Pregenerated sensors for BTBD35F4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078213

Ensembl transcript IDs: ENSMUST00000105011.4

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGGATACATTCGCTGGTTTTGAGGTCCATGAACATTAGAACTTGTTaGCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCGACTGCCAGG	+
Preference number: 5 (lower is better) Translates to: WIHSLVLRSMNIRTC*QLLQTVSFSLATAR Trigger: CCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAAGTTCTAATGTTCATGGACCTCAAAACCAGCGAATGTATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105011.4
CDS GCA 90 bp	GTTATTGACAAATCCGCATCCGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATTCTTAATGATCAGATTTATAACA	+
Preference number: 5 (lower is better) Translates to: VIDKSASVYKAPNTK*RDRVSIFLMIRFIT Trigger: TGTTATAAATCTGATCATTAAGAATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACGGATGCGGATTTGTCAATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105011.4
CDS TCA 72 bp	CGATCCACCCGAAGCAGGCATGCTGCTGCCAAAACTTaGGGAACTTCCAGAGGTGTTATTGACAAATCCGCA	+
Preference number: 6 (lower is better) Translates to: RSTRSRHAAAKT*GTSRGVIDKSA Trigger: TGCGGATTTGTCAATAACACCTCTGGAAGTTCCTCAAGTTTTGGCAGCAGCATGCCTGCTTCGGGTGGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105011.4
CDS TCA 72 bp	TGCTGCCAAAACTTGAGGAACTTCCAGAGGTGTTATTaGCAAATCCGCATCCGTGTACAAAGCACCAAACAC	+
Preference number: 6 (lower is better) Translates to: CCQNLRNFQRCY*QIRIRVQSTKH Trigger: GTGTTTGGTGCTTTGTACACGGATGCGGATTTGTCAATAACACCTCTGGAAGTTCCTCAAGTTTTGGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105011.4
CDS TCA 72 bp	TTTTTAGTGTGGTATATACATCAATCTCCTTTTGCATaGCTAGTAAGTCAGAAGACAGTGCTAGAAGATACA	+
Preference number: 6 (lower is better) Translates to: FLVWYIHQSPFA*LVSQKTVLEDT Trigger: TGTATCTTCTAGCACTGTCTTCTGACTTACTAGTCATGCAAAAGGAGATTGATGTATATACCACACTAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105011.4

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