Pregenerated sensors for BTBD35F2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096194

Ensembl transcript IDs: ENSMUST00000179991.3

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCGACTaGCAGGAATGTAGCTGGCTCCGGCTATGTCTTCTG	+
Preference number: 6 (lower is better) Translates to: PTPPNCFFFACD*QECSWLRLCLL Trigger: CAGAAGACATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179991.3
CDS GCA 72 bp	TTGTTGCCAACTCCTCCAAACTGTTTCTTTTTCGCTTaGGACTGCCAGGAATGTAGCTGGCTCCGGCTATGT	+
Preference number: 6 (lower is better) Translates to: LLPTPPNCFFFA*DCQECSWLRLC Trigger: ACATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179991.3
CDS CAA 72 bp	GATCTTAACCTTTTTCCAGTAGATGTAGTTGAGAACTaGATGTGGATACATTCCCTGGTTTTGAGGTCCATG	+
Preference number: 6 (lower is better) Translates to: DLNLFPVDVVEN*MWIHSLVLRSM Trigger: CATGGACCTCAAAACCAGGGAATGTATCCACATCAAGTTCTCAACTACATCTACTGGAAAAAGGTTAAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179991.3
CDS CCA 72 bp	AACCTTTTTCCAGTAGATGTAGTTGAGAACTTGATGTaGATACATTCCCTGGTTTTGAGGTCCATGAACATT	+
Preference number: 6 (lower is better) Translates to: NLFPVDVVENLM*IHSLVLRSMNI Trigger: AATGTTCATGGACCTCAAAACCAGGGAATGTATCCACATCAAGTTCTCAACTACATCTACTGGAAAAAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179991.3

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