Pregenerated sensors for BTBD35F19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000118465

Ensembl transcript IDs: ENSMUST00000238426.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	GGTCTTCTTCACTGTAGTCATTACACAGCCTTCATATTAAATGAACCATTCAATAGCTGGCTCCGGCTATaGCTTCTGGCTGTGGCTGTA	+
Preference number: 4 (lower is better) Translates to: GLLHCSHYTAFILNEPFNSWLRL*LLAVAV Trigger: TACAGCCACAGCCAGAAGCCATAGCCGGAGCCAGCT...ATTGAATGGTTCATTTAATATGAAGGCTGTGTAATGACTACAGTGAAGAAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238426.2
CDS-3UTR CCA 90 bp	TTTGGTCTTCTTCACTGTAGTCATTACACAGCCTTCATATTAAATGAACCATTCGTGGCTGTAACAGACTaGAATCCCTGCATCTCAAGA	+
Preference number: 4 (lower is better) Translates to: FGLLHCSHYTAFILNEPFVAVTD*NPCISR Trigger: TCTTGAGATGCAGGGATTCCAGTCTGTTACAGCCAC...GAATGGTTCATTTAATATGAAGGCTGTGTAATGACTACAGTGAAGAAGACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238426.2
CDS CCA 72 bp	TGTTTCTTTTTCGCTTGCGACTGCCAGGAATGTAGCTaGCTCCGGCTATGGCTTCTGGCTGTGGCTGTAACA	+
Preference number: 6 (lower is better) Translates to: CFFFACDCQECS*LRLWLLAVAVT Trigger: TGTTACAGCCACAGCCAGAAGCCATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238426.2
CDS CAA 72 bp	TATCAACATATGCCATGTGGGTGGAAAGCCAGTTGTTaGCGTGTTGTAAAAGCTGTTTCAAGGTTCCGTTCC	+
Preference number: 6 (lower is better) Translates to: YQHMPCGWKASC*RVVKAVSRFRS Trigger: GGAACGGAACCTTGAAACAGCTTTTACAACACGCAAACAACTGGCTTTCCACCCACATGGCATATGTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238426.2

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