Pregenerated sensors for BTBD35F27 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094860

Ensembl transcript IDs: ENSMUST00000178143.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GTTATTGACAAATCCGCATCCGTATACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATGATCAGATTT	+
Preference number: 5 (lower is better) Translates to: VIDKSASVYKAPNTK*RDRVSISSFLMIRF Trigger: AAATCTGATCATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTATACGGATGCGGATTTGTCAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS GCA 72 bp	ACACTGCTGAATTACTCGATCCACCCGAAGCAGGCATaGTGCTGCCAAAACTTGAGGAACTTCCAGAGGTGT	+
Preference number: 6 (lower is better) Translates to: TLLNYSIHPKQA*CCQNLRNFQRC Trigger: ACACCTCTGGAAGTTCCTCAAGTTTTGGCAGCAGCATGCCTGCTTCGGGTGGATCGAGTAATTCAGCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS CCA 72 bp	TGTTTCTTTTTAGCTTGCGACTGCCAGGAATGTAGCTaGCTCCGGCTATGGCTTCTGGCTGTGGCTCTAACA	+
Preference number: 6 (lower is better) Translates to: CFFLACDCQECS*LRLWLLAVALT Trigger: TGTTAGAGCCACAGCCAGAAGCCATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCTAAAAAGAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS TCA 72 bp	TGCTGCCAAAACTTGAGGAACTTCCAGAGGTGTTATTaGCAAATCCGCATCCGTATACAAAGCACCAAACAC	+
Preference number: 6 (lower is better) Translates to: CCQNLRNFQRCY*QIRIRIQSTKH Trigger: GTGTTTGGTGCTTTGTATACGGATGCGGATTTGTCAATAACACCTCTGGAAGTTCCTCAAGTTTTGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS GCA 72 bp	TTCTTCACTTTCAAGAAAACTGATGTTATCAACATATaGCATGTGGGTGGAAAGCCAGTTGTTTGCGTGTTG	+
Preference number: 6 (lower is better) Translates to: FFTFKKTDVINI*HVGGKPVVCVL Trigger: CAACACGCAAACAACTGGCTTTCCACCCACATGGCATATGTTGATAACATCAGTTTTCTTGAAAGTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS GCA 72 bp	AAATCCGCATCCGTATACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATG	+
Preference number: 6 (lower is better) Translates to: KSASVYKAPNTK*RDRVSISSFLM Trigger: CATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTATACGGATGCGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178143.2
CDS GCA 72 bp	CATATTTTTAGTGTGGTATATACATCAATCTCCTTTTaGATGACTAGTAAGTCAGAAGACAGTGCTAGAAGA	+
Preference number: 6 (lower is better) Translates to: HIFSVVYTSISF*MTSKSEDSARR Trigger: TCTTCTAGCACTGTCTTCTGACTTACTAGTCATGCAAAAGGAGATTGATGTATATACCACACTAAAAATATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178143.2