Pregenerated sensors for BTBD35F3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078218

Ensembl transcript IDs: ENSMUST00000140300.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	TCGCTGGTTTTGAGGTCCATGAACATTAGAACTTGTTaGCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCG	+
Preference number: 6 (lower is better) Translates to: SLVLRSMNIRTC*QLLQTVSFSLA Trigger: CGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAAGTTCTAATGTTCATGGACCTCAAAACCAGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140300.2
CDS GCA 72 bp	CCTTGTAAAGTGCCACACTTGGATGTACCATCAAATTaGAAAGAAGCCATTCAAAGCATCTCGTCTTTACTG	+
Preference number: 6 (lower is better) Translates to: PCKVPHLDVPSN*KEAIQSISSLL Trigger: CAGTAAAGACGAGATGCTTTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140300.2
CDS CAA 72 bp	GTAGTTGAGAACTTGATGTGGATACATTCGCTGGTTTaGAGGTCCATGAACATTAGAACTTGTTGCCAACTC	+
Preference number: 6 (lower is better) Translates to: VVENLMWIHSLV*RSMNIRTCCQL Trigger: GAGTTGGCAACAAGTTCTAATGTTCATGGACCTCAAAACCAGCGAATGTATCCACATCAAGTTCTCAACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140300.2
CDS GCA 72 bp	AAATCCGCATCCGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATTCTTAATGATCAGA	+
Preference number: 6 (lower is better) Translates to: KSASVYKAPNTK*RDRVSIFLMIR Trigger: TCTGATCATTAAGAATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACGGATGCGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140300.2

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