Pregenerated sensors for BTBD35F11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094558

Ensembl transcript IDs: ENSMUST00000105020.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 90 bp	GAAGCAGTCACTTCTGGTGGTACTAGACTCCAAAGAATATTGAATTaGTTTTTGGTCTTCTTCACTGTAGTCATTACACAGCCTTCATAT	+
Preference number: 2 (lower is better) Translates to: EAVTSGGTRLQRILN*FLVFFTVVITQPSY Trigger: ATATGAAGGCTGTGTAATGACTACAGTGAAGAAGACCAAAAACAAATTCAATATTCTTTGGAGTCTAGTACCACCAGAAGTGACTGCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105020.2
CDS GCA 90 bp	GTTATTGACAAATCCGCATCCGTGTACAAAGCACCAAACACAAAATaGAGAGATCGGGTATCAATATCCTCATTCTTAATGATCAGATTT	+
Preference number: 5 (lower is better) Translates to: VIDKSASVYKAPNTK*RDRVSISSFLMIRF Trigger: AAATCTGATCATTAAGAATGAGGATATTGATACCCGATCTCTGCATTTTGTGTTTGGTGCTTTGTACACGGATGCGGATTTGTCAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105020.2
CDS CAA 72 bp	TCAACTTCAAGTCTACTTCCTTGTAAAGTGCCACACTaGGATGTACCATCAAATTGCAAAGAAGCCATTCAA	+
Preference number: 6 (lower is better) Translates to: STSSLLPCKVPH*DVPSNCKEAIQ Trigger: TTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGGAAGTAGACTTGAAGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105020.2

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