Pregenerated sensors for BTBD35F1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000118459

Ensembl transcript IDs: ENSMUST00000238237.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 72 bp	CCTTGCAAATATAGTCTCTTATTTCCATTCCAAGCTTaGATCTCGATGGTAAATTTAAATCAGAAGATTAGG	+
Preference number: 3 (lower is better) Translates to: PCKYSLLFPFQA*ISMVNLNQKIR Trigger: CCTAATCTTCTGATTTAAATTTACCATCGAGATCCAAGCTTGGAATGGAAATAAGAGACTATATTTGCAAGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238237.2
CDS CCA 90 bp	CCTTCTTCACTTTCAAGAAAACTGATGTTATCAACATATGCCATGTaGGTGGAAAGCCAGTTGTTTGCGTGTTGTAAAAGCTGTTTCGTG	+
Preference number: 5 (lower is better) Translates to: PSSLSRKLMLSTYAM*VESQLFACCKSCFV Trigger: CACGAAACAGCTTTTACAACACGCAAACAACTGGCTTTCCACCCACATGGCATATGTTGATAACATCAGTTTTCTTGAAAGTGAAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238237.2
CDS GCA 90 bp	AATCTACTTCCTTGTAAAGTGCCACACTTGGATGTACCATCAAATTaGAAAGAAGCCATTCAAAGCATCTCGTCTTTACAGCTTTTAATC	+
Preference number: 5 (lower is better) Translates to: NLLPCKVPHLDVPSN*KEAIQSISSLQLLI Trigger: GATTAAAAGCTGTAAAGACGAGATGCTTTGAATGGCTTCTTTGCAATTTGATGGTACATCCAAGTGTGGCACTTTACAAGGAAGTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238237.2
CDS CAA 72 bp	TATCAACATATGCCATGTGGGTGGAAAGCCAGTTGTTaGCGTGTTGTAAAAGCTGTTTCGTGGTTCCGTTCC	+
Preference number: 6 (lower is better) Translates to: YQHMPCGWKASC*RVVKAVSWFRS Trigger: GGAACGGAACCACGAAACAGCTTTTACAACACGCAAACAACTGGCTTTCCACCCACATGGCATATGTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238237.2

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