Pregenerated sensors for BTBD35F8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000118438

Ensembl transcript IDs: ENSMUST00000238270.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	ACTTCTGGTGGTACTAGACTCCAAAGAATATTGAATTTGTTTTTGGTCTTCTTCAGATTTATAACACCATaGCGTGATTCTCTCCAAGTA	+
Preference number: 4 (lower is better) Translates to: TSGGTRLQRILNLFLVFFRFITP*RDSLQV Trigger: TACTTGGAGAGAATCACGCCATGGTGTTATAAATCT...GAAGAAGACCAAAAACAAATTCAATATTCTTTGGAGTCTAGTACCACCAGAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238270.2
CDS TCA 90 bp	ACAGTGTTCCTGTTGATAGTTTCTTTCATGATTCCTTCACACTGCTaGATTACTCGATCCACCCGAAGCAGGCATGCTGCTGCCAAAACT	+
Preference number: 5 (lower is better) Translates to: TVFLLIVSFMIPSHC*ITRSTRSRHAAAKT Trigger: AGTTTTGGCAGCAGCATGCCTGCTTCGGGTGGATCGAGTAATTCAGCAGTGTGAAGGAATCATGAAAGAAACTATCAACAGGAACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238270.2
CDS CCA 72 bp	ATATCCTCATTCTTAATGATCAGATTTATAACACCATaGCGTGATTCTCTCCAAGTACCTTTGAGAATGTTA	+
Preference number: 6 (lower is better) Translates to: ISSFLMIRFITP*RDSLQVPLRML Trigger: TAACATTCTCAAAGGTACTTGGAGAGAATCACGCCATGGTGTTATAAATCTGATCATTAAGAATGAGGATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238270.2

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