Pregenerated sensors for BTBD35F14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078324

Ensembl transcript IDs: ENSMUST00000105117.3

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCGACTaGCAGGAATGTAGCTGGCTCCGGCTATGGCTTCTG	+
Preference number: 6 (lower is better) Translates to: PTPPNCFFFACD*QECSWLRLWLL Trigger: CAGAAGCCATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105117.3
CDS GCA 72 bp	TTGTTGCCAACTCCTCCAAACTGTTTCTTTTTCGCTTaGGACTGCCAGGAATGTAGCTGGCTCCGGCTATGG	+
Preference number: 6 (lower is better) Translates to: LLPTPPNCFFFA*DCQECSWLRLW Trigger: CCATAGCCGGAGCCAGCTACATTCCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105117.3
CDS TCA 72 bp	CGGATATGGTTGTGGCAAGCAGAACCATCACACCTCTaGCACCATTGCCTTAAAATTACACACTGCCTGGTA	+
Preference number: 6 (lower is better) Translates to: RIWLWQAEPSHL*HHCLKITHCLV Trigger: TACCAGGCAGTGTGTAATTTTAAGGCAATGGTGTCAGAGGTGTGATGGTTCTGCTTGCCACAACCATATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105117.3
CDS TCA 72 bp	TGCTGCCAAAACTTGAGGAACTTCCAGAGGTGTTATTaGCAAATCCGCATCTGTGTACAAAGCACCAAACAC	+
Preference number: 6 (lower is better) Translates to: CCQNLRNFQRCY*QIRICVQSTKH Trigger: GTGTTTGGTGCTTTGTACACAGATGCGGATTTGTCAATAACACCTCTGGAAGTTCCTCAAGTTTTGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105117.3
CDS GCA 72 bp	TCCCTGGTTTTGAGGTCCATGAACATTAGAACTTGTTaGCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCG	+
Preference number: 6 (lower is better) Translates to: SLVLRSMNIRTC*QLLQTVSFSLA Trigger: CGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAAGTTCTAATGTTCATGGACCTCAAAACCAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105117.3
CDS GCA 72 bp	AAATCCGCATCTGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATG	+
Preference number: 6 (lower is better) Translates to: KSASVYKAPNTK*RDRVSISSFLM Trigger: CATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACAGATGCGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105117.3

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