Pregenerated sensors for BTBD35F20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094596

Ensembl transcript IDs: ENSMUST00000179325.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 72 bp	ACTTCTGGTGGTACTAGACTCCAAAGAATATTGAATTaGTTTTTGGTCTTCTTCACTGTAGTCATTACACAG	+
Preference number: 4 (lower is better) Translates to: TSGGTRLQRILN*FLVFFTVVITQ Trigger: CTGTGTAATGACTACAGTGAAGAAGACCAAAAACAAATTCAATATTCTTTGGAGTCTAGTACCACCAGAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179325.2
CDS CCA 90 bp	TTCTTTTTCGCTTGCGACTGCCAGGAATGTAGCTGGCTCCGGCTATaGCTTCTGGCTGTGGCTGTAACAGACTGGAATCCCTGCATCTCA	+
Preference number: 5 (lower is better) Translates to: FFFACDCQECSWLRL*LLAVAVTDWNPCIS Trigger: TGAGATGCAGGGATTCCAGTCTGTTACAGCCACAGCCAGAAGCCATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179325.2
CDS CCA 90 bp	CCTTCTTCACTTTCAAGAAAACTGATGTTATCAACATATGCCATGTaGGTGGAAAGCCAGTTGTTTGCGTGTTGTAAAAGCTGTTTCAAG	+
Preference number: 5 (lower is better) Translates to: PSSLSRKLMLSTYAM*VESQLFACCKSCFK Trigger: CTTGAAACAGCTTTTACAACACGCAAACAACTGGCTTTCCACCCACATGGCATATGTTGATAACATCAGTTTTCTTGAAAGTGAAGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179325.2
CDS GCA 90 bp	AGTCTACTTCCTTGTAAAGTGCCACACTTGGATGTACCATCAAATTaGAAAGAAGCCATTCAAAGCATCTCATCTTTACAGCTTTTAATC	+
Preference number: 5 (lower is better) Translates to: SLLPCKVPHLDVPSN*KEAIQSISSLQLLI Trigger: GATTAAAAGCTGTAAAGATGAGATGCTTTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGGAAGTAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179325.2
CDS GCA 72 bp	AAATCCGCATCCGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATG	+
Preference number: 6 (lower is better) Translates to: KSASVYKAPNTK*RDRVSISSFLM Trigger: CATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACGGATGCGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179325.2

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