATTTTGTCCAACAGATGAGCTGTGCTGCTCATTGCTTGTaGCTGCAAGAGAAGAGTGAAGTTCTCACTCTCAATGATCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FKNFVQQMSCAAHCL*LQEKSEVLTLNDLR Trigger: TCTCAGATCATTGAGAGTGAGAACTTCACTCTTCTCTTGCAGTCACAAGCAATGAGCAGCACAGCTCATCTGTTGGACAAAATTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
||
| CDS GCA 90 bp | ATTGGTACCAGCTTTGCATTAACCTTCTGCAAAGTTGTGTGTCCTTaGTTGACAACTTTTCTCTTAGGTATTTGCTTATCTGTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: IGTSFALTFCKVVCP*LTTFLLGICLSVPC Trigger: GCATGGAACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCAGAAGGTTAATGCAAAGCTGGTACCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAATCAACATCAGAGCCTaGTCTCCTTTGCTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRINIRA*SPLLRA Trigger: AGCTCTCAGCAAAGGAGACAAGGCTCTGATGTTGAT...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS GCA 90 bp | TGCAAAGTTGTGTGTCCTTGCTTGACAACTTTTCTCTTAGGTATTTaGTTATCTGTTCCATGCCTCAACCTTGTTACATTTTCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CKVVCPCLTTFLLGI*LSVPCLNLVTFSSD Trigger: GTCTGATGAAAATGTAACAAGGTTGAGGCATGGAACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGTCAAGTGCAGCTACTaGAATTTTCTGCTGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPVKCSY*NFLLII Trigger: GATGATCAGCAGAAAATTCAAGTAGCTGCACTTGAC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTATCTAAAGTCTTATTTGTATATGGCACATGCAAAGGAGGATGTGAACCAGAAGCACTAAGTCCTTaGCCATCCCCTCTTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: TLSKVLFVYGTCKGGCEPEALSP*PSPLFI Trigger: AATAAAAAGAGGGGATGGCAAAGGACTTAGTGCTTC...TGGTTCACATCCTCCTTTGCATGTGCCATATACAAATAAGACTTTAGATAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGACAACTTTGGACATTTTaGTACTGTCACCATGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRQLWTF*YCHHAW Trigger: CCAAGCATGGTGACAGTACAAAAATGTCCAAAGTTG...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAACTTTACTGCTGCAGTaGACATTACTCCATTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRTLLLQ*TLLHCS Trigger: TGAGCAATGGAGTAATGTCAACTGCAGCAGTAAAGT...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTACTGCTTTCAGTAATATTACTATGGTTATTGCACGGCCCTCTTAGAACCATAGTTTTAGACTaGCCAGAGACATATTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLSVILLWLLHGPLRTIVLD*PETYFP Trigger: GGGAAAATATGTCTCTGGCAAGTCTAAAACTATGGT...TCTAAGAGGGCCGTGCAATAACCATAGTAATATTACTGAAAGCAGTAAACTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS GCA 90 bp | GTTTTCATCTCTTTCACAACTTTGGACATTTTTGTACTGTCACCATaGTTGGACACTTTATTTATACTGTTTCTGTTAGTGCTTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFISFTTLDIFVLSP*LDTLFILFLLVLDA Trigger: TGCATCAAGCACTAACAGAAACAGTATAAATAAAGTGTCCAAGCATGGTGACAGTACAAAAATGTCCAAAGTTGTGAAAGAGATGAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | TCCTCCCTTAAAAGCCTGAGCACGTCGCGGCTGAGCTaGTCCGACACCGCCGCCTTCAGCCGGCGCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLKSLSTSRLS*SDTAAFSRRRS Trigger: GGAGCGGCGCCGGCTGAAGGCGGCGGTGTCGGAGCAGCTCAGCCGCGACGTGCTCAGGCTTTTAAGGGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
||
| CDS CAA 72 bp | AGCTCCCTTGGGAGGCGTGGGACGGCTCTCTTTCACTaGCCCTTCCTGAGGCAGCCCCTGGCTGGGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLGRRGTALFH*PFLRQPLAGTG Trigger: TCCTGTCCCAGCCAGGGGCTGCCTCAGGAAGGGCAAGTGAAAGAGAGCCGTCCCACGCCTCCCAAGGGAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 72 bp | AGCTTGAGCCAGGGTGGGAGGGGCGCTCTTCGTCCGTaGCTGAGCTGCTGTGCATCCATTGCTGCTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSQGGRGALRP*LSCCASIAAPS Trigger: AGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | CAGGGTGGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTaGTGTGCATCCATTGCTGCTCCCTCTTTTCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: QGGRGALRPWLS*CASIAAPSFLR Trigger: GCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | GCACCTTCAACTCTTCAGGGGTGCTGGTGTCGCTGCTaGTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: APSTLQGCWCRC*SSQGSHGTALC Trigger: GCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCACCCCTGAAGAGTTGAAGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | CGTGCACCTTCAACTCTTCAGGGGTGCTGGTGTCGCTaGTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAPSTLQGCWCR*CSSQGSHGTAL Trigger: CAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCACCCCTGAAGAGTTGAAGGTGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 72 bp | GTGCTGGTGTCGCTGCTGCTCCTCCCAAGGAAGTCATaGCACAGCGCTGTGCTGCACTTGGAGATGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVSLLLLPRKS*HSAVLHLEMPL Trigger: CAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 72 bp | GGTCACCCTCGTGCACCTTCAACTCTTCAGGGGTGCTaGTGTCGCTGCTGCTCCTCCCAAGGAAGTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHPRAPSTLQGC*CRCCSSQGSHG Trigger: GCCATGACTTCCTTGGGAGGAGCAGCAGCGACACCAGCACCCCTGAAGAGTTGAAGGTGCACGAGGGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | TGCTGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTaGTGCACTTGGAGATGCCTCTGTCGTGTGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CCSSQGSHGTAL*CTWRCLCRVSP Trigger: AGGGCTCACACGACAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 72 bp | CTAACCTGGTCTTTTGATCTTGAGCTTGAGCCAGGGTaGGAGGGGCGCTCTTCGTCCGTGGCTGAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTWSFDLELEPG*EGRSSSVAELL Trigger: CAGCAGCTCAGCCACGGACGAAGAGCGCCCCTCCCACCCTGGCTCAAGCTCAAGATCAAAAGACCAGGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
||
| CDS GCA 72 bp | CGCTCTTCGTCCGTGGCTGAGCTGCTGTGCATCCATTaGTGCTCCCTCTTTTCTTCGCAGCTGTCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSVAELLCIH*CSLFSSQLSVV Trigger: CACCACAGACAGCTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | TGCTCCTCCCAAGGAAGTCATGGCACAGCGCTGTGCTaGACTTGGAGATGCCTCTGTCGTGTGAGCCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSSQGSHGTALC*TWRCLCRVSPH Trigger: ATGAGGGCTCACACGACAGAGGCATCTCCAAGTGCAGCACAGCGCTGTGCCATGACTTCCTTGGGAGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CAA 90 bp | CGTCTTGTTCAGAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTGCTTaGCAAAGTGCTGCTCGTCTTCAGAGCCCCTGTCTGCGACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLVQKAAASAVSSPA*QSAARLQSPCLRHG Trigger: CCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTGAACAAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | TCTTCGTCCGTGGCTGAGCTGCTGTGCATCCATTGCTaGTCCCTCTTTTCTTCGCAGCTGTCTGTGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSVAELLCIHC*SLFSSQLSVVL Trigger: CAGCACCACAGACAGCTGCGAAGAAAAGAGGGAGCAGCAATGGATGCACAGCAGCTCAGCCACGGACGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | AGGTTCTGGCTTCTTCCTAGGGATCTCGTCATCACTTaGCGAGTGGATCTGGTGGTCACCCCCACCCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RFWLLPRDLVIT*RVDLVVTPTLL Trigger: AAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCCAGAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | TGCCTCAGCAGTGTCCAGTCCTGCTTTGCAAAGTGCTaGTCGTCTTCAGAGCCCCTGTCTGCGACATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CLSSVQSCFAKC*SSSEPLSATWV Trigger: AACCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS CCA 72 bp | GGCTTCTTCCTAGGGATCTCGTCATCACTTGCCGAGTaGATCTGGTGGTCACCCCCACCCTGCTTTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GFFLGISSSLAE*IWWSPPPCFLT Trigger: AGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | AAGTGCTGCTCGTCTTCAGAGCCCCTGTCTGCGACATaGGTTTCTGACTCCACTTCCTGCTCACACGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KCCSSSEPLSAT*VSDSTSCSHAA Trigger: AGCAGCGTGTGAGCAGGAAGTGGAGTCAGAAACCCATGTCGCAGACAGGGGCTCTGAAGACGAGCAGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CAGAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTGCTTaGCAAAGTGCTGCTCGTCTTCAGAGCCCCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QKAAASAVSSPA*QSAARLQSPCL Trigger: CAGACAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CAACATCAGAGCCTTGTCTCCTTTGCTGAGAGCTGGTaGGCACAGGCTTCCTGCCAAGTCTGCGGTCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: QHQSLVSFAESW*AQASCQVCGHH Trigger: GTGATGACCGCAGACTTGGCAGGAAGCCTGTGCTCACCAGCTCTCAGCAAAGGAGACAAGGCTCTGATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | GTTTCATCTGCTGAAGAAGAAACCTGGTCCCCTTCCTaGGCAGATGGGATGCTACCCCGTGGCGTACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSAEEETWSPS*ADGMLPRGVLP Trigger: GGGAAGTACGCCACGGGGTAGCATCCCATCTGCTCAGGAAGGGGACCAGGTTTCTTCTTCAGCAGATGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | TGTTCAGAAAGCAGCTGCCTCAGCAGTGTCCAGTCCTaGTTTGCAAAGTGCTGCTCGTCTTCAGAGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSESSCLSSVQS*FAKCCSSSEPL Trigger: CAGGGGCTCTGAAGACGAGCAGCACTTTGCAAAGCAGGACTGGACACTGCTGAGGCAGCTGCTTTCTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | CTAGGGATCTCGTCATCACTTGCCGAGTGGATCTGGTaGTCACCCCCACCCTGCTTTCTCACTCTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGISSSLAEWIW*SPPPCFLTLTS Trigger: TGAAGTCAGAGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | TTCCTAGGGATCTCGTCATCACTTGCCGAGTGGATCTaGTGGTCACCCCCACCCTGCTTTCTCACTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: FLGISSSLAEWI*WSPPPCFLTLT Trigger: AGTCAGAGTGAGAAAGCAGGGTGGGGGTGACCACCAGATCCACTCGGCAAGTGATGACGAGATCCCTAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CTCCACCTGTTCCAAGTGTCAGCGTGTGCTGAACCCTaGGGTTTCGAGCTATCTCGAGCTAAGAGGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLFQVSACAEP*GFELSRAKRSV Trigger: GACACTCCTCTTAGCTCGAGATAGCTCGAAACCTCAGGGTTCAGCACACGCTGACACTTGGAACAGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS TCA 72 bp | CGTGGTGGCACTTGTTGCCGAATCATCAAGTGGGGATaGCAGTTCACTCCACCTGTTCCAAGTGTCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGGTCCRIIKWG*QFTPPVPSVSV Trigger: CACGCTGACACTTGGAACAGGTGGAGTGAACTGTCATCCCCACTTGATGATTCGGCAACAAGTGCCACCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | TTGCAAAGGCTTGGCTCTGGCTTGCACGTTCAGGTTTaGAGTGAGTACCTTAGGTCTTGCCCCTGTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQRLGSGLHVQV*SEYLRSCPCGL Trigger: GAGACCACAGGGGCAAGACCTAAGGTACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | GGTAGCACTACCAGTGTCGGATTCTGGACTCTCTCTTaGATGTGTGGCACCAGTGTTCAAATCCCAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSTTSVGFWTLS*MCGTSVQIPGA Trigger: GGCCCCTGGGATTTGAACACTGGTGCCACACATCAAAGAGAGAGTCCAGAATCCGACACTGGTAGTGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | GTTTGCAGTGAGTACCTTAGGTCTTGCCCCTGTGGTCTCCACTTCTaGGTTCTGGACTCCTTTTCCATGTACTGGGTCCTTCCGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VCSEYLRSCPCGLHF*VLDSFSMYWVLPSS Trigger: GCTGGACGGAAGGACCCAGTACATGGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTCACTGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | GAGGCGGGGCATGTGGAATCTTTTCCTCTCAGTGTTTaGAAAGGCTTGGCTCTGGCTTGCACGTTCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EAGHVESFPLSV*KGLALACTFRF Trigger: AAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAAGATTCCACATGCCCCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | AACAGCGAGCCACTGACAGAAAGAATGGTGTCTGTGTaGATTTCCTCCCTTAAAAGCCTGAGCACGTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NSEPLTERMVSV*ISSLKSLSTSR Trigger: CCGCGACGTGCTCAGGCTTTTAAGGGAGGAAATCCACACAGACACCATTCTTTCTGTCAGTGGCTCGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | GCATTGCAGCAAAATAACTCGACCTGGCACTTAAAATaGCCCTGTGGGCTCGGAAGCTCCTCCCATCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: ALQQNNSTWHLK*PCGLGSSSHQH Trigger: GTGTTGATGGGAGGAGCTTCCGAGCCCACAGGGCCATTTTAAGTGCCAGGTCGAGTTATTTTGCTGCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | TACCAGTGTCGGATTCTGGACTCTCTCTTTGATGTGTaGCACCAGTGTTCAAATCCCAGGGGCCCACGAATG | + |
|
Preference number: 6 (lower is better) Translates to: YQCRILDSLFDV*HQCSNPRGPRM Trigger: CATTCGTGGGCCCCTGGGATTTGAACACTGGTGCCACACATCAAAGAGAGAGTCCAGAATCCGACACTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | CCGGGGATAGCCTATTGTAGATCGAGACCAAGGTTCTaGCTTCTTCCTAGGGATCTCGTCATCACTTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PGIAYCRSRPRF*LLPRDLVITCR Trigger: TCGGCAAGTGATGACGAGATCCCTAGGAAGAAGCCAGAACCTTGGTCTCGATCTACAATAGGCTATCCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | TGTACCAGGAAGGCCCACAGCTTACCACGCACAGCTTaGATCCTGCACGTAAAGCCCATTTCCTTTGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CTRKAHSLPRTA*ILHVKPISFVL Trigger: AAGCACAAAGGAAATGGGCTTTACGTGCAGGATCCAAGCTGTGCGTGGTAAGCTGTGGGCCTTCCTGGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CAA 72 bp | AGAGGCGGGGCATGTGGAATCTTTTCCTCTCAGTGTTaGCAAAGGCTTGGCTCTGGCTTGCACGTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGGACGIFSSQC*QRLGSGLHVQV Trigger: AACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAAGATTCCACATGCCCCGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TGTACATTACCTGAGAACACAGCGTTATTAGCTCCCTaGGGAGGCGTGGGACGGCTCTCTTTCACTTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTLPENTALLAP*GGVGRLSFTCP Trigger: AGGGCAAGTGAAAGAGAGCCGTCCCACGCCTCCCAAGGGAGCTAATAACGCTGTGTTCTCAGGTAATGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS CAA 90 bp | CAGCCAGTTCTGACCTCAGCTCACGTTTCACTGAGTCGCCCAGGGTaGACCTATCTTGACATGCTAGCTCCAGTCTCTTTTTCTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QPVLTSAHVSLSRPG*TYLDMLAPVSFSLD Trigger: GTCAAGAGAAAAAGAGACTGGAGCTAGCATGTCAAGATAGGTCAACCCTGGGCGACTCAGTGAAACGTGAGCTGAGGTCAGAACTGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CAGCCCCTGGCTGGGACAGGAGTCCAGAGATTTCACTaGGCTGATCTTTGGTATATTGGAGCTGAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPLAGTGVQRFH*ADLWYIGAEFS Trigger: AGAGAACTCAGCTCCAATATACCAAAGATCAGCTCAGTGAAATCTCTGGACTCCTGTCCCAGCCAGGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | TCTCTTGACTGCCTAATGGACTTTGTGGCTGAGGTCTaGAAGGTATCTGGGACACTTCAGGACCACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLDCLMDFVAEV*KVSGTLQDHWC Trigger: ACACCAGTGGTCCTGAAGTGTCCCAGATACCTTGCAGACCTCAGCCACAAAGTCCATTAGGCAGTCAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | AAAGCTGTTGGCTTCCTTTGGGTGGGACATCTAACCTaGTCTTTTGATCTTGAGCTTGAGCCAGGGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KAVGFLWVGHLT*SFDLELEPGWE Trigger: CTCCCACCCTGGCTCAAGCTCAAGATCAAAAGACCAGGTTAGATGTCCCACCCAAAGGAAGCCAACAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060553.8 |
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| CDS CAA 72 bp | CATGTACTGGGTCCTTCCGTCCAGCTGCTGTCACTCTaGATGGTCTTCCCACAACAGTGGATGACAAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HVLGPSVQLLSL*MVFPQQWMTNL Trigger: AAGGTTTGTCATCCACTGTTGTGGGAAGACCATCAAGAGTGACAGCAGCTGGACGGAAGGACCCAGTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | GAGTACCTTAGGTCTTGCCCCTGTGGTCTCCACTTCTaGGTTCTGGACTCCTTTTCCATGTACTGGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EYLRSCPCGLHF*VLDSFSMYWVL Trigger: AAGGACCCAGTACATGGAAAAGGAGTCCAGAACCAAGAAGTGGAGACCACAGGGGCAAGACCTAAGGTACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CCAGGAGCTCTGGCTAACAAGACTGCCTTGTGCACTTaGAACAGCGAGCCACTGACAGAAAGAATGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGALANKTALCT*NSEPLTERMVS Trigger: AGACACCATTCTTTCTGTCAGTGGCTCGCTGTTCAAAGTGCACAAGGCAGTCTTGTTAGCCAGAGCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CCTAACTCAGACGCAGGCTCCAGGTCAGAATCAGCCTaGGAAATAAAGCAGTCACCTCCACCAGTAATATCC | + |
|
Preference number: 6 (lower is better) Translates to: PNSDAGSRSESA*EIKQSPPPVIS Trigger: GGATATTACTGGTGGAGGTGACTGCTTTATTTCCAAGGCTGATTCTGACCTGGAGCCTGCGTCTGAGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | ACTCTTGGGAGCTTTCAGCCCAGCAGCCACTCAGCATaGCAGCAAAATAACTCGACCTGGCACTTAAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGSFQPSSHSA*QQNNSTWHLKW Trigger: CCATTTTAAGTGCCAGGTCGAGTTATTTTGCTGCAATGCTGAGTGGCTGCTGGGCTGAAAGCTCCCAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | CTCCTTTTCCATGTACTGGGTCCTTCCGTCCAGCTGCTGTCACTCTaGATGGTCTTCCCACAACAGTGGATGACAAACCTTCTATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFHVLGPSVQLLSL*MVFPQQWMTNLLSL Trigger: CAAAGATAGAAGGTTTGTCATCCACTGTTGTGGGAAGACCATCAAGAGTGACAGCAGCTGGACGGAAGGACCCAGTACATGGAAAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | ATCTGTCCTGGGGAATCACTAACGTATGGCTTCCCATCACGACACTaGTCTTCTACTGATCCGTTTTCCTTTGTCTCATCCACAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ICPGESLTYGFPSRH*SSTDPFSFVSSTEP Trigger: GGGCTCTGTGGATGAGACAAAGGAAAACGGATCAGTAGAAGACAAGTGTCGTGATGGGAAGCCATACGTTAGTGATTCCCCAGGACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | TTTAAAACATCAACATCAGAGCCTTGTCTCCTTTGCTaGGAGCTGGTGAGCACAGGCTTCCTGCCAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FKTSTSEPCLLC*ELVSTGFLPSL Trigger: CAGACTTGGCAGGAAGCCTGTGCTCACCAGCTCTCAGCAAAGGAGACAAGGCTCTGATGTTGATGTTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTTTCCTCTCAGTGTTTGCAAAGGCTTGGCTCTGGCTaGCACGTTCAGGTTTGCAGTGAGTACCTTAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSQCLQRLGSG*HVQVCSEYLRS Trigger: AGACCTAAGGTACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CATGTGGAATCTTTTCCTCTCAGTGTTTGCAAAGGCTaGGCTCTGGCTTGCACGTTCAGGTTTGCAGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HVESFPLSVCKG*ALACTFRFAVS Trigger: ACTCACTGCAAACCTGAACGTGCAAGCCAGAGCCAAGCCTTTGCAAACACTGAGAGGAAAAGATTCCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTCGCAGCTGTCTGTGGTGCTGAAGCACTAAGTCCTTaGCCATCCCCTCTTTTTATTACACTGCTATTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FAAVCGAEALSP*PSPLFITLLFP Trigger: CGGGAATAGCAGTGTAATAAAAAGAGGGGATGGCAAAGGACTTAGTGCTTCAGCACCACAGACAGCTGCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTCTCTCTGATGGAGCTCCAAATGACACGGTCGTTCTaGAGACTTAGTGTCCCCATCCATGAATGTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLMELQMTRSF*RLSVPIHECAV Trigger: CACAGCACATTCATGGATGGGGACACTAAGTCTCAAGAACGACCGTGTCATTTGGAGCTCCATCAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CCTGCTCACACGCTGCTGTTAGAGACATCTCATATATaGGAGAGAGGGTTTTTGAAGGCCGGTGGTCATACA | + |
|
Preference number: 6 (lower is better) Translates to: PAHTLLLETSHI*ERGFLKAGGHT Trigger: TGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGATGTCTCTAACAGCAGCGTGTGAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | ATGCTGAGTTTCCAATTCCAGGATTGTCCACTCCCCTaGAGGCGAACAATCTGTGGAAGAAACACTAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: MLSFQFQDCPLP*RRTICGRNTSR Trigger: ACGGCTAGTGTTTCTTCCACAGATTGTTCGCCTCAAGGGGAGTGGACAATCCTGGAATTGGAAACTCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | ACTCCACTTCCTGCTCACACGCTGCTGTTAGAGACATCTCATATATaGGAGAGAGGGTTTTTGAAGGCCGGTGGTCATACATGGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPLPAHTLLLETSHI*ERGFLKAGGHTWRF Trigger: AAACCTCCATGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGATGTCTCTAACAGCAGCGTGTGAGCAGGAAGTGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | ATAGAAAGACTGTACCAGGAAGGCCCACAGCTTACCACGCACAGCTaGGATCCTGCACGTAAAGCCCATTTCCTTTGTGCTTTCAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: IERLYQEGPQLTTHS*DPARKAHFLCAFRI Trigger: AATTCTGAAAGCACAAAGGAAATGGGCTTTACGTGCAGGATCCAAGCTGTGCGTGGTAAGCTGTGGGCCTTCCTGGTACAGTCTTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CAA 90 bp | AAATCTCCTCCTAACTCAGACGCAGGCTCCAGGTCAGAATCAGCCTaGGAAATAAAGCAGTCACCTCCACCAGTAATATCCTCTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: KSPPNSDAGSRSESA*EIKQSPPPVISSGI Trigger: AATTCCAGAGGATATTACTGGTGGAGGTGACTGCTTTATTTCCAAGGCTGATTCTGACCTGGAGCCTGCGTCTGAGTTAGGAGGAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | CACACGCTGCTGTTAGAGACATCTCATATATTGGAGAGAGGGTTTTaGAAGGCCGGTGGTCATACATGGAGGTTTGTGCCATTGTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: HTLLLETSHILERGF*KAGGHTWRFVPLYH Trigger: GTGATACAATGGCACAAACCTCCATGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGATGTCTCTAACAGCAGCGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS TCA 72 bp | TGTTTAGAGACATGGTTCCTGCTGTCACTCACACCATaGAGCACGCTTTTCTCAGCTACCTCAGGTTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLETWFLLSLTP*STLFSATSGLE Trigger: TTCCAAACCTGAGGTAGCTGAGAAAAGCGTGCTTCATGGTGTGAGTGACAGCAGGAACCATGTCTCTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS TCA 72 bp | GGTTTGTGCCATTGTATCACAATCATCTATGTCTCCTaGGAACACAGCGTTATTAGCTCCCTTGGGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLCHCITIIYVS*EHSVISSLGRR Trigger: ACGCCTCCCAAGGGAGCTAATAACGCTGTGTTCTCAGGAGACATAGATGATTGTGATACAATGGCACAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
||
| CDS GCA 72 bp | CTTGACATGCTAGCTCCAGTCTCTTTTTCTCTTGACTaGCTAATGGACTTTGTGGCTGAGGTCTGCAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LDMLAPVSFSLD*LMDFVAEVCKV Trigger: TACCTTGCAGACCTCAGCCACAAAGTCCATTAGGCAGTCAAGAGAAAAAGAGACTGGAGCTAGCATGTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | AACAATAAATGTCACACACTCTTCTTGGAGCTGGGATaGCATCGACAGGGCTGCTTCTGTCCACTTTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: NNKCHTLFLELG*HRQGCFCPLYS Trigger: AGAGTAAAGTGGACAGAAGCAGCCCTGTCGATGGCATCCCAGCTCCAAGAAGAGTGTGTGACATTTATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CCA 72 bp | TCTCGAGCTAAGAGGAGTGTCTGGTTGATTAAATACTaGGCTAAGCTTAGGTCTTCAGGCAGAGAGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRAKRSVWLIKY*AKLRSSGRELV Trigger: CACAAGCTCTCTGCCTGAAGACCTAAGCTTAGCCCAGTATTTAATCAACCAGACACTCCTCTTAGCTCGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | GAGAAGTTTTCAACAATAAATGTCACACACTCTTCTTaGAGCTGGGATGCCATCGACAGGGCTGCTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: EKFSTINVTHSS*SWDAIDRAASV Trigger: GACAGAAGCAGCCCTGTCGATGGCATCCCAGCTCCAAGAAGAGTGTGTGACATTTATTGTTGAAAACTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CAA 72 bp | GGGGAATCACTAACGTATGGCTTCCCATCACGACACTaGTCTTCTACTGATCCGTTTTCCTTTGTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: GESLTYGFPSRH*SSTDPFSFVSS Trigger: GGATGAGACAAAGGAAAACGGATCAGTAGAAGACAAGTGTCGTGATGGGAAGCCATACGTTAGTGATTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | GTTTCGAGCTATCTCGAGCTAAGAGGAGTGTCTGGTTaGTTAAATACTGGGCTAAGCTTAGGTCTTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSSYLELRGVSG*LNTGLSLGLQA Trigger: TGCCTGAAGACCTAAGCTTAGCCCAGTATTTAATCAACCAGACACTCCTCTTAGCTCGAGATAGCTCGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTGAAGGCCGGTGGTCATACATGGAGGTTTGTGCCATaGTATCACAATCATCTATGTCTCCTGAGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: LKAGGHTWRFVP*YHNHLCLLRTQ Trigger: CTGTGTTCTCAGGAGACATAGATGATTGTGATACAATGGCACAAACCTCCATGTATGACCACCGGCCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | AGAGAAGTTTTCAACAATAAATGTCACACACTCTTCTaGGAGCTGGGATGCCATCGACAGGGCTGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: REVFNNKCHTLF*ELGCHRQGCFC Trigger: ACAGAAGCAGCCCTGTCGATGGCATCCCAGCTCCAAGAAGAGTGTGTGACATTTATTGTTGAAAACTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CAA 90 bp | AATGATCTGAGAGAAGTTTTCAACAATAAATGTCACACACTCTTCTaGGAGCTGGGATGCCATCGACAGGGCTGCTTCTGTCCACTTTAC | + |
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Preference number: 6 (lower is better) Translates to: NDLREVFNNKCHTLF*ELGCHRQGCFCPLY Trigger: GTAAAGTGGACAGAAGCAGCCCTGTCGATGGCATCCCAGCTCCAAGAAGAGTGTGTGACATTTATTGTTGAAAACTTCTCTCAGATCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CCA 72 bp | CAGCTGCTGTCACTCTTGATGGTCTTCCCACAACAGTaGATGACAAACCTTCTATCTTTGTATGATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: QLLSLLMVFPQQ*MTNLLSLYDHC Trigger: ACAGTGATCATACAAAGATAGAAGGTTTGTCATCCACTGTTGTGGGAAGACCATCAAGAGTGACAGCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CCTTCCAGTCCATACATATCAGCCACGTTCAGTATCTaGCCAACATTAGCCTTTTCGGGAAAATCCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSPYISATFSI*PTLAFSGKSKV Trigger: AACTTTGGATTTTCCCGAAAAGGCTAATGTTGGTCAGATACTGAACGTGGCTGATATGTATGGACTGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | ATGCAGTCAGCAAAAAGGCTTTCCACTCCGACTGAATaGGCAATGATTAAGCATTCTAGAATTGATGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: MQSAKRLSTPTE*AMIKHSRIDAH Trigger: GTGGGCATCAATTCTAGAATGCTTAATCATTGCTCATTCAGTCGGAGTGGAAAGCCTTTTTGCTGACTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CAGCATTCCCATGATTTAGGGACTGAATCTGCATACTaGGACAGGTTTTCTGAATCTCAGGAGGAACATTTG | + |
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Preference number: 6 (lower is better) Translates to: QHSHDLGTESAY*DRFSESQEEHL Trigger: CAAATGTTCCTCCTGAGATTCAGAAAACCTGTCTCAGTATGCAGATTCAGTCCCTAAATCATGGGAATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211896.2 |
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| CDS CCA 72 bp | GGAAATAAAGCAGTCACCTCCACCAGTAATATCCTCTaGAATTTCACCTTTCCCAAGAAAACAGTCAGACGA | + |
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Preference number: 6 (lower is better) Translates to: GNKAVTSTSNIL*NFTFPKKTVRR Trigger: TCGTCTGACTGTTTTCTTGGGAAAGGTGAAATTCCAGAGGATATTACTGGTGGAGGTGACTGCTTTATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094541.4 ENSMUST00000162298.4 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | TTTGCTGTTTACAGTTCCACCTTTCTTGGGCTGACTTaGGATTTTAGGCATTGGTACCAGCTTTGCATTAAC | + |
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Preference number: 6 (lower is better) Translates to: FAVYSSTFLGLT*DFRHWYQLCIN Trigger: GTTAATGCAAAGCTGGTACCAATGCCTAAAATCCCAAGTCAGCCCAAGAAAGGTGGAACTGTAAACAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | ATCTCATATATTGGAGAGAGGGTTTTTGAAGGCCGGTaGTCATACATGGAGGTTTGTGCCATTGTATCACAA | + |
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Preference number: 6 (lower is better) Translates to: ISYIGERVFEGR*SYMEVCAIVSQ Trigger: TTGTGATACAATGGCACAAACCTCCATGTATGACCACCGGCCTTCAAAAACCCTCTCTCCAATATATGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TACCTCAGGTTTGGAAGGTCGCTGAGAAGCATGACTTaGCAGCATAATTTGTCCAGGAAGCACTTTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: YLRFGRSLRSMT*QHNLSRKHFLF Trigger: AAACAAAAAGTGCTTCCTGGACAAATTATGCTGCAAAGTCATGCTTCTCAGCGACCTTCCAAACCTGAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | AACATTCATTTCTACATGGGTTATTCCTTGAAGAGTAATACACTCTaGGGAGCTTTCAGCCCAGCAGCCACTCAGCATTGCAGCAAAATA | + |
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Preference number: 6 (lower is better) Translates to: NIHFYMGYSLKSNTL*GAFSPAATQHCSKI Trigger: TATTTTGCTGCAATGCTGAGTGGCTGCTGGGCTGAAAGCTCCCAAGAGTGTATTACTCTTCAAGGAATAACCCATGTAGAAATGAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | GGTACCAGCTTTGCATTAACCTTCTGCAAAGTTGTGTGTCCTTGCTaGACAACTTTTCTCTTAGGTATTTGCTTATCTGTTCCATGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GTSFALTFCKVVCPC*TTFLLGICLSVPCL Trigger: GAGGCATGGAACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCAGAAGGTTAATGCAAAGCTGGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CCA 72 bp | AAAGCTGTTGGCTTCCTTTGGGTGGGACATCTAACCTaGTCTTTTGATCTGTTGAGACACATTGTTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: KAVGFLWVGHLT*SFDLLRHIVYL Trigger: AAGATAAACAATGTGTCTCAACAGATCAAAAGACCAGGTTAGATGTCCCACCCAAAGGAAGCCAACAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | GTCTTCCCACAACAGTGGATGACAAACCTTCTATCTTaGTATGATCACTGTTTTCTGTTTGGGGCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: VFPQQWMTNLLS*YDHCFLFGALP Trigger: TGGTAAAGCCCCAAACAGAAAACAGTGATCATACAAAGATAGAAGGTTTGTCATCCACTGTTGTGGGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CCCTCTTTTTATTACACTGCTATTCCCGTGAGAGTCTaGTTCATGAGTAAAGCTTTTGTTACTGGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSFYYTAIPVRV*FMSKAFVTGCS Trigger: GGAACAGCCAGTAACAAAAGCTTTACTCATGAACAAGACTCTCACGGGAATAGCAGTGTAATAAAAAGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | CATTGGTACCAGCTTTGCATTAACCTTCTGCAAAGTTGTGTGTCCTaGCTTGACAACTTTTCTCTTAGGTATTTGCTTATCTGTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: HWYQLCINLLQSCVS*LDNFSLRYLLICSM Trigger: CATGGAACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCAGAAGGTTAATGCAAAGCTGGTACCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | CCCACAACAGTGGATGACAAACCTTCTATCTTTGTATaGTCACTGTTTTCTGTTTGGGGCTTTACCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: PTTVDDKPSIFV*SLFSVWGFTIV Trigger: AACTATGGTAAAGCCCCAAACAGAAAACAGTGATCATACAAAGATAGAAGGTTTGTCATCCACTGTTGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | CTGCAAAGTTGTGTGTCCTTGCTTGACAACTTTTCTCTTAGGTATTaGCTTATCTGTTCCATGCCTCAACCTTGTTACATTTTCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LQSCVSLLDNFSLRY*LICSMPQPCYIFIR Trigger: TCTGATGAAAATGTAACAAGGTTGAGGCATGGAACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS TCA 72 bp | TTGCAGCATAATTTGTCCAGGAAGCACTTTTTGTTTTaGATCTTTGCTGTTTACAGTTCCACCTTTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQHNLSRKHFLF*IFAVYSSTFLG Trigger: CCCAAGAAAGGTGGAACTGTAAACAGCAAAGATTCAAAACAAAAAGTGCTTCCTGGACAAATTATGCTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | CTTTGGGTGGGACATCTAACCTGGTCTTTTGATCTGTaGAGACACATTGTTTATCTTGTTTTTCGAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LWVGHLTWSFDL*RHIVYLVFRSL Trigger: AAGACTTCGAAAAACAAGATAAACAATGTGTCTCAACAGATCAAAAGACCAGGTTAGATGTCCCACCCAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100951.9 ENSMUST00000211896.2 |
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| CDS CAA 90 bp | CAGGCTTCTGAAAGAAATTACAGTAATCTCTTCTTAAAACATAGATaGCTACTTCTCTCAATCCTTCCAGTCCATACATATCAGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: QASERNYSNLFLKHR*LLLSILPVHTYQPR Trigger: ACGTGGCTGATATGTATGGACTGGAAGGATTGAGAGAAGTAGCAATCTATGTTTTAAGAAGAGATTACTGTAATTTCTTTCAGAAGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094541.4 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTTGCATTAACCTTCTGCAAAGTTGTGTGTCCTTGCTaGACAACTTTTCTCTTAGGTATTTGCTTATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FALTFCKVVCPC*TTFLLGICLSV Trigger: AACAGATAAGCAAATACCTAAGAGAAAAGTTGTCAAGCAAGGACACACAACTTTGCAGAAGGTTAATGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS GCA 72 bp | TCTTTCACAACTTTGGACATTTTTGTACTGTCACCATaGTTGGACACTTTATTTATACTGTTTCTGTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: SFTTLDIFVLSP*LDTLFILFLLV Trigger: CACTAACAGAAACAGTATAAATAAAGTGTCCAAGCATGGTGACAGTACAAAAATGTCCAAAGTTGTGAAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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| CDS CAA 72 bp | TTCACAACTTTGGACATTTTTGTACTGTCACCATGCTaGGACACTTTATTTATACTGTTTCTGTTAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FTTLDIFVLSPC*DTLFILFLLVL Trigger: AAGCACTAACAGAAACAGTATAAATAAAGTGTCCAAGCATGGTGACAGTACAAAAATGTCCAAAGTTGTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060553.8 ENSMUST00000100951.9 ENSMUST00000152474.8 ENSMUST00000211896.2 |
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