Pregenerated sensors for BTBD35F13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095934Ensembl transcript IDs: ENSMUST00000177912.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGATACATTCCCTGGTTTTGAGGTCCATGAACATTAGAACTTGTTaGCAACTCCTCCAAACTGTTTCTTTTTCGCTTGCGACTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: WIHSLVLRSMNIRTC*QLLQTVSFSLATAR Trigger: CCTGGCAGTCGCAAGCGAAAAAGAAACAGTTTGGAGGAGTTGGCAACAAGTTCTAATGTTCATGGACCTCAAAACCAGGGAATGTATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177912.2 |
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| CDS GCA 90 bp | AGTCTACTTCCTTGTAAAGTGCCACACTTGGATGTACCATCAAATTaGAAAGAAGCCATTCAAAGCATCTCGTCTTTACAGCTTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: SLLPCKVPHLDVPSN*KEAIQSISSLQLLI Trigger: GATTAAAAGCTGTAAAGACGAGATGCTTTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGGAAGTAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177912.2 |
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| CDS GCA 90 bp | GTTATTGACAAATCCGCATCTGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATGATCAGATTT | + |
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Preference number: 5 (lower is better) Translates to: VIDKSASVYKAPNTK*RDRVSISSFLMIRF Trigger: AAATCTGATCATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACAGATGCGGATTTGTCAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177912.2 |
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| CDS GCA 90 bp | AGGAACATCCATATTTTTAGTGTGGTATATACATCAATCTCCTTTTaGATGACTAGTAAGTCAGAAGACAGTGCTAGAACATACATCAAC | + |
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Preference number: 5 (lower is better) Translates to: RNIHIFSVVYTSISF*MTSKSEDSARTYIN Trigger: GTTGATGTATGTTCTAGCACTGTCTTCTGACTTACTAGTCATGCAAAAGGAGATTGATGTATATACCACACTAAAAATATGGATGTTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177912.2 |
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