Pregenerated sensors for BTBD35F10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095716

Ensembl transcript IDs: ENSMUST00000178621.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TTTGTTGGAAGTAAAGGTTTTCTTCAGAAATACATGGAAATAAGGTaGTGGAGGGAAGCAGTCACTTCTGGTGGTACTAGACTCCAAAGA	+
Preference number: 1 (lower is better) Translates to: FVGSKGFLQKYMEIR*WREAVTSGGTRLQR Trigger: TCTTTGGAGTCTAGTACCACCAGAAGTGACTGCTTCCCTCCATCACCTTATTTCCATGTATTTCTGAAGAAAACCTTTACTTCCAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178621.2
CDS CCA 72 bp	CAACTTCAAGTCTACTTCCTTGTAAAGTGCCACACTTaGATGTACCATCAAATTGCAAAGAAGCCATTCAAA	+
Preference number: 6 (lower is better) Translates to: QLQVYFLVKCHT*MYHQIAKKPFK Trigger: TTTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGGAAGTAGACTTGAAGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178621.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu