Pregenerated sensors for BTBD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002803Ensembl transcript IDs: ENSMUST00000002880.7, ENSMUST00000165079.8, ENSMUST00000221104.2, ENSMUST00000221500.2, ENSMUST00000222209.2, ENSMUST00000223287.2, ENSMUST00000223368.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GATCGGGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATaGTGTCTAGGGTCAGCGGACACGGGCTGTGAGAAGTCAAGTTTC | + |
Preference number: 1 (lower is better) Translates to: DRGRPWTQVFLPPVE*CLGSADTGCEKSSF Trigger: GAAACTTGACTTCTCACAGCCCGTGTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CCA 90 bp | GTAAGGCAGCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTaGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTCCAACCT | + |
Preference number: 1 (lower is better) Translates to: VRQLEVSCTSTALTV*TLWRKSLVASPLQP Trigger: AGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 90 bp | CCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCGGACACGGGCTGTaGGAAGTCAAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCC | + |
Preference number: 1 (lower is better) Translates to: PSTCGMLSRVSGHGL*EVKFQTLADRESQA Trigger: GGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTTGACTTCTCACAGCCCGTGTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR GCA 90 bp | TTGAATGGTATCAGTAAGGCAGCTGGAAGTGTCCTGCACCTCCACTaGACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAG | + |
Preference number: 1 (lower is better) Translates to: LNGISKAAGSVLHLH*TYCVDSMEEEPGGK Trigger: CTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTTACTGATACCATTCAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 90 bp | GAGAAGTCAAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTaGATGGTATCAGTAAGGCAGCTGGAAGTGTCCTGCACCTCCACT | + |
Preference number: 1 (lower is better) Translates to: EKSSFRLWLIEKAKP*MVSVRQLEVSCTST Trigger: AGTGGAGGTGCAGGACACTTCCAGCTGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTTGACTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CAA 90 bp | AGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTaGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTC | + |
Preference number: 2 (lower is better) Translates to: RVLKLGCHWQGSGTT*DPSLPSTCGMLSRV Trigger: GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | TTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCGGACACGGAGGAAGAGCCTGGTaGCAAGTCCACTCCAACCTT | + |
Preference number: 2 (lower is better) Translates to: LDPSLPSTCGMLSRVSGHGGRAW*QVHSNL Trigger: AAGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCC...GTGTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCTATGGAGGAAGAGCCTaGTGGCAAGTCCACTCCAAC | + |
Preference number: 2 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVYGGRA*WQVHSN Trigger: GTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATA...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR TCA 90 bp | GATCGGGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAAGCGGACACGGGCTGTaGGAAGTCAAGTTTCAGACT | + |
Preference number: 2 (lower is better) Translates to: DRGRPWTQVFLPPVECCLSGHGL*EVKFQT Trigger: AGTCTGAAACTTGACTTCTCACAGCCCGTGTCCGCT...TAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR GCA 90 bp | GGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGCTTCCACCTGTGGAATaGTGTCTAGGGTCAGCGGAC | + |
Preference number: 2 (lower is better) Translates to: GLNGRPQRRLKSLRIQRGLPPVE*CLGSAD Trigger: GTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAG...CCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR TCA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCAAGCGGACACGGGCTGTaGGAAGTCAAGTTTCAGACT | + |
Preference number: 2 (lower is better) Translates to: HLESKGGGKSKGPEAWVSSGHGL*EVKFQT Trigger: AGTCTGAAACTTGACTTCTCACAGCCCGTGTCCGCT...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR GCA 90 bp | GGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGCAGCTGGAAGTGTCCTaGACCTCCACTGCACTTACT | + |
Preference number: 2 (lower is better) Translates to: GLNGRPQRRLKSLRIQRGQLEVS*TSTALT Trigger: AGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTG...CCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | AATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAGGAGGAAGAGCCTGGTaGCAAGTCCACTCCAACCTT | + |
Preference number: 2 (lower is better) Translates to: NGRPQRRLKSLRIQRGREGGRAW*QVHSNL Trigger: AAGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCC...TTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCATATGGAGGAAGAGCCTaGTGGCAAGTCCACTCCAAC | + |
Preference number: 2 (lower is better) Translates to: HLESKGGGKSKGPEAWVSYGGRA*WQVHSN Trigger: GTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATA...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR GCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCCAGCTGGAAGTGTCCTaGACCTCCACTGCACTTACT | + |
Preference number: 2 (lower is better) Translates to: QRRLKSLRIQRGREIQGSQLEVS*TSTALT Trigger: AGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTG...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR GCA 90 bp | TGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGCTTCCACCTGTGGAATaGTGTCTAGGGTCAGCGGAC | + |
Preference number: 2 (lower is better) Translates to: CGLNGRPQRRLKSLRIQRLPPVE*CLGSAD Trigger: GTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAG...CCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCACTGTGTGGACTCTATaGAGGAAGAGCCTGGTGGCA | + |
Preference number: 2 (lower is better) Translates to: QRRLKSLRIQRGREIQGSTVWTL*RKSLVA Trigger: TGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGT...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCACTGCACTTACTGTGTaGACTCTATGGAGGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: QRRLKSLRIQRGREIQGSTALTV*TLWRKS Trigger: GCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGT...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR GCA 90 bp | ATTTGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAACAGCTGGAAGTGTCCTaGACCTCCACTGCACTTACT | + |
Preference number: 2 (lower is better) Translates to: ICGLNGRPQRRLKSLRIQQLEVS*TSTALT Trigger: AGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTG...TTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR-3UTR CCA 90 bp | ATTTGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAACTGCACTTACTGTGTaGACTCTATGGAGGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: ICGLNGRPQRRLKSLRIQTALTV*TLWRKS Trigger: GCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGT...TTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CCA 72 bp | TCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTaGGTGTCACTGGCAGGGATCGGGGACGACCTTGGA | + |
Preference number: 3 (lower is better) Translates to: SKGGGKSKGPEA*VSLAGIGDDLG Trigger: TCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR GCA 72 bp | CGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATaGTGTCTAGGGTCAGCGGACACGGGCTGTGAGAAG | + |
Preference number: 3 (lower is better) Translates to: RPWTQVFLPPVE*CLGSADTGCEK Trigger: CTTCTCACAGCCCGTGTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 72 bp | CTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTaGAGCTTGGGTGTCACTGGCAGGGATCGGGGACGA | + |
Preference number: 3 (lower is better) Translates to: LRIQRGREIQGS*SLGVTGRDRGR Trigger: TCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CCA 72 bp | TCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATaGAGGAAGAGCCTGGTGGCAAGTCCACTCCAACCT | + |
Preference number: 3 (lower is better) Translates to: SCTSTALTVWTL*RKSLVASPLQP Trigger: AGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CCA 72 bp | CTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTaGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCA | + |
Preference number: 3 (lower is better) Translates to: LEVSCTSTALTV*TLWRKSLVASP Trigger: TGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 72 bp | CTTCAGACCTCAGGGCCATTTCAGCTTGTGCATCAATaGCTTCCCAGCATCTCTGGGTCAGTTCAGGCTCCT | + |
Preference number: 3 (lower is better) Translates to: LQTSGPFQLVHQ*LPSISGSVQAP Trigger: AGGAGCCTGAACTGACCCAGAGATGCTGGGAAGTCATTGATGCACAAGCTGAAATGGCCCTGAGGTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223287.2 |
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3UTR GCA 72 bp | ATCAGTAAGGCAGCTGGAAGTGTCCTGCACCTCCACTaGACTTACTGTGTGGACTCTATGGAGGAAGAGCCT | + |
Preference number: 3 (lower is better) Translates to: ISKAAGSVLHLH*TYCVDSMEEEP Trigger: AGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTTACTGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 72 bp | TGTGGAATGCTGTCTAGGGTCAGCGGACACGGGCTGTaGGAAGTCAAGTTTCAGACTCTGGCTGATAGAGAA | + |
Preference number: 3 (lower is better) Translates to: CGMLSRVSGHGL*EVKFQTLADRE Trigger: TTCTCTATCAGCCAGAGTCTGAAACTTGACTTCTCACAGCCCGTGTCCGCTGACCCTAGACAGCATTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR TCA 72 bp | AGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTaGATGGTATCAGTAAGGCAGCTGGAAGTGTCCTGC | + |
Preference number: 3 (lower is better) Translates to: SFRLWLIEKAKP*MVSVRQLEVSC Trigger: GCAGGACACTTCCAGCTGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGGACCCAACATGCCTCTTGTTGTaGGGAGTGACTGGGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: RVLKLGCHWQGSGTTLDPTCLLL*GVTGRP Trigger: GGGCCTCCCAGTCACTCCTCACAACAAGAGGCATGT...TGGGTCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | GGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCCCTCCCTGGTCACAATaGTCTCCAGTGTCTGCCGGT | + |
Preference number: 4 (lower is better) Translates to: GNPRVLKLGCHWQGSGTTPPWSQ*SPVSAG Trigger: ACCGGCAGACACTGGAGATCATTGTGACCAGGGAGG...GGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | GAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACATGCCTCTTGTTGTaGGGAGTGACTGGGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: EGNPRVLKLGCHWQGSGTTCLLL*GVTGRP Trigger: GGGCCTCCCAGTCACTCCTCACAACAAGAGGCATGT...CGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCCCTGGGAAACGGCTCTaGGAGCACCAGCAGGGAGGT | + |
Preference number: 4 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVPGKRL*EHQQGG Trigger: ACCTCCCTGCTGGTGCTCGCAGAGCCGTTTCCCAGG...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS-3UTR TCA 90 bp | GAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGTCTTGTTGTGAGGAGTaGCTGGGAGGCCCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: EGNPRVLKLGCHWQGSGTSCCEE*LGGPVS Trigger: AGAGACAGGGCCTCCCAGTCACTCCTCACAACAAGA...CGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | GGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTCTTGTTGTGAGGAGTaGCTGGGAGGCCCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: GNPRVLKLGCHWQGSGTTSCCEE*LGGPVS Trigger: AGAGACAGGGCCTCCCAGTCACTCCTCACAACAAGA...GGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGGACCCAGGAATCTGTCCACCCTaGACTCCAGTCCCATTGGTA | + |
Preference number: 4 (lower is better) Translates to: RVLKLGCHWQGSGTTLDPGICPP*TPVPLV Trigger: TACCAATGGGACTGGAGTTCAGGGTGGACAGATTCC...TGGGTCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGGAAGACTGGAAGCGGTaGCACCTTTGTGGAGCAAGG | + |
Preference number: 4 (lower is better) Translates to: EGNPRVLKLGCHWQGSGTEDWKR*HLCGAR Trigger: CCTTGCTCCACAAAGGTGCCACCGCTTCCAGTCTTC...CGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCCCTCCCTGGTCACAATaGTCTCCAGTGTCTGCCGGT | + |
Preference number: 4 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVPPWSQ*SPVSAG Trigger: ACCGGCAGACACTGGAGATCATTGTGACCAGGGAGG...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCACTTCCCAGCATCTCTaGGTCAGTTCAGGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: GNPRVLKLGCHWQGSGTTTSQHL*VSSGSS Trigger: TGAGGAGCCTGAACTGACCCAGAGATGCTGGGAAGT...GGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGGACCCAGGGAATGTGGATTTCTaGCTTCACTTCCGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: RVLKLGCHWQGSGTTLDPGNVDF*LHFRKI Trigger: GATCTTGCGGAAGTGAAGTCAGAAATCCACATTCCC...TGGGTCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAACTTGGTGAGGTTCTaGGCCAGGACCATCCCTAGC | + |
Preference number: 4 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVNLVRF*ARTIPS Trigger: GCTAGGGATGGTCCTGGCTCAGAACCTCACCAAGTT...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | CACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTGTGTCCTGCTCCACCTaGACCGGGTGCTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: HCTYCVDSMEEEPGGKSTVSCST*TGCSNQ Trigger: CTGGTTTGAGCACCCGGTCCAGGTGGAGCAGGACAC...AGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGGAATCTGTCCACCCTaGACTCCAGTCCCATTGGTA | + |
Preference number: 4 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLGICPP*TPVPLV Trigger: TACCAATGGGACTGGAGTTCAGGGTGGACAGATTCC...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR GCA 90 bp | GGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCGGCCATTTCAGCTTGTaGATCAATGACTTCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GNPRVLKLGCHWQGSGTTGHFSL*INDFPA Trigger: TGCTGGGAAGTCATTGATGCACAAGCTGAAATGGCC...GGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR CCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCGAAGACTGGAAGCGGTaGCACCTTTGTGGAGCAAGG | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSEDWKR*HLCGAR Trigger: CCTTGCTCCACAAAGGTGCCACCGCTTCCAGTCTTC...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR CCA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCAGTGTCCTGCTCCACCTaGACCGGGTGCTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: HLESKGGGKSKGPEAWVSVSCST*TGCSNQ Trigger: CTGGTTTGAGCACCCGGTCCAGGTGGAGCAGGACAC...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTCTGAAACAAACTTGGTaGGGTTCTGAGCCAGGACCA | + |
Preference number: 4 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLLKQTW*GSEPGP Trigger: TGGTCCTGGCTCAGAACCTCACCAAGTTTGTTTCAG...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTCTGTCTCTTACATTCTaGCTCAGCCCAGTTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLLSLTF*LSPVQD Trigger: GTCCTGAACTGGGCTGAGGCAGAATGTAAGAGACAG...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR GCA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGCTACCTTCCCACACTaGACCTCTGTCATTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLATFPH*TSVIPS Trigger: AGAAGGAATGACAGAGGTGCAGTGTGGGAAGGTAGC...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR CCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCACTTCCCAGCATCTCTaGGTCAGTTCAGGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSTSQHL*VSSGSS Trigger: TGAGGAGCCTGAACTGACCCAGAGATGCTGGGAAGT...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | CACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTCAGCTTGTGCATCAATaGCTTCCCAGCATCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: HCTYCVDSMEEEPGGKSTQLVHQ*LPSISG Trigger: CCCAGAGATGCTGGGAAGTCATTGATGCACAAGCTG...AGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR TCA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCAAACTTGGTGAGGTTCTaGGCCAGGACCATCCCTAGC | + |
Preference number: 4 (lower is better) Translates to: HLESKGGGKSKGPEAWVSNLVRF*ARTIPS Trigger: GCTAGGGATGGTCCTGGCTCAGAACCTCACCAAGTT...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR TCA 90 bp | TGCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCACTGAAACAAACTTGGTaGGGTTCTGAGCCAGGACCA | + |
Preference number: 4 (lower is better) Translates to: CTSTALTVWTLWRKSLVALKQTW*GSEPGP Trigger: TGGTCCTGGCTCAGAACCTCACCAAGTTTGTTTCAG...TGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
||
CDS-3UTR TCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCCTGAAACAAACTTGGTaGGGTTCTGAGCCAGGACCA | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSLKQTW*GSEPGP Trigger: TGGTCCTGGCTCAGAACCTCACCAAGTTTGTTTCAG...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AAGGCAGCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATGGGAATCTGTCCACCCTaGACTCCAGTCCCATTGGTA | + |
Preference number: 4 (lower is better) Translates to: KAAGSVLHLHCTYCVDSMGICPP*TPVPLV Trigger: TACCAATGGGACTGGAGTTCAGGGTGGACAGATTCC...CATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCGGCCATTTCAGCTTGTaGATCAATGACTTCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVGHFSL*INDFPA Trigger: TGCTGGGAAGTCATTGATGCACAAGCTGAAATGGCC...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | TGCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCACTGTCTCTTACATTCTaGCTCAGCCCAGTTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: CTSTALTVWTLWRKSLVALSLTF*LSPVQD Trigger: GTCCTGAACTGGGCTGAGGCAGAATGTAAGAGACAG...TGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | CAGGTAGGGGACCATTGGAAGGTAACCACCCCATCCTTCCAGACCCAGCGCACATCCACATCGGGAATGTaGATTTCTGACTTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: QVGDHWKVTTPSFQTQRTSTSGM*ISDFTS Trigger: GGAAGTGAAGTCAGAAATCCACATTCCCGATGTGGA...TGTGCGCTGGGTCTGGAAGGATGGGGTGGTTACCTTCCAATGGTCCCCTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223368.2 |
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CDS-3UTR TCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTCTTGTTGTGAGGAGTaGCTGGGAGGCCCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSSCCEE*LGGPVS Trigger: AGAGACAGGGCCTCCCAGTCACTCCTCACAACAAGA...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCAACTTGGTGAGGTTCTaGGCCAGGACCATCCCTAGC | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSNLVRF*ARTIPS Trigger: GCTAGGGATGGTCCTGGCTCAGAACCTCACCAAGTT...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTAGACTGGGAAAGTGTTaGTGGATCCGTCTGAAACAA | + |
Preference number: 4 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLRLGKC*WIRLKQ Trigger: TTGTTTCAGACGGATCCAGCAACACTTTCCCAGTCT...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | AGTAAGGCAGCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTGCTACCTTCCCACACTaGACCTCTGTCATTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: SKAAGSVLHLHCTYCVDSATFPH*TSVIPS Trigger: AGAAGGAATGACAGAGGTGCAGTGTGGGAAGGTAGC...AGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGACTTCCCAGCATCTCTaGGTCAGTTCAGGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: GLNGRPQRRLKSLRIQRGTSQHL*VSSGSS Trigger: TGAGGAGCCTGAACTGACCCAGAGATGCTGGGAAGT...CCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGGTTGTGAGGAGTGACTaGGAGGCCCTGTCTCTTACA | + |
Preference number: 4 (lower is better) Translates to: GLNGRPQRRLKSLRIQRGVVRSD*EALSLT Trigger: TGTAAGAGACAGGGCCTCCCAGTCACTCCTCACAAC...CCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | AAGGCAGCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATGCAAGGAGGGGCTTTTTaGCAGCAGTGTACCAAAGGA | + |
Preference number: 4 (lower is better) Translates to: KAAGSVLHLHCTYCVDSMQGGAF*QQCTKG Trigger: TCCTTTGGTACACTGCTGCCAAAAAGCCCCTCCTTG...CATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGCTGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCCTGGGAAAGTGTTGCTaGATCCGTCTGAAACAAACT | + |
Preference number: 4 (lower is better) Translates to: GTTLDPSLPSTCGMLSRVLGKCC*IRLKQT Trigger: AGTTTGTTTCAGACGGATCCAGCAACACTTTCCCAG...GACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | CACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTGGGAATGTGGATTTCTaGCTTCACTTCCGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: HCTYCVDSMEEEPGGKSTGNVDF*LHFRKI Trigger: GATCTTGCGGAAGTGAAGTCAGAAATCCACATTCCC...AGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | CACAACCTCTGGGGTTGTAGCAAACAGGTAGGGGACCATTGGAAGGTAACCACCGGGAATGTGGATTTCTaGCTTCACTTCCGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: HNLWGCSKQVGDHWKVTTGNVDF*LHFRKI Trigger: GATCTTGCGGAAGTGAAGTCAGAAATCCACATTCCC...GGTGGTTACCTTCCAATGGTCCCCTACCTGTTTGCTACAACCCCAGAGGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223368.2 |
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CDS-3UTR GCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCATGATCTCCAGTGTCTaGCGGTCAATTTCACAGAAG | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSMISSV*RSISQK Trigger: CTTCTGTGAAATTGACCGGCAGACACTGGAGATCAT...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGTCTCTTACATTCTaGCTCAGCCCAGTTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: HLESKGGGKSKGPEAWVSLSLTF*LSPVQD Trigger: GTCCTGAACTGGGCTGAGGCAGAATGTAAGAGACAG...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | GATCGGGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAAGACTGGGAAAGTGTTaGTGGATCCGTCTGAAACAA | + |
Preference number: 4 (lower is better) Translates to: DRGRPWTQVFLPPVECCLRLGKC*WIRLKQ Trigger: TTGTTTCAGACGGATCCAGCAACACTTTCCCAGTCT...TAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCTCCACATCGGGAATGTaGATTTCTGACTTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSSTSGM*ISDFTS Trigger: GGAAGTGAAGTCAGAAATCCACATTCCCGATGTGGA...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCCTGGGAAAGTGTTGCTaGATCCGTCTGAAACAAACT | + |
Preference number: 4 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSLGKCC*IRLKQT Trigger: AGTTTGTTTCAGACGGATCCAGCAACACTTTCCCAG...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | ATTTGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAGTGTCCTGCTCCACCTaGACCGGGTGCTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: ICGLNGRPQRRLKSLRIQVSCST*TGCSNQ Trigger: CTGGTTTGAGCACCCGGTCCAGGTGGAGCAGGACAC...TTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAATAGAAGATGAGCTCTaGAATCTGTCCACCCTGAAC | + |
Preference number: 4 (lower is better) Translates to: APPLHLLCGLYGGRAWWQIEDEL*NLSTLN Trigger: GTTCAGGGTGGACAGATTCCAGAGCTCATCTTCTAT...TTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | ATTTGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAACATGCCTCTTGTTGTaGGGAGTGACTGGGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: ICGLNGRPQRRLKSLRIQTCLLL*GVTGRP Trigger: GGGCCTCCCAGTCACTCCTCACAACAAGAGGCATGT...TTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAATCCACATCGGGAATGTaGATTTCTGACTTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: AGSVLHLHCTYCVDSMEESTSGM*ISDFTS Trigger: GGAAGTGAAGTCAGAAATCCACATTCCCGATGTGGA...TTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCCAAGGAGGGGCTTTTTaGCAGCAGTGTACCAAAGGA | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSQGGAF*QQCTKG Trigger: TCCTTTGGTACACTGCTGCCAAAAAGCCCCTCCTTG...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCGGGAATGTGGATTTCTaGCTTCACTTCCGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSGNVDF*LHFRKI Trigger: GATCTTGCGGAAGTGAAGTCAGAAATCCACATTCCC...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR TCA 90 bp | AAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGCCTCCCTGGTCACAATaGTCTCCAGTGTCTGCCGGT | + |
Preference number: 4 (lower is better) Translates to: KFQTLADRESQALNGISKPPWSQ*SPVSAG Trigger: ACCGGCAGACACTGGAGATCATTGTGACCAGGGAGG...CTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | GCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAAGGACACAAGCATTTTTaGCTTCCAGACTTGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: AGSVLHLHCTYCVDSMEEGHKHF*LPDLFP Trigger: TGGAAACAAGTCTGGAAGCCAAAAATGCTTGTGTCC...TTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | AATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAATCCACATCGGGAATGTaGATTTCTGACTTCACTTCC | + |
Preference number: 4 (lower is better) Translates to: NGRPQRRLKSLRIQRGRESTSGM*ISDFTS Trigger: GGAAGTGAAGTCAGAAATCCACATTCCCGATGTGGA...TTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | TTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGGCAGTTGTGAGGAGTGACTaGGAGGCCCTGTCTCTTACA | + |
Preference number: 4 (lower is better) Translates to: FQTLADRESQALNGISKAVVRSD*EALSLT Trigger: TGTAAGAGACAGGGCCTCCCAGTCACTCCTCACAAC...TGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | AAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGGAAGACTGGAAGCGGTaGCACCTTTGTGGAGCAAGG | + |
Preference number: 4 (lower is better) Translates to: KFQTLADRESQALNGISKEDWKR*HLCGAR Trigger: CCTTGCTCCACAAAGGTGCCACCGCTTCCAGTCTTC...CTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCCTGGGAAAGTGTTGCTaGATCCGTCTGAAACAAACT | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSLGKCC*IRLKQT Trigger: AGTTTGTTTCAGACGGATCCAGCAACACTTTCCCAG...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCATAGAAGATGAGCTCTaGAATCTGTCCACCCTGAAC | + |
Preference number: 4 (lower is better) Translates to: QRRLKSLRIQRGREIQGSIEDEL*NLSTLN Trigger: GTTCAGGGTGGACAGATTCCAGAGCTCATCTTCTAT...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | TTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGGCACAAGGAGGGGCTTTTTaGCAGCAGTGTACCAAAGGA | + |
Preference number: 4 (lower is better) Translates to: FQTLADRESQALNGISKAQGGAF*QQCTKG Trigger: TCCTTTGGTACACTGCTGCCAAAAAGCCCCTCCTTG...TGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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3UTR CAA 72 bp | AAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTaGAATGGTATCAGTAAGGCAGCTGGAAGTGTCCTG | + |
Preference number: 4 (lower is better) Translates to: KFQTLADRESQA*NGISKAAGSVL Trigger: CAGGACACTTCCAGCTGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR GCA 90 bp | TTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGGCAGGCCATTTCAGCTTGTaGATCAATGACTTCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: FQTLADRESQALNGISKAGHFSL*INDFPA Trigger: TGCTGGGAAGTCATTGATGCACAAGCTGAAATGGCC...TGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CCA 90 bp | AAGTTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGATAGAAGATGAGCTCTaGAATCTGTCCACCCTGAAC | + |
Preference number: 4 (lower is better) Translates to: KFQTLADRESQALNGISKIEDEL*NLSTLN Trigger: GTTCAGGGTGGACAGATTCCAGAGCTCATCTTCTAT...CTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS GCA 90 bp | AGAGGGACTGGCGGGCGGGTACAGTTCCGCGGCCATCTTCGCTACTaGCGGGGCGGGCTCCGCACTGGTCGGTGCTGCGCCGCGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: RGTGGRVQFRGHLRY*RGGLRTGRCCAARL Trigger: AAGGCGCGCGGCGCAGCACCGACCAGTGCGGAGCCCGCCCCGGCAGTAGCGAAGATGGCCGCGGAACTGTACCCGCCCGCCAGTCCCTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS CCA 90 bp | CACTGGTCGGTGCTGCGCCGCGCGCCTTCGCGCCGCGACGGGGCCTaGGAAACGGCTCTGCGAGCACCAGCAGGGAGGTTAGGCACTGCG | + |
Preference number: 5 (lower is better) Translates to: HWSVLRRAPSRRDGA*ETALRAPAGRLGTA Trigger: CGCAGTGCCTAACCTCCCTGCTGGTGCTCGCAGAGCCGTTTCCCAGGCCCCGTCGCGGCGCGAAGGCGCGCGGCGCAGCACCGACCAGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS GCA 90 bp | GGCTGCGCCTGCCGCGTTGCTGTTGGCGATGTCGGTGGCAGTAGCTaGAGAGGGACTGGCGGGCGGGTACAGTTCCGCGGCCATCTTCGC | + |
Preference number: 5 (lower is better) Translates to: GCACRVAVGDVGGSS*RGTGGRVQFRGHLR Trigger: GCGAAGATGGCCGCGGAACTGTACCCGCCCGCCAGTCCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS GCA 90 bp | GCAGGGCGGGCAGCAAAGCCCGACCTTCGTGCTCTCGGCTGCGCCTaGCGCGTTGCTGTTGGCGATGTCGGTGGCAGTAGCTGCAGAGGG | + |
Preference number: 5 (lower is better) Translates to: AGRAAKPDLRALGCA*RVAVGDVGGSSCRG Trigger: CCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGCCCGCCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 90 bp | TGCCAGGCAGGGCGGGCAGCAAAGCCCGACCTTCGTGCTCTCGGCTaGGCCTGCCGCGTTGCTGTTGGCGATGTCGGTGGCAGTAGCTGC | + |
Preference number: 5 (lower is better) Translates to: CQAGRAAKPDLRALG*ACRVAVGDVGGSSC Trigger: GCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGCCCGCCCTGCCTGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 90 bp | GCCGACAGCCAAGACATACTCTCGCGCAGCGTAGGATGGAAGGACTaGCAGTTGGGGCTCTCGGGATTGTTGTTGTCTGGCAAGGGCGGC | + |
Preference number: 5 (lower is better) Translates to: ADSQDILSRSVGWKD*QLGLSGLLLSGKGG Trigger: GCCGCCCTTGCCAGACAACAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCATCCTACGCTGCGCGAGAGTATGTCTTGGCTGTCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS-3UTR CAA 90 bp | AGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTGGACCCAACAGCCTCCTTGGTATaGAGGGCCTCCCTGGTCACA | + |
Preference number: 5 (lower is better) Translates to: RVLKLGCHWQGSGTTLDPTASLV*RASLVT Trigger: TGTGACCAGGGAGGCCCTCAATACCAAGGAGGCTGT...TGGGTCCAAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | GATCGGGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAAAGTTGACGCAGGCCTaGGCCAGGGCAGGCACGATG | + |
Preference number: 5 (lower is better) Translates to: DRGRPWTQVFLPPVECCLKLTQA*ARAGTM Trigger: CATCGTGCCTGCCCTGGCCAAGGCCTGCGTCAACTT...TAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | TTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCGGACACACAGCCAAGACATACTaGTGGGCGGGCACACGCCTG | + |
Preference number: 5 (lower is better) Translates to: LDPSLPSTCGMLSRVSGHTAKTY*WAGTRL Trigger: CAGGCGTGTGCCCGCCCACAAGTATGTCTTGGCTGT...GTGTCCGCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | GCTGGAAGTGTCCTGCACCTCCACTGCACTTACTGTGTGGACTCTATGGAGGAAAAGTTGACGCAGGCCTaGGCCAGGGCAGGCACGATG | + |
Preference number: 5 (lower is better) Translates to: AGSVLHLHCTYCVDSMEEKLTQA*ARAGTM Trigger: CATCGTGCCTGCCCTGGCCAAGGCCTGCGTCAACTT...TTCCTCCATAGAGTCCACACAGTAAGTGCAGTGGAGGTGCAGGACACTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | TGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTCCAACCTTACGCTGGAAGGACTGCCAGTaGGGGCTCTCGGGATTGTTG | + |
Preference number: 5 (lower is better) Translates to: CVDSMEEEPGGKSTPTLRWKDCQ*GLSGLL Trigger: CAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCA...GCGTAAGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | CACAACCTCTGGGGTTGTAGCAAACAGGTAGGGGACCATTGGAAGGTAACCACCACAGCCAAGACATACTaGTGGGCGGGCACACGCCTG | + |
Preference number: 5 (lower is better) Translates to: HNLWGCSKQVGDHWKVTTTAKTY*WAGTRL Trigger: CAGGCGTGTGCCCGCCCACAAGTATGTCTTGGCTGT...GGTGGTTACCTTCCAATGGTCCCCTACCTGTTTGCTACAACCCCAGAGGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223368.2 |
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CDS-3UTR CAA 90 bp | ACCCAGCGCACAGCACTTACTTTAGCAAGACCAAGAAGGCAGCAGGCTCCACATTGGAAGGACTGCCAGTaGGGGCTCTCGGGATTGTTG | + |
Preference number: 5 (lower is better) Translates to: TQRTALTLARPRRQQAPHWKDCQ*GLSGLL Trigger: CAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCA...ATGTGGAGCCTGCTGCCTTCTTGGTCTTGCTAAAGTAAGTGCTGTGCGCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222209.2 |
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CDS-3UTR CAA 90 bp | CACAACCTCTGGGGTTGTAGCAAACAGGTAGGGGACCATTGGAAGGTAACCACCTGGAAGGACTGCCAGTaGGGGCTCTCGGGATTGTTG | + |
Preference number: 5 (lower is better) Translates to: HNLWGCSKQVGDHWKVTTWKDCQ*GLSGLL Trigger: CAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCA...GGTGGTTACCTTCCAATGGTCCCCTACCTGTTTGCTACAACCCCAGAGGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000222209.2 ENSMUST00000223368.2 |
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CDS-3UTR CAA 90 bp | CAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCAAGTTGACGCAGGCCTaGGCCAGGGCAGGCACGATG | + |
Preference number: 5 (lower is better) Translates to: QRRLKSLRIQRGREIQGSKLTQA*ARAGTM Trigger: CATCGTGCCTGCCCTGGCCAAGGCCTGCGTCAACTT...GGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | CACTGCACTTACTGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTACAGCCTCCTTGGTATaGAGGGCCTCCCTGGTCACA | + |
Preference number: 5 (lower is better) Translates to: HCTYCVDSMEEEPGGKSTTASLV*RASLVT Trigger: TGTGACCAGGGAGGCCCTCAATACCAAGGAGGCTGT...AGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACAGTAAGTGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | CACTTAGAATCCAAAGGGGGAGGGAAATCCAAGGGTCCTGAAGCTTGGGTGTCATGGAAGGACTGCCAGTaGGGGCTCTCGGGATTGTTG | + |
Preference number: 5 (lower is better) Translates to: HLESKGGGKSKGPEAWVSWKDCQ*GLSGLL Trigger: CAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCA...TGACACCCAAGCTTCAGGACCCTTGGATTTCCCTCCCCCTTTGGATTCTAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | AAATCCAAGGGTCCTGAAGCTTGGGTGTCACTGGCAGGGATCGGGGACGACCTTCAGGGCCATTTCAGCTaGTGCATCAATGACTTCCCA | + |
Preference number: 5 (lower is better) Translates to: KSKGPEAWVSLAGIGDDLQGHFS*CINDFP Trigger: TGGGAAGTCATTGATGCACAAGCTGAAATGGCCCTG...AAGGTCGTCCCCGATCCCTGCCAGTGACACCCAAGCTTCAGGACCCTTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | TTTAGCAAGACCAAGAAGGCAGCAGGCTCCACATCGGGAATGTGGATTTCTGACTGGAAGGACTGCCAGTaGGGGCTCTCGGGATTGTTG | + |
Preference number: 5 (lower is better) Translates to: FSKTKKAAGSTSGMWISDWKDCQ*GLSGLL Trigger: CAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCA...GTCAGAAATCCACATTCCCGATGTGGAGCCTGCTGCCTTCTTGGTCTTGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS-3UTR CAA 90 bp | TGTGTGGACTCTATGGAGGAAGAGCCTGGTGGCAAGTCCACTCCAACCTTACGCCAGGGCCATTTCAGCTaGTGCATCAATGACTTCCCA | + |
Preference number: 5 (lower is better) Translates to: CVDSMEEEPGGKSTPTLRQGHFS*CINDFP Trigger: TGGGAAGTCATTGATGCACAAGCTGAAATGGCCCTG...GCGTAAGGTTGGAGTGGACTTGCCACCAGGCTCTTCCTCCATAGAGTCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | TTTCAGACTCTGGCTGATAGAGAAAGCCAAGCCTTGAATGGTATCAGTAAGGCAACAGCCAAGACATACTaGTGGGCGGGCACACGCCTG | + |
Preference number: 5 (lower is better) Translates to: FQTLADRESQALNGISKATAKTY*WAGTRL Trigger: CAGGCGTGTGCCCGCCCACAAGTATGTCTTGGCTGT...TGCCTTACTGATACCATTCAAGGCTTGGCTTTCTCTATCAGCCAGAGTCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | ACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAGGGTCAGCAGGACACAAGCATTTTaGGCTTCCAGACTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: TTLDPSLPSTCGMLSRVSRTQAF*ASRLVS Trigger: GGAAACAAGTCTGGAAGCCAAAAATGCTTGTGTCCT...GCTGACCCTAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | GATCGGGGACGACCTTGGACCCAAGTCTTCCTTCCACCTGTGGAATGCTGTCTAAGGACACAAGCATTTTaGGCTTCCAGACTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: DRGRPWTQVFLPPVECCLRTQAF*ASRLVS Trigger: GGAAACAAGTCTGGAAGCCAAAAATGCTTGTGTCCT...TAGACAGCATTCCACAGGTGGAAGGAAGACTTGGGTCCAAGGTCGTCCCCGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | AATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAAAGGGGGAGGGAAAGGACACAAGCATTTTaGGCTTCCAGACTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: NGRPQRRLKSLRIQRGRERTQAF*ASRLVS Trigger: GGAAACAAGTCTGGAAGCCAAAAATGCTTGTGTCCT...TTCCCTCCCCCTTTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS-3UTR CAA 90 bp | ATTTGTGGCTTGAATGGGAGGCCTCAACGTAGGCTGAAATCACTTAGAATCCAACAGGGCCATTTCAGCTaGTGCATCAATGACTTCCCA | + |
Preference number: 5 (lower is better) Translates to: ICGLNGRPQRRLKSLRIQQGHFS*CINDFP Trigger: TGGGAAGTCATTGATGCACAAGCTGAAATGGCCCTG...TTGGATTCTAAGTGATTTCAGCCTACGTTGAGGCCTCCCATTCAAGCCACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 |
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CDS CCA 72 bp | CGGCCATCTTCGCTACTGCCGGGGCGGGCTCCGCACTaGTCGGTGCTGCGCCGCGCGCCTTCGCGCCGCGAC | + |
Preference number: 6 (lower is better) Translates to: RPSSLLPGRAPH*SVLRRAPSRRD Trigger: GTCGCGGCGCGAAGGCGCGCGGCGCAGCACCGACCAGTGCGGAGCCCGCCCCGGCAGTAGCGAAGATGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS GCA 72 bp | GGCGGGCGGGTACAGTTCCGCGGCCATCTTCGCTACTaGCGGGGCGGGCTCCGCACTGGTCGGTGCTGCGCC | + |
Preference number: 6 (lower is better) Translates to: GGRVQFRGHLRY*RGGLRTGRCCA Trigger: GGCGCAGCACCGACCAGTGCGGAGCCCGCCCCGGCAGTAGCGAAGATGGCCGCGGAACTGTACCCGCCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS CCA 72 bp | GTGCTGCGCCGCGCGCCTTCGCGCCGCGACGGGGCCTaGGAAACGGCTCTGCGAGCACCAGCAGGGAGGTTA | + |
Preference number: 6 (lower is better) Translates to: VLRRAPSRRDGA*ETALRAPAGRL Trigger: TAACCTCCCTGCTGGTGCTCGCAGAGCCGTTTCCCAGGCCCCGTCGCGGCGCGAAGGCGCGCGGCGCAGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002880.7 |
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CDS GCA 72 bp | GGGCGGGCAGCAAAGCCCGACCTTCGTGCTCTCGGCTaGGCCTGCCGCGTTGCTGTTGGCGATGTCGGTGGC | + |
Preference number: 6 (lower is better) Translates to: GRAAKPDLRALG*ACRVAVGDVGG Trigger: GCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGCCCGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 72 bp | GTGCCAGGCAGGGCGGGCAGCAAAGCCCGACCTTCGTaGTCTCGGCTGCGCCTGCCGCGTTGCTGTTGGCGA | + |
Preference number: 6 (lower is better) Translates to: VPGRAGSKARPS*SRLRLPRCCWR Trigger: TCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGCCCGCCCTGCCTGGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS CAA 90 bp | CAAAGCCCGACCTTCGTGCTCTCGGCTGCGCCTGCCGCGTTGCTGTaGGCGATGTCGGTGGCAGTAGCTGCAGAGGGACTGGCGGGCGGG | + |
Preference number: 6 (lower is better) Translates to: QSPTFVLSAAPAALL*AMSVAVAAEGLAGG Trigger: CCCGCCCGCCAGTCCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS CAA 90 bp | GGGCAGCAAAGCCCGACCTTCGTGCTCTCGGCTGCGCCTGCCGCGTaGCTGTTGGCGATGTCGGTGGCAGTAGCTGCAGAGGGACTGGCG | + |
Preference number: 6 (lower is better) Translates to: GQQSPTFVLSAAPAA*LLAMSVAVAAEGLA Trigger: CGCCAGTCCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 72 bp | TGCCGCGTTGCTGTTGGCGATGTCGGTGGCAGTAGCTaGAGAGGGACTGGCGGGCGGGTACAGTTCCGCGGC | + |
Preference number: 6 (lower is better) Translates to: CRVAVGDVGGSS*RGTGGRVQFRG Trigger: GCCGCGGAACTGTACCCGCCCGCCAGTCCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 72 bp | GCAGCAAAGCCCGACCTTCGTGCTCTCGGCTGCGCCTaGCGCGTTGCTGTTGGCGATGTCGGTGGCAGTAGC | + |
Preference number: 6 (lower is better) Translates to: AAKPDLRALGCA*RVAVGDVGGSS Trigger: GCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGTCGGGCTTTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS CAA 72 bp | ACCTTCGTGCTCTCGGCTGCGCCTGCCGCGTTGCTGTaGGCGATGTCGGTGGCAGTAGCTGCAGAGGGACTG | + |
Preference number: 6 (lower is better) Translates to: TFVLSAAPAALL*AMSVAVAAEGL Trigger: CAGTCCCTCTGCAGCTACTGCCACCGACATCGCCAACAGCAACGCGGCAGGCGCAGCCGAGAGCACGAAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002880.7 ENSMUST00000165079.8 ENSMUST00000221104.2 ENSMUST00000221500.2 ENSMUST00000222209.2 ENSMUST00000223287.2 |
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CDS GCA 72 bp | CAAGACATACTCTCGCGCAGCGTAGGATGGAAGGACTaGCAGTTGGGGCTCTCGGGATTGTTGTTGTCTGGC | + |
Preference number: 6 (lower is better) Translates to: QDILSRSVGWKD*QLGLSGLLLSG Trigger: GCCAGACAACAACAATCCCGAGAGCCCCAACTGGCAGTCCTTCCATCCTACGCTGCGCGAGAGTATGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222209.2 ENSMUST00000223287.2 |